Num | GeneID | Chromosome | Position | Ref.allele | Alt.allele | Mutant type | Impacts | Amino acid change | SampleID |
---|---|---|---|---|---|---|---|---|---|
4001 | BAA01g03270 | A01 | 1478123 | C | T | upstream_gene_variant | MODIFIER | c.-3840G>A| |
S74 |
4002 | BAA01g03280 | A01 | 1478179 | C | T | synonymous_variant | LOW | c.4482G>A|p.Lys1494Lys |
S69 |
4003 | BAA01g03280 | A01 | 1478566 | C | T | stop_gained | HIGH | c.4095G>A|p.Trp1365* |
S208 |
4004 | BAA01g03280 | A01 | 1479585 | C | T | splice_region_variant&synonymous_variant | LOW | c.3498G>A|p.Thr1166Thr |
S71 |
4005 | BAA01g03280 | A01 | 1479586 | G | A | missense_variant&splice_region_variant | MODERATE | c.3497C>T|p.Thr1166Met |
S219 |
4006 | BAA01g03280 | A01 | 1479649 | C | T | missense_variant | MODERATE | c.3434G>A|p.Cys1145Tyr |
S94 |
4007 | BAA01g03280 | A01 | 1479746 | G | A | synonymous_variant | LOW | c.3337C>T|p.Leu1113Leu |
S10 |
4008 | BAA01g03280 | A01 | 1481223 | G | A | synonymous_variant | LOW | c.2379C>T|p.Phe793Phe |
S33 |
4009 | BAA01g03280 | A01 | 1481240 | C | T | missense_variant | MODERATE | c.2362G>A|p.Asp788Asn |
S38 |
4010 | BAA01g03280 | A01 | 1482854 | G | A | synonymous_variant | LOW | c.1059C>T|p.Ala353Ala |
S11 |
4011 | BAA01g03300 | A01 | 1483089 | C | T | upstream_gene_variant | MODIFIER | c.-4056C>T| |
S196 |
4012 | BAA01g03280 | A01 | 1483290 | C | T | missense_variant | MODERATE | c.863G>A|p.Gly288Asp |
S30 S31 |
4013 | BAA01g03280 | A01 | 1483321 | C | T | missense_variant | MODERATE | c.832G>A|p.Glu278Lys |
S25 |
4014 | BAA01g03280 | A01 | 1483348 | G | A | missense_variant | MODERATE | c.805C>T|p.Pro269Ser |
S294 |
4015 | BAA01g03280 | A01 | 1483378 | G | A | stop_gained | HIGH | c.775C>T|p.Gln259* |
S256 |
4016 | BAA01g03280 | A01 | 1483550 | C | T | synonymous_variant | LOW | c.603G>A|p.Ser201Ser |
S100 |
4017 | BAA01g03280 | A01 | 1484565 | C | T | upstream_gene_variant | MODIFIER | c.-413G>A| |
S117 |
4018 | BAA01g03280 | A01 | 1484870 | G | A | upstream_gene_variant | MODIFIER | c.-718C>T| |
S289 S290 |
4019 | BAA01g03290 | A01 | 1486364 | G | A | synonymous_variant | LOW | c.219C>T|p.Ser73Ser |
S116 |
4020 | BAA01g03280 | A01 | 1488404 | G | A | upstream_gene_variant | MODIFIER | c.-4252C>T| |
S271 |
4021 | BAA01g03310 | A01 | 1489923 | G | A | synonymous_variant | LOW | c.840C>T|p.Phe280Phe |
S195 |
4022 | BAA01g03320 | A01 | 1492151 | C | T | synonymous_variant | LOW | c.681G>A|p.Lys227Lys |
S129 |
4023 | BAA01g03320 | A01 | 1492997 | C | T | splice_region_variant&intron_variant | LOW | c.402+4G>A| |
S139 S302 |
4024 | BAA01g03310 | A01 | 1494173 | G | A | upstream_gene_variant | MODIFIER | c.-3263C>T| |
S107 |
4025 | BAA01g03310 | A01 | 1494385 | C | T | upstream_gene_variant | MODIFIER | c.-3475G>A| |
S40 S49 |