| PT | Enrich | Tandem genes | ATgene | Description | GO | Scattered genes | Gene number |
Tandem clusters number |
Latin name | Common name | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| - | AT3G11730 | ATFP8, ATRABD1, RABD1; ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding | GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005525|GTP binding;GO:0030742|GTP-dependent protein binding | GhM_A01G1478.1,GhM_A01G2071.1,GhM_A01G2382.1,GhM_A01G2254.1,GhM_D01G0599.1,GhM_A03G1117.1,GhM_A02G1478.1,GhM_A01G2352.1,GhM_A13G1406.1,GhM_A06G1006.1,GhM_A08G1330.1,GhM_A02G1386.1,GhM_A11G2035.1,GhM_A12G3012.1,GhM_A06G1656.1,GhM_A11G3722.1,GhM_A03G1832.1,GhM_A09G2419.1,GhM_A06G1945.1,GhM_A08G1565.1,GhM_A03G2118.1,GhM_A07G0113.1,GhM_D12G0719.1,GhM_A03G1081.1,GhM_D05G3546.1,GhM_A03G1465.1,GhM_D09G0382.1,GhM_A08G1657.1,GhM_D12G1011.1,GhM_A08G2197.1,GhM_A11G3184.1,GhM_D01G1838.1,GhM_D07G1956.1,GhM_D12G1367.1,GhM_D07G1494.1,GhM_D02G1067.1,GhM_A04G0961.1,GhM_A03G2035.1,GhM_D10G2034.1,GhM_A04G0473.1,GhM_A02G1531.1,GhM_A11G2658.1,GhM_A07G2505.1,GhM_D03G1233.1,GhM_A12G1116.1,GhM_A01G2058.1,GhM_D05G2984.1,GhM_A13G0678.1,GhM_A08G0469.1,GhM_A09G1697.1,GhM_A11G2761.1,GhM_A13G1610.1,GhM_D05G3532.1,GhM_D01G2256.1,GhM_D03G1807.1,GhM_D11G1196.1,GhM_D03G0871.1,GhM_A08G1019.1,GhM_D13G1163.1,GhM_A07G1988.1,GhM_D08G1270.1,GhM_A08G1251.1,GhM_A09G0575.1,GhM_A06G1932.1,GhM_A12G2082.1,GhM_D04G1379.1,GhM_D06G1706.1,GhM_D04G1271.1,GhM_A02G0992.1,GhM_D13G0335.1,GhM_D06G2058.1,GhM_D05G3942.1,GhM_A11G1444.1,GhM_D01G1205.1,GhM_D01G1478.1,GhM_D06G1036.1,GhM_D09G0179.1,GhM_A10G1104.1,GhM_D08G0935.1,GhM_A07G2452.1,GhM_D07G2231.1,GhM_A10G1387.1,GhM_A12G1794.1,GhM_A02G1717.1,GhM_A07G2274.1,GhM_D13G1327.1,GhM_D09G0578.1,GhM_D04G1567.1,GhM_Scaf051G201.1,GhM_D07G2704.1,GhM_D01G2132.1,GhM_D11G2535.1,GhM_D10G1677.1,GhM_D05G3002.1,GhM_D08G0708.1,GhM_D12G1718.1,GhM_D10G1676.1,GhM_D06G1588.1,GhM_D11G2775.1,GhM_D11G2909.1,GhM_D12G2553.1,GhM_A10G1444.1,GhM_A10G1241.1,GhM_D13G1637.1,GhM_D02G0820.1,GhM_D11G1781.1,GhM_A11G1486.1,GhM_A11G2455.1,GhM_D07G1098.1,GhM_D09G0519.1,GhM_D07G1746.1,GhM_D01G0446.1,GhM_A12G1437.1,GhM_A07G2210.1,GhM_D08G1272.1,GhM_D07G2151.1,GhM_A13G1589.1,GhM_A03G1093.1,GhM_D05G3576.1,GhM_D01G1616.1,GhM_D06G1820.1,GhM_D06G1460.1,GhM_A07G2273.1,GhM_A06G1665.1,GhM_A12G2458.1,GhM_A11G3723.1,GhM_A11G3155.1,GhM_A03G1541.1 | 128 | 0 | Gossypium | Cotton | |||
| - | AT3G11290||AT4G02210||AT2G24960||AT1G30140||AT5G13330||AT5G05800||AT5G10460||AT3G25160 | unknown protein||haloacid dehalogenase-like hydrolase family protein||ER lumen protein retaining receptor family protein||Rap2.6L; Rap2.6L (related to AP2 6L); DNA binding / transcription factor | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0016787|hydrolase activity;GO:0003674|molecular_function;GO:0006621|protein retention in ER lumen;GO:0005634|nucleus;GO:0004872|receptor activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016021|integral to membrane;GO:0046923|ER retention sequence binding;GO:0015031|protein transport;GO:0005575|cellular_component | GhM_A01G0566.1,GhM_A08G1384.1,GhM_A01G0726.1,GhM_D06G1313.1,GhM_A01G0780.1,GhM_A11G2675.1,GhM_A01G1282.1,GhM_A01G0727.1,GhM_A05G3909.1,GhM_A02G1132.1,GhM_A02G0526.1,GhM_A10G1738.1,GhM_A02G1157.1,GhM_D08G0706.1,GhM_A07G1209.1,GhM_D03G0881.1,GhM_A02G1164.1,GhM_A03G0983.1,GhM_A02G1444.1,GhM_A13G1705.1,GhM_A03G1632.1,GhM_D07G2021.1,GhM_A03G0751.1,GhM_A05G1243.1,GhM_A11G2058.1,GhM_A03G1984.1,GhM_A06G2039.1,GhM_A04G0711.1,GhM_A11G2640.1,GhM_A05G3216.1,GhM_A06G0560.1,GhM_A04G0870.1,GhM_A04G0354.1,GhM_D11G0308.1,GhM_A04G0945.1,GhM_A06G0260.1,GhM_A05G3794.1,GhM_D06G1262.1,GhM_A05G3848.1,GhM_A06G1633.1,GhM_A04G1047.1,GhM_D08G0984.1,GhM_A06G2147.1,GhM_A06G0664.1,GhM_A13G1377.1,GhM_A07G1751.1,GhM_D05G4032.1,GhM_A07G2562.1,GhM_A10G1637.1,GhM_A07G1253.1,GhM_A04G1307.1,GhM_A03G2054.1,GhM_D02G2083.1,GhM_D04G1792.1,GhM_D06G0659.1,GhM_A05G3946.1,GhM_A11G2827.1,GhM_A08G2383.1,GhM_D03G1143.1,GhM_A10G2111.1,GhM_A05G4364.1,GhM_D06G0968.1,GhM_D10G1131.1,GhM_A10G1900.1,GhM_A07G1326.1,GhM_A05G1170.1,GhM_A10G0608.1,GhM_A13G1095.1,GhM_A11G1275.1,GhM_A07G2236.1,GhM_A11G2826.1,GhM_D06G2108.1,GhM_D10G1130.1,GhM_D06G1605.1,GhM_A08G1206.1,GhM_A11G2257.1,GhM_A08G0648.1,GhM_A12G1821.1,GhM_A10G1596.1,GhM_D05G3210.1,GhM_D09G0473.1,GhM_D04G0854.1,GhM_D03G0863.1,GhM_D04G1751.1,GhM_D01G1826.1,GhM_D05G4093.1,GhM_D09G2647.1,GhM_D04G0566.1,GhM_D06G0969.1,GhM_A13G2129.1,GhM_D08G1201.1,GhM_A05G1466.1,GhM_D07G2465.1,GhM_A07G2563.1,GhM_D06G1445.1,GhM_D05G3496.1 | 96 | 0 | Gossypium | Cotton | |||
| TA1277:GhM_A11G2396.1,GhM_A11G2406.1;TA3463:GhM_A08G1687.1,GhM_A08G1688.1;TA2807:GhM_D13G1161.1,GhM_D13G1162.1;TA2994:GhM_A03G1078.1,GhM_A03G1079.1;TA3003:GhM_A03G1335.1,GhM_A03G1341.1;TA1383:GhM_A12G1223.1,GhM_A12G1229.1 | - | - | - | GhM_A01G1511.1,GhM_A01G1982.1,GhM_A02G1653.1,GhM_A06G1057.1,GhM_A06G1273.1,GhM_A07G1743.1,GhM_A03G1090.1,GhM_A05G3725.1,GhM_A07G1975.1,GhM_A03G1591.1,GhM_A03G1286.1,GhM_A13G1307.1,GhM_A02G1468.1,GhM_A07G2067.1,GhM_A02G1573.1,GhM_A03G1089.1,GhM_A04G0824.1,GhM_A09G0623.1,GhM_A07G2130.1,GhM_A08G1748.1,GhM_A03G0988.1,GhM_A09G0544.1,GhM_A10G1382.1,GhM_A05G4104.1,GhM_A10G1825.1,GhM_A01G1662.1,GhM_A01G1876.1,GhM_A03G1080.1,GhM_A03G1320.1,GhM_A03G1646.1,GhM_A04G0746.1,GhM_A05G3761.1,GhM_A06G1005.1,GhM_A06G1300.1,GhM_A06G1467.1,GhM_A07G1912.1,GhM_A07G1976.1,GhM_A07G2251.1,GhM_A08G1189.1,GhM_A08G1284.1,GhM_A08G1335.1,GhM_A08G1679.1,GhM_A09G0437.1,GhM_A09G0715.1,GhM_A10G1200.1,GhM_A10G1249.1,GhM_A10G1283.1,GhM_A10G1496.1,GhM_A10G1872.1,GhM_A11G2689.1,GhM_A12G0871.1,GhM_D06G1501.1,GhM_A13G1055.1,GhM_D11G2556.1,GhM_D01G1650.1,GhM_D03G0888.1,GhM_A10G1373.1,GhM_A13G1501.1,GhM_D02G1254.1,GhM_D04G1016.1,GhM_D08G1464.1,GhM_D09G0513.1,GhM_D12G1115.1,GhM_A07G1978.1,GhM_A12G1117.1,GhM_A07G2215.1,GhM_A06G1425.1,GhM_D04G0840.1,GhM_A09G0569.1,GhM_A05G3643.1,GhM_A07G2220.1,GhM_A04G0722.1,GhM_D05G3575.1,GhM_A02G1370.1,GhM_D02G1292.1,GhM_A01G1805.1 | 88 | 6 | Gossypium | Cotton | |||
| TA1598:GhM_D01G1612.1,GhM_D01G1613.1;TA2487:GhM_D10G1747.1,GhM_D10G1748.1;TA3451:GhM_A08G0985.1,GhM_A08G0993.1;TA1687:GhM_D02G1286.1,GhM_D02G1304.1;TA2259:GhM_D07G2142.1,GhM_D07G2145.1;TA1820:GhM_D04G1083.1,GhM_D04G1084.1 | - | - | - | GhM_A01G1453.1,GhM_A01G1772.1,GhM_A02G0904.1,GhM_A02G1070.1,GhM_A03G1292.1,GhM_A04G0652.1,GhM_A05G4126.1,GhM_A06G0946.1,GhM_A06G1310.1,GhM_A06G1430.1,GhM_A06G1470.1,GhM_A06G1690.1,GhM_A06G1730.1,GhM_A06G1769.1,GhM_A07G1842.1,GhM_A08G1060.1,GhM_A08G1077.1,GhM_A08G1290.1,GhM_A08G1364.1,GhM_A08G1459.1,GhM_A09G0621.1,GhM_A10G1418.1,GhM_A11G2304.1,GhM_A11G2349.1,GhM_A11G2412.1,GhM_A12G0931.1,GhM_A12G1142.1,GhM_A13G0979.1,GhM_A13G1048.1,GhM_A13G1208.1,GhM_A13G1545.1,GhM_D05G3799.1,GhM_D07G1935.1,GhM_D12G1371.1,GhM_D11G2624.1,GhM_D02G1233.1,GhM_D04G1534.1,GhM_D05G3746.1,GhM_D06G1420.1,GhM_D06G1448.1,GhM_D06G1465.1,GhM_D06G1518.1,GhM_D07G2144.1,GhM_A02G1351.1,GhM_A06G1700.1,GhM_A06G1371.1,GhM_A07G1841.1,GhM_A10G1735.1,GhM_A06G1431.1,GhM_A10G2258.1,GhM_A11G2688.1,GhM_A11G2770.1,GhM_A12G1163.1,GhM_D01G1954.1,GhM_D09G0515.1,GhM_D06G1364.1,GhM_D13G1208.1,GhM_D08G1194.1,GhM_D04G1005.1,GhM_A06G1449.1,GhM_A08G1557.1,GhM_D06G1535.1,GhM_D07G1936.1,GhM_A01G1454.1,GhM_A01G1451.1,GhM_A05G4110.1,GhM_D12G0813.1,GhM_A12G0932.1,GhM_A05G3849.1,GhM_D12G0940.1,GhM_A08G1363.1,GhM_D13G1210.1,GhM_D08G0989.1 | 85 | 6 | Gossypium | Cotton | |||
| TA1167:GhM_A10G1300.1,GhM_A10G1301.1;TA1279:GhM_A11G2580.1,GhM_A11G2581.1;TA3222:GhM_A05G4117.1,GhM_A05G4118.1;TA2154:GhM_A01G1588.1,GhM_A01G1589.1;TA1370:GhM_A12G0789.1,GhM_A12G0790.1;TA2909:GhM_A02G1319.1,GhM_A02G1323.1;TA2911:GhM_A02G1367.1,GhM_A02G1368.1;TA3277:GhM_A06G0446.1,GhM_A06G0447.1 | - | - | - | GhM_A06G1257.1,GhM_A06G1361.1,GhM_A07G1635.1,GhM_A07G2068.1,GhM_A08G1369.1,GhM_A08G1474.1,GhM_A08G1678.1,GhM_A09G0637.1,GhM_A12G0963.1,GhM_A09G0438.1,GhM_A11G2982.1,GhM_A03G1085.1,GhM_A07G0921.1,GhM_A08G1105.1,GhM_A01G1722.1,GhM_A02G1489.1,GhM_A03G1233.1,GhM_A03G1276.1,GhM_A04G0650.1,GhM_A04G0723.1,GhM_A04G0729.1,GhM_A04G0767.1,GhM_A04G0769.1,GhM_A01G1450.1,GhM_A06G0739.1,GhM_A01G1731.1,GhM_A06G1081.1,GhM_A02G1237.1,GhM_A07G2122.1,GhM_A08G1372.1,GhM_A09G0580.1,GhM_A10G1377.1,GhM_A13G1206.1,GhM_A04G0588.1,GhM_A01G1674.1,GhM_A01G1826.1,GhM_A06G0957.1,GhM_A03G1344.1,GhM_A02G1462.1,GhM_A04G0193.1,GhM_A04G0559.1,GhM_A09G0452.1,GhM_A06G1983.1,GhM_A06G1520.1,GhM_A09G0665.1,GhM_A10G1956.1,GhM_A13G1660.1,GhM_A08G1242.1,GhM_A11G2678.1,GhM_A11G2302.1,GhM_A11G2663.1,GhM_A02G0269.1,GhM_A13G2101.1,GhM_A06G1002.1,GhM_A10G1288.1,GhM_A12G0927.1,GhM_A10G1871.1,GhM_A11G2674.1,GhM_A13G1232.1,GhM_A03G1313.1,GhM_A08G1210.1,GhM_A12G1061.1,GhM_A12G1205.1,GhM_A13G0946.1,GhM_A13G1162.1,GhM_A13G1331.1,GhM_A04G0688.1,GhM_A13G1330.1 | 84 | 8 | Gossypium | Cotton | |||
| TA6:GhM_A03G2600.1,GhM_A03G2601.1,GhM_A03G2602.1,GhM_A03G2603.1,GhM_A03G2604.1,GhM_A03G2606.1,GhM_A03G2607.1,GhM_A03G2608.1,GhM_A03G2609.1,GhM_A03G2611.1,GhM_A03G2612.1,GhM_A03G2613.1,GhM_A03G2615.1,GhM_A03G2617.1,GhM_A03G2618.1,GhM_A03G2619.1,GhM_A03G2620.1,GhM_A03G2622.1;TA21:GhM_D02G2625.1,GhM_D02G2626.1,GhM_D02G2628.1,GhM_D02G2630.1,GhM_D02G2631.1,GhM_D02G2632.1,GhM_D02G2633.1,GhM_D02G2634.1,GhM_D02G2635.1,GhM_D02G2636.1,GhM_D02G2637.1,GhM_D02G2639.1,GhM_D02G2641.1;TA20:GhM_A13G1073.1,GhM_A13G1074.1,GhM_A13G1075.1,GhM_A13G1076.1,GhM_A13G1077.1,GhM_A13G1078.1,GhM_A13G1079.1,GhM_A13G1080.1,GhM_A13G1081.1,GhM_A13G1083.1,GhM_A13G1085.1,GhM_A13G1086.1,GhM_A13G1087.1;TA281:GhM_D13G1130.1,GhM_D13G1140.1,GhM_D13G1141.1,GhM_D13G1142.1,GhM_D13G1143.1;TA466:GhM_D13G1134.1,GhM_D13G1135.1,GhM_D13G1138.1,GhM_D13G1139.1;TA2806:GhM_D13G1131.1,GhM_D13G1137.1 | AT4G38840||AT4G34770||AT2G21210||AT4G34800||AT4G34810||AT2G21220||AT4G34760||AT5G18050||AT1G75580||AT5G18020 | auxin-responsive protein, putative||auxin-responsive family protein | GO:0003674|molecular_function;GO:0010200|response to chitin;GO:0009733|response to auxin stimulus;GO:0005516|calmodulin binding;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A13G1082.1,GhM_A03G2610.1,GhM_A01G1229.1,GhM_A03G2599.1,GhM_A06G0054.1,GhM_A11G2054.1,GhM_A12G0446.1,GhM_D01G1203.1,GhM_D05G2116.1,GhM_D06G0051.1,GhM_D10G0971.1,GhM_D11G2040.1,GhM_D12G0349.1,GhM_A03G2621.1,GhM_A03G2614.1,GhM_A05G3120.1,GhM_D02G2638.1,GhM_D04G2086.1,GhM_A04G1606.1 | 74 | 6 | Gossypium | Cotton | |||
| TA1375:GhM_A12G0887.1,GhM_A12G0888.1;TA3214:GhM_A05G3697.1,GhM_A05G3698.1;TA3211:GhM_A05G3657.1,GhM_A05G3668.1;TA3001:GhM_A03G1274.1,GhM_A03G1279.1;TA3071:GhM_A04G0747.1,GhM_A04G0748.1 | - | - | - | GhM_A04G0635.1,GhM_A01G1656.1,GhM_A01G1696.1,GhM_A01G1834.1,GhM_A03G1015.1,GhM_A03G1411.1,GhM_A03G1510.1,GhM_A03G1651.1,GhM_A03G1847.1,GhM_A04G0595.1,GhM_A04G0727.1,GhM_A05G3647.1,GhM_A02G1147.1,GhM_A05G3623.1,GhM_A06G1908.1,GhM_A10G1493.1,GhM_A09G0640.1,GhM_A11G2633.1,GhM_A11G2692.1,GhM_A06G0942.1,GhM_A12G0839.1,GhM_A07G2123.1,GhM_A07G2263.1,GhM_A05G4105.1,GhM_A07G2115.1,GhM_A06G1575.1,GhM_A10G1353.1,GhM_A11G2655.1,GhM_A13G1450.1,GhM_A13G1453.1,GhM_A05G3739.1,GhM_A09G0570.1,GhM_A11G2709.1,GhM_A12G1060.1,GhM_A13G0963.1,GhM_A06G1589.1,GhM_A10G1439.1,GhM_A03G1290.1,GhM_D01G1430.1,GhM_A05G4127.1,GhM_A10G1504.1,GhM_A12G1107.1,GhM_A13G1040.1,GhM_A02G1089.1,GhM_A09G0634.1,GhM_A12G0866.1,GhM_A06G1738.1,GhM_A01G1885.1,GhM_A06G1367.1,GhM_D01G1609.1,GhM_A06G1454.1 | 61 | 5 | Gossypium | Cotton | |||
| TA25:GhM_D11G3563.1,GhM_D11G3564.1,GhM_D11G3569.1,GhM_D11G3570.1,GhM_D11G3573.1,GhM_D11G3574.1,GhM_D11G3575.1,GhM_D11G3576.1,GhM_D11G3577.1,GhM_D11G3578.1,GhM_D11G3579.1,GhM_D11G3580.1,GhM_D11G3581.1;TA3095:GhM_A04G1511.1,GhM_A04G1514.1;TA710:GhM_D04G1989.1,GhM_D04G1999.1,GhM_D04G2000.1;TA288:GhM_A04G1504.1,GhM_A04G1505.1,GhM_A04G1506.1,GhM_A04G1507.1,GhM_A04G1508.1;TA147:GhM_D04G1988.1,GhM_D04G1992.1,GhM_D04G1993.1,GhM_D04G1994.1,GhM_D04G1995.1,GhM_D04G1997.1;TA344:GhM_A13G0550.1,GhM_A13G0551.1,GhM_A13G0552.1,GhM_A13G0554.1;TA166:GhM_D13G0535.1,GhM_D13G0536.1,GhM_D13G0537.1,GhM_D13G0538.1,GhM_D13G0539.1,GhM_D13G0540.1;TA209:GhM_A11G3639.1,GhM_A11G3660.1,GhM_A11G3661.1,GhM_A11G3662.1,GhM_A11G3663.1;TA647:GhM_D01G0484.1,GhM_D01G0485.1,GhM_D01G0486.1;TA2114:GhM_A01G0499.1,GhM_A01G0501.1 | AT3G14840||AT5G10530||AT1G29740||AT1G07650||AT5G65600||AT3G19690||AT4G33720||AT1G16670||AT1G53430||AT1G53440 | leucine-rich repeat transmembrane protein kinase, putative||kinase||pathogenesis-related protein, putative||lectin protein kinase, putative||legume lectin family protein / protein kinase family protein||leucine-rich repeat family protein / protein kinase family protein||protein kinase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0003674|molecular_function;GO:0006468|protein amino acid phosphorylation;GO:0005576|extracellular region;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A04G1497.1,GhM_A02G1902.1,GhM_D03G0364.1,GhM_A12G1096.1,GhM_D12G0954.1,GhM_A04G0416.1,GhM_D11G3545.1,GhM_D05G3958.1,GhM_D05G3901.1,GhM_A04G0465.1,GhM_D09G0039.1 | 60 | 10 | Gossypium | Cotton | |||
| TA87:GhM_D11G1902.1,GhM_D11G1903.1,GhM_D11G1905.1,GhM_D11G1907.1,GhM_D11G1908.1,GhM_D11G1909.1,GhM_D11G1913.1,GhM_D11G1915.1;TA204:GhM_A11G1913.1,GhM_A11G1923.1,GhM_A11G1924.1,GhM_A11G1925.1,GhM_A11G1929.1;TA205:GhM_A11G1914.1,GhM_A11G1916.1,GhM_A11G1918.1,GhM_A11G1931.1,GhM_A11G1932.1;TA1271:GhM_A11G2029.1,GhM_A11G2030.1;TA2170:GhM_A01G2077.1,GhM_A01G2078.1;TA1608:GhM_D01G2044.1,GhM_D01G2045.1;TA2146:GhM_A01G1213.1,GhM_A01G1215.1;TA1593:GhM_D01G1185.1,GhM_D01G1187.1;TA3166:GhM_A05G2079.1,GhM_A05G2080.1;TA726:GhM_D05G2095.1,GhM_D05G2097.1,GhM_D05G2100.1;TA3257:GhM_A06G0034.1,GhM_A06G0035.1;TA2003:GhM_D06G0029.1,GhM_D06G0030.1;TA2600:GhM_D11G2014.1,GhM_D11G2017.1;TA1267:GhM_A11G1919.1,GhM_A11G1920.1;TA2594:GhM_D11G1906.1,GhM_D11G1910.1 | AT1G66920||AT1G67000||AT3G12500||AT5G38210||AT5G38280||AT5G38260||AT1G66930||AT4G18250||AT1G66880||AT1G67025||AT4G38660||AT4G36010||AT4G38670||AT1G20030||AT1G75800||AT1G25390 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||receptor serine/threonine kinase, putative||thaumatin, putative||serine/threonine protein kinase family protein||PR5K; PR5K; kinase/ transmembrane receptor protein serine/threonine kinase||pathogenesis-related thaumatin family protein||ATHCHIB, PR3, PR-3, CHI-B, B-CHI; ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase||serine/threonine protein kinase, putative||protein kinase family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase (TAIR:AT1G18390.1); Has 101 Blast hits to 88 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0046686|response to cadmium ion;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity;GO:0051707|response to other organism;GO:0008150|biological_process;GO:0004568|chitinase activity;GO:0016301|kinase activity;GO:0050832|defense response to fungus;GO:0005773|vacuole;GO:0004672|protein kinase activity;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway;GO:0012505|endomembrane system;GO:0009620|response to fungus;GO:0004713|protein tyrosine kinase activity;GO:0003674|molecular_function;GO:0031225|anchored to membrane;GO:0005524|ATP binding | GhM_A01G0536.1,GhM_D09G0824.1,GhM_A12G0418.1,GhM_D12G0376.1,GhM_A02G1063.1,GhM_D02G1098.1,GhM_A03G2641.1,GhM_A12G0670.1,GhM_D02G2660.1,GhM_D12G0670.1,GhM_A02G2182.1,GhM_A11G0518.1,GhM_D03G0089.1,GhM_D11G0501.1,GhM_A11G1983.1,GhM_D11G1971.1 | 59 | 15 | Gossypium | Cotton | |||
| TA15:GhM_A11G3538.1,GhM_A11G3542.1,GhM_A11G3547.1,GhM_A11G3548.1,GhM_A11G3549.1,GhM_A11G3550.1,GhM_A11G3551.1,GhM_A11G3552.1,GhM_A11G3553.1,GhM_A11G3554.1,GhM_A11G3557.1,GhM_A11G3558.1,GhM_A11G3561.1,GhM_A11G3578.1,GhM_A11G3582.1;TA30:GhM_D11G3458.1,GhM_D11G3460.1,GhM_D11G3462.1,GhM_D11G3463.1,GhM_D11G3464.1,GhM_D11G3465.1,GhM_D11G3466.1,GhM_D11G3467.1,GhM_D11G3468.1,GhM_D11G3470.1,GhM_D11G3473.1,GhM_D11G3474.1;TA1322:GhM_A11G3541.1,GhM_A11G3543.1;TA274:GhM_D11G3675.1,GhM_D11G3677.1,GhM_D11G3679.1,GhM_D11G3687.1,GhM_D11G3689.1;TA335:GhM_A11G3754.1,GhM_A11G3756.1,GhM_A11G3757.1,GhM_A11G3759.1;TA2663:GhM_D11G3718.1,GhM_D11G3721.1;TA135:GhM_A11G3753.1,GhM_A11G3755.1,GhM_A11G3758.1,GhM_A11G3764.1,GhM_A11G3767.1,GhM_A11G3769.1 | AT5G45060||AT5G17680||AT4G12010||AT5G54440||AT2G17050||AT5G36930||AT5G46260||AT5G41550||AT1G72950||AT4G16990||AT4G08450||AT1G72840||AT5G38350 | disease resistance protein (TIR-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative||ATP binding / protein binding / transmembrane receptor||disease resistance protein (TIR-NBS class), putative||unknown protein||RLM3; RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3); ATP binding / transmembrane receptor | GO:0008150|biological_process;GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0045087|innate immune response;GO:0006915|apoptosis;GO:0006952|defense response;GO:0007165|signal transduction;GO:0009817|defense response to fungus, incompatible interaction;GO:0052542|callose deposition during defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A01G0709.1,GhM_A11G3555.1,GhM_D11G3477.1,GhM_D01G0676.1,GhM_Scaf193G320.1,GhM_A11G3500.1,GhM_A11G3806.1,GhM_D11G3494.1,GhM_D11G3676.1 | 55 | 7 | Gossypium | Cotton | |||
| TA83:GhM_D06G1545.1,GhM_D06G1546.1,GhM_D06G1552.1,GhM_D06G1553.1,GhM_D06G1554.1,GhM_D06G1556.1,GhM_D06G1557.1,GhM_D06G1558.1;TA97:GhM_A06G1526.1,GhM_A06G1528.1,GhM_A06G1529.1,GhM_A06G1530.1,GhM_A06G1541.1,GhM_A06G1544.1,GhM_A06G1545.1,GhM_A06G1546.1;TA365:GhM_D02G1674.1,GhM_D02G1675.1,GhM_D02G1676.1,GhM_D02G1677.1;TA308:GhM_A09G0967.1,GhM_A09G0968.1,GhM_A09G0969.1,GhM_A09G0970.1,GhM_A09G0971.1;TA119:GhM_D09G0899.1,GhM_D09G0900.1,GhM_D09G0901.1,GhM_D09G0904.1,GhM_D09G0905.1,GhM_D09G0906.1,GhM_D09G0907.1;TA3299:GhM_A06G1532.1,GhM_A06G1536.1;TA101:GhM_A10G0177.1,GhM_A10G0178.1,GhM_A10G0179.1,GhM_A10G0180.1,GhM_A10G0181.1,GhM_A10G0182.1,GhM_A10G0183.1;TA434:GhM_D10G0165.1,GhM_D10G0168.1,GhM_D10G0170.1,GhM_D10G0171.1;TA3298:GhM_A06G1531.1,GhM_A06G1535.1;TA850:GhM_D10G0166.1,GhM_D10G0167.1,GhM_D10G0169.1 | AT4G23220||AT4G23160||AT4G11530||AT4G11460||AT4G38830||AT4G21410||AT4G05200||AT4G23210||AT4G23180||AT4G23150||AT4G21390||AT1G65790||AT4G23230||AT4G03230 | kinase||ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||CRK13; protein kinase family protein||ARK1; ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase||B120; B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding||protein kinase family protein||CRK10, RLK4; CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0002237|response to molecule of bacterial origin;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0019199|transmembrane receptor protein kinase activity;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity;GO:0009626|plant-type hypersensitive response;GO:0016301|kinase activity;GO:0016020|membrane;GO:0048544|recognition of pollen;GO:0005773|vacuole;GO:0004672|protein kinase activity;GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004713|protein tyrosine kinase activity;GO:0005634|nucleus;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A06G1527.1,GhM_A09G0957.1,GhM_D09G0888.1,GhM_D05G4075.1 | 54 | 10 | Gossypium | Cotton | |||
