Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
3401 | BAA01g02690 | A01 | 1248598 | G | A | downstream_gene_variant | MODIFIER | c.*2267G>A| |
S247 |
3402 | BAA01g02700 | A01 | 1253014 | G | A | splice_region_variant&intron_variant | LOW | c.2829+5C>T| |
S250 |
3403 | BAA01g02700 | A01 | 1253862 | G | A | synonymous_variant | LOW | c.1986C>T|p.Leu662Leu |
S283 |
3404 | BAA01g02700 | A01 | 1255403 | C | T | missense_variant | MODERATE | c.1258G>A|p.Asp420Asn |
S132 S137 S215 S89 |
3405 | BAA01g02700 | A01 | 1255551 | G | A | synonymous_variant | LOW | c.1110C>T|p.Phe370Phe |
S131 |
3406 | BAA01g02700 | A01 | 1255731 | G | A | synonymous_variant | LOW | c.930C>T|p.Leu310Leu |
S10 |
3407 | BAA01g02700 | A01 | 1256057 | G | A | missense_variant | MODERATE | c.604C>T|p.Leu202Phe |
S174 S265 S27 |
3408 | BAA01g02710 | A01 | 1257242 | G | A | missense_variant | MODERATE | c.314G>A|p.Gly105Glu |
S232 |
3409 | BAA01g02710 | A01 | 1257446 | G | A | missense_variant | MODERATE | c.518G>A|p.Arg173Lys |
S108 |
3410 | BAA01g02710 | A01 | 1257806 | C | T | synonymous_variant | LOW | c.696C>T|p.Arg232Arg |
S48 |
3411 | BAA01g02710 | A01 | 1258104 | G | A | missense_variant | MODERATE | c.994G>A|p.Gly332Arg |
S272 |
3412 | BAA01g02710 | A01 | 1258152 | G | A | missense_variant | MODERATE | c.1042G>A|p.Asp348Asn |
S224 |
3413 | BAA01g02710 | A01 | 1258342 | G | A | missense_variant | MODERATE | c.1232G>A|p.Gly411Asp |
S60 |
3414 | BAA01g02710 | A01 | 1258943 | C | T | missense_variant | MODERATE | c.1739C>T|p.Thr580Ile |
S192 |
3415 | BAA01g02710 | A01 | 1258965 | C | T | synonymous_variant | LOW | c.1761C>T|p.Asn587Asn |
S182 |
3416 | BAA01g02710 | A01 | 1259323 | C | T | missense_variant | MODERATE | c.2039C>T|p.Ser680Phe |
S129 |
3417 | BAA01g02710 | A01 | 1260208 | C | T | missense_variant | MODERATE | c.2924C>T|p.Ser975Phe |
S189 |
3418 | BAA01g02710 | A01 | 1260498 | G | A | missense_variant | MODERATE | c.3214G>A|p.Glu1072Lys |
S251 |
3419 | BAA01g02700 | A01 | 1261245 | G | A | upstream_gene_variant | MODIFIER | c.-4503C>T| |
S297 |
3420 | BAA01g02710 | A01 | 1261667 | G | A | stop_gained | HIGH | c.4206G>A|p.Trp1402* |
S256 |
3421 | BAA01g02730 | A01 | 1261962 | C | T | upstream_gene_variant | MODIFIER | c.-3139C>T| |
S155 S211 |
3422 | BAA01g02720 | A01 | 1262851 | G | A | synonymous_variant | LOW | c.492C>T|p.Ala164Ala |
S255 S59 S61 |
3423 | BAA01g02720 | A01 | 1262861 | C | T | missense_variant | MODERATE | c.482G>A|p.Gly161Glu |
S30 S31 |
3424 | BAA01g02720 | A01 | 1263723 | G | A | missense_variant | MODERATE | c.169C>T|p.Pro57Ser |
S187 |
3425 | BAA01g02720 | A01 | 1263835 | G | A | synonymous_variant | LOW | c.57C>T|p.His19His |
S289 S290 |