| - | AT5G60860||AT5G45750||AT1G09630||AT5G59150||AT1G28550||AT2G33870 | ATRABA2D, ATRAB-A2D; ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding||AtRABA1f; AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding||ArRABA1h; ArRABA1h (Arabidopsis Rab GTPase homolog A1h); GTP binding||AtRABA1c; AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding||AtRABA1i; AtRABA1i (Arabidopsis Rab GTPase homolog A1i); GTP binding||ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A; ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding | GO:0005525|GTP binding;GO:0000910|cytokinesis;GO:0005634|nucleus;GO:0005768|endosome;GO:0009504|cell plate;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005773|vacuole | GhM_A01G0619.1,GhM_D01G0581.1,GhM_A04G0373.1,GhM_D05G3995.1,GhM_A05G1724.1,GhM_D05G1734.1,GhM_A06G1727.1,GhM_A03G2787.1,GhM_D02G2793.1,GhM_A05G1014.1,GhM_D05G1028.1,GhM_A05G3460.1,GhM_D05G3425.1,GhM_A05G4161.1,GhM_D04G0768.1,GhM_A06G2168.1,GhM_A07G1214.1,GhM_D07G1197.1,GhM_A08G0076.1,GhM_D08G0061.1,GhM_A10G2848.1,GhM_D10G2816.1,GhM_A12G0496.1,GhM_D12G0490.1,GhM_A13G1991.1,GhM_D13G1891.1,GhM_A06G1760.1,GhM_D06G1690.1,GhM_A06G2552.1,GhM_D06G2545.1,GhM_A06G2568.1,GhM_D06G2561.1,GhM_A10G0314.1,GhM_D10G0299.1,GhM_A10G0373.1,GhM_D10G0361.1,GhM_D06G1740.1,GhM_A13G1990.1,GhM_D02G1867.1,GhM_D05G3750.1,GhM_D03G0503.1,GhM_D06G2067.1,GhM_D03G0770.1,GhM_D06G1117.1,GhM_D05G1975.1,GhM_D07G1851.1,GhM_D06G0739.1,GhM_D10G1475.1,GhM_D06G1744.1,GhM_D13G0986.1,GhM_D10G0943.1,GhM_D13G2449.1,GhM_D12G0786.1 | 53 | 0 | Gossypium | Cotton | |||
| TA1491:GhM_A13G1287.1,GhM_A13G1289.1;TA1493:GhM_A13G1310.1,GhM_A13G1312.1 | AT2G22740 | SUVH6; SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0008168|methyltransferase activity;GO:0010429|methyl-CpNpN binding;GO:0016571|histone methylation;GO:0008327|methyl-CpG binding | GhM_A03G1179.1,GhM_A06G0683.1,GhM_A06G1577.1,GhM_A08G1221.1,GhM_A11G2993.1,GhM_A12G0933.1,GhM_A12G1201.1,GhM_A13G1039.1,GhM_A12G1077.1,GhM_A12G1953.1,GhM_A13G1270.1,GhM_A05G3651.1,GhM_A01G1770.1,GhM_A01G1457.1,GhM_A02G1343.1,GhM_A04G0712.1,GhM_A06G1336.1,GhM_A06G1366.1,GhM_A09G0482.1,GhM_A10G1362.1,GhM_A13G0954.1,GhM_A01G1916.1,GhM_A02G1454.1,GhM_A13G1454.1,GhM_A03G1462.1,GhM_A04G0704.1,GhM_A09G0632.1,GhM_A09G0506.1,GhM_A11G2660.1,GhM_A01G1452.1,GhM_A03G1123.1,GhM_A04G0728.1,GhM_A07G2247.1,GhM_A10G1395.1,GhM_A10G1587.1,GhM_A12G1157.1,GhM_A13G1288.1,GhM_A07G1979.1,GhM_A08G1163.1,GhM_A13G1203.1,GhM_A03G1321.1,GhM_A03G1282.1,GhM_A03G1556.1,GhM_A04G0634.1,GhM_A08G0998.1,GhM_A10G1414.1,GhM_A11G2365.1 | 51 | 2 | Gossypium | Cotton | |||
| TA13:GhM_D11G2958.1,GhM_D11G2963.1,GhM_D11G2964.1,GhM_D11G2965.1,GhM_D11G2966.1,GhM_D11G2967.1,GhM_D11G2968.1,GhM_D11G2969.1,GhM_D11G2970.1,GhM_D11G2971.1,GhM_D11G2973.1,GhM_D11G2974.1,GhM_D11G2977.1,GhM_D11G2978.1,GhM_D11G2979.1,GhM_D11G2980.1;TA636:GhM_A13G2221.1,GhM_A13G2224.1,GhM_A13G2228.1;TA168:GhM_D13G2106.1,GhM_D13G2109.1,GhM_D13G2110.1,GhM_D13G2111.1,GhM_D13G2113.1,GhM_D13G2117.1;TA19:GhM_A11G3033.1,GhM_A11G3038.1,GhM_A11G3039.1,GhM_A11G3040.1,GhM_A11G3041.1,GhM_A11G3042.1,GhM_A11G3043.1,GhM_A11G3044.1,GhM_A11G3045.1,GhM_A11G3046.1,GhM_A11G3048.1,GhM_A11G3049.1,GhM_A11G3051.1;TA3382:GhM_A07G1671.1,GhM_A07G1672.1 | AT5G38940||AT5G39110||AT3G05950||AT5G39100||AT5G39130||AT5G39120||AT5G38960||AT5G39190 | germin-like protein, putative||manganese ion binding / nutrient reservoir||GLP6; GLP6 (GERMIN-LIKE PROTEIN 6); manganese ion binding / nutrient reservoir||GLP2A, ATGER2, GER2; GER2 (GERMIN-LIKE PROTEIN 2); oxalate oxidase | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0030145|manganese ion binding;GO:0031012|extracellular matrix;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity;GO:0005618|cell wall | GhM_A11G3035.1,GhM_A13G2229.1,GhM_D13G2437.1,GhM_D13G2436.1,GhM_A02G1810.1,GhM_D03G0538.1,GhM_D10G0673.1,GhM_D12G2086.1,GhM_D13G2107.1,GhM_D11G2960.1 | 50 | 5 | Gossypium | Cotton | |||
| - | AT5G05800 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2876.1,GhM_D08G1726.1,GhM_A02G1374.1,GhM_A03G1516.1,GhM_A08G0808.1,GhM_A04G0451.1,GhM_A03G1428.1,GhM_A09G1495.1,GhM_A12G1089.1,GhM_A07G2347.1,GhM_A05G4076.1,GhM_D04G0897.1,GhM_A09G1996.1,GhM_A06G1305.1,GhM_D11G1985.1,GhM_A06G2064.1,GhM_A09G0608.1,GhM_A07G1750.1,GhM_A07G1516.1,GhM_D02G2222.1,GhM_A04G0450.1,GhM_D06G1498.1,GhM_A12G1088.1,GhM_D02G1496.1,GhM_D13G1023.1,GhM_D04G0741.1,GhM_D02G0897.1,GhM_D12G2737.1,GhM_A08G1003.1,GhM_D02G0680.1,GhM_A08G1219.1,GhM_A13G0930.1,GhM_D08G1876.1,GhM_D01G0417.1,GhM_A10G1967.1,GhM_D02G2221.1,GhM_D03G0314.1,GhM_D08G1900.1,GhM_D03G0975.1,GhM_D05G0305.1,GhM_D10G2020.1,GhM_D06G1584.1,GhM_D06G1862.1,GhM_D05G3865.1,GhM_A02G1375.1,GhM_D12G0879.1,GhM_D04G1165.1 | 47 | 0 | Gossypium | Cotton | |||
| TA1421:GhM_A12G2420.1,GhM_A12G2423.1 | AT1G78890 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G0973.1,GhM_A02G1235.1,GhM_A04G1237.1,GhM_A05G3905.1,GhM_A06G1315.1,GhM_A08G0314.1,GhM_A08G1715.1,GhM_A09G0585.1,GhM_A10G1384.1,GhM_A10G1685.1,GhM_A10G2388.1,GhM_A11G0354.1,GhM_A12G1124.1,GhM_A03G1893.1,GhM_D04G1678.1,GhM_A07G2197.1,GhM_A13G1172.1,GhM_D11G3720.1,GhM_A04G0751.1,GhM_A13G0724.1,GhM_A12G0848.1,GhM_A06G1823.1,GhM_D10G2296.1,GhM_D04G1221.1,GhM_A01G1979.1,GhM_A08G1944.1,GhM_A03G2215.1,GhM_A03G1030.1,GhM_D02G0462.1,GhM_A08G1874.1,GhM_D04G1074.1,GhM_A13G0953.1,GhM_A13G0984.1,GhM_A13G1405.1,GhM_D02G0998.1,GhM_A06G1392.1,GhM_A10G1302.1,GhM_A10G2139.1,GhM_A11G3716.1,GhM_A02G1482.1,GhM_D11G2408.1,GhM_D02G1752.1,GhM_D05G3523.1,GhM_D12G0820.1 | 46 | 1 | Gossypium | Cotton | |||
| TA11:GhM_D01G0332.1,GhM_D01G0333.1,GhM_D01G0334.1,GhM_D01G0335.1,GhM_D01G0336.1,GhM_D01G0338.1,GhM_D01G0339.1,GhM_D01G0340.1,GhM_D01G0342.1,GhM_D01G0343.1,GhM_D01G0344.1,GhM_D01G0345.1,GhM_D01G0346.1,GhM_D01G0347.1,GhM_D01G0348.1,GhM_D01G0349.1;TA396:GhM_A01G0349.1,GhM_A01G0352.1,GhM_A01G0354.1,GhM_A01G0356.1;TA395:GhM_A01G0348.1,GhM_A01G0353.1,GhM_A01G0355.1,GhM_A01G0357.1;TA2045:GhM_D06G1568.1,GhM_D06G1573.1;TA3300:GhM_A06G1553.1,GhM_A06G1556.1;TA3301:GhM_A06G1560.1,GhM_A06G1564.1;TA1128:GhM_A10G0202.1,GhM_A10G0203.1 | AT1G11350||AT1G11300||AT1G11330||AT1G11410||AT4G03230||AT4G21380||AT4G21390||AT1G11340 | S-locus lectin protein kinase family protein||ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||ARK3; ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase||ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||B120; B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding||CBRLK1, SD1-13, RKS2; SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase||S-locus protein kinase, putative | GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0005773|vacuole;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A08G2861.1,GhM_D08G2804.1,GhM_A01G2415.1,GhM_A05G4154.1,GhM_A06G1554.1,GhM_A06G1555.1,GhM_A08G3223.1,GhM_A06G1563.1,GhM_D06G1570.1,GhM_A06G2605.1,GhM_D10G0193.1,GhM_A09G0974.1,GhM_D06G2597.1 | 45 | 7 | Gossypium | Cotton | |||
| TA46:GhM_D09G0198.1,GhM_D09G0199.1,GhM_D09G0206.1,GhM_D09G0207.1,GhM_D09G0208.1,GhM_D09G0209.1,GhM_D09G0210.1,GhM_D09G0213.1,GhM_D09G0214.1,GhM_D09G0215.1;TA98:GhM_A09G0211.1,GhM_A09G0212.1,GhM_A09G0214.1,GhM_A09G0220.1,GhM_A09G0222.1,GhM_A09G0226.1,GhM_A09G0230.1,GhM_A09G0232.1;TA524:GhM_A09G0213.1,GhM_A09G0219.1,GhM_A09G0221.1,GhM_A09G0225.1;TA315:GhM_A10G1647.1,GhM_A10G1649.1,GhM_A10G1650.1,GhM_A10G1651.1;TA2479:GhM_D10G1482.1,GhM_D10G1487.1;TA949:GhM_A02G0175.1,GhM_A02G0176.1,GhM_A02G0177.1;TA109:GhM_D02G0180.1,GhM_D02G0181.1,GhM_D02G0182.1,GhM_D02G0183.1,GhM_D02G0184.1,GhM_D02G0185.1,GhM_D02G0186.1;TA2882:GhM_A02G0289.1,GhM_A02G0290.1 | AT1G16130||AT1G16120||AT1G16260||AT1G16090||AT1G69730||AT1G79670||AT1G19390 | RFO1, WAKL22; RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase||WAKL2; WAKL2 (wall associated kinase-like 2); kinase||WAKL1; WAKL1 (wall associated kinase-like 1); kinase||WAKL7; WAKL7 (wall associated kinase-like 7); protein serine/threonine kinase||wall-associated kinase, putative||protein kinase family protein | GO:0012505|endomembrane system;GO:0009620|response to fungus;GO:0006468|protein amino acid phosphorylation;GO:0005618|cell wall;GO:0016301|kinase activity;GO:0016021|integral to membrane;GO:0004674|protein serine/threonine kinase activity | GhM_A10G1648.1,GhM_D10G1483.1,GhM_D10G1484.1,GhM_D10G2304.1,GhM_D02G0313.1 | 45 | 8 | Gossypium | Cotton | |||
| TA18:GhM_A02G0260.1,GhM_A02G0261.1,GhM_A02G0262.1,GhM_A02G0263.1,GhM_A02G0264.1,GhM_A02G0265.1,GhM_A02G0266.1,GhM_A02G0267.1,GhM_A02G0268.1,GhM_A02G0270.1,GhM_A02G0271.1,GhM_A02G0272.1,GhM_A02G0273.1,GhM_A02G0274.1,GhM_A02G0275.1;TA143:GhM_D02G0290.1,GhM_D02G0292.1,GhM_D02G0293.1,GhM_D02G0295.1,GhM_D02G0297.1,GhM_D02G0298.1;TA936:GhM_D13G0976.1,GhM_D13G0977.1,GhM_D13G0978.1;TA345:GhM_A13G0674.1,GhM_A13G0677.1,GhM_A13G0679.1,GhM_A13G0681.1;TA931:GhM_D13G0406.1,GhM_D13G0407.1,GhM_D13G0411.1;TA1866:GhM_D04G2370.1,GhM_D04G2371.1;TA1011:GhM_A04G1899.1,GhM_A04G1900.1,GhM_A04G1901.1;TA540:GhM_A10G1522.1,GhM_A10G1524.1,GhM_A10G1525.1;TA2482:GhM_D10G1591.1,GhM_D10G1595.1 | AT2G26710||AT4G27710||AT3G14630||AT3G14680||AT3G14640||AT3G14690||AT3G14610||AT2G46960||AT3G14620 | CYP72A15; CYP72A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A10; CYP72A10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A7; CYP72A7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP709B1; CYP709B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A8; CYP72A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||BAS1, CYP734A1, CYP72B1; BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1); oxygen binding / steroid hydroxylase||CYP72A14; CYP72A14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP709B3; CYP709B3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A9; CYP72A9; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0009741|response to brassinosteroid stimulus;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0009416|response to light stimulus;GO:0019825|oxygen binding;GO:0005506|iron ion binding;GO:0010268|brassinosteroid homeostasis;GO:0008395|steroid hydroxylase activity;GO:0016131|brassinosteroid metabolic process;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A02G0233.1,GhM_D02G0291.1,GhM_D07G2327.1,GhM_A13G1029.1 | 45 | 9 | Gossypium | Cotton | |||
| TA41:GhM_D01G0392.1,GhM_D01G0396.1,GhM_D01G0397.1,GhM_D01G0398.1,GhM_D01G0399.1,GhM_D01G0408.1,GhM_D01G0412.1,GhM_D01G0414.1,GhM_D01G0415.1,GhM_D01G0416.1;TA153:GhM_A01G0406.1,GhM_A01G0409.1,GhM_A01G0410.1,GhM_A01G0412.1,GhM_A01G0425.1,GhM_A01G0428.1;TA894:GhM_D11G3607.1,GhM_D11G3608.1,GhM_D11G3609.1;TA1328:GhM_A11G3687.1,GhM_A11G3688.1;TA257:GhM_D09G0657.1,GhM_D09G0659.1,GhM_D09G0660.1,GhM_D09G0665.1,GhM_D09G0666.1;TA1109:GhM_A09G0709.1,GhM_A09G0711.1,GhM_A09G0716.1;TA3527:GhM_A09G0719.1,GhM_A09G0721.1;TA3200:GhM_A05G3280.1,GhM_A05G3281.1;TA1961:GhM_D05G3262.1,GhM_D05G3263.1;TA2110:GhM_A01G0408.1,GhM_A01G0411.1 | AT1G66910||AT5G38280||AT5G38240||AT4G18250||AT5G39020||AT5G38250||AT5G38260||AT1G66920||AT1G66880||AT1G18390 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||receptor serine/threonine kinase, putative||serine/threonine protein kinase family protein||PR5K; PR5K; kinase/ transmembrane receptor protein serine/threonine kinase||protein kinase, putative||serine/threonine protein kinase, putative||protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0009620|response to fungus;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G3273.1,GhM_D05G3254.1,GhM_D03G0255.1,GhM_A09G0022.1,GhM_D09G0661.1,GhM_A09G0714.1,GhM_A09G0720.1 | 44 | 10 | Gossypium | Cotton | |||
| TA63:GhM_A04G0074.1,GhM_A04G0075.1,GhM_A04G0076.1,GhM_A04G0077.1,GhM_A04G0078.1,GhM_A04G0079.1,GhM_A04G0080.1,GhM_A04G0081.1,GhM_A04G0082.1;TA113:GhM_D05G4324.1,GhM_D05G4325.1,GhM_D05G4327.1,GhM_D05G4328.1,GhM_D05G4329.1,GhM_D05G4330.1,GhM_D05G4331.1;TA3201:GhM_A05G3300.1,GhM_A05G3303.1;TA1963:GhM_D05G3288.1,GhM_D05G3289.1;TA1219:GhM_A10G2922.1,GhM_A10G2923.1;TA789:GhM_A01G2057.1,GhM_A01G2059.1,GhM_A01G2060.1;TA658:GhM_D01G2027.1,GhM_D01G2029.1,GhM_D01G2037.1;TA2117:GhM_A01G0521.1,GhM_A01G0523.1;TA896:GhM_D11G3628.1,GhM_D11G3630.1,GhM_D11G3631.1;TA210:GhM_A11G3703.1,GhM_A11G3707.1,GhM_A11G3708.1,GhM_A11G3709.1,GhM_A11G3713.1 | AT2G21110||AT5G04460||AT4G38700||AT5G49030 | disease resistance-responsive family protein||protein binding / zinc ion binding||OVA2; OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/ catalytic/ isoleucine-tRNA ligase/ nucleotide binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004812|aminoacyl-tRNA ligase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0004822|isoleucine-tRNA ligase activity;GO:0006952|defense response;GO:0006418|tRNA aminoacylation for protein translation;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0048481|ovule development | GhM_A01G0463.1,GhM_D01G0450.1,GhM_D10G2885.1,GhM_A01G0522.1,GhM_A01G2067.1,GhM_D01G2032.1 | 44 | 10 | Gossypium | Cotton | |||
| TA3002:GhM_A03G1332.1,GhM_A03G1333.1;TA3223:GhM_A05G4131.1,GhM_A05G4132.1 | - | - | - | GhM_A01G1455.1,GhM_A02G1091.1,GhM_A02G1378.1,GhM_A02G1477.1,GhM_A03G0519.1,GhM_A13G0724.1,GhM_A03G1473.1,GhM_A10G2134.1,GhM_A13G0734.1,GhM_A13G0845.1,GhM_A13G2098.1,GhM_A06G1246.1,GhM_A09G0227.1,GhM_D13G1547.1,GhM_A06G1683.1,GhM_A08G1091.1,GhM_A10G1358.1,GhM_A07G1644.1,GhM_A11G2413.1,GhM_A04G0705.1,GhM_A04G1101.1,GhM_A05G4115.1,GhM_A09G0565.1,GhM_A10G1261.1,GhM_A12G1125.1,GhM_D04G1100.1,GhM_D04G1272.1,GhM_A06G1026.1,GhM_A06G1629.1,GhM_A08G1250.1,GhM_A08G1714.1,GhM_A08G2242.1,GhM_A10G1069.1,GhM_D06G0704.1,GhM_D06G1821.1,GhM_D07G1854.1,GhM_D13G1518.1,GhM_Scaf001G036.1,GhM_A01G2104.1,GhM_D07G2412.1 | 44 | 2 | Gossypium | Cotton | |||
| - | AT4G23940||AT4G32880||AT3G58500||AT1G77470||AT3G60740||AT1G52150||AT5G46560||AT2G44530||AT1G04020 | TTN1, EMB133, TFC D, CHO; TTN1 (TITAN 1); tubulin binding||ATHB-15, ATHB15, CNA, ICU4; ATHB-15; DNA binding / transcription factor||ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative||ATHB-8, ATHB8; ATHB-8 (HOMEOBOX GENE 8); DNA binding / transcription factor||replication factor C 36 kDA, putative||unknown protein||FtsH protease, putative||PP2A-3, EP7; PP2A-3 (PROTEIN PHOSPHATASE 2A-3); protein serine/threonine phosphatase||ATBARD1, BARD1; BARD1 (BREAST CANCER ASSOCIATED RING 1); DNA binding / transcription coactivator | GO:0000287|magnesium ion binding;GO:0010072|primary shoot apical meristem specification;GO:0009855|determination of bilateral symmetry;GO:0009733|response to auxin stimulus;GO:0010067|procambium histogenesis;GO:0009887|organ morphogenesis;GO:0006281|DNA repair;GO:0048263|determination of dorsal identity;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0045597|positive regulation of cell differentiation;GO:0006508|proteolysis;GO:0004722|protein serine/threonine phosphatase activity;GO:0031348|negative regulation of defense response;GO:0007021|tubulin complex assembly;GO:0008150|biological_process;GO:0006470|protein amino acid dephosphorylation;GO:0010073|meristem maintenance;GO:0009934|regulation of meristem structural organization;GO:0005730|nucleolus;GO:0010014|meristem initiation;GO:0003689|DNA clamp loader activity;GO:0017111|nucleoside-triphosphatase activity;GO:0009965|leaf morphogenesis;GO:0008284|positive regulation of cell proliferation;GO:0009793|embryonic development ending in seed dormancy;GO:0005663|DNA replication factor C complex;GO:0005737|cytoplasm;GO:0003713|transcription coactivator activity;GO:0009116|nucleoside metabolic process;GO:0003700|transcription factor activity;GO:0048366|leaf development;GO:0007017|microtubule-based process;GO:0010089|xylem development;GO:0010075|regulation of meristem growth;GO:0008270|zinc ion binding;GO:0000159|protein phosphatase type 2A complex;GO:0009507|chloroplast;GO:0000910|cytokinesis;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0009156|ribonucleoside monophosphate biosynthetic process;GO:0015631|tubulin binding;GO:0006457|protein folding;GO:0005622|intracellular;GO:0009543|chloroplast thylakoid lumen;GO:0016887|ATPase activity;GO:0010087|phloem or xylem histogenesis;GO:0005524|ATP binding;GO:0044249|cellular biosynthetic process | GhM_A01G1011.1,GhM_A02G0869.1,GhM_A06G0996.1,GhM_A02G1635.1,GhM_A08G1013.1,GhM_A03G1954.1,GhM_A02G1605.1,GhM_A01G1252.1,GhM_A10G1233.1,GhM_A06G1364.1,GhM_A05G2649.1,GhM_D05G2660.1,GhM_A06G1735.1,GhM_A12G1003.1,GhM_A06G1734.1,GhM_A05G0507.1,GhM_D05G0529.1,GhM_A05G1460.1,GhM_D05G1474.1,GhM_A06G1116.1,GhM_D06G1130.1,GhM_A07G0292.1,GhM_D07G0294.1,GhM_D09G0722.1,GhM_D07G0846.1,GhM_D07G1584.1,GhM_D08G2341.1,GhM_D11G3405.1,GhM_A13G1637.1,GhM_A08G0990.1,GhM_A03G1199.1,GhM_A04G0761.1,GhM_A04G0985.1,GhM_A08G1439.1,GhM_D08G1424.1,GhM_A05G4456.1,GhM_A12G1225.1,GhM_A08G1374.1,GhM_A03G0986.1,GhM_A07G1482.1,GhM_A13G1401.1,GhM_A06G1937.1 | 42 | 0 | Gossypium | Cotton | |||
| - | AT1G40087||AT5G39040||AT5G62190||AT3G30200 | ATTAP2, TAP2; ATTAP2; ATPase, coupled to transmembrane movement of substances / transporter||PRH75; PRH75; ATP-dependent helicase/ DEAD/H-box RNA helicase binding||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40087.1); Has 94 Blast hits to 94 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30200.1); Has 103 Blast hits to 103 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0016070|RNA metabolic process;GO:0017151|DEAD/H-box RNA helicase binding;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0000325|plant-type vacuole;GO:0010044|response to aluminum ion;GO:0005730|nucleolus;GO:0008026|ATP-dependent helicase activity;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0005215|transporter activity;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A01G2417.1,GhM_A12G1691.1,GhM_A01G2590.1,GhM_A06G1643.1,GhM_A10G1532.1,GhM_A01G2591.1,GhM_A02G1785.1,GhM_A02G1204.1,GhM_A07G1918.1,GhM_A03G0699.1,GhM_A13G0868.1,GhM_D10G1995.1,GhM_A05G3907.1,GhM_A11G1953.1,GhM_A06G1645.1,GhM_A05G4151.1,GhM_A04G0641.1,GhM_A06G1210.1,GhM_A10G2448.1,GhM_A07G1917.1,GhM_A05G4152.1,GhM_A12G1410.1,GhM_A06G1644.1,GhM_A10G1533.1,GhM_D10G1250.1,GhM_A10G1993.1,GhM_A11G1954.1,GhM_D06G1132.1,GhM_A08G1394.1,GhM_A12G1409.1,GhM_A08G0680.1,GhM_D13G1070.1,GhM_A08G1395.1,GhM_A10G1992.1,GhM_A12G1408.1,GhM_A10G2449.1,GhM_A11G3006.1,GhM_A13G1712.1,GhM_D01G1667.1,GhM_D11G2541.1,GhM_A08G3221.1,GhM_A10G1994.1 | 42 | 0 | Gossypium | Cotton | |||
| TA1284:GhM_A11G2684.1,GhM_A11G2685.1;TA2952:GhM_A03G0002.1,GhM_A03G0003.1;TA3606:GhM_Scaf015G125.1,GhM_Scaf015G126.1;TA3605:GhM_Scaf010G117.1,GhM_Scaf010G119.1;TA2198:GhM_A01G2870.1,GhM_A01G2873.1 | ATMG00860 | ORF158; hypothetical protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2872.1,GhM_Scaf010G118.1,GhM_A02G1380.1,GhM_A01G2874.1,GhM_A03G0001.1,GhM_A03G1076.1,GhM_A03G1182.1,GhM_A05G3869.1,GhM_A07G2416.1,GhM_A10G1435.1,GhM_A11G2683.1,GhM_D10G0001.1,GhM_Scaf001G015.1,GhM_Scaf005G088.1,GhM_Scaf166G302.1,GhM_Scaf095G243.1,GhM_Scaf095G244.1,GhM_Scaf058G210.1,GhM_Scaf023G145.1,GhM_Scaf026G149.1,GhM_A03G1077.1,GhM_Scaf001G040.1,GhM_Scaf001G025.1,GhM_Scaf001G001.1,GhM_A12G1246.1,GhM_A05G3870.1,GhM_D01G1342.1,GhM_Scaf035G162.1,GhM_A08G1245.1,GhM_A08G1246.1,GhM_A05G3871.1,GhM_A07G2417.1 | 42 | 5 | Gossypium | Cotton | |||
| TA2:GhM_D10G2622.1,GhM_D10G2623.1,GhM_D10G2624.1,GhM_D10G2625.1,GhM_D10G2626.1,GhM_D10G2627.1,GhM_D10G2628.1,GhM_D10G2629.1,GhM_D10G2630.1,GhM_D10G2631.1,GhM_D10G2632.1,GhM_D10G2635.1,GhM_D10G2636.1,GhM_D10G2637.1,GhM_D10G2638.1,GhM_D10G2640.1,GhM_D10G2641.1,GhM_D10G2642.1,GhM_D10G2643.1,GhM_D10G2644.1,GhM_D10G2646.1;TA318:GhM_A10G2701.1,GhM_A10G2702.1,GhM_A10G2705.1,GhM_A10G2706.1;TA158:GhM_D10G2616.1,GhM_D10G2617.1,GhM_D10G2618.1,GhM_D10G2619.1,GhM_D10G2621.1,GhM_D10G2639.1;TA565:GhM_A10G2896.1,GhM_A10G2898.1,GhM_A10G2905.1;TA529:GhM_A09G1127.1,GhM_A09G1128.1,GhM_A09G1129.1,GhM_A09G1130.1;TA2393:GhM_D09G1054.1,GhM_D09G1055.1 | AT5G15500||AT1G14480||AT5G54620||AT1G14500||AT4G10720||AT4G11000 | ankyrin repeat family protein||protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A10G2703.1,GhM_A11G2968.1 | 42 | 6 | Gossypium | Cotton | |||
| TA77:GhM_D02G0808.1,GhM_D02G0809.1,GhM_D02G0810.1,GhM_D02G0811.1,GhM_D02G0814.1,GhM_D02G0815.1,GhM_D02G0816.1,GhM_D02G0817.1;TA91:GhM_A02G0815.1,GhM_A02G0820.1,GhM_A02G0821.1,GhM_A02G0822.1,GhM_A02G0823.1,GhM_A02G0825.1,GhM_A02G0827.1,GhM_A02G0828.1;TA2912:GhM_A02G1401.1,GhM_A02G1402.1;TA234:GhM_D05G2688.1,GhM_D05G2689.1,GhM_D05G2690.1,GhM_D05G2691.1,GhM_D05G2692.1;TA180:GhM_A05G2678.1,GhM_A05G2681.1,GhM_A05G2682.1,GhM_A05G2683.1,GhM_A05G2685.1,GhM_A05G2686.1;TA555:GhM_A10G2377.1,GhM_A10G2378.1,GhM_A10G2381.1;TA439:GhM_D10G2298.1,GhM_D10G2299.1,GhM_D10G2307.1,GhM_D10G2308.1 | AT1G21240||AT1G21270||AT1G21230||AT1G21250||AT1G21210||AT1G79670||AT1G19390||AT1G16130 | RFO1, WAKL22; RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase||WAK5; WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase||WAK1, PRO25; WAK1 (CELL WALL-ASSOCIATED KINASE); kinase||WAKL2; WAKL2 (wall associated kinase-like 2); kinase||WAK3; WAK3 (wall associated kinase 3); kinase/ protein serine/threonine kinase||wall-associated kinase, putative||WAK4; WAK4 (wall associated kinase 4); ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase||WAK2; WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase | GO:0009311|oligosaccharide metabolic process;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0004674|protein serine/threonine kinase activity;GO:0005618|cell wall;GO:0016301|kinase activity;GO:0005773|vacuole;GO:0009826|unidimensional cell growth;GO:0009505|plant-type cell wall;GO:0004672|protein kinase activity;GO:0048527|lateral root development;GO:0007166|cell surface receptor linked signaling pathway;GO:0009751|response to salicylic acid stimulus;GO:0012505|endomembrane system;GO:0009620|response to fungus;GO:0005509|calcium ion binding;GO:0005524|ATP binding;GO:0009992|cellular water homeostasis | GhM_D03G0739.1,GhM_D03G0740.1,GhM_D10G2304.1,GhM_D10G1483.1,GhM_D03G1304.1,GhM_A03G0793.1 | 42 | 7 | Gossypium | Cotton | |||
| TA2919:GhM_A02G1611.1,GhM_A02G1626.1 | AT1G80510 | amino acid transporter family protein | GO:0016020|membrane;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity | GhM_A01G1018.1,GhM_A01G1877.1,GhM_A02G1213.1,GhM_D03G0793.1,GhM_A06G1502.1,GhM_A13G0582.1,GhM_A08G1349.1,GhM_A09G0228.1,GhM_A09G0584.1,GhM_A10G2259.1,GhM_A11G2693.1,GhM_A05G3465.1,GhM_A05G3466.1,GhM_A05G3765.1,GhM_A05G3773.1,GhM_A06G0869.1,GhM_A06G0962.1,GhM_A06G1903.1,GhM_A07G0721.1,GhM_A07G2027.1,GhM_A08G0917.1,GhM_A11G2426.1,GhM_A11G3559.1,GhM_A12G1016.1,GhM_A01G1202.1,GhM_A01G1639.1,GhM_A01G2386.1,GhM_A02G0925.1,GhM_A06G1939.1,GhM_A06G1859.1,GhM_A03G0778.1,GhM_A11G2880.1,GhM_A04G0404.1,GhM_A11G3721.1,GhM_A04G0736.1,GhM_A03G1296.1,GhM_A06G1395.1,GhM_A06G1558.1,GhM_A08G1241.1 | 41 | 1 | Gossypium | Cotton | |||
| - | AT2G35360||AT3G28490||AT4G04360||AT1G05070||AT5G57040||AT3G09880||AT5G07780 | formin homology 2 domain-containing protein / FH2 domain-containing protein||oxidoreductase, 2OG-Fe(II) oxygenase family protein||ATB' BETA; ATB' BETA; protein phosphatase type 2A regulator||unknown protein||lactoylglutathione lyase family protein / glyoxalase I family protein||ubiquitin family protein | GO:0008152|metabolic process;GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0003824|catalytic activity;GO:0008601|protein phosphatase type 2A regulator activity;GO:0006464|protein modification process;GO:0005575|cellular_component;GO:0016043|cellular component organization;GO:0016491|oxidoreductase activity;GO:0008150|biological_process;GO:0019538|protein metabolic process;GO:0005794|Golgi apparatus;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0000159|protein phosphatase type 2A complex;GO:0012505|endomembrane system;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0030036|actin cytoskeleton organization;GO:0007165|signal transduction | GhM_A01G1270.1,GhM_A05G3109.1,GhM_A03G0082.1,GhM_D03G2019.1,GhM_A12G1994.1,GhM_A09G0579.1,GhM_A06G0441.1,GhM_A04G1318.1,GhM_A08G0537.1,GhM_A11G2874.1,GhM_A02G0449.1,GhM_A01G1408.1,GhM_A03G1834.1,GhM_A02G0520.1,GhM_A10G0636.1,GhM_A02G1142.1,GhM_A10G1055.1,GhM_A03G1316.1,GhM_A05G3712.1,GhM_A11G1810.1,GhM_A03G1114.1,GhM_D11G1798.1,GhM_A07G1000.1,GhM_D07G0991.1,GhM_A12G0782.1,GhM_A08G1047.1,GhM_A09G0950.1,GhM_A06G1313.1,GhM_A07G1755.1,GhM_A04G0467.1,GhM_A06G0880.1,GhM_D06G0886.1,GhM_A08G0687.1,GhM_A08G0845.1,GhM_A03G2093.1,GhM_A12G0239.1,GhM_A11G2939.1,GhM_A07G1856.1,GhM_A12G2643.1,GhM_D12G2532.1 | 40 | 0 | Gossypium | Cotton | |||
| - | AT5G02290||AT2G28930||AT1G07570||AT2G39660||AT5G15080||AT3G01300||AT5G01020||AT2G05940||AT2G26290 | ARSK1; ARSK1 (root-specific kinase 1); kinase||APK1A, APK1; APK1A; kinase/ protein serine/threonine kinase||BIK1; BIK1 (BOTRYTIS-INDUCED KINASE1); kinase||protein kinase, putative||APK1B; APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||NAK; NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||protein kinase family protein | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2750.1,GhM_D01G2677.1,GhM_A03G0595.1,GhM_D03G1529.1,GhM_A04G1081.1,GhM_A09G1935.1,GhM_A05G1048.1,GhM_D05G1059.1,GhM_A05G4187.1,GhM_D04G0739.1,GhM_A10G2789.1,GhM_D10G2722.1,GhM_A13G2912.1,GhM_D13G2812.1,GhM_D09G1834.1,GhM_D04G1542.1,GhM_D11G0819.1,GhM_A05G0157.1,GhM_D05G0165.1,GhM_A07G0478.1,GhM_A02G0005.1,GhM_D02G0014.1,GhM_A06G0915.1,GhM_A05G0369.1,GhM_D05G0388.1,GhM_A07G0221.1,GhM_A06G0970.1,GhM_D07G0223.1,GhM_D06G0923.1,GhM_A13G2519.1,GhM_D13G2430.1,GhM_D06G0976.1,GhM_D07G0471.1,GhM_A05G4357.1,GhM_D04G0580.1,GhM_A09G0288.1,GhM_D09G0260.1,GhM_A11G0800.1,GhM_D13G0756.1,GhM_A13G0583.1 | 40 | 0 | Gossypium | Cotton | |||
| - | AT2G42610||AT1G07090||AT2G31160||AT5G28490||AT3G04510||AT3G23290 | LSH6; LSH6 (LIGHT SENSITIVE HYPOCOTYLS 6)||LSH3; LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3)||LSH10; LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)||LSH4; LSH4 (LIGHT SENSITIVE HYPOCOTYLS 4)||LSH2; LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)||LSH1; LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) | GO:0008150|biological_process;GO:0009826|unidimensional cell growth;;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0010114|response to red light;GO:0010218|response to far red light;GO:0009637|response to blue light;GO:0009416|response to light stimulus;GO:0005575|cellular_component | GhM_A01G0576.1,GhM_D01G0544.1,GhM_A03G0397.1,GhM_D03G1728.1,GhM_A05G1194.1,GhM_D05G1213.1,GhM_A05G1745.1,GhM_A04G0427.1,GhM_D05G3944.1,GhM_A08G3027.1,GhM_D08G2959.1,GhM_A10G0397.1,GhM_D10G0384.1,GhM_A10G1925.1,GhM_D10G1220.1,GhM_A11G2718.1,GhM_A08G2623.1,GhM_D08G2565.1,GhM_D13G2894.1,GhM_A13G2986.1,GhM_A07G1840.1,GhM_D07G1800.1,GhM_A07G2745.1,GhM_D07G2644.1,GhM_A08G2471.1,GhM_D08G2420.1,GhM_A13G2248.1,GhM_A11G3106.1,GhM_D11G3038.1,GhM_D13G2137.1,GhM_D11G1536.1,GhM_A11G1544.1,GhM_D11G2685.1,GhM_D05G1756.1,GhM_Scaf001G014.1,GhM_A09G2801.1,GhM_D09G2677.1,GhM_A10G1309.1,GhM_D10G1814.1 | 39 | 0 | Gossypium | Cotton | |||
| - | AT4G33950||AT5G08590||AT5G37530||AT3G08880||AT3G62120 | OST1, SNRK2-6, SRK2E, SNRK2.6, P44; OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase||ASK2, SNRK2-1, SNRK2.1, SRK2G; SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1); kinase/ protein kinase||unknown protein||tRNA synthetase class II (G, H, P and S) family protein||thiF family protein | GO:0005985|sucrose metabolic process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0040007|growth;GO:0006468|protein amino acid phosphorylation;GO:0006418|tRNA aminoacylation for protein translation;GO:0005575|cellular_component;GO:0004812|aminoacyl-tRNA ligase activity;GO:0008150|biological_process;GO:0010119|regulation of stomatal movement;GO:0016301|kinase activity;GO:0016020|membrane;GO:0004827|proline-tRNA ligase activity;GO:0004672|protein kinase activity;GO:0006433|prolyl-tRNA aminoacylation;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0005737|cytoplasm;GO:0009931|calcium-dependent protein serine/threonine kinase activity;GO:0019432|triglyceride biosynthetic process;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0006412|translation;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway;GO:0012505|endomembrane system;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005488|binding;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0000166|nucleotide binding;GO:0010118|stomatal movement;GO:0048366|leaf development;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A01G0084.1,GhM_D01G0067.1,GhM_A11G2213.1,GhM_D11G2189.1,GhM_D08G1482.1,GhM_D05G1626.1,GhM_D01G1907.1,GhM_D06G1840.1,GhM_D05G4287.1,GhM_D04G1022.1,GhM_D11G2889.1,GhM_D11G2404.1,GhM_D13G1457.1,GhM_A11G1966.1,GhM_D11G1952.1,GhM_D12G0580.1,GhM_D01G0373.1,GhM_D04G1812.1,GhM_D01G2756.1,GhM_A01G2832.1,GhM_D11G2611.1,GhM_D03G0908.1,GhM_D10G2843.1,GhM_D13G2146.1,GhM_D07G1470.1,GhM_A06G2603.1,GhM_D12G1518.1,GhM_A12G1568.1,GhM_D06G2594.1,GhM_D06G1914.1,GhM_D12G0836.1,GhM_D12G0581.1,GhM_D13G1593.1,GhM_D05G4055.1,GhM_D06G0453.1,GhM_D02G1174.1,GhM_D12G1714.1,GhM_D09G0461.1 | 38 | 0 | Gossypium | Cotton | |||
| TA776:GhM_A01G0001.1,GhM_A01G0002.1,GhM_A01G0014.1;TA1124:GhM_Scaf001G011.1,GhM_Scaf001G021.1,GhM_Scaf001G022.1;TA2313:GhM_D08G1048.1,GhM_D08G1049.1;TA3593:GhM_Scaf003G058.1,GhM_Scaf003G061.1;TA1725:GhM_D03G0178.1,GhM_D03G0179.1 | ATCG00190||AT3G50780 | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PRLI-interacting factor-related (TAIR:AT1G63850.1); Has 173 Blast hits to 173 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).||RPOB; Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0009295|nucleoid | GhM_A05G3628.1,GhM_A06G1341.1,GhM_A12G1218.1,GhM_A04G0773.1,GhM_A06G1763.1,GhM_A06G1764.1,GhM_D01G0379.1,GhM_D01G0380.1,GhM_D01G0381.1,GhM_D02G1250.1,GhM_Scaf001G054.1,GhM_Scaf052G206.1,GhM_Scaf071G220.1,GhM_Scaf027G153.1,GhM_D12G0985.1,GhM_D10G2620.1,GhM_D11G1757.1,GhM_D12G0854.1,GhM_Scaf019G132.1,GhM_Scaf005G083.1,GhM_Scaf231G355.1,GhM_Scaf239G367.1,GhM_Scaf003G059.1,GhM_Scaf027G152.1,GhM_Scaf239G366.1,GhM_A02G2083.1 | 38 | 5 | Gossypium | Cotton | |||
| TA1234:GhM_A11G0656.1,GhM_A11G0657.1 | AT5G09810||AT2G37620||AT3G12110 | ACT2, ACT7; ACT7 (ACTIN 7); structural constituent of cytoskeleton||ACT1, AAc1; ACT1 (ACTIN 1); structural constituent of cytoskeleton||ACT11; ACT11 (actin-11); structural constituent of cytoskeleton | GO:0048364|root development;GO:0009733|response to auxin stimulus;GO:0048767|root hair elongation;GO:0007010|cytoskeleton organization;GO:0005886|plasma membrane;GO:0010053|root epidermal cell differentiation;GO:0005739|mitochondrion;GO:0048589|developmental growth;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0005200|structural constituent of cytoskeleton;GO:0010583|response to cyclopentenone;GO:0009416|response to light stimulus;GO:0005856|cytoskeleton;GO:0009845|seed germination;GO:0005515|protein binding;GO:0051301|cell division;GO:0009611|response to wounding;GO:0030036|actin cytoskeleton organization | GhM_A01G0032.1,GhM_A01G2191.1,GhM_A01G2754.1,GhM_A03G0583.1,GhM_A03G2707.1,GhM_A04G0667.1,GhM_A05G4191.1,GhM_A05G4639.1,GhM_A07G1185.1,GhM_A08G0061.1,GhM_A08G1485.1,GhM_A09G1940.1,GhM_A10G2774.1,GhM_D11G0664.1,GhM_A11G2666.1,GhM_D11G2662.1,GhM_D04G0303.1,GhM_D02G2725.1,GhM_D08G0050.1,GhM_D07G1169.1,GhM_D03G1539.1,GhM_D01G2156.1,GhM_A13G2918.1,GhM_D13G2817.1,GhM_D01G2681.1,GhM_D01G0017.1,GhM_D09G1840.1,GhM_A13G0236.1,GhM_D01G1564.1,GhM_D04G0733.1,GhM_D04G1067.1,GhM_D07G0184.1,GhM_D08G1370.1,GhM_D10G2706.1,GhM_D13G0220.1 | 37 | 1 | Gossypium | Cotton | |||
| TA363:GhM_D02G1290.1,GhM_D02G1296.1,GhM_D02G1297.1,GhM_D02G1305.1;TA1059:GhM_A06G1355.1,GhM_A06G1356.1,GhM_A06G1360.1;TA3602:GhM_Scaf009G108.1,GhM_Scaf009G110.1;TA1487:GhM_A13G1031.1,GhM_A13G1037.1 | - | - | - | GhM_A04G0694.1,GhM_A01G1714.1,GhM_D05G4223.1,GhM_D06G1492.1,GhM_D10G1507.1,GhM_A07G2125.1,GhM_A11G2417.1,GhM_A13G1046.1,GhM_D06G1493.1,GhM_D05G3646.1,GhM_D01G0748.1,GhM_D01G1672.1,GhM_D02G1078.1,GhM_D04G0999.1,GhM_D04G1098.1,GhM_D05G2744.1,GhM_D08G1156.1,GhM_D09G0574.1,GhM_D10G1758.1,GhM_D10G1759.1,GhM_D11G2667.1,GhM_Scaf266G378.1,GhM_D12G0868.1,GhM_Scaf059G211.1,GhM_D02G1434.1,GhM_D04G1017.1 | 37 | 4 | Gossypium | Cotton | |||
| TA2413:GhM_D09G1696.1,GhM_D09G1705.1 | - | - | - | GhM_A03G1836.1,GhM_A11G0366.1,GhM_A11G2884.1,GhM_D01G0784.1,GhM_D02G1472.1,GhM_D02G1891.1,GhM_D04G1221.1,GhM_D04G1228.1,GhM_D04G1678.1,GhM_A07G2197.1,GhM_D13G1084.1,GhM_D10G2074.1,GhM_D01G0951.1,GhM_D10G2296.1,GhM_D11G2408.1,GhM_A03G2215.1,GhM_D11G2774.1,GhM_Scaf160G301.1,GhM_D12G1174.1,GhM_D11G2579.1,GhM_D13G0851.1,GhM_A05G3183.1,GhM_A05G3222.1,GhM_A05G3770.1,GhM_A06G1717.1,GhM_A09G1641.1,GhM_A11G2034.1,GhM_A12G1231.1,GhM_A13G0657.1,GhM_D06G0629.1,GhM_D08G2154.1,GhM_D10G1844.1,GhM_D12G0593.1,GhM_D12G0711.1 | 36 | 1 | Gossypium | Cotton | |||
| TA7:GhM_D02G0565.1,GhM_D02G0566.1,GhM_D02G0569.1,GhM_D02G0573.1,GhM_D02G0574.1,GhM_D02G0575.1,GhM_D02G0576.1,GhM_D02G0578.1,GhM_D02G0579.1,GhM_D02G0580.1,GhM_D02G0581.1,GhM_D02G0582.1,GhM_D02G0586.1,GhM_D02G0587.1,GhM_D02G0588.1,GhM_D02G0589.1,GhM_D02G0591.1;TA10:GhM_A02G0578.1,GhM_A02G0579.1,GhM_A02G0580.1,GhM_A02G0582.1,GhM_A02G0583.1,GhM_A02G0584.1,GhM_A02G0585.1,GhM_A02G0588.1,GhM_A02G0590.1,GhM_A02G0591.1,GhM_A02G0592.1,GhM_A02G0593.1,GhM_A02G0594.1,GhM_A02G0595.1,GhM_A02G0596.1,GhM_A02G0597.1,GhM_A02G0599.1 | AT1G24020||AT1G70830||AT5G49230 | MLP423; MLP423 (MLP-LIKE PROTEIN 423)||MLP28; MLP28 (MLP-LIKE PROTEIN 28)||HRB1; HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding | GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009414|response to water deprivation;GO:0010161|red light signaling pathway;GO:0006952|defense response;GO:0009607|response to biotic stimulus;GO:0016020|membrane;GO:0005575|cellular_component | GhM_D02G0567.1,GhM_D02G0592.1 | 36 | 2 | Gossypium | Cotton | |||
| TA3:GhM_D04G2199.1,GhM_D04G2200.1,GhM_D04G2201.1,GhM_D04G2202.1,GhM_D04G2205.1,GhM_D04G2206.1,GhM_D04G2209.1,GhM_D04G2212.1,GhM_D04G2213.1,GhM_D04G2216.1,GhM_D04G2219.1,GhM_D04G2221.1,GhM_D04G2222.1,GhM_D04G2224.1,GhM_D04G2225.1,GhM_D04G2227.1,GhM_D04G2229.1,GhM_D04G2230.1,GhM_D04G2231.1,GhM_D04G2232.1;TA26:GhM_A04G1730.1,GhM_A04G1731.1,GhM_A04G1732.1,GhM_A04G1733.1,GhM_A04G1736.1,GhM_A04G1738.1,GhM_A04G1743.1,GhM_A04G1744.1,GhM_A04G1747.1,GhM_A04G1750.1,GhM_A04G1751.1,GhM_A04G1753.1,GhM_A04G1756.1;TA1860:GhM_D04G2207.1,GhM_D04G2218.1 | - | - | - | GhM_D04G2210.1 | 36 | 3 | Gossypium | Cotton | |||
| TA55:GhM_A01G0563.1,GhM_A01G0564.1,GhM_A01G0565.1,GhM_A01G0567.1,GhM_A01G0569.1,GhM_A01G0570.1,GhM_A01G0571.1,GhM_A01G0572.1,GhM_A01G0573.1;TA105:GhM_D01G0531.1,GhM_D01G0534.1,GhM_D01G0535.1,GhM_D01G0536.1,GhM_D01G0539.1,GhM_D01G0541.1,GhM_D01G0573.1;TA1324:GhM_A11G3651.1,GhM_A11G3656.1;TA750:GhM_D05G4336.1,GhM_D05G4337.1,GhM_D05G4347.1;TA2115:GhM_A01G0503.1,GhM_A01G0507.1;TA245:GhM_A01G0502.1,GhM_A01G0529.1,GhM_A01G0530.1,GhM_A01G0531.1,GhM_A01G0533.1;TA1568:GhM_D01G0501.1,GhM_D01G0502.1 | AT3G28890||AT5G20480||AT3G05650||AT5G39390||AT1G45616||AT2G15080||AT2G15042||AT3G47090||AT2G25470||AT3G47570||AT5G44700||AT3G47580||AT3G47110||AT3G49670||AT5G40170 | leucine-rich repeat transmembrane protein kinase, putative||EFR; EFR (EF-TU RECEPTOR); ATP binding / kinase/ protein serine/threonine kinase||BAM2; BAM2 (BARELY ANY MERISTEM 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding||AtRLP43; AtRLP43 (Receptor Like Protein 43); kinase/ protein binding||protein binding||AtRLP21; AtRLP21 (Receptor Like Protein 21); protein binding||AtRLP19; AtRLP19 (Receptor Like Protein 19); kinase/ protein binding||EDA23, GSO2; GSO2 (GASSHO 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||leucine-rich repeat family protein / protein kinase family protein||AtRLP54; AtRLP54 (Receptor Like Protein 54); kinase/ protein binding||AtRLP32; AtRLP32 (Receptor Like Protein 32); kinase/ protein binding | GO:0010204|defense response signaling pathway, resistance gene-independent;GO:0006468|protein amino acid phosphorylation;GO:0009553|embryo sac development;GO:0019199|transmembrane receptor protein kinase activity;GO:0005886|plasma membrane;GO:0009790|embryonic development;GO:0004674|protein serine/threonine kinase activity;GO:0008150|biological_process;GO:0005524|ATP binding;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0016301|kinase activity;GO:0016020|membrane;GO:0008544|epidermis development;GO:0004672|protein kinase activity;GO:0016045|detection of bacterium;GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004713|protein tyrosine kinase activity;GO:0002764|immune response-regulating signaling pathway;GO:0007165|signal transduction;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway | GhM_A11G3625.1,GhM_D11G3533.1,GhM_A01G0610.1,GhM_D01G0500.1,GhM_D01G0572.1,GhM_A08G0286.1 | 36 | 7 | Gossypium | Cotton | |||
| - | AT3G23340||AT4G26100||AT1G72710||AT4G28880||AT4G28540||AT4G14340||AT1G03930 | ckl10; ckl10 (Casein Kinase I-like 10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||CKL2; CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||CKI1, CKL11; CKI1 (CASEIN KINASE I); kinase/ protein serine/threonine kinase||CKL6, PAPK1; CKL6 (CASEIN KINASE I-LIKE 6); kinase/ protein serine/threonine kinase||ckl3; ckl3 (Casein Kinase I-like 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ADK1, CKL9ALPHA, CKL9BETA; ADK1 (dual specificity kinase 1); kinase/ protein serine/threonine/tyrosine kinase||CK1, CKL1; CK1 (CASEIN KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0005634|nucleus;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0009506|plasmodesma;GO:0005737|cytoplasm;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0007165|signal transduction;GO:0016310|phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0448.1,GhM_D02G0444.1,GhM_A05G0332.1,GhM_D05G0346.1,GhM_A05G1521.1,GhM_D05G1537.1,GhM_A07G0057.1,GhM_A06G0771.1,GhM_D06G0772.1,GhM_A08G3197.1,GhM_D08G3128.1,GhM_D07G0085.1,GhM_A09G2798.1,GhM_A07G1851.1,GhM_D07G1812.1,GhM_A07G2751.1,GhM_D07G2651.1,GhM_A08G2478.1,GhM_D08G2425.1,GhM_A08G2781.1,GhM_D08G2725.1,GhM_A10G1303.1,GhM_D10G1807.1,GhM_A11G1551.1,GhM_D11G1545.1,GhM_A11G3100.1,GhM_D11G3030.1,GhM_D05G0438.1,GhM_D09G2674.1,GhM_A11G3132.1,GhM_D07G2666.1,GhM_A07G0152.1,GhM_D07G0151.1,GhM_A13G2546.1,GhM_D13G2459.1 | 35 | 0 | Gossypium | Cotton | |||
| TA14:GhM_A10G2473.1,GhM_A10G2474.1,GhM_A10G2475.1,GhM_A10G2476.1,GhM_A10G2477.1,GhM_A10G2478.1,GhM_A10G2479.1,GhM_A10G2480.1,GhM_A10G2481.1,GhM_A10G2482.1,GhM_A10G2483.1,GhM_A10G2484.1,GhM_A10G2485.1,GhM_A10G2486.1,GhM_A10G2491.1;TA34:GhM_D10G2392.1,GhM_D10G2398.1,GhM_D10G2399.1,GhM_D10G2400.1,GhM_D10G2401.1,GhM_D10G2402.1,GhM_D10G2403.1,GhM_D10G2407.1,GhM_D10G2408.1,GhM_D10G2409.1,GhM_D10G2410.1 | AT5G06600||AT3G11910||AT3G58250 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein||UBP13; UBP13 (UBIQUITIN-SPECIFIC PROTEASE 13); ubiquitin thiolesterase/ ubiquitin-specific protease||UBP12; UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12); ubiquitin thiolesterase/ ubiquitin-specific protease | GO:0008150|biological_process;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004221|ubiquitin thiolesterase activity;GO:0003674|molecular_function;GO:0006265|DNA topological change;GO:0003690|double-stranded DNA binding;GO:0005575|cellular_component | GhM_A01G2478.1,GhM_A04G0613.1,GhM_A05G0846.1,GhM_A07G1378.1,GhM_A10G2465.1,GhM_D01G2417.1,GhM_D04G1154.1,GhM_D05G0866.1,GhM_D07G1357.1 | 35 | 2 | Gossypium | Cotton | |||
| TA28:GhM_D02G2694.1,GhM_D02G2695.1,GhM_D02G2696.1,GhM_D02G2697.1,GhM_D02G2698.1,GhM_D02G2699.1,GhM_D02G2700.1,GhM_D02G2701.1,GhM_D02G2702.1,GhM_D02G2703.1,GhM_D02G2704.1,GhM_D02G2705.1;TA38:GhM_A03G2674.1,GhM_A03G2675.1,GhM_A03G2676.1,GhM_A03G2677.1,GhM_A03G2678.1,GhM_A03G2679.1,GhM_A03G2680.1,GhM_A03G2681.1,GhM_A03G2682.1,GhM_A03G2683.1,GhM_A03G2684.1;TA1611:GhM_D01G2121.1,GhM_D01G2122.1;TA791:GhM_A01G2148.1,GhM_A01G2149.1,GhM_A01G2150.1 | AT1G29510||AT1G29430||AT1G29450||AT1G29440||AT1G29500||AT1G29420 | auxin-responsive protein, putative||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR68 (SMALL AUXIN UPREGULATED 68) (TAIR:AT1G29510.1); Has 327 Blast hits to 317 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 327; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||SAUR68; SAUR68 (SMALL AUXIN UPREGULATED 68)||auxin-responsive family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to auxin stimulus; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR68 (SMALL AUXIN UPREGULATED 68) (TAIR:AT1G29510.1); Has 372 Blast hits to 362 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0005730|nucleolus;GO:0005575|cellular_component | GhM_A01G1814.1,GhM_D01G1799.1,GhM_A01G1937.1,GhM_D04G1439.1,GhM_A03G1250.1,GhM_A04G1835.1,GhM_A10G1523.1 | 35 | 4 | Gossypium | Cotton | |||
| - | AT1G48120 | calcineurin-like phosphoesterase family protein | GO:0008150|biological_process;GO:0004722|protein serine/threonine phosphatase activity;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_A01G1977.1,GhM_A03G0523.1,GhM_A12G0776.1,GhM_A08G1201.1,GhM_D04G1501.1,GhM_A11G2145.1,GhM_D05G4015.1,GhM_D03G0670.1,GhM_D07G2547.1,GhM_D05G1642.1,GhM_D04G1638.1,GhM_D02G1796.1,GhM_D09G1267.1,GhM_D12G0231.1,GhM_D03G0514.1,GhM_D06G1027.1,GhM_D06G1028.1,GhM_D07G0888.1,GhM_A06G1432.1,GhM_A09G0497.1,GhM_D09G1266.1,GhM_A09G2535.1,GhM_A13G1383.1,GhM_D05G2884.1,GhM_D03G0980.1,GhM_D12G1641.1,GhM_D04G1753.1,GhM_Scaf222G351.1,GhM_D10G1159.1,GhM_D10G1580.1,GhM_Scaf233G359.1,GhM_D08G2738.1,GhM_D07G1896.1,GhM_D13G1791.1 | 34 | 0 | Gossypium | Cotton | |||
| TA1:GhM_A13G2665.1,GhM_A13G2666.1,GhM_A13G2667.1,GhM_A13G2668.1,GhM_A13G2669.1,GhM_A13G2670.1,GhM_A13G2672.1,GhM_A13G2673.1,GhM_A13G2674.1,GhM_A13G2675.1,GhM_A13G2676.1,GhM_A13G2677.1,GhM_A13G2678.1,GhM_A13G2679.1,GhM_A13G2683.1,GhM_A13G2687.1,GhM_A13G2688.1,GhM_A13G2689.1,GhM_A13G2690.1,GhM_A13G2692.1,GhM_A13G2693.1,GhM_A13G2694.1;TA35:GhM_D13G2570.1,GhM_D13G2572.1,GhM_D13G2573.1,GhM_D13G2574.1,GhM_D13G2575.1,GhM_D13G2578.1,GhM_D13G2579.1,GhM_D13G2580.1,GhM_D13G2581.1,GhM_D13G2582.1,GhM_D13G2583.1 | AT1G52820||AT4G03070||AT1G80320||AT1G52800 | 2-oxoglutarate-dependent dioxygenase, putative||oxidoreductase, 2OG-Fe(II) oxygenase family protein||AOP1, AOP, AOP1.1; AOP1; oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | GO:0008150|biological_process;GO:0019761|glucosinolate biosynthetic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0016020|membrane;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A02G0355.1 | 34 | 2 | Gossypium | Cotton | |||
| TA37:GhM_A02G1613.1,GhM_A02G1615.1,GhM_A02G1616.1,GhM_A02G1617.1,GhM_A02G1618.1,GhM_A02G1620.1,GhM_A02G1621.1,GhM_A02G1622.1,GhM_A02G1623.1,GhM_A02G1624.1,GhM_A02G1625.1;TA2910:GhM_A02G1344.1,GhM_A02G1345.1;TA187:GhM_A07G1012.1,GhM_A07G1013.1,GhM_A07G1014.1,GhM_A07G1015.1,GhM_A07G1016.1,GhM_A07G1017.1;TA3375:GhM_A07G1049.1,GhM_A07G1050.1;TA227:GhM_D03G0829.1,GhM_D03G0830.1,GhM_D03G0831.1,GhM_D03G0833.1,GhM_D03G0834.1;TA2920:GhM_A02G1640.1,GhM_A02G1642.1 | AT3G07820||AT3G07850||AT3G14040||AT3G07840||AT5G48140 | exopolygalacturonase / galacturan 1,4-alpha-galacturonidase / pectinase||polygalacturonase, putative / pectinase, putative||polygalacturonase 3 (PGA3) / pectinase | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | GhM_A02G1641.1,GhM_D07G1005.1,GhM_D09G0329.1,GhM_A06G0944.1,GhM_D11G1753.1,GhM_A11G1768.1 | 34 | 6 | Gossypium | Cotton | |||
| TA76:GhM_D02G0256.1,GhM_D02G0259.1,GhM_D02G0260.1,GhM_D02G0261.1,GhM_D02G0264.1,GhM_D02G0268.1,GhM_D02G0269.1,GhM_D02G0276.1;TA3080:GhM_A04G1095.1,GhM_A04G1097.1;TA1830:GhM_D04G1555.1,GhM_D04G1558.1;TA1347:GhM_A11G4104.1,GhM_A11G4106.1;TA2978:GhM_A03G0617.1,GhM_A03G0619.1;TA1624:GhM_D01G2669.1,GhM_D01G2670.1 | AT2G37710||AT3G53810||AT3G55550||AT5G60020||AT2G29130 | lectin protein kinase, putative||RLK; RLK (receptor lectin kinase); kinase||LAC2, ATLAC2; LAC2 (laccase 2); laccase||LAC17, ATLAC17; LAC17 (laccase 17); laccase | GO:0012505|endomembrane system;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0006468|protein amino acid phosphorylation;GO:0048046|apoplast;GO:0009414|response to water deprivation;GO:0009751|response to salicylic acid stimulus;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0046274|lignin catabolic process | GhM_A04G1206.1,GhM_A07G0540.1,GhM_A09G1918.1,GhM_D04G1687.1,GhM_D09G1816.1,GhM_D07G0530.1,GhM_A01G2742.1,GhM_A01G2744.1,GhM_D03G1503.1,GhM_D13G2808.1,GhM_D01G2672.1,GhM_D05G1110.1,GhM_A09G1923.1,GhM_D09G1821.1,GhM_D11G4000.1,GhM_D04G1547.1 | 34 | 6 | Gossypium | Cotton | |||
| - | AT1G78300||AT5G65430||AT1G34760||AT1G26480||AT5G38480 | GRF12, GF14 IOTA; GRF12 (GENERAL REGULATORY FACTOR 12); protein binding / protein phosphorylated amino acid binding||GRF3, RCI1; GRF3 (GENERAL REGULATORY FACTOR 3); ATP binding / protein binding / protein phosphorylated amino acid binding||GRF2, 14-3-3OMEGA, GF14 OMEGA; GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid binding||GRF11, GF14 OMICRON; GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding||GRF8, 14-3-3KAPPA, GF14 KAPPA; GRF8 (GENERAL REGULATORY FACTOR 8); protein binding / protein phosphorylated amino acid binding | GO:0005515|protein binding;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0045309|protein phosphorylated amino acid binding;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005634|nucleus;GO:0005524|ATP binding;GO:0005737|cytoplasm;GO:0005739|mitochondrion;GO:0051117|ATPase binding;GO:0016597|amino acid binding;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A01G0152.1,GhM_D01G0131.1,GhM_A01G1475.1,GhM_D01G1422.1,GhM_A02G0920.1,GhM_D02G0917.1,GhM_A03G2316.1,GhM_D02G2345.1,GhM_A04G1485.1,GhM_D04G1975.1,GhM_A05G2473.1,GhM_D05G2485.1,GhM_A05G2515.1,GhM_D05G2526.1,GhM_A05G2535.1,GhM_A05G1751.1,GhM_D05G1761.1,GhM_A06G0402.1,GhM_D06G0407.1,GhM_A13G0989.1,GhM_D13G0930.1,GhM_D05G2544.1,GhM_A05G2991.1,GhM_A06G0386.1,GhM_A13G0815.1,GhM_A07G0851.1,GhM_D07G0852.1,GhM_A07G2106.1,GhM_D07G2085.1,GhM_A07G2119.1,GhM_D07G2157.1,GhM_D13G0575.1,GhM_D05G2998.1 | 33 | 0 | Gossypium | Cotton | |||
| - | AT3G20410||AT1G50700||AT4G21940||AT4G04720||AT4G23650||AT5G12180||AT1G76050 | CDPK6, CPK3; CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK17; CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK21; CPK21; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||pseudouridine synthase family protein||CPK15; CPK15; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK9; CPK9 (calmodulin-domain protein kinase 9); calmodulin-dependent protein kinase/ kinase||CPK33; CPK33; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity;GO:0009982|pseudouridine synthase activity;GO:0006499|N-terminal protein myristoylation;GO:0010119|regulation of stomatal movement;GO:0016301|kinase activity;GO:0001522|pseudouridine synthesis;GO:0005773|vacuole;GO:0004672|protein kinase activity;GO:0004683|calmodulin-dependent protein kinase activity;GO:0005737|cytoplasm;GO:0009738|abscisic acid mediated signaling pathway;GO:0009507|chloroplast;GO:0005509|calcium ion binding;GO:0007165|signal transduction;GO:0010359|regulation of anion channel activity;GO:0005524|ATP binding | GhM_A01G0858.1,GhM_D01G0819.1,GhM_A04G0163.1,GhM_D05G4239.1,GhM_A06G0014.1,GhM_A05G2051.1,GhM_D05G2066.1,GhM_D06G0008.1,GhM_A10G0143.1,GhM_A06G2618.1,GhM_D06G2609.1,GhM_A12G2884.1,GhM_A02G1293.1,GhM_D12G2773.1,GhM_A11G0262.1,GhM_D11G0257.1,GhM_D03G0948.1,GhM_A05G0813.1,GhM_D05G0835.1,GhM_A07G1459.1,GhM_D07G1435.1,GhM_A08G0163.1,GhM_D08G0153.1,GhM_A09G1423.1,GhM_D09G1334.1,GhM_A13G2820.1,GhM_D13G2705.1,GhM_D10G0132.1,GhM_A13G1864.1,GhM_D13G1753.1,GhM_D09G0342.1,GhM_D05G2065.1,GhM_A09G0376.1 | 33 | 0 | Gossypium | Cotton | |||
| - | AT1G19300||AT3G06260||AT1G13250||AT3G28340||AT3G62660||AT1G70090 | GATL10; GATL10 (Galacturonosyltransferase-like 10); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring hexosyl groups||GATL9, LGT8; LGT8 (GLUCOSYL TRANSFERASE FAMILY 8); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||GATL4; GATL4 (Galacturonosyltransferase-like 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||GATL3; GATL3 (Galacturonosyltransferase-like 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||GATL1, PARVUS, GLZ1; PARVUS (PARVUS); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||GATL7; GATL7 (Galacturonosyltransferase-like 7); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0012505|endomembrane system;GO:0052386|cell wall thickening;GO:0016051|carbohydrate biosynthetic process;GO:0010051|xylem and phloem pattern formation;GO:0032504|multicellular organism reproduction;GO:0010417|glucuronoxylan biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity;GO:0048366|leaf development;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005783|endoplasmic reticulum | GhM_A01G1304.1,GhM_D01G1273.1,GhM_D05G2224.1,GhM_A02G2086.1,GhM_D03G0175.1,GhM_A05G2202.1,GhM_A05G2911.1,GhM_D05G2925.1,GhM_A06G0131.1,GhM_D06G0127.1,GhM_A11G2181.1,GhM_D11G2155.1,GhM_A12G0764.1,GhM_D12G0753.1,GhM_D02G1039.1,GhM_A10G1235.1,GhM_D10G1885.1,GhM_A11G1411.1,GhM_D11G1398.1,GhM_A05G1000.1,GhM_D05G1017.1,GhM_A05G4326.1,GhM_D04G0612.1,GhM_A11G1314.1,GhM_A07G1541.1,GhM_D07G1510.1,GhM_A12G1666.1,GhM_D12G1613.1,GhM_D11G1316.1,GhM_A03G1946.1,GhM_D02G1991.1,GhM_A05G3826.1,GhM_D05G3722.1 | 33 | 0 | Gossypium | Cotton | |||
| TA1632:GhM_D02G0033.1,GhM_D02G0034.1;TA2868:GhM_A02G0023.1,GhM_A02G0024.1 | AT5G53300||AT4G27960||AT5G56150||AT3G08690 | UBC10; UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase||UBC9; UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase||UBC30; UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase||UBC11, ATUBC11; UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase | GO:0012505|endomembrane system;GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component | GhM_A01G2100.1,GhM_A11G0264.1,GhM_A09G2619.1,GhM_D09G2500.1,GhM_D11G0259.1,GhM_A02G1273.1,GhM_A08G1377.1,GhM_D03G0969.1,GhM_D08G1475.1,GhM_A10G1907.1,GhM_A11G0157.1,GhM_A11G1094.1,GhM_D10G1239.1,GhM_D11G0155.1,GhM_D12G2981.1,GhM_D11G1107.1,GhM_A09G2230.1,GhM_D09G2137.1,GhM_A12G3097.1,GhM_D12G0389.1,GhM_D08G0328.1,GhM_A04G0016.1,GhM_A05G3096.1,GhM_A08G0344.1,GhM_A11G2015.1,GhM_A12G0403.1,GhM_D01G2070.1,GhM_D05G3096.1,GhM_D11G2003.1 | 33 | 2 | Gossypium | Cotton | |||
| TA2338:GhM_D08G2312.1,GhM_D08G2323.1;TA3478:GhM_A08G2366.1,GhM_A08G2379.1 | AT5G23860||AT5G12250||AT1G75780||AT5G62690||AT2G29550 | TUB6; TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton||TUB8; TUB8; structural constituent of cytoskeleton||TUB7; TUB7; structural constituent of cytoskeleton||TUB1; TUB1; GTP binding / GTPase/ structural molecule||TUB2; TUB2; GTP binding / GTPase/ structural molecule | GO:0005200|structural constituent of cytoskeleton;GO:0005515|protein binding;GO:0015630|microtubule cytoskeleton;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0046686|response to cadmium ion;GO:0010583|response to cyclopentenone;GO:0005886|plasma membrane;GO:0045298|tubulin complex;GO:0009651|response to salt stress;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0007017|microtubule-based process;GO:0005198|structural molecule activity;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A01G1219.1,GhM_A03G0286.1,GhM_A03G0650.1,GhM_A03G1027.1,GhM_A05G1003.1,GhM_A05G1224.1,GhM_A05G2084.1,GhM_A05G2873.1,GhM_A06G0039.1,GhM_A07G1429.1,GhM_A07G1430.1,GhM_D09G0545.1,GhM_A09G0531.1,GhM_D09G1911.1,GhM_D03G1462.1,GhM_A09G2010.1,GhM_D05G1018.1,GhM_A11G3860.1,GhM_D11G3777.1,GhM_D07G1410.1,GhM_D02G1172.1,GhM_D05G1244.1,GhM_D09G2052.1,GhM_A09G2139.1,GhM_D01G1192.1,GhM_D05G2875.1,GhM_D05G2876.1,GhM_D05G2877.1,GhM_D06G0035.1 | 33 | 2 | Gossypium | Cotton | |||
| - | AT1G01140||AT1G04020||AT2G26980||AT1G30270||AT5G18620||AT4G24400 | CIPK3; CIPK3 (CBL-INTERACTING PROTEIN KINASE 3); kinase/ protein kinase/ protein serine/threonine kinase||CIPK8, SnRK3.13, PKS11; CIPK8 (CBL-INTERACTING PROTEIN KINASE 8); kinase/ protein kinase||CIPK23, SnRK3.23, ATCIPK23, LKS1; CIPK23 (CBL-INTERACTING PROTEIN KINASE 23); kinase/ protein binding / protein serine/threonine kinase||CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding||ATBARD1, BARD1; BARD1 (BREAST CANCER ASSOCIATED RING 1); DNA binding / transcription coactivator||CIPK9, PKS6; CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0031491|nucleosome binding;GO:0010107|potassium ion import;GO:0010167|response to nitrate;GO:0006281|DNA repair;GO:0006468|protein amino acid phosphorylation;GO:0003677|DNA binding;GO:0004386|helicase activity;GO:0005886|plasma membrane;GO:0004674|protein serine/threonine kinase activity;GO:0009735|response to cytokinin stimulus;GO:0007584|response to nutrient;GO:0009628|response to abiotic stimulus;GO:0009934|regulation of meristem structural organization;GO:0003676|nucleic acid binding;GO:0016301|kinase activity;GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;GO:0009749|response to glucose stimulus;GO:0004672|protein kinase activity;GO:0009737|response to abscisic acid stimulus;GO:0005737|cytoplasm;GO:0003713|transcription coactivator activity;GO:0005829|cytosol;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway;GO:0043044|ATP-dependent chromatin remodeling;GO:0016585|chromatin remodeling complex;GO:0009845|seed germination;GO:0005515|protein binding;GO:0005634|nucleus;GO:0010118|stomatal movement;GO:0007165|signal transduction;GO:0005622|intracellular;GO:0006338|chromatin remodeling;GO:0048366|leaf development;GO:0005524|ATP binding | GhM_A01G1271.1,GhM_A05G3625.1,GhM_A04G0834.1,GhM_A08G2022.1,GhM_A12G0966.1,GhM_A02G0924.1,GhM_D11G1180.1,GhM_A05G0795.1,GhM_D05G0820.1,GhM_A07G1427.1,GhM_A06G1831.1,GhM_A05G3458.1,GhM_A11G1168.1,GhM_A07G1637.1,GhM_D07G1603.1,GhM_A09G1050.1,GhM_D09G0984.1,GhM_A09G1385.1,GhM_D09G1303.1,GhM_A10G0487.1,GhM_D10G0468.1,GhM_A12G0879.1,GhM_A03G1859.1,GhM_A12G1518.1,GhM_D06G1811.1,GhM_D07G1408.1,GhM_A05G2434.1,GhM_D05G2446.1,GhM_A06G0319.1,GhM_D06G0332.1,GhM_A11G3334.1,GhM_A09G0248.1 | 32 | 0 | Gossypium | Cotton | |||
| - | AT2G30690 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1976.1,GhM_A13G0545.1,GhM_A04G1480.1,GhM_D11G0530.1,GhM_D03G0592.1,GhM_A13G1298.1,GhM_D09G1704.1,GhM_A09G0312.1,GhM_D07G2602.1,GhM_A07G2705.1,GhM_D10G2221.1,GhM_A08G1429.1,GhM_A01G2003.1,GhM_A12G0701.1,GhM_A05G3882.1,GhM_D04G1265.1,GhM_D03G0396.1,GhM_A12G2147.1,GhM_D13G1995.1,GhM_D07G0717.1,GhM_A10G2562.1,GhM_D07G1130.1,GhM_D10G1296.1,GhM_D02G0963.1,GhM_D06G0916.1,GhM_A11G2863.1,GhM_D04G0755.1,GhM_A07G2085.1,GhM_D10G0908.1,GhM_A09G0650.1,GhM_Scaf108G263.1,GhM_D06G2060.1 | 32 | 0 | Gossypium | Cotton | |||
| - | AT1G10630||AT3G62290||AT5G14670||AT3G27830 | ATARFA1E; ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding||RPL12-A, RPL12; RPL12-A (RIBOSOMAL PROTEIN L12-A); structural constituent of ribosome||ATARFA1F; ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding||ATARFA1B; ATARFA1B (ADP-ribosylation factor A1B); GTP binding / phospholipase activator/ protein binding | GO:0005507|copper ion binding;GO:0005515|protein binding;GO:0005525|GTP binding;GO:0016004|phospholipase activator activity;GO:0009507|chloroplast;GO:0006499|N-terminal protein myristoylation;GO:0015934|large ribosomal subunit;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005622|intracellular;GO:0000311|plastid large ribosomal subunit;GO:0009295|nucleoid;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0005773|vacuole | GhM_A01G2014.1,GhM_A05G3672.1,GhM_A03G1878.1,GhM_A13G1557.1,GhM_A05G4283.1,GhM_D04G0653.1,GhM_A07G2843.1,GhM_A08G1645.1,GhM_A08G0504.1,GhM_A11G1259.1,GhM_A10G2978.1,GhM_A12G1599.1,GhM_A11G2299.1,GhM_D11G2271.1,GhM_A13G2361.1,GhM_D13G2261.1,GhM_D01G1925.1,GhM_D08G0485.1,GhM_D02G1932.1,GhM_D08G1601.1,GhM_D05G3629.1,GhM_D11G1260.1,GhM_D05G3630.1,GhM_D07G1549.1,GhM_D12G1546.1,GhM_D07G2748.1,GhM_A05G4284.1,GhM_D04G0652.1,GhM_A07G2841.1,GhM_D08G0141.1,GhM_A08G0153.1,GhM_D09G0334.1 | 32 | 0 | Gossypium | Cotton | |||
| - | AT2G22430||AT4G40060||AT1G69780 | ATHB16, ATHB-16; ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor||ATHB6; ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor||ATHB13; ATHB13; DNA binding / sequence-specific DNA binding / transcription factor | GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0009965|leaf morphogenesis;GO:0009744|response to sucrose stimulus;GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0045941|positive regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0009788|negative regulation of abscisic acid mediated signaling pathway;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009637|response to blue light;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0030308|negative regulation of cell growth;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway;GO:0048573|photoperiodism, flowering;GO:0048826|cotyledon morphogenesis | GhM_A02G1709.1,GhM_D03G0426.1,GhM_A05G4096.1,GhM_A05G3511.1,GhM_A03G1318.1,GhM_D02G1332.1,GhM_A13G0872.1,GhM_D13G0810.1,GhM_D05G3461.1,GhM_D12G2745.1,GhM_A06G0377.1,GhM_D06G0387.1,GhM_A11G1334.1,GhM_D13G1824.1,GhM_A11G1777.1,GhM_D10G1993.1,GhM_A12G1176.1,GhM_D12G0935.1,GhM_A12G1432.1,GhM_D06G1927.1,GhM_D01G1661.1,GhM_D08G1031.1,GhM_D01G2199.1,GhM_D12G1976.1,GhM_D07G0090.1,GhM_D08G2199.1,GhM_D12G0533.1,GhM_D10G0856.1,GhM_D11G3151.1,GhM_D09G2019.1,GhM_D02G0160.1,GhM_D13G0627.1 | 32 | 0 | Gossypium | Cotton | |||
| TA16:GhM_D05G3588.1,GhM_D05G3591.1,GhM_D05G3592.1,GhM_D05G3593.1,GhM_D05G3594.1,GhM_D05G3595.1,GhM_D05G3596.1,GhM_D05G3597.1,GhM_D05G3598.1,GhM_D05G3599.1,GhM_D05G3600.1,GhM_D05G3601.1,GhM_D05G3602.1,GhM_D05G3603.1,GhM_D05G3604.1;TA126:GhM_A05G3635.1,GhM_A05G3636.1,GhM_A05G3637.1,GhM_A05G3638.1,GhM_A05G3639.1,GhM_A05G3640.1,GhM_A05G3641.1;TA1969:GhM_D05G3589.1,GhM_D05G3590.1;TA465:GhM_D13G0754.1,GhM_D13G0758.1,GhM_D13G0760.1,GhM_D13G0761.1 | AT1G14420||AT3G01270||AT2G02720||AT3G24230||AT4G13710||AT5G48900 | pectate lyase family protein||AT59; AT59; lyase/ pectate lyase | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0009664|plant-type cell wall organization;GO:0030570|pectate lyase activity;GO:0016829|lyase activity | GhM_A13G0578.1,GhM_A13G0849.1,GhM_A11G2967.1,GhM_D11G2900.1 | 32 | 4 | Gossypium | Cotton | |||
| TA9:GhM_D11G3515.1,GhM_D11G3518.1,GhM_D11G3519.1,GhM_D11G3520.1,GhM_D11G3521.1,GhM_D11G3522.1,GhM_D11G3523.1,GhM_D11G3524.1,GhM_D11G3525.1,GhM_D11G3526.1,GhM_D11G3527.1,GhM_D11G3528.1,GhM_D11G3529.1,GhM_D11G3530.1,GhM_D11G3531.1,GhM_D11G3532.1,GhM_D11G3535.1;TA72:GhM_A11G3615.1,GhM_A11G3617.1,GhM_A11G3618.1,GhM_A11G3622.1,GhM_A11G3628.1,GhM_A11G3629.1,GhM_A11G3630.1,GhM_A11G3632.1;TA592:GhM_A11G3676.1,GhM_A11G3679.1,GhM_A11G3680.1;TA893:GhM_D11G3597.1,GhM_D11G3599.1,GhM_D11G3600.1 | AT5G35450||AT1G58848||AT1G50180||AT5G48620||AT1G53350||AT1G58807||AT5G43470||AT1G58390||AT1G58410 | ATP binding / protein binding||RPP8, HRT, RCY1; RPP8 (RECOGNITION OF PERONOSPORA PARASITICA 8); nucleotide binding||disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative||ATP binding||disease resistance protein (CC-NBS-LRR class), putative | GO:0005515|protein binding;GO:0051607|defense response to virus;GO:0000166|nucleotide binding;GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0009416|response to light stimulus;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0051707|response to other organism | GhM_Scaf207G332.1 | 32 | 4 | Gossypium | Cotton | |||
| TA57:GhM_A01G2526.1,GhM_A01G2528.1,GhM_A01G2533.1,GhM_A01G2534.1,GhM_A01G2535.1,GhM_A01G2536.1,GhM_A01G2537.1,GhM_A01G2538.1,GhM_A01G2541.1;TA107:GhM_D01G2460.1,GhM_D01G2461.1,GhM_D01G2463.1,GhM_D01G2464.1,GhM_D01G2465.1,GhM_D01G2466.1,GhM_D01G2468.1;TA3560:GhM_A09G1714.1,GhM_A09G1717.1;TA259:GhM_D09G1614.1,GhM_D09G1615.1,GhM_D09G1616.1,GhM_D09G1617.1,GhM_D09G1618.1;TA310:GhM_A09G1784.1,GhM_A09G1785.1,GhM_A09G1786.1,GhM_A09G1787.1,GhM_A09G1788.1 | AT1G52340||AT3G51680||AT2G47140||AT3G26770 | short-chain dehydrogenase/reductase (SDR) family protein||ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1; ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase | GO:0009688|abscisic acid biosynthetic process;GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0010301|xanthoxin dehydrogenase activity;GO:0005488|binding;GO:0006561|proline biosynthetic process;GO:0010182|sugar mediated signaling pathway;GO:0009408|response to heat;GO:0005829|cytosol;GO:0010115|regulation of abscisic acid biosynthetic process;GO:0009414|response to water deprivation;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D10G2492.1,GhM_D01G2467.1,GhM_A11G4000.1,GhM_D11G3897.1 | 32 | 5 | Gossypium | Cotton | |||
| - | AT4G35020||AT3G51300||AT4G28950||AT5G45970||AT3G51290||AT2G44690||AT2G17800||AT1G75840||AT5G62880 | ARAC7, ATROP9, ATRAC7, RAC7, ROP9; ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding||ARAC3, ROP6, RHO1PS, ATROP6; ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase||ARAC1, ATGP2, ATRAC1, ROP3, ATROP3; ARAC1; GTP binding||ARAC2, ROP7, ATRAC2, ATROP7; ARAC2 (ARABIDOPSIS RAC-LIKE 2); GTP binding||proline-rich family protein||ARAC10, ATRAC10, ATROP11; ARAC10; GTP binding||ARAC5, ATGP3, ROP4, ATROP4; ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase||ARAC9, ATROP8, ROP8; ARAC9; GTP binding||ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1; ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding | GO:0009860|pollen tube growth;GO:0003924|GTPase activity;GO:0040007|growth;GO:0017157|regulation of exocytosis;GO:0009524|phragmoplast;GO:0005886|plasma membrane;GO:0005525|GTP binding;GO:0006499|N-terminal protein myristoylation;GO:0032794|GTPase activating protein binding;GO:0005730|nucleolus;GO:0005819|spindle;GO:0045177|apical part of cell;GO:0051650|establishment of vesicle localization;GO:0005737|cytoplasm;GO:0030833|regulation of actin filament polymerization;GO:0009734|auxin mediated signaling pathway;GO:0009738|abscisic acid mediated signaling pathway;GO:0005515|protein binding;GO:0005634|nucleus;GO:0030834|regulation of actin filament depolymerization;GO:0005622|intracellular;GO:0015031|protein transport | GhM_A01G2099.1,GhM_D01G2069.1,GhM_A02G1073.1,GhM_D02G1103.1,GhM_A05G2070.1,GhM_A05G0265.1,GhM_D05G0275.1,GhM_A06G0762.1,GhM_A05G2871.1,GhM_D05G2872.1,GhM_A06G0029.1,GhM_D06G0023.1,GhM_A06G1761.1,GhM_D06G1689.1,GhM_A06G2567.1,GhM_D06G2560.1,GhM_A08G0722.1,GhM_D08G0689.1,GhM_A08G1883.1,GhM_D08G1834.1,GhM_A10G0316.1,GhM_D10G0301.1,GhM_A11G2016.1,GhM_D11G2004.1,GhM_D03G0077.1,GhM_A12G0404.1,GhM_D12G0388.1,GhM_A12G3366.1,GhM_D12G3252.1,GhM_D05G2085.1,GhM_D06G0762.1 | 31 | 0 | Gossypium | Cotton | |||
| TA2279:GhM_D07G2664.1,GhM_D07G2668.1 | AT4G14960||AT4G28540||AT1G04820||AT5G19770 | CKL6, PAPK1; CKL6 (CASEIN KINASE I-LIKE 6); kinase/ protein serine/threonine kinase||TUA6; TUA6; structural constituent of cytoskeleton||TUA4; TUA4; structural constituent of cytoskeleton||TUA3; TUA3; structural constituent of cytoskeleton | GO:0046686|response to cadmium ion;GO:0006468|protein amino acid phosphorylation;GO:0045298|tubulin complex;GO:0000226|microtubule cytoskeleton organization;GO:0005886|plasma membrane;GO:0004674|protein serine/threonine kinase activity;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005773|vacuole;GO:0005200|structural constituent of cytoskeleton;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0007017|microtubule-based process;GO:0005874|microtubule;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0009506|plasmodesma | GhM_A02G0953.1,GhM_A03G0255.1,GhM_A03G2393.1,GhM_A04G1532.1,GhM_A05G2242.1,GhM_A05G2411.1,GhM_A06G1471.1,GhM_A07G2761.1,GhM_A11G0885.1,GhM_A11G2900.1,GhM_A11G3794.1,GhM_A12G0735.1,GhM_A12G1073.1,GhM_A12G1213.1,GhM_A13G1346.1,GhM_A13G2732.1,GhM_D02G0945.1,GhM_D02G2411.1,GhM_D04G2017.1,GhM_D05G2423.1,GhM_D06G1354.1,GhM_D13G2626.1,GhM_D11G0899.1,GhM_D13G1249.1,GhM_D11G2857.1,GhM_D11G3712.1,GhM_D12G0971.1,GhM_D12G0521.1,GhM_A11G3134.1 | 31 | 1 | Gossypium | Cotton | |||
| TA59:GhM_D10G0062.1,GhM_D10G0063.1,GhM_D10G0064.1,GhM_D10G0065.1,GhM_D10G0066.1,GhM_D10G0067.1,GhM_D10G0069.1,GhM_D10G0070.1,GhM_D10G0071.1;TA130:GhM_A10G0080.1,GhM_A10G0081.1,GhM_A10G0082.1,GhM_A10G0085.1,GhM_A10G0086.1,GhM_A10G0087.1;TA1066:GhM_A06G2369.1,GhM_A06G2370.1,GhM_A06G2373.1;TA774:GhM_D06G2377.1,GhM_D06G2378.1,GhM_D06G2380.1;TA1685:GhM_D02G1214.1,GhM_D02G1217.1 | AT1G30700||AT1G30720||AT1G26420||AT4G20800||AT1G26390||AT4G20840||AT5G44400||AT1G30760||AT1G11770||AT1G34575 | FAD binding / catalytic/ electron carrier/ oxidoreductase||FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0048046|apoplast;GO:0016491|oxidoreductase activity;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0050660|FAD binding;GO:0009055|electron carrier activity | GhM_A10G1852.1,GhM_D05G3581.1,GhM_A10G1083.1,GhM_A10G1084.1,GhM_A02G1006.1,GhM_A02G1007.1,GhM_A06G1298.1,GhM_D06G1524.1 | 31 | 5 | Gossypium | Cotton | |||
| TA44:GhM_D06G0141.1,GhM_D06G0144.1,GhM_D06G0146.1,GhM_D06G0147.1,GhM_D06G0148.1,GhM_D06G0149.1,GhM_D06G0150.1,GhM_D06G0151.1,GhM_D06G0152.1,GhM_D06G0153.1;TA183:GhM_A06G0144.1,GhM_A06G0145.1,GhM_A06G0146.1,GhM_A06G0147.1,GhM_A06G0148.1,GhM_A06G0149.1;TA754:GhM_D06G0142.1,GhM_D06G0143.1,GhM_D06G0145.1;TA497:GhM_A05G2218.1,GhM_A05G2219.1,GhM_A05G2220.1,GhM_A05G2221.1;TA727:GhM_D05G2237.1,GhM_D05G2239.1,GhM_D05G2240.1;TA3170:GhM_A05G2217.1,GhM_A05G2222.1 | AT4G31940||AT4G31950||AT4G31970 | CYP82C2; CYP82C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP82C3; CYP82C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP82C4; CYP82C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D06G0583.1,GhM_D05G3555.1,GhM_A05G3594.1 | 31 | 6 | Gossypium | Cotton | |||
| - | AT5G13160||AT5G18610||AT5G02800||AT3G20530||AT1G61860||AT1G07870||AT3G07070 | PBS1; PBS1 (avrPphB susceptible 1); kinase/ protein serine/threonine kinase||protein kinase family protein||protein kinase, putative | GO:0005515|protein binding;GO:0005792|microsome;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0006952|defense response;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0245.1,GhM_D01G0217.1,GhM_A10G2634.1,GhM_A01G0290.1,GhM_D01G0259.1,GhM_A01G2690.1,GhM_A01G0839.1,GhM_D01G0802.1,GhM_A11G3492.1,GhM_D11G3411.1,GhM_A09G2929.1,GhM_A05G3400.1,GhM_D05G3377.1,GhM_A06G1952.1,GhM_D06G1932.1,GhM_A10G0161.1,GhM_D10G0148.1,GhM_A10G2022.1,GhM_A09G0879.1,GhM_D09G0816.1,GhM_D10G1963.1,GhM_D09G2793.1,GhM_A08G0031.1,GhM_D08G0025.1,GhM_D13G2838.1,GhM_A13G2937.1,GhM_D10G2548.1,GhM_A11G1607.1,GhM_D11G1600.1,GhM_D01G2621.1 | 30 | 0 | Gossypium | Cotton | |||
| - | AT5G42080||AT3G61760||AT3G60190||AT1G14830||AT4G10955||AT1G74960 | ADL1C, ADL5, DRP1C; ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase||ADL1, ADL1A, AG68, DRP1A, RSW9; ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding||FAB1, KAS2; FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase||ADL1B; ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B); GTP binding / GTPase||ADL4, ADLP2, EDR3, DRP1E, ADL1E; ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase||lipase class 3 family protein | GO:0003924|GTPase activity;GO:0010051|xylem and phloem pattern formation;GO:0046686|response to cadmium ion;GO:0010152|pollen maturation;GO:0007005|mitochondrion organization;GO:0045334|clathrin-coated endocytic vesicle;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005525|GTP binding;GO:0000911|cytokinesis by cell plate formation;GO:0009504|cell plate;GO:0016020|membrane;GO:0005773|vacuole;GO:0009920|cell plate formation involved in plant-type cell wall biogenesis;GO:0009793|embryonic development ending in seed dormancy;GO:0048488|synaptic vesicle endocytosis;GO:0005938|cell cortex;GO:0010091|trichome branching;GO:0000266|mitochondrial fission;GO:0005874|microtubule;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0030276|clathrin binding;GO:0009535|chloroplast thylakoid membrane | GhM_A01G0653.1,GhM_A13G1521.1,GhM_D11G2094.1,GhM_D01G1910.1,GhM_D09G2207.1,GhM_A05G2781.1,GhM_D08G1168.1,GhM_A05G2782.1,GhM_A10G1507.1,GhM_A09G2308.1,GhM_A05G4727.1,GhM_D08G1429.1,GhM_A07G1677.1,GhM_D07G1643.1,GhM_A08G1444.1,GhM_D12G2548.1,GhM_A01G1849.1,GhM_D01G1764.1,GhM_A12G1983.1,GhM_D12G1894.1,GhM_A12G2658.1,GhM_A13G0151.1,GhM_A12G2930.1,GhM_D12G2818.1,GhM_D08G1428.1,GhM_D13G0148.1,GhM_D05G1491.1,GhM_D08G0172.1,GhM_D02G1169.1,GhM_A06G1814.1 | 30 | 0 | Gossypium | Cotton | |||
| TA1411:GhM_A12G2157.1,GhM_A12G2159.1 | AT1G80210||AT5G05800||AT3G58490 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: mov34 family protein (TAIR:AT3G06820.2); Has 785 Blast hits to 706 proteins in 167 species: Archae - 0; Bacteria - 3; Metazoa - 423; Fungi - 147; Plants - 120; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink).||phosphatidic acid phosphatase family protein / PAP2 family protein||unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1410.1,GhM_A01G1611.1,GhM_A02G0711.1,GhM_A02G1052.1,GhM_A02G1228.1,GhM_A03G1047.1,GhM_A06G0464.1,GhM_A06G1438.1,GhM_A06G1534.1,GhM_A08G0058.1,GhM_A10G2262.1,GhM_A11G2262.1,GhM_A11G3591.1,GhM_A12G2038.1,GhM_D06G0533.1,GhM_D08G1068.1,GhM_D04G1680.1,GhM_D10G1230.1,GhM_D06G1613.1,GhM_A13G0760.1,GhM_D04G0738.1,GhM_D04G1094.1,GhM_D02G0694.1,GhM_D07G2082.1,GhM_D10G1610.1,GhM_A02G0710.1,GhM_A07G1759.1,GhM_D11G2850.1 | 30 | 1 | Gossypium | Cotton | |||
| - | AT3G16630||AT1G12430||AT2G30860||AT4G22910 | FZR2; FZR2 (FIZZY-RELATED 2); signal transducer||ATGSTF9, GLUTTR, ATGSTF7; ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase||ATKINESIN-13A, KINESIN-13A; KINESIN-13A; ATP binding / microtubule motor||PAK, ARK3; ARK3 (ARMADILLO REPEAT KINESIN 3); ATP binding / binding / microtubule motor | GO:0010090|trichome morphogenesis;GO:0046686|response to cadmium ion;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005886|plasma membrane;GO:0007018|microtubule-based movement;GO:0010043|response to zinc ion;GO:0003777|microtubule motor activity;GO:0005834|heterotrimeric G-protein complex;GO:0009570|chloroplast stroma;GO:0006952|defense response;GO:0043295|glutathione binding;GO:0005773|vacuole;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0016049|cell growth;GO:0010091|trichome branching;GO:0005875|microtubule associated complex;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005488|binding;GO:0005795|Golgi stack;GO:0004871|signal transducer activity;GO:0009579|thylakoid;GO:0042023|DNA endoreduplication;GO:0007165|signal transduction;GO:0004602|glutathione peroxidase activity;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A01G0892.1,GhM_A04G0127.1,GhM_D05G4278.1,GhM_A04G1288.1,GhM_D07G1384.1,GhM_A11G3135.1,GhM_A11G1845.1,GhM_D11G1836.1,GhM_D01G2197.1,GhM_D06G1000.1,GhM_D01G2392.1,GhM_D11G3887.1,GhM_D02G0673.1,GhM_D10G1479.1,GhM_D04G1307.1,GhM_D08G2559.1,GhM_D08G1431.1,GhM_D05G3088.1,GhM_D11G1696.1,GhM_D08G2261.1,GhM_A08G2315.1,GhM_A12G2793.1,GhM_A09G2346.1,GhM_D09G2246.1,GhM_D12G2681.1,GhM_D13G1687.1,GhM_D10G2169.1,GhM_D02G1264.1,GhM_D08G2072.1 | 29 | 0 | Gossypium | Cotton | |||
| - | AT2G24170||AT5G10840||AT3G13772||AT5G25100||AT4G30920||AT2G24200 | cytosol aminopeptidase||cytosol aminopeptidase family protein||endomembrane protein 70, putative | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0019538|protein metabolic process;GO:0046686|response to cadmium ion;GO:0030145|manganese ion binding;GO:0005794|Golgi apparatus;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A05G0605.1,GhM_D05G0611.1,GhM_A05G0654.1,GhM_D05G0674.1,GhM_A05G1505.1,GhM_D05G1519.1,GhM_A06G1177.1,GhM_D06G1208.1,GhM_A06G1175.1,GhM_A07G0352.1,GhM_D07G0351.1,GhM_A12G2934.1,GhM_D07G0706.1,GhM_A13G2441.1,GhM_D13G2338.1,GhM_D03G1386.1,GhM_D04G1705.1,GhM_D05G0612.1,GhM_A06G1176.1,GhM_A13G2440.1,GhM_A06G1254.1,GhM_D06G1277.1,GhM_A06G2465.1,GhM_D06G2462.1,GhM_A10G0656.1,GhM_D10G0625.1,GhM_A13G2407.1,GhM_D13G2307.1,GhM_D13G2337.1 | 29 | 0 | Gossypium | Cotton | |||
| TA17:GhM_D10G2062.1,GhM_D10G2063.1,GhM_D10G2064.1,GhM_D10G2065.1,GhM_D10G2066.1,GhM_D10G2067.1,GhM_D10G2068.1,GhM_D10G2070.1,GhM_D10G2071.1,GhM_D10G2073.1,GhM_D10G2075.1,GhM_D10G2076.1,GhM_D10G2077.1,GhM_D10G2078.1,GhM_D10G2080.1;TA27:GhM_A10G2128.1,GhM_A10G2129.1,GhM_A10G2132.1,GhM_A10G2133.1,GhM_A10G2135.1,GhM_A10G2136.1,GhM_A10G2137.1,GhM_A10G2138.1,GhM_A10G2141.1,GhM_A10G2142.1,GhM_A10G2143.1,GhM_A10G2146.1 | - | - | - | GhM_A04G1344.1,GhM_D04G1827.1 | 29 | 2 | Gossypium | Cotton | |||
| TA12:GhM_D10G2592.1,GhM_D10G2593.1,GhM_D10G2594.1,GhM_D10G2595.1,GhM_D10G2596.1,GhM_D10G2597.1,GhM_D10G2598.1,GhM_D10G2599.1,GhM_D10G2600.1,GhM_D10G2601.1,GhM_D10G2602.1,GhM_D10G2604.1,GhM_D10G2605.1,GhM_D10G2607.1,GhM_D10G2609.1,GhM_D10G2610.1;TA1211:GhM_A10G2680.1,GhM_A10G2682.1;TA39:GhM_A10G2679.1,GhM_A10G2681.1,GhM_A10G2684.1,GhM_A10G2686.1,GhM_A10G2687.1,GhM_A10G2688.1,GhM_A10G2689.1,GhM_A10G2691.1,GhM_A10G2693.1,GhM_A10G2696.1 | AT5G43240||AT5G01150||AT3G09120||AT3G09110||AT5G01130 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G2685.1 | 29 | 3 | Gossypium | Cotton | |||
| TA662:GhM_D01G2643.1,GhM_D01G2644.1,GhM_D01G2645.1;TA797:GhM_A01G2713.1,GhM_A01G2714.1,GhM_A01G2715.1;TA1083:GhM_A08G0049.1,GhM_A08G0050.1,GhM_A08G0051.1 | AT5G02560||AT5G59870||AT5G27670||AT1G54690||AT1G51060||AT1G08880||AT5G54640 | HTA6; HTA6; DNA binding||HTA1, RAT5; RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding||HTA10; HTA10; DNA binding||HTA7; HTA7 (HISTONE H2A 7); DNA binding||HTA12; HTA12; DNA binding||HTA3, H2AXB, G-H2AX, GAMMA-H2AX; GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding||HTA5, H2AXA, G-H2AX, GAMMA-H2AX; H2AXA; DNA binding | GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0009617|response to bacterium;GO:0009294|DNA mediated transformation;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0000786|nucleosome | GhM_D08G0041.1,GhM_D08G2633.1,GhM_A08G2691.1,GhM_A11G3349.1,GhM_D11G3263.1,GhM_A08G0896.1,GhM_D08G0854.1,GhM_A08G0288.1,GhM_D08G0278.1,GhM_D11G3193.1,GhM_A08G2401.1,GhM_A13G1912.1,GhM_A08G0567.1,GhM_D13G1808.1,GhM_A08G2735.1,GhM_D08G0538.1,GhM_A11G3270.1,GhM_A13G2310.1,GhM_D08G2676.1,GhM_D08G2344.1 | 29 | 3 | Gossypium | Cotton | |||
| TA48:GhM_A11G0288.1,GhM_A11G0289.1,GhM_A11G0290.1,GhM_A11G0291.1,GhM_A11G0292.1,GhM_A11G0293.1,GhM_A11G0295.1,GhM_A11G0296.1,GhM_A11G0297.1;TA86:GhM_D11G0276.1,GhM_D11G0277.1,GhM_D11G0278.1,GhM_D11G0279.1,GhM_D11G0280.1,GhM_D11G0281.1,GhM_D11G0282.1,GhM_D11G0283.1;TA1098:GhM_A08G2239.1,GhM_A08G2240.1,GhM_A08G2243.1;TA253:GhM_D08G2187.1,GhM_D08G2188.1,GhM_D08G2189.1,GhM_D08G2190.1,GhM_D08G2191.1 | AT2G45180||AT1G12090||AT4G12510||AT1G62510||AT1G12100 | ELP; ELP (EXTENSIN-LIKE PROTEIN); lipid binding||protease inhibitor/seed storage/lipid transfer protein (LTP) family protein||lipid binding | GO:0008289|lipid binding;GO:0012505|endomembrane system;GO:0009535|chloroplast thylakoid membrane;GO:0006869|lipid transport | GhM_A12G2743.1,GhM_D12G2630.1,GhM_A07G0376.1,GhM_D07G0375.1 | 29 | 4 | Gossypium | Cotton | |||
| TA58:GhM_D09G0232.1,GhM_D09G0233.1,GhM_D09G0234.1,GhM_D09G0235.1,GhM_D09G0237.1,GhM_D09G0239.1,GhM_D09G0240.1,GhM_D09G0241.1,GhM_D09G0243.1;TA100:GhM_A09G0257.1,GhM_A09G0258.1,GhM_A09G0259.1,GhM_A09G0260.1,GhM_A09G0261.1,GhM_A09G0262.1,GhM_A09G0264.1,GhM_A09G0265.1;TA99:GhM_A09G0229.1,GhM_A09G0235.1,GhM_A09G0237.1,GhM_A09G0241.1,GhM_A09G0243.1,GhM_A09G0244.1,GhM_A09G0246.1,GhM_A09G0247.1;TA425:GhM_D09G0220.1,GhM_D09G0221.1,GhM_D09G0222.1,GhM_D09G0224.1 | AT4G08850||AT1G35710 | leucine-rich repeat transmembrane protein kinase, putative||kinase | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 29 | 4 | Gossypium | Cotton | |||
| TA816:GhM_D08G0044.1,GhM_D08G0054.1,GhM_D08G0057.1;TA3423:GhM_A08G0036.1,GhM_A08G0039.1;TA3426:GhM_A08G0069.1,GhM_A08G0072.1;TA2290:GhM_D08G0029.1,GhM_D08G0030.1 | AT1G07660 | histone H4 | GO:0005886|plasma membrane;GO:0009507|chloroplast;GO:0006334|nucleosome assembly;GO:0003677|DNA binding | GhM_A01G2726.1,GhM_A02G1848.1,GhM_A03G0517.1,GhM_A03G0559.1,GhM_A04G1064.1,GhM_A05G1091.1,GhM_A08G0055.1,GhM_A10G0538.1,GhM_A13G2921.1,GhM_A13G2936.1,GhM_D01G2654.1,GhM_D03G0412.1,GhM_D03G1572.1,GhM_D03G1612.1,GhM_D05G1104.1,GhM_D04G1133.1,GhM_D04G1525.1,GhM_D10G0512.1,GhM_D13G2820.1,GhM_D13G2837.1 | 29 | 4 | Gossypium | Cotton | |||
| - | AT4G35190||AT5G06300||AT3G53450||AT2G28305 | unknown protein||carboxy-lyase | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005829|cytosol;GO:0016831|carboxy-lyase activity;GO:0009089|lysine biosynthetic process via diaminopimelate | GhM_A01G0038.1,GhM_D01G0021.1,GhM_A01G1171.1,GhM_D01G1146.1,GhM_A01G1227.1,GhM_D01G1198.1,GhM_A01G1657.1,GhM_A04G0971.1,GhM_A01G2152.1,GhM_D01G2127.1,GhM_A01G2519.1,GhM_D01G2453.1,GhM_A01G2659.1,GhM_D01G2588.1,GhM_A03G0458.1,GhM_D03G1671.1,GhM_A05G1150.1,GhM_A04G0830.1,GhM_D04G1118.1,GhM_A05G2026.1,GhM_D05G2038.1,GhM_A09G1707.1,GhM_A05G2094.1,GhM_D05G2113.1,GhM_D04G1428.1,GhM_D05G1167.1,GhM_D09G1608.1,GhM_A07G1913.1 | 28 | 0 | Gossypium | Cotton | |||
| - | AT5G62670||AT2G18960||AT3G42640||AT2G24520||AT1G80660||AT1G17260 | AHA5; AHA5 (Arabidopsis H(+)-ATPase 5); ATPase||AHA1, PMA, OST2; AHA1 (ARABIDOPSIS H+ ATPASE 1); ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism / protein binding||AHA8; AHA8 (Arabidopsis H(+)-ATPase 8); ATPase||AHA9; AHA9; hydrogen-exporting ATPase, phosphorylative mechanism||AHA10; AHA10 (Autoinhibited H(+)-ATPase isoform 10); ATPase/ ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / cation-transporting ATPase||AHA11; AHA11 (Arabidopsis H(+)-ATPase 11); ATPase | GO:0019829|cation-transporting ATPase activity;GO:0008152|metabolic process;GO:0007033|vacuole organization;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0015992|proton transport;GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism;GO:0005886|plasma membrane;GO:0010023|proanthocyanidin biosynthetic process;GO:0006812|cation transport;GO:0010119|regulation of stomatal movement;GO:0016020|membrane;GO:0007035|vacuolar acidification;GO:0005773|vacuole;GO:0009737|response to abscisic acid stimulus;GO:0006754|ATP biosynthetic process;GO:0009414|response to water deprivation;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0016887|ATPase activity | GhM_A03G0872.1,GhM_D03G1102.1,GhM_A05G0044.1,GhM_D05G0044.1,GhM_A05G0548.1,GhM_D05G0572.1,GhM_A05G0705.1,GhM_D05G0726.1,GhM_A05G1334.1,GhM_D05G1350.1,GhM_A06G1388.1,GhM_D06G1466.1,GhM_A10G0770.1,GhM_A06G1498.1,GhM_D06G1329.1,GhM_A08G0273.1,GhM_D08G0264.1,GhM_A09G0275.1,GhM_D09G0255.1,GhM_A10G0547.1,GhM_D10G0521.1,GhM_A12G2694.1,GhM_A13G2396.1,GhM_D13G2294.1,GhM_A13G2460.1,GhM_D13G2354.1,GhM_D10G0874.1,GhM_D12G2582.1 | 28 | 0 | Gossypium | Cotton | |||
| TA4:GhM_D05G3898.1,GhM_D05G3902.1,GhM_D05G3904.1,GhM_D05G3905.1,GhM_D05G3908.1,GhM_D05G3909.1,GhM_D05G3910.1,GhM_D05G3911.1,GhM_D05G3913.1,GhM_D05G3914.1,GhM_D05G3916.1,GhM_D05G3917.1,GhM_D05G3918.1,GhM_D05G3919.1,GhM_D05G3920.1,GhM_D05G3921.1,GhM_D05G3922.1,GhM_D05G3923.1,GhM_D05G3924.1,GhM_D05G3925.1;TA94:GhM_A04G0458.1,GhM_A04G0459.1,GhM_A04G0460.1,GhM_A04G0461.1,GhM_A04G0462.1,GhM_A04G0463.1,GhM_A04G0464.1,GhM_A04G0466.1 | AT2G27420||AT3G49340||AT2G34080 | cysteine proteinase, putative | GO:0006508|proteolysis;GO:0012505|endomembrane system | - | 28 | 2 | Gossypium | Cotton | |||
| TA877:GhM_D10G2892.1,GhM_D10G2893.1,GhM_D10G2895.1;TA1221:GhM_A10G2933.1,GhM_A10G2934.1 | AT3G61430||AT4G00430||AT1G01620||AT2G16850||AT2G37170||AT3G53420||AT4G23400 | PIP1C, TMP-B, PIP1;3; PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel||PIP1D, PIP1;5; PIP1;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;5); water channel||PIP2B, PIP2;2; PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel||TMP-C, PIP1;4, PIP1E; PIP1;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;4); water channel||PIP3B, PIP2;8; PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel||PIP2A, PIP2, PIP2;1; PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel||PIP1A, ATPIP1, PIP1, PIP1;1; PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel | GO:0015250|water channel activity;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006810|transport;GO:0005739|mitochondrion;GO:0006833|water transport;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A03G0299.1,GhM_A06G2152.1,GhM_A08G2389.1,GhM_A09G2026.1,GhM_D06G2132.1,GhM_D13G0190.1,GhM_A13G0203.1,GhM_D03G1825.1,GhM_D08G2333.1,GhM_D09G1928.1,GhM_A11G4125.1,GhM_D11G1049.1,GhM_D11G4016.1,GhM_A01G2113.1,GhM_A08G0022.1,GhM_D08G0016.1,GhM_A08G2565.1,GhM_D09G1770.1,GhM_A01G0044.1,GhM_A11G1036.1,GhM_D07G1711.1,GhM_D08G0937.1,GhM_A09G1872.1 | 28 | 2 | Gossypium | Cotton | |||
| TA50:GhM_A11G3509.1,GhM_A11G3510.1,GhM_A11G3511.1,GhM_A11G3512.1,GhM_A11G3513.1,GhM_A11G3514.1,GhM_A11G3515.1,GhM_A11G3516.1,GhM_A11G3517.1;TA121:GhM_D11G3421.1,GhM_D11G3422.1,GhM_D11G3423.1,GhM_D11G3424.1,GhM_D11G3425.1,GhM_D11G3426.1,GhM_D11G3428.1;TA272:GhM_D11G3435.1,GhM_D11G3436.1,GhM_D11G3438.1,GhM_D11G3440.1,GhM_D11G3441.1;TA2660:GhM_D11G3680.1,GhM_D11G3690.1 | AT5G23960||AT3G29410||AT1G31950||AT1G70080||AT3G14490 | ATTPS21, TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase||terpene synthase/cyclase family protein | GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0016106|sesquiterpenoid biosynthetic process;GO:0016829|lyase activity;GO:0051762|sesquiterpene biosynthetic process;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A11G3153.1,GhM_A11G3154.1,GhM_A11G3608.1,GhM_D11G3080.1,GhM_A11G3765.1 | 28 | 4 | Gossypium | Cotton | |||
| TA80:GhM_D05G3364.1,GhM_D05G3365.1,GhM_D05G3366.1,GhM_D05G3368.1,GhM_D05G3369.1,GhM_D05G3370.1,GhM_D05G3371.1,GhM_D05G3372.1;TA501:GhM_A05G3347.1,GhM_A05G3349.1,GhM_A05G3350.1,GhM_A05G3351.1;TA1042:GhM_A05G3392.1,GhM_A05G3393.1,GhM_A05G3395.1;TA291:GhM_A05G3361.1,GhM_A05G3362.1,GhM_A05G3363.1,GhM_A05G3365.1,GhM_A05G3366.1;TA1966:GhM_D05G3336.1,GhM_D05G3337.1;TA3207:GhM_A05G3391.1,GhM_A05G3394.1 | AT3G14470||AT3G14460||AT5G46260 | disease resistance protein (TIR-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0000166|nucleotide binding;GO:0045087|innate immune response;GO:0006915|apoptosis;GO:0006952|defense response;GO:0007165|signal transduction;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_D05G3324.1,GhM_D05G3335.1,GhM_D09G1785.1,GhM_D05G3338.1 | 28 | 6 | Gossypium | Cotton | |||
| - | AT3G17430||AT5G15090||AT3G01280 | phosphate translocator-related||VDAC3, ATVDAC3; VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel||VDAC1, ATVDAC1; VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel | GO:0012505|endomembrane system;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006820|anion transport;GO:0009536|plastid;GO:0008308|voltage-gated anion channel activity;GO:0005739|mitochondrion;GO:0009617|response to bacterium;GO:0005730|nucleolus;GO:0005741|mitochondrial outer membrane;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0008514|organic anion transmembrane transporter activity;GO:0016020|membrane;GO:0042742|defense response to bacterium;GO:0005773|vacuole | GhM_A01G0334.1,GhM_D01G0318.1,GhM_A09G0936.1,GhM_D09G0875.1,GhM_A11G3655.1,GhM_D07G2680.1,GhM_A01G1328.1,GhM_D02G1440.1,GhM_A02G1092.1,GhM_A07G2775.1,GhM_A03G1229.1,GhM_D09G0261.1,GhM_A03G1349.1,GhM_D02G1338.1,GhM_A05G3506.1,GhM_D05G3456.1,GhM_A03G1925.1,GhM_D02G1977.1,GhM_A09G0289.1,GhM_A12G2141.1,GhM_D12G2049.1,GhM_D01G1301.1,GhM_D11G2591.1,GhM_D02G1125.1,GhM_A12G1440.1,GhM_D05G1699.1,GhM_D08G2572.1 | 27 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G2057.1,GhM_D04G1508.1,GhM_A06G0434.1,GhM_D07G1025.1,GhM_A06G1940.1,GhM_D05G3622.1,GhM_D02G1653.1,GhM_D13G1206.1,GhM_D05G3279.1,GhM_D07G0747.1,GhM_D02G0753.1,GhM_D12G1009.1,GhM_D04G0952.1,GhM_D10G1621.1,GhM_D05G3278.1,GhM_D12G0773.1,GhM_D04G1063.1,GhM_D09G0610.1,GhM_D08G0832.1,GhM_D06G0703.1,GhM_D04G1990.1,GhM_D13G1789.1,GhM_D08G1542.1,GhM_D10G0827.1,GhM_D13G2223.1,GhM_D10G2989.1,GhM_D07G2248.1 | 27 | 0 | Gossypium | Cotton | |||
| TA1622:GhM_D01G2589.1,GhM_D01G2590.1 | AT2G37170||AT3G53420||AT3G54820||AT2G16850||AT4G35100 | PIP2B, PIP2;2; PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel||PIP2D, PIP2;5; PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel||PIP3B, PIP2;8; PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel||PIP3, PIP3A, PIP2;7, SIMIP; PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel||PIP2A, PIP2, PIP2;1; PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel | GO:0015250|water channel activity;GO:0009507|chloroplast;GO:0006810|transport;GO:0046658|anchored to plasma membrane;GO:0006833|water transport;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A01G2660.1,GhM_D09G1770.1,GhM_A09G1872.1,GhM_D04G1435.1,GhM_A04G0977.1,GhM_A08G2565.1,GhM_A10G2607.1,GhM_D10G2518.1,GhM_D08G2500.1,GhM_A03G0477.1,GhM_D03G1652.1,GhM_A08G0022.1,GhM_D08G0016.1,GhM_A05G1138.1,GhM_D05G1152.1,GhM_A01G2113.1,GhM_A01G0044.1,GhM_D01G0026.1,GhM_A03G2651.1,GhM_D02G2670.1,GhM_A10G1132.1,GhM_D10G0962.1,GhM_D11G1996.1,GhM_A11G2008.1,GhM_D01G2082.1 | 27 | 1 | Gossypium | Cotton | |||
| TA1769:GhM_D03G1516.1,GhM_D03G1518.1 | AT2G39700||AT2G28950||AT2G40610 | ATEXPA6, ATEXP6, ATHEXP ALPHA 1.8; ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)||ATEXPA8, EXP8, ATEXP8, ATHEXP ALPHA 1.11; ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)||ATEXPA4, ATEXP4, ATHEXP ALPHA 1.6; ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) | GO:0009826|unidimensional cell growth;GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0009828|plant-type cell wall loosening;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0005576|extracellular region;GO:0006949|syncytium formation | GhM_A01G2749.1,GhM_A03G0604.1,GhM_A04G1082.1,GhM_A05G1046.1,GhM_A07G1193.1,GhM_A09G1933.1,GhM_A10G1865.1,GhM_A10G2269.1,GhM_A10G2802.1,GhM_A11G4101.1,GhM_A13G0234.1,GhM_D01G2676.1,GhM_D05G1057.1,GhM_D07G1179.1,GhM_D10G2765.1,GhM_D13G0218.1,GhM_D04G1543.1,GhM_D09G1832.1,GhM_D11G3996.1,GhM_D04G0155.1,GhM_A05G4800.1,GhM_D10G2191.1,GhM_A05G3136.1,GhM_D10G1275.1,GhM_D13G2908.1 | 27 | 1 | Gossypium | Cotton | |||
| TA1475:GhM_A13G0759.1,GhM_A13G0764.1;TA3068:GhM_A04G0603.1,GhM_A04G0609.1 | AT2G17290||AT3G10660||AT2G38910||AT5G04870||AT4G09570||AT5G23580||AT1G35670||AT4G35310 | CPK4, ATCPK4; CPK4; calmodulin-dependent protein kinase/ kinase/ protein kinase||CPK5, ATCPK5; CPK5 (calmodulin-domain protein kinase 5); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CDPK9, ATCDPK9, CPK12, ATCPK12; CDPK9 (CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK6, ATCDPK3; CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||ATCDPK2, CPK11, ATCPK11; ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2); calmodulin-dependent protein kinase/ kinase||CPK1, ATCPK1; CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1); calmodulin-dependent protein kinase/ kinase||CPK2, ATCPK2; CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase||CPK20; CPK20; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0005789|endoplasmic reticulum membrane;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0010119|regulation of stomatal movement;GO:0016301|kinase activity;GO:0016020|membrane;GO:0004672|protein kinase activity;GO:0004683|calmodulin-dependent protein kinase activity;GO:0005829|cytosol;GO:0009738|abscisic acid mediated signaling pathway;GO:0005515|protein binding;GO:0005777|peroxisome;GO:0005509|calcium ion binding;GO:0010359|regulation of anion channel activity;GO:0005524|ATP binding | GhM_A03G2258.1,GhM_A12G0139.1,GhM_D13G0620.1,GhM_D02G2285.1,GhM_D12G0147.1,GhM_A01G1561.1,GhM_A02G0691.1,GhM_D04G1144.1,GhM_D01G1520.1,GhM_A09G1673.1,GhM_D09G1575.1,GhM_D10G2413.1,GhM_A10G2495.1,GhM_A13G0041.1,GhM_D04G1151.1,GhM_D04G0470.1,GhM_A05G4478.1,GhM_A05G3098.1,GhM_D05G3098.1,GhM_D04G1937.1,GhM_D02G0689.1,GhM_A04G1448.1,GhM_D13G0043.1 | 27 | 2 | Gossypium | Cotton | |||
| TA853:GhM_D10G0543.1,GhM_D10G0544.1,GhM_D10G0545.1;TA2357:GhM_D08G3002.1,GhM_D08G3003.1 | AT1G09200||AT4G40030 | histone H3.2||histone H3 | GO:0009507|chloroplast;GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0000786|nucleosome | GhM_A02G1127.1,GhM_A02G1705.1,GhM_A05G0181.1,GhM_A05G2508.1,GhM_A06G1838.1,GhM_A07G0449.1,GhM_A08G0402.1,GhM_A10G0569.1,GhM_A10G0989.1,GhM_A11G2065.1,GhM_A13G1813.1,GhM_A13G2790.1,GhM_D02G1089.1,GhM_D03G0424.1,GhM_D05G0190.1,GhM_D05G2519.1,GhM_D06G1849.1,GhM_D08G0388.1,GhM_D10G1093.1,GhM_D13G1691.1,GhM_D13G2679.1,GhM_Scaf105G256.1 | 27 | 2 | Gossypium | Cotton | |||
| TA8:GhM_A01G0441.1,GhM_A01G0443.1,GhM_A01G0444.1,GhM_A01G0445.1,GhM_A01G0447.1,GhM_A01G0448.1,GhM_A01G0449.1,GhM_A01G0450.1,GhM_A01G0451.1,GhM_A01G0452.1,GhM_A01G0454.1,GhM_A01G0455.1,GhM_A01G0456.1,GhM_A01G0458.1,GhM_A01G0459.1,GhM_A01G0460.1,GhM_A01G0461.1;TA75:GhM_D01G0439.1,GhM_D01G0441.1,GhM_D01G0443.1,GhM_D01G0444.1,GhM_D01G0445.1,GhM_D01G0447.1,GhM_D01G0448.1,GhM_D01G0449.1 | AT1G12210||AT1G63350||AT4G10780||AT1G12220||AT4G27190||AT5G05400||AT1G56510||AT1G01490||AT5G63020||AT1G60360 | RFL1; RFL1 (RPS5-like 1); ATP binding / protein binding||zinc finger (C3HC4-type RING finger) family protein||disease resistance protein (NBS-LRR class), putative||disease resistance protein (CC-NBS-LRR class), putative||heavy-metal-associated domain-containing protein||WRR4; WRR4 (WHITE RUST RESISTANCE 4); ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor||RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | GO:0031224|intrinsic to membrane;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0009617|response to bacterium;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0030001|metal ion transport;GO:0006915|apoptosis;GO:0009817|defense response to fungus, incompatible interaction;GO:0008270|zinc ion binding;GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0005622|intracellular;GO:0046872|metal ion binding;GO:0005524|ATP binding | GhM_A01G0462.1,GhM_D03G1403.1 | 27 | 2 | Gossypium | Cotton | |||
| TA667:GhM_D02G0234.1,GhM_D02G0235.1,GhM_D02G0236.1;TA952:GhM_A02G0238.1,GhM_A02G0239.1,GhM_A02G0240.1;TA2383:GhM_D09G0779.1,GhM_D09G0781.1 | AT2G32830||AT2G38940||AT5G43360||AT3G54700 | carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter||PHT3, ATPT4; PHT3 (PHOSPHATE TRANSPORTER 3); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter||ATPT2, PHT1;4; ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter||PHT5; PHT5; inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter | GO:0005351|sugar:hydrogen symporter activity;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005634|nucleus;GO:0005315|inorganic phosphate transmembrane transporter activity;GO:0006817|phosphate transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0015114|phosphate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A10G1547.1,GhM_D10G1551.1,GhM_A09G0838.1,GhM_A07G2734.1,GhM_D07G2634.1,GhM_A02G0438.1,GhM_A02G0439.1,GhM_A02G0440.1,GhM_A07G2279.1,GhM_A11G1536.1,GhM_D07G1136.1,GhM_D07G2214.1,GhM_D08G0988.1,GhM_D09G0639.1,GhM_D11G1527.1,GhM_D12G1167.1,GhM_D10G0757.1,GhM_D12G0573.1,GhM_D13G1085.1 | 27 | 3 | Gossypium | Cotton | |||
| TA807:GhM_D07G1199.1,GhM_D07G1211.1,GhM_D07G1213.1;TA1075:GhM_A07G1216.1,GhM_A07G1227.1,GhM_A07G1229.1;TA3141:GhM_A05G1007.1,GhM_A05G1008.1 | AT1G07400||AT2G29500||AT1G53540||AT5G59720 | 17.8 kDa class I heat shock protein (HSP17.8-CI)||HSP18.2; HSP18.2 (heat shock protein 18.2)||17.6 kDa class I small heat shock protein (HSP17.6B-CI)||17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) | GO:0009644|response to high light intensity;GO:0006979|response to oxidative stress;GO:0042542|response to hydrogen peroxide;GO:0003674|molecular_function;GO:0009408|response to heat;GO:0005575|cellular_component;GO:0010286|heat acclimation | GhM_A02G0645.1,GhM_A03G0516.1,GhM_D05G1022.1,GhM_D02G0642.1,GhM_D08G0063.1,GhM_A08G0078.1,GhM_A12G1757.1,GhM_D12G1707.1,GhM_D08G2064.1,GhM_A08G2111.1,GhM_D07G0824.1,GhM_D03G1613.1,GhM_A07G0825.1,GhM_D05G1069.1,GhM_A05G1056.1,GhM_A07G1228.1,GhM_D07G1164.1,GhM_D07G1212.1,GhM_D07G1122.1 | 27 | 3 | Gossypium | Cotton | |||
| TA256:GhM_D09G0626.1,GhM_D09G0627.1,GhM_D09G0628.1,GhM_D09G0629.1,GhM_D09G0630.1;TA400:GhM_A01G0686.1,GhM_A01G0687.1,GhM_A01G0688.1,GhM_A01G0690.1;TA353:GhM_D01G0653.1,GhM_D01G0654.1,GhM_D01G0655.1,GhM_D01G0656.1;TA619:GhM_A13G0265.1,GhM_A13G0267.1,GhM_A13G0268.1;TA3511:GhM_A09G0208.1,GhM_A09G0210.1;TA3526:GhM_A09G0686.1,GhM_A09G0688.1 | AT3G26300||AT1G13080||AT3G26310||AT5G07990||AT4G36220||AT1G13110||AT5G24950||AT3G48280||AT3G48320||AT2G45570 | FAH1, CYP84A1; FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase||TT7, CYP75B1, D501; TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding||CYP71A25; CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C2; CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B2; CYP71B2 (CYTOCHROME P450 71B2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B35; CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B7; CYP71B7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A15; CYP71A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A21; CYP71A21; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0010224|response to UV-B;GO:0008150|biological_process;GO:0046424|ferulate 5-hydroxylase activity;GO:0020037|heme binding;GO:0010286|heat acclimation;GO:0009411|response to UV;GO:0016711|flavonoid 3'-monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0005506|iron ion binding;GO:0009809|lignin biosynthetic process;GO:0009813|flavonoid biosynthetic process;GO:0009699|phenylpropanoid biosynthetic process;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D13G0253.1,GhM_A09G0209.1,GhM_A05G3328.1,GhM_A09G0660.1,GhM_D05G3307.1,GhM_A09G0939.1,GhM_A09G0687.1 | 27 | 6 | Gossypium | Cotton | |||
| - | ATCG00800||ATCG00780 | RPL14; encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex||encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex | GO:0016020|membrane;GO:0009295|nucleoid;GO:0009507|chloroplast | GhM_A01G0558.1,GhM_D11G0750.1,GhM_A02G1361.1,GhM_A09G1336.1,GhM_A08G0891.1,GhM_A13G1125.1,GhM_A10G1497.1,GhM_A12G0264.1,GhM_D02G1380.1,GhM_A12G0952.1,GhM_A11G1407.1,GhM_A11G1823.1,GhM_D08G1678.1,GhM_A05G3748.1,GhM_A13G1789.1,GhM_D04G0594.1,GhM_D05G3348.1,GhM_A12G0266.1,GhM_A01G1258.1,GhM_D02G1378.1,GhM_A12G0954.1,GhM_A13G1123.1,GhM_D06G1563.1,GhM_D03G1281.1,GhM_D08G0083.1,GhM_D09G0582.1 | 26 | 0 | Gossypium | Cotton | |||
| - | AT1G67750||AT5G63180||AT3G07010||AT5G48900 | pectate lyase family protein | GO:0012505|endomembrane system;GO:0016829|lyase activity;GO:0008150|biological_process;GO:0030570|pectate lyase activity | GhM_A01G1947.1,GhM_D01G1976.1,GhM_A03G0863.1,GhM_D03G1246.1,GhM_A03G1775.1,GhM_D02G1855.1,GhM_A05G3708.1,GhM_D05G3656.1,GhM_A07G0668.1,GhM_D07G0659.1,GhM_A07G1926.1,GhM_D07G1875.1,GhM_A09G2459.1,GhM_A07G2885.1,GhM_D07G2790.1,GhM_A09G0419.1,GhM_D09G0389.1,GhM_A10G1479.1,GhM_D10G1642.1,GhM_A11G1593.1,GhM_D11G1588.1,GhM_A12G1913.1,GhM_D12G1840.1,GhM_A12G2379.1,GhM_D12G2274.1,GhM_D09G2347.1 | 26 | 0 | Gossypium | Cotton | |||
| - | AT4G35230||AT5G59010||AT3G54030||AT1G63500||AT4G00710||AT5G46570 | protein kinase-related||BSK3; BSK3 (BR-SIGNALING KINASE 3); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase||BSK2; BSK2 (BR-SIGNALING KINASE 2); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase||BSK1; BSK1 (BR-SIGNALING KINASE 1); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase||ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005488|binding;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0005773|vacuole;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2167.1,GhM_D01G2134.1,GhM_A02G1080.1,GhM_D02G1113.1,GhM_A05G2023.1,GhM_D05G2034.1,GhM_A12G0368.1,GhM_D12G0427.1,GhM_D03G1465.1,GhM_A01G2766.1,GhM_D01G2693.1,GhM_A03G0647.1,GhM_D05G1020.1,GhM_A05G1005.1,GhM_A09G2006.1,GhM_A07G1230.1,GhM_D09G1906.1,GhM_A09G2335.1,GhM_D09G2235.1,GhM_A12G1447.1,GhM_D12G1385.1,GhM_A12G2839.1,GhM_D12G2726.1,GhM_D07G1215.1,GhM_D07G1214.1,GhM_A10G3043.1 | 26 | 0 | Gossypium | Cotton | |||
| - | AT2G03090||AT3G29030||AT1G69530||AT1G20190||AT2G40610||AT1G26770 | ATEXPA5, ATEXP5, ATHEXP ALPHA 1.4, EXP5, EXPA5; EXPA5 (EXPANSIN A5)||ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3; ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)||ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2; ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)||ATEXPA10, AT-EXP10, ATEXP10, ATHEXP ALPHA 1.1, EXP10; ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall||ATEXPA8, EXP8, ATEXP8, ATHEXP ALPHA 1.11; ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)||ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14; ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) | GO:0012505|endomembrane system;GO:0009826|unidimensional cell growth;GO:0009505|plant-type cell wall;GO:0009739|response to gibberellin stimulus;GO:0010114|response to red light;GO:0009828|plant-type cell wall loosening;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0005576|extracellular region;GO:0006949|syncytium formation;GO:0005618|cell wall;GO:0005199|structural constituent of cell wall | GhM_A03G1370.1,GhM_D02G1494.1,GhM_A05G3523.1,GhM_D05G3471.1,GhM_A07G2656.1,GhM_D07G2553.1,GhM_A09G0170.1,GhM_D09G0167.1,GhM_A10G1931.1,GhM_D13G0857.1,GhM_A11G3002.1,GhM_D11G2931.1,GhM_A12G2273.1,GhM_A05G2056.1,GhM_D05G2072.1,GhM_A05G2866.1,GhM_D05G2868.1,GhM_A06G0021.1,GhM_D06G0015.1,GhM_D05G3133.1,GhM_A13G0077.1,GhM_D13G0083.1,GhM_A13G0909.1,GhM_D12G2171.1,GhM_A13G3000.1,GhM_D10G1213.1 | 26 | 0 | Gossypium | Cotton | |||
| - | AT2G48060 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A07G0727.1,GhM_D07G1186.1,GhM_A08G2411.1,GhM_A08G1986.1,GhM_D08G2355.1,GhM_A11G1408.1,GhM_D11G1396.1,GhM_D13G1352.1,GhM_A13G1462.1,GhM_D13G1353.1,GhM_A13G1463.1,GhM_A11G1409.1,GhM_D11G1397.1,GhM_A11G1410.1,GhM_D08G2356.1,GhM_D08G1456.1,GhM_A12G1051.1,GhM_D02G1071.1,GhM_D01G0418.1,GhM_D11G0596.1,GhM_D04G2126.1,GhM_D05G1941.1,GhM_D05G2135.1,GhM_D11G3046.1,GhM_D06G1662.1,GhM_D10G0437.1 | 26 | 0 | Gossypium | Cotton | |||
| TA2149:GhM_A01G1355.1,GhM_A01G1356.1 | AT2G22740 | SUVH6; SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0008168|methyltransferase activity;GO:0010429|methyl-CpNpN binding;GO:0016571|histone methylation;GO:0008327|methyl-CpG binding | GhM_A12G0964.1,GhM_A08G1681.1,GhM_A08G1150.1,GhM_A12G0940.1,GhM_A12G1204.1,GhM_A06G1481.1,GhM_A02G1435.1,GhM_A02G1463.1,GhM_A08G0983.1,GhM_A10G1352.1,GhM_A13G0951.1,GhM_A05G3845.1,GhM_A04G0732.1,GhM_A12G1094.1,GhM_A08G1463.1,GhM_A03G1342.1,GhM_A11G2714.1,GhM_A06G1733.1,GhM_A08G1308.1,GhM_A07G2118.1,GhM_A03G1438.1,GhM_A06G0945.1,GhM_A03G1041.1,GhM_A02G1324.1 | 26 | 1 | Gossypium | Cotton | |||
| TA2292:GhM_D08G0173.1,GhM_D08G0174.1 | AT3G13670||AT2G25760||AT3G03940||AT5G18190 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0504.1,GhM_A05G1463.1,GhM_A07G0287.1,GhM_A08G0185.1,GhM_A08G0285.1,GhM_A10G0738.1,GhM_A11G3255.1,GhM_A11G3751.1,GhM_A13G1461.1,GhM_A13G2305.1,GhM_A13G2477.1,GhM_D05G1477.1,GhM_D05G2238.1,GhM_D07G0289.1,GhM_D13G2193.1,GhM_D10G0716.1,GhM_D13G2372.1,GhM_D11G3175.1,GhM_D13G1351.1,GhM_D11G3673.1,GhM_D08G3026.1,GhM_A05G0244.1,GhM_A08G3096.1,GhM_D05G0251.1 | 26 | 1 | Gossypium | Cotton | |||
| TA2796:GhM_D13G0934.1,GhM_D13G0938.1 | - | - | - | GhM_D01G1649.1,GhM_D04G1000.1,GhM_D05G2883.1,GhM_D05G3900.1,GhM_D06G1436.1,GhM_D06G1819.1,GhM_D07G1275.1,GhM_D08G1120.1,GhM_D08G2739.1,GhM_D09G0127.1,GhM_D09G0544.1,GhM_A01G1596.1,GhM_A02G1713.1,GhM_A09G0481.1,GhM_A10G2297.1,GhM_D01G1618.1,GhM_D02G1807.1,GhM_D02G2111.1,GhM_D07G2489.1,GhM_D08G1155.1,GhM_D09G0126.1,GhM_D10G0948.1,GhM_D12G1405.1,GhM_D13G1156.1 | 26 | 1 | Gossypium | Cotton | |||
| TA2904:GhM_A02G0937.1,GhM_A02G0941.1 | - | - | - | GhM_A01G1644.1,GhM_A01G1712.1,GhM_A03G0628.1,GhM_A11G3701.1,GhM_A05G4737.1,GhM_D06G1137.1,GhM_D07G2485.1,GhM_D11G2867.1,GhM_A10G2744.1,GhM_A05G4196.1,GhM_A03G1637.1,GhM_D04G1490.1,GhM_D10G1143.1,GhM_A11G3073.1,GhM_A07G0860.1,GhM_A10G2280.1,GhM_D09G0569.1,GhM_A10G0998.1,GhM_A07G1527.1,GhM_D10G1086.1,GhM_D08G1972.1,GhM_D05G3334.1,GhM_D09G0784.1,GhM_A07G2157.1 | 26 | 1 | Gossypium | Cotton | |||
| - | AT2G41970||AT2G43230||AT3G17410||AT3G62220||AT2G30740 | serine/threonine protein kinase, putative||protein kinase, putative | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A01G1580.1,GhM_D01G1550.1,GhM_A02G0159.1,GhM_D02G0164.1,GhM_A05G3738.1,GhM_A02G0665.1,GhM_D02G0656.1,GhM_A07G1599.1,GhM_D07G1563.1,GhM_A08G0473.1,GhM_D08G0457.1,GhM_A09G2542.1,GhM_A04G0687.1,GhM_D04G1050.1,GhM_A10G1671.1,GhM_D10G1448.1,GhM_D05G3790.1,GhM_D01G0337.1,GhM_D05G0464.1,GhM_D06G1537.1,GhM_D01G1336.1,GhM_D06G1023.1,GhM_D09G2423.1,GhM_A12G1579.1,GhM_D12G1530.1 | 25 | 0 | Gossypium | Cotton | |||
| - | AT5G43380||AT4G11240||AT2G39840||AT5G59160||AT3G05580||AT5G27840 | TOPP2, PPO; TOPP2; protein serine/threonine phosphatase||TOPP4; TOPP4; protein serine/threonine phosphatase||TOPP7; TOPP7; protein serine/threonine phosphatase||serine/threonine protein phosphatase, putative||TOPP8; TOPP8; protein serine/threonine phosphatase||TOPP6; TOPP6; protein serine/threonine phosphatase | GO:0008150|biological_process;GO:0006470|protein amino acid dephosphorylation;GO:0000164|protein phosphatase type 1 complex;GO:0004722|protein serine/threonine phosphatase activity;GO:0005575|cellular_component | GhM_A02G0437.1,GhM_D02G0434.1,GhM_A02G1018.1,GhM_A10G2843.1,GhM_A02G1307.1,GhM_D03G0936.1,GhM_A03G0635.1,GhM_A07G1212.1,GhM_A05G1015.1,GhM_D05G1029.1,GhM_A08G2683.1,GhM_D08G2626.1,GhM_A09G2771.1,GhM_D09G2644.1,GhM_A13G2254.1,GhM_D13G2142.1,GhM_D03G1481.1,GhM_D07G1196.1,GhM_D10G2810.1,GhM_D05G3784.1,GhM_D11G1963.1,GhM_D06G0452.1,GhM_D11G3283.1,GhM_Scaf013G123.1,GhM_D11G3648.1 | 25 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1664.1,GhM_A09G1240.1,GhM_A06G1165.1,GhM_A08G1174.1,GhM_A07G2180.1,GhM_D12G1485.1,GhM_D01G1597.1,GhM_A11G2668.1,GhM_A03G1109.1,GhM_D04G1004.1,GhM_A07G2242.1,GhM_A10G1443.1,GhM_A13G1403.1,GhM_D03G0689.1,GhM_D01G2090.1,GhM_D11G3472.1,GhM_D05G4203.1,GhM_D07G2138.1,GhM_A12G0978.1,GhM_A10G1383.1,GhM_D02G1294.1,GhM_A10G2210.1,GhM_D08G1080.1,GhM_Scaf083G237.1,GhM_A13G1045.1 | 25 | 0 | Gossypium | Cotton | |||
| - | AT1G74070||AT4G00570||AT5G24280||AT2G13560 | malate oxidoreductase, putative||EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: DMS3 (DEFECTIVE IN MERISTEM SILENCING 3) (TAIR:AT3G49250.1); Has 61 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).||peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor;GO:0004470|malic enzyme activity;;GO:0009507|chloroplast;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0008152|metabolic process;GO:0006108|malate metabolic process;GO:0055114|oxidation reduction;GO:0005739|mitochondrion;GO:0006457|protein folding;GO:0009651|response to salt stress;GO:0009543|chloroplast thylakoid lumen;GO:0050897|cobalt ion binding;GO:0008270|zinc ion binding;GO:0005524|ATP binding | GhM_A03G0773.1,GhM_D03G1326.1,GhM_D01G2064.1,GhM_D10G1300.1,GhM_D04G0773.1,GhM_D08G1375.1,GhM_D05G3571.1,GhM_A07G1757.1,GhM_D07G1725.1,GhM_A11G1003.1,GhM_D11G1018.1,GhM_D06G1618.1,GhM_D08G1367.1,GhM_D04G1355.1,GhM_Scaf075G223.1,GhM_D07G2274.1,GhM_D11G3023.1,GhM_D10G1899.1,GhM_D11G2993.1,GhM_D13G2031.1,GhM_A05G3962.1,GhM_D04G0852.1,GhM_D06G0011.1,GhM_D04G1183.1,GhM_D11G2387.1 | 25 | 0 | Gossypium | Cotton | |||
| - | AT3G03790||AT1G32200||AT2G39200||AT5G49030 | ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein||MLO12, ATMLO12; MLO12 (MILDEW RESISTANCE LOCUS O 12); calmodulin binding||OVA2; OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/ catalytic/ isoleucine-tRNA ligase/ nucleotide binding||ATS1, ACT1; ATS1; glycerol-3-phosphate O-acyltransferase | GO:0003824|catalytic activity;GO:0006418|tRNA aminoacylation for protein translation;GO:0008219|cell death;GO:0005886|plasma membrane;GO:0004812|aminoacyl-tRNA ligase activity;GO:0006655|phosphatidylglycerol biosynthetic process;GO:0008150|biological_process;GO:0009570|chloroplast stroma;GO:0006952|defense response;GO:0005516|calmodulin binding;GO:0004822|isoleucine-tRNA ligase activity;GO:0009817|defense response to fungus, incompatible interaction;GO:0048481|ovule development;GO:0009507|chloroplast;GO:0010150|leaf senescence;GO:0005488|binding;GO:0009536|plastid;GO:0000166|nucleotide binding;GO:0004366|glycerol-3-phosphate O-acyltransferase activity;GO:0005524|ATP binding | GhM_A04G0789.1,GhM_A11G2305.1,GhM_A04G1570.1,GhM_D10G0311.1,GhM_D02G1518.1,GhM_D05G3695.1,GhM_A04G0790.1,GhM_A11G2306.1,GhM_A04G1569.1,GhM_D10G0312.1,GhM_A13G2381.1,GhM_A11G2887.1,GhM_D11G2839.1,GhM_A13G2188.1,GhM_D13G2074.1,GhM_D03G0498.1,GhM_D13G1267.1,GhM_D10G2082.1,GhM_D10G2372.1,GhM_D08G0874.1,GhM_D13G2154.1,GhM_D13G2073.1,GhM_D13G2072.1,GhM_D11G1177.1,GhM_D09G0585.1 | 25 | 0 | Gossypium | Cotton | |||
| - | AT5G07780||AT5G07760||AT5G07740||AT2G25050||AT5G58160 | pseudogene, formin homology 2 (FH2) domain-containing protein, contains formin homology 2 domain, Pfam:PF02128; blastp match of 59% identity and 3.3e-175 P-value to GP|27817931|dbj|BAC55695.1||actin binding||AP004275 P0453E05.6 {Oryza sativa (japonica cultivar-group)}||formin homology 2 domain-containing protein / FH2 domain-containing protein | ;GO:0009507|chloroplast;GO:0030036|actin cytoskeleton organization;GO:0003779|actin binding;GO:0016043|cellular component organization | GhM_A04G1164.1,GhM_A07G2129.1,GhM_A06G0575.1,GhM_A07G2648.1,GhM_A12G0818.1,GhM_A11G2873.1,GhM_D11G0393.1,GhM_A05G3874.1,GhM_A08G1272.1,GhM_A11G0409.1,GhM_A05G0650.1,GhM_D05G0670.1,GhM_A06G1169.1,GhM_D06G1200.1,GhM_A07G0840.1,GhM_D07G0839.1,GhM_A07G0838.1,GhM_D12G2186.1,GhM_A12G2295.1,GhM_A11G0410.1,GhM_A09G2956.1,GhM_D09G2816.1,GhM_A07G0839.1,GhM_D13G2343.1,GhM_A13G2445.1 | 25 | 0 | Gossypium | Cotton | |||
| TA53:GhM_D05G2782.1,GhM_D05G2783.1,GhM_D05G2784.1,GhM_D05G2785.1,GhM_D05G2786.1,GhM_D05G2787.1,GhM_D05G2788.1,GhM_D05G2790.1,GhM_D05G2791.1;TA500:GhM_A05G2777.1,GhM_A05G2778.1,GhM_A05G2779.1,GhM_A05G2780.1;TA96:GhM_A05G2794.1,GhM_A05G2795.1,GhM_A05G2796.1,GhM_A05G2798.1,GhM_A05G2799.1,GhM_A05G2800.1,GhM_A05G2801.1,GhM_A05G2802.1 | AT5G48100||AT5G09360||AT5G03260||AT2G30210||AT5G66920 | TT10, LAC15, ATLAC15; TT10 (TRANSPARENT TESTA 10); copper ion binding / laccase||LAC3; LAC3 (laccase 3); laccase||LAC14; LAC14 (laccase 14); laccase||sks17; sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase||LAC11; LAC11 (laccase 11); laccase | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0046688|response to copper ion;GO:0009505|plant-type cell wall;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0009809|lignin biosynthetic process;GO:0009813|flavonoid biosynthetic process;GO:0005618|cell wall;GO:0046274|lignin catabolic process;GO:0016491|oxidoreductase activity | GhM_A05G3062.1,GhM_D05G3058.1,GhM_A06G1445.1,GhM_D06G1398.1 | 25 | 3 | Gossypium | Cotton | |||
| TA705:GhM_D04G1451.1,GhM_D04G1453.1,GhM_D04G1454.1;TA3077:GhM_A04G1001.1,GhM_A04G1004.1;TA1207:GhM_A10G2625.1,GhM_A10G2626.1;TA2515:GhM_D10G2539.1,GhM_D10G2542.1 | AT1G07920 | elongation factor 1-alpha / EF-1-alpha | GO:0009507|chloroplast;GO:0003746|translation elongation factor activity;GO:0046686|response to cadmium ion;GO:0005516|calmodulin binding;GO:0005739|mitochondrion;GO:0005730|nucleolus;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G1195.1,GhM_A01G2672.1,GhM_A03G1480.1,GhM_D01G1172.1,GhM_D06G2192.1,GhM_D12G1027.1,GhM_A12G1024.1,GhM_A07G1410.1,GhM_D07G1391.1,GhM_A05G4089.1,GhM_A05G4102.1,GhM_A05G4103.1,GhM_A06G2203.1,GhM_D02G1595.1,GhM_D04G0980.1,GhM_D04G0987.1 | 25 | 4 | Gossypium | Cotton | |||
| TA933:GhM_D13G0874.1,GhM_D13G0876.1,GhM_D13G0879.1;TA1409:GhM_A12G2111.1,GhM_A12G2112.1;TA2734:GhM_D12G2013.1,GhM_D12G2015.1;TA1481:GhM_A13G0931.1,GhM_A13G0932.1;TA1806:GhM_D04G0546.1,GhM_D04G0570.1 | AT3G01140||AT5G15310||AT5G62470||AT3G47600||AT3G02940||AT4G21440 | MYB107, AtMYB107; MYB107 (myb domain protein 107); DNA binding / transcription factor||MYB106, AtMYB106; MYB106 (myb domain protein 106); DNA binding / transcription factor||MYB96, MYBCOV1, ATMYB96; MYB96 (myb domain protein 96); DNA binding / transcription factor||ATMYB102, ATM4; ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor||ATMYB16, ATMIXTA; ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor||MYB94, ATMYBCP70, ATMYB94; ATMYB94 (MYB DOMAIN PROTEIN 94); DNA binding / transcription factor | GO:0009739|response to gibberellin stimulus;GO:0046686|response to cadmium ion;GO:0009733|response to auxin stimulus;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0009723|response to ethylene stimulus;GO:0010468|regulation of gene expression;GO:0009753|response to jasmonic acid stimulus;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0010091|trichome branching;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0009751|response to salicylic acid stimulus;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0000902|cell morphogenesis | GhM_A05G3775.1,GhM_A05G4398.1,GhM_A10G1933.1,GhM_A05G4368.1,GhM_D03G0724.1,GhM_D10G1211.1,GhM_A11G3828.1,GhM_D11G3744.1,GhM_A05G1875.1,GhM_A08G0294.1,GhM_D05G1885.1,GhM_D03G0572.1,GhM_D08G0283.1,GhM_D12G2014.1 | 25 | 5 | Gossypium | Cotton | |||
| - | AT4G15930||AT2G42070||AT4G04940 | microtubule motor||ATNUDT23, ATNUDX23; ATNUDX23 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23); FAD diphosphatase/ hydrolase||transducin family protein / WD-40 repeat family protein | GO:0009507|chloroplast;GO:0016787|hydrolase activity;GO:0000166|nucleotide binding;GO:0003777|microtubule motor activity;GO:0006364|rRNA processing;GO:0007017|microtubule-based process;GO:0005875|microtubule associated complex;GO:0047884|FAD diphosphatase activity | GhM_A01G0350.1,GhM_A02G1072.1,GhM_A02G0564.1,GhM_D02G0551.1,GhM_A04G0153.1,GhM_A10G1556.1,GhM_D10G2015.1,GhM_A04G0596.1,GhM_A07G1211.1,GhM_A09G1723.1,GhM_A10G2078.1,GhM_A09G2576.1,GhM_D04G1110.1,GhM_A10G1715.1,GhM_A12G1174.1,GhM_A13G0905.1,GhM_A03G1990.1,GhM_A02G1071.1,GhM_A10G1713.1,GhM_A09G1620.1,GhM_D09G1517.1,GhM_A09G2896.1,GhM_D09G2758.1,GhM_A06G1024.1 | 24 | 0 | Gossypium | Cotton | |||
| - | AT4G26940||AT1G05170||AT2G32430||AT1G77810||AT1G33430||AT1G32930 | galactosyltransferase family protein | GO:0012505|endomembrane system;GO:0010584|pollen exine formation;GO:0016758|transferase activity, transferring hexosyl groups;GO:0006486|protein amino acid glycosylation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_A01G0867.1,GhM_D01G0830.1,GhM_A04G0141.1,GhM_D05G4262.1,GhM_A13G1257.1,GhM_A03G1452.1,GhM_D02G1571.1,GhM_A03G1451.1,GhM_D13G1030.1,GhM_D05G2604.1,GhM_A05G2590.1,GhM_D06G0492.1,GhM_A06G0474.1,GhM_D05G2603.1,GhM_A08G2982.1,GhM_D08G2919.1,GhM_A10G0136.1,GhM_A05G1920.1,GhM_D05G1934.1,GhM_D10G0126.1,GhM_A12G2981.1,GhM_A09G2275.1,GhM_D09G2180.1,GhM_D12G2868.1 | 24 | 0 | Gossypium | Cotton | |||
| - | AT5G12480||AT2G24765||AT2G41860||AT5G19450||AT3G57530||AT3G51850||AT1G18890 | ARF3, ARL1, ATARL1; ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding||CPK13; CPK13; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||ATCDPK1, CPK10; ATCDPK1 (CALCIUM-DEPENDENT PROTEIN KINASE 1); calmodulin-dependent protein kinase/ kinase/ protein kinase||CPK7; CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||CPK14; CPK14; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK32, ATCPK32, CDPK32; CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32); calcium-dependent protein kinase C/ calmodulin-dependent protein kinase/ kinase/ protein binding||CDPK19, CPK8; CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0046686|response to cadmium ion;GO:0006468|protein amino acid phosphorylation;GO:0004698|calcium-dependent protein kinase C activity;GO:0005886|plasma membrane;GO:0004674|protein serine/threonine kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0016301|kinase activity;GO:0016020|membrane;GO:0004672|protein kinase activity;GO:0004683|calmodulin-dependent protein kinase activity;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0009738|abscisic acid mediated signaling pathway;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004713|protein tyrosine kinase activity;GO:0005509|calcium ion binding;GO:0005634|nucleus;GO:0005524|ATP binding | GhM_A01G1521.1,GhM_A02G1357.1,GhM_A10G1961.1,GhM_A07G2076.1,GhM_A05G2648.1,GhM_A09G1225.1,GhM_A05G3829.1,GhM_A11G2448.1,GhM_A13G0825.1,GhM_D09G1370.1,GhM_A02G1428.1,GhM_D03G0857.1,GhM_A07G1498.1,GhM_A04G1188.1,GhM_D04G1663.1,GhM_A11G0375.1,GhM_A09G1570.1,GhM_A09G1467.1,GhM_D07G1467.1,GhM_D09G1469.1,GhM_D11G0359.1,GhM_A11G4130.1,GhM_D11G4021.1,GhM_A13G1689.1 | 24 | 0 | Gossypium | Cotton | |||
| - | AT1G14510||AT5G26210||AT5G20510||AT3G11200||AT5G05610 | AL2; AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding||AL7; AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding||AL4; AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding||AL5; AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding||AL1; AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding | GO:0005634|nucleus;GO:0035064|methylated histone residue binding;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G1160.1,GhM_D02G1195.1,GhM_A05G0428.1,GhM_D05G0448.1,GhM_A05G1804.1,GhM_D05G1819.1,GhM_A06G1028.1,GhM_D06G1025.1,GhM_A06G1365.1,GhM_D06G1530.1,GhM_A07G0239.1,GhM_D07G0240.1,GhM_A10G0582.1,GhM_D10G0556.1,GhM_A13G2539.1,GhM_D13G2452.1,GhM_D10G2926.1,GhM_A04G1187.1,GhM_D04G1662.1,GhM_A06G2137.1,GhM_D06G2116.1,GhM_A10G2975.1,GhM_A13G0186.1,GhM_D13G0175.1 | 24 | 0 | Gossypium | Cotton | |||
| - | AT5G14790||AT2G36580||AT5G26680||AT3G20630||AT3G01450 | endonuclease, putative||binding||pyruvate kinase, putative||UBP14, TTN6, ATUBP14; UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14); ubiquitin-specific protease | GO:0008150|biological_process;GO:0000287|magnesium ion binding;GO:0008409|5'-3' exonuclease activity;GO:0003824|catalytic activity;GO:0005488|binding;GO:0030955|potassium ion binding;GO:0009793|embryonic development ending in seed dormancy;GO:0016579|protein deubiquitination;GO:0003677|DNA binding;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006096|glycolysis;GO:0004743|pyruvate kinase activity | GhM_A05G4302.1,GhM_D04G0634.1,GhM_A09G0340.1,GhM_D09G0315.1,GhM_D05G3490.1,GhM_D01G1868.1,GhM_D08G1436.1,GhM_D05G3661.1,GhM_D05G3489.1,GhM_D11G1973.1,GhM_D05G4085.1,GhM_A09G1164.1,GhM_D05G3663.1,GhM_D03G0491.1,GhM_D11G1972.1,GhM_D05G4104.1,GhM_D10G2352.1,GhM_D05G4206.1,GhM_D06G1940.1,GhM_D06G1941.1,GhM_D07G1683.1,GhM_D04G1079.1,GhM_D07G1507.1,GhM_D10G0890.1 | 24 | 0 | Gossypium | Cotton | |||
| TA947:GhM_D13G2739.1,GhM_D13G2748.1,GhM_D13G2750.1 | AT3G44200||AT3G20860||AT3G63280||AT3G12200||AT3G04810||AT1G54510 | "ATNEK6, NEK6, IBO1; NEK6 (""NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6""); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ATNEK1; ATNEK1 (ARABIDOPSIS THALIANA NIMA-RELATED SERINE/THREONINE KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase"||ATNEK2; ATNEK2 (NIMA-RELATED KINASE 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||AtNek7; AtNek7 (NIMA-related kinase7); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||ATNEK4; ATNEK4 (NIMA-RELATED KINASE 4); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ATNEK5; ATNEK5 (NIMA-RELATED KINASE5); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0055028|cortical microtubule;GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0009913|epidermal cell differentiation;GO:0007017|microtubule-based process;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0864.1,GhM_A07G1357.1,GhM_A09G1300.1,GhM_A13G2858.1,GhM_D05G0884.1,GhM_D07G1335.1,GhM_D09G1230.1,GhM_A01G2444.1,GhM_A08G0192.1,GhM_A08G0817.1,GhM_A09G1582.1,GhM_A11G3195.1,GhM_A12G0033.1,GhM_A13G2287.1,GhM_D01G2380.1,GhM_D08G0182.1,GhM_D08G0778.1,GhM_D09G1482.1,GhM_D11G3113.1,GhM_D12G0032.1,GhM_D13G2171.1 | 24 | 1 | Gossypium | Cotton | |||
| TA61:GhM_A02G0188.1,GhM_A02G0190.1,GhM_A02G0191.1,GhM_A02G0192.1,GhM_A02G0194.1,GhM_A02G0195.1,GhM_A02G0196.1,GhM_A02G0199.1,GhM_A02G0200.1;TA223:GhM_D02G0196.1,GhM_D02G0197.1,GhM_D02G0198.1,GhM_D02G0199.1,GhM_D02G0200.1;TA325:GhM_A11G0112.1,GhM_A11G0115.1,GhM_A11G0116.1,GhM_A11G0117.1 | AT5G44400||AT1G30700||AT4G20820||AT5G44360||AT5G44440||AT5G44380||AT1G26400 | FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003824|catalytic activity;GO:0016491|oxidoreductase activity;GO:0005618|cell wall;GO:0050660|FAD binding;GO:0009055|electron carrier activity | GhM_A09G2518.1,GhM_D09G2400.1,GhM_A03G1758.1,GhM_A10G0811.1,GhM_A11G0114.1,GhM_D11G0115.1 | 24 | 3 | Gossypium | Cotton | |||
| TA137:GhM_A12G1401.1,GhM_A12G1406.1,GhM_A12G1407.1,GhM_A12G1413.1,GhM_A12G1414.1,GhM_A12G1417.1;TA452:GhM_D12G1343.1,GhM_D12G1344.1,GhM_D12G1345.1,GhM_D12G1346.1;TA292:GhM_A05G3464.1,GhM_A05G3467.1,GhM_A05G3468.1,GhM_A05G3469.1,GhM_A05G3476.1;TA2714:GhM_D12G1386.1,GhM_D12G1388.1 | AT3G61310 | DNA-binding family protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A08G1777.1,GhM_A11G1021.1,GhM_A12G1448.1,GhM_A12G1449.1,GhM_D08G1731.1,GhM_D11G1033.1,GhM_A11G1018.1 | 24 | 4 | Gossypium | Cotton | |||
| TA800:GhM_D07G0232.1,GhM_D07G0233.1,GhM_D07G0234.1;TA3352:GhM_A07G0230.1,GhM_A07G0231.1;TA2322:GhM_D08G1647.1,GhM_D08G1649.1;TA3464:GhM_A08G1700.1,GhM_A08G1702.1 | AT4G38620||AT2G16720||AT3G13540||AT1G22640||AT4G09460 | ATMYB3, MYB3; MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor||ATMYB6; ATMYB6; DNA binding / transcription factor||ATMYB5; ATMYB5 (MYB DOMAIN PROTEIN 5); DNA binding / transcription factor||ATMYB4, MYB4; MYB4; DNA binding / transcription factor||MYB7, ATMYB7, ATY49; MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor | GO:0009739|response to gibberellin stimulus;GO:0048354|mucilage biosynthetic process during seed coat development;GO:0010090|trichome morphogenesis;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0009800|cinnamic acid biosynthetic process;GO:0010026|trichome differentiation;GO:0010468|regulation of gene expression;GO:0009753|response to jasmonic acid stimulus;GO:0009737|response to abscisic acid stimulus;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0010214|seed coat development;GO:0009892|negative regulation of metabolic process;GO:0009751|response to salicylic acid stimulus;GO:0010224|response to UV-B;GO:0009845|seed germination;GO:0009611|response to wounding;GO:0016481|negative regulation of transcription | GhM_A01G2089.1,GhM_A05G2805.1,GhM_A11G2896.1,GhM_A11G3846.1,GhM_A12G1495.1,GhM_A13G1344.1,GhM_A13G1643.1,GhM_D01G2057.1,GhM_D05G2806.1,GhM_D12G1434.1,GhM_D11G3763.1,GhM_D11G2851.1,GhM_D13G1247.1,GhM_D13G1524.1,GhM_D05G3081.1 | 24 | 4 | Gossypium | Cotton | |||
| - | ATCG00710||ATCG00720 | PSBH; Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII.||PETB; Encodes the cytochrome b(6) subunit of the cytochrome b6f complex. | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0042301|phosphate binding;GO:0016020|membrane | GhM_A01G1466.1,GhM_A12G0001.1,GhM_A02G1240.1,GhM_D02G2833.1,GhM_A03G1239.1,GhM_Scaf003G066.1,GhM_A05G3249.1,GhM_Scaf005G084.1,GhM_A05G3445.1,GhM_Scaf219G344.1,GhM_A05G3746.1,GhM_A09G0643.1,GhM_A12G2280.1,GhM_A09G1340.1,GhM_A12G2843.1,GhM_A13G1502.1,GhM_A13G1119.1,GhM_D02G1375.1,GhM_Scaf219G345.1,GhM_D02G1079.1,GhM_D04G1907.1,GhM_D02G1753.1,GhM_D09G1296.1 | 23 | 0 | Gossypium | Cotton | |||
| - | AT3G23820||AT4G30440||AT4G00110||AT1G02000||AT4G12250 | GAE5; GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic||GAE6; GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic||GAE2; GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); UDP-glucuronate 4-epimerase/ catalytic||GAE3; GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic||GAE1; GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1); UDP-glucuronate 4-epimerase/ catalytic | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0044237|cellular metabolic process;GO:0016020|membrane;GO:0050378|UDP-glucuronate 4-epimerase activity;GO:0005575|cellular_component;GO:0009225|nucleotide-sugar metabolic process | GhM_A02G0223.1,GhM_D02G0220.1,GhM_A05G4129.1,GhM_D04G1020.1,GhM_A07G1798.1,GhM_D07G1760.1,GhM_A08G0405.1,GhM_D08G0390.1,GhM_A08G1116.1,GhM_A08G3042.1,GhM_D08G2973.1,GhM_A10G1568.1,GhM_A08G1828.1,GhM_D08G1778.1,GhM_A11G0928.1,GhM_A08G2267.1,GhM_D08G2220.1,GhM_A11G2534.1,GhM_D11G0943.1,GhM_D08G1091.1,GhM_D11G2359.1,GhM_D10G1541.1,GhM_D08G1090.1 | 23 | 0 | Gossypium | Cotton | |||
| - | AT3G22750||AT3G01490||AT5G50000 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0366.1,GhM_D02G0388.1,GhM_A08G0820.1,GhM_D08G0782.1,GhM_A09G2681.1,GhM_D09G2559.1,GhM_A10G1410.1,GhM_A05G4296.1,GhM_D04G0638.1,GhM_A07G2821.1,GhM_D07G2731.1,GhM_A11G0781.1,GhM_D11G0796.1,GhM_A12G3341.1,GhM_D12G3226.1,GhM_D10G1709.1,GhM_A10G1411.1,GhM_A12G0036.1,GhM_D12G0036.1,GhM_D11G1456.1,GhM_D02G1060.1,GhM_D10G1870.1,GhM_D03G1867.1 | 23 | 0 | Gossypium | Cotton | |||
| - | AT1G08620||AT2G37560||AT3G11130 | clathrin heavy chain, putative||ORC2, ATORC2; ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2); DNA replication origin binding / protein binding||transcription factor | GO:0005515|protein binding;GO:0003688|DNA replication origin binding;GO:0016192|vesicle-mediated transport;GO:0000808|origin recognition complex;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0005488|binding;GO:0006260|DNA replication;GO:0006886|intracellular protein transport;GO:0003700|transcription factor activity;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A02G0533.1,GhM_D04G1579.1,GhM_D04G1057.1,GhM_A11G4092.1,GhM_D11G3987.1,GhM_D01G1542.1,GhM_D02G1457.1,GhM_D10G1485.1,GhM_D06G2064.1,GhM_D10G1891.1,GhM_D11G2522.1,GhM_D11G3110.1,GhM_D11G1800.1,GhM_D06G2063.1,GhM_A13G2247.1,GhM_D13G2136.1,GhM_A11G3105.1,GhM_D11G3035.1,GhM_D10G1890.1,GhM_D10G1694.1,GhM_D11G3111.1,GhM_D11G2521.1,GhM_D10G1535.1 | 23 | 0 | Gossypium | Cotton | |||
| - | AT3G16080||AT1G15250||AT5G25620||AT4G13260 | 60S ribosomal protein L37 (RPL37C)||60S ribosomal protein L37 (RPL37A)||YUC2; YUC2 (YUCCA2); FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ oxidoreductase||YUC6; YUC6 (YUCCA6); FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | GO:0009851|auxin biosynthetic process;GO:0022625|cytosolic large ribosomal subunit;GO:0050660|FAD binding;GO:0005840|ribosome;GO:0050661|NADP or NADPH binding;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis;GO:0004497|monooxygenase activity;GO:0004499|flavin-containing monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_A02G1582.1,GhM_A05G1432.1,GhM_A05G0533.1,GhM_D05G0557.1,GhM_A06G1144.1,GhM_D06G1170.1,GhM_A10G0906.1,GhM_D10G0750.1,GhM_D03G0800.1,GhM_D05G1447.1,GhM_D11G1811.1,GhM_A07G0314.1,GhM_A05G0534.1,GhM_D05G0558.1,GhM_A06G1143.1,GhM_D06G1169.1,GhM_A05G0250.1,GhM_D05G0259.1,GhM_A06G0738.1,GhM_D06G0737.1,GhM_D07G0313.1,GhM_D11G2401.1,GhM_D10G0704.1 | 23 | 0 | Gossypium | Cotton | |||
| - | AT1G79640||AT5G14720||AT4G24100||AT4G10730 | protein kinase family protein||ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G1603.1,GhM_D05G1618.1,GhM_A10G0541.1,GhM_D10G0515.1,GhM_D06G1050.1,GhM_D10G0941.1,GhM_A09G0350.1,GhM_D09G0327.1,GhM_A10G1157.1,GhM_A11G0777.1,GhM_D11G0792.1,GhM_D06G1202.1,GhM_A12G2961.1,GhM_A06G1225.1,GhM_D12G2847.1,GhM_A08G1412.1,GhM_D08G1404.1,GhM_A11G0213.1,GhM_D11G0208.1,GhM_A11G2730.1,GhM_A08G2301.1,GhM_A13G2019.1,GhM_D13G1914.1 | 23 | 0 | Gossypium | Cotton | |||
| TA1770:GhM_D03G1552.1,GhM_D03G1556.1 | AT3G12580||AT5G02490||AT1G16030 | heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)||HSP70; HSP70 (heat shock protein 70); ATP binding||Hsp70b; Hsp70b (heat shock protein 70B); ATP binding | GO:0009644|response to high light intensity;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0042542|response to hydrogen peroxide;GO:0009615|response to virus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009617|response to bacterium;GO:0009408|response to heat;GO:0006457|protein folding;GO:0005829|cytosol;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A01G2761.1,GhM_A03G0179.1,GhM_A03G0572.1,GhM_A05G1061.1,GhM_A06G2188.1,GhM_A09G1951.1,GhM_A10G2750.1,GhM_A11G4093.1,GhM_A12G1450.1,GhM_A13G2985.1,GhM_D01G2687.1,GhM_D11G3988.1,GhM_D05G1074.1,GhM_D06G2167.1,GhM_D09G1850.1,GhM_D10G2680.1,GhM_D13G2893.1,GhM_D03G1921.1,GhM_D12G1347.1,GhM_D12G1387.1,GhM_D09G0553.1 | 23 | 1 | Gossypium | Cotton | |||
| TA2559:GhM_D11G0617.1,GhM_D11G0629.1 | AT4G33950||AT1G78290||AT5G63650||AT5G66880||AT1G10940 | OST1, SNRK2-6, SRK2E, SNRK2.6, P44; OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase||ASK1, SNRK2-4, SNRK2.4, SRK2A; SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase||serine/threonine protein kinase, putative||SNRK2-5, SNRK2.5, SRK2H; SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5); kinase||SNRK2-3, SNRK2.3, SRK2I; SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase | GO:0005985|sucrose metabolic process;GO:0009739|response to gibberellin stimulus;GO:0040007|growth;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0004674|protein serine/threonine kinase activity;GO:0010119|regulation of stomatal movement;GO:0016301|kinase activity;GO:0004672|protein kinase activity;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0005737|cytoplasm;GO:0009931|calcium-dependent protein serine/threonine kinase activity;GO:0019432|triglyceride biosynthetic process;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0005634|nucleus;GO:0010029|regulation of seed germination;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0010118|stomatal movement;GO:0048366|leaf development;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A02G0911.1,GhM_A03G2501.1,GhM_A05G2517.1,GhM_A08G2143.1,GhM_A10G1940.1,GhM_A11G0558.1,GhM_A11G0620.1,GhM_A11G2404.1,GhM_A12G0300.1,GhM_A12G0807.1,GhM_A13G0398.1,GhM_D02G0908.1,GhM_D02G2524.1,GhM_D05G2529.1,GhM_D08G2099.1,GhM_D10G1204.1,GhM_D11G0550.1,GhM_D11G2480.1,GhM_D12G0302.1,GhM_D13G0381.1,GhM_D12G0788.1 | 23 | 1 | Gossypium | Cotton | |||
| TA3609:GhM_Scaf217G339.1,GhM_Scaf217G340.1 | ATCG00350||ATCG00340 | PSAB; Encodes the D1 subunit of photosystem I and II reaction centers.||PSAA; Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. | GO:0009579|thylakoid;GO:0016020|membrane;GO:0009507|chloroplast | GhM_A06G1538.1,GhM_A06G1539.1,GhM_A08G0862.1,GhM_A11G0078.1,GhM_A13G1665.1,GhM_D06G1289.1,GhM_D07G1354.1,GhM_D07G2746.1,GhM_D08G0814.1,GhM_Scaf261G374.1,GhM_Scaf285G385.1,GhM_A02G1455.1,GhM_A02G1619.1,GhM_A03G0011.1,GhM_A05G4065.1,GhM_A06G1509.1,GhM_A08G0223.1,GhM_A12G1630.1,GhM_D06G1703.1,GhM_D13G1543.1,GhM_Scaf003G060.1 | 23 | 1 | Gossypium | Cotton | |||
| TA1451:GhM_A13G0061.1,GhM_A13G0067.1;TA2766:GhM_D13G0066.1,GhM_D13G0071.1 | AT3G61790||AT3G58040||AT4G27880 | SINAT2; SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding||seven in absentia (SINA) family protein | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0007275|multicellular organismal development;GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0008270|zinc ion binding | GhM_A01G2378.1,GhM_A05G3169.1,GhM_A08G1283.1,GhM_A09G2240.1,GhM_A10G2304.1,GhM_A10G2317.1,GhM_A11G0167.1,GhM_A11G1127.1,GhM_A12G1487.1,GhM_A01G1581.1,GhM_D01G2322.1,GhM_D05G3172.1,GhM_D08G1198.1,GhM_D09G2147.1,GhM_D10G2231.1,GhM_D11G0165.1,GhM_D11G1137.1,GhM_D12G1424.1,GhM_D01G1548.1 | 23 | 2 | Gossypium | Cotton | |||
| TA24:GhM_D10G2729.1,GhM_D10G2732.1,GhM_D10G2734.1,GhM_D10G2735.1,GhM_D10G2747.1,GhM_D10G2748.1,GhM_D10G2749.1,GhM_D10G2750.1,GhM_D10G2756.1,GhM_D10G2757.1,GhM_D10G2758.1,GhM_D10G2759.1,GhM_D10G2760.1;TA200:GhM_A10G3026.1,GhM_A10G3027.1,GhM_A10G3028.1,GhM_A10G3029.1,GhM_A10G3030.1 | AT1G61180||AT4G27190||AT4G27220||AT1G61190 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0006499|N-terminal protein myristoylation;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A10G2796.1,GhM_A11G2835.1,GhM_D10G2970.1,GhM_D10G2730.1,GhM_A10G2797.1 | 23 | 2 | Gossypium | Cotton | |||
| TA1087:GhM_A08G0311.1,GhM_A08G0312.1,GhM_A08G0318.1;TA3115:GhM_A05G0067.1,GhM_A05G0068.1;TA1868:GhM_D05G0066.1,GhM_D05G0067.1;TA1684:GhM_D02G1116.1,GhM_D02G1120.1 | AT4G25810||AT5G57560||AT5G57550||AT3G23730 | XTR3; XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase||XTR6, XTH23; XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative||TCH4, XTH22; TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | GO:0012505|endomembrane system;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0009664|plant-type cell wall organization;GO:0009832|plant-type cell wall biogenesis;GO:0005975|carbohydrate metabolic process;GO:0009733|response to auxin stimulus;GO:0009741|response to brassinosteroid stimulus;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0010583|response to cyclopentenone;GO:0048046|apoplast;GO:0009408|response to heat;GO:0006073|cellular glucan metabolic process;GO:0009612|response to mechanical stimulus;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0005618|cell wall;GO:0009409|response to cold | GhM_A02G1083.1,GhM_A02G1829.1,GhM_A05G3671.1,GhM_A02G0202.1,GhM_A10G0344.1,GhM_A11G2661.1,GhM_D02G0203.1,GhM_D03G0559.1,GhM_D05G3628.1,GhM_D08G0301.1,GhM_D10G0331.1,GhM_D08G1043.1,GhM_A02G1828.1,GhM_D11G2643.1 | 23 | 4 | Gossypium | Cotton | |||
| TA236:GhM_D05G3890.1,GhM_D05G3891.1,GhM_D05G3892.1,GhM_D05G3894.1,GhM_D05G3895.1;TA3055:GhM_A04G0290.1,GhM_A04G0291.1;TA992:GhM_A04G0471.1,GhM_A04G0475.1,GhM_A04G0476.1;TA526:GhM_A09G0412.1,GhM_A09G0413.1,GhM_A09G0414.1,GhM_A09G0416.1;TA428:GhM_D09G0378.1,GhM_D09G0379.1,GhM_D09G0383.1,GhM_D09G0384.1 | AT3G25810||AT4G16740||AT4G16730||AT3G25820 | lyase/ magnesium ion binding||ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase||myrcene/ocimene synthase, putative||ATTPS03; ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase | GO:0005515|protein binding;GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0009536|plastid;GO:0009611|response to wounding;GO:0050552|(4S)-limonene synthase activity;GO:0010334|sesquiterpene synthase activity;GO:0034002|(R)-limonene synthase activity;GO:0016829|lyase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0043693|monoterpene biosynthetic process;GO:0050551|myrcene synthase activity;GO:0050550|pinene synthase activity | GhM_D05G4100.1,GhM_A10G2915.1,GhM_A09G0098.1,GhM_A10G2916.1,GhM_D09G0097.1 | 23 | 5 | Gossypium | Cotton | |||
| - | AT3G14720||AT2G01450||AT3G18040||AT2G42880||AT5G19010 | ATMPK20; ATMPK20; MAP kinase||MPK16; MPK16; MAP kinase||ATMPK17; ATMPK17; MAP kinase||MPK9; MPK9 (MAP KINASE 9); MAP kinase||ATMPK19, MPK19; ATMPK19; MAP kinase | GO:0004707|MAP kinase activity;GO:0005739|mitochondrion;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A01G0464.1,GhM_D01G0451.1,GhM_A01G1780.1,GhM_D01G1849.1,GhM_A01G1781.1,GhM_A03G1647.1,GhM_D02G1705.1,GhM_A05G4516.1,GhM_D04G0432.1,GhM_A09G0080.1,GhM_D09G0077.1,GhM_A11G0044.1,GhM_A02G0294.1,GhM_D02G0317.1,GhM_A12G3286.1,GhM_D12G3173.1,GhM_D11G0046.1,GhM_D05G3780.1,GhM_A11G3674.1,GhM_A04G0496.1,GhM_D05G3878.1,GhM_D11G3594.1 | 22 | 0 | Gossypium | Cotton | |||
| - | AT5G60570||AT2G02870||AT1G26930||AT4G02120||AT5G64370 | kelch repeat-containing F-box family protein||CTP synthase, putative / UTP--ammonia ligase, putative||BETA-UP; BETA-UP (beta-ureidopropionase); beta-ureidopropionase | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0006807|nitrogen compound metabolic process;GO:0003883|CTP synthase activity;GO:0043562|cellular response to nitrogen levels;GO:0006221|pyrimidine nucleotide biosynthetic process;GO:0009218|pyrimidine ribonucleotide metabolic process;GO:0003837|beta-ureidopropionase activity;GO:0005829|cytosol;GO:0006212|uracil catabolic process;GO:0005575|cellular_component | GhM_A01G0850.1,GhM_A02G1666.1,GhM_D03G0609.1,GhM_A08G2853.1,GhM_D08G2796.1,GhM_D02G1803.1,GhM_D04G1580.1,GhM_D03G0816.1,GhM_D13G1100.1,GhM_D03G0856.1,GhM_D04G1280.1,GhM_D04G1078.1,GhM_D07G2025.1,GhM_D10G0656.1,GhM_D10G0306.1,GhM_D13G1072.1,GhM_D03G0976.1,GhM_D04G1233.1,GhM_D13G1277.1,GhM_D10G0655.1,GhM_D11G3686.1,GhM_D09G0986.1 | 22 | 0 | Gossypium | Cotton | |||
| - | AT4G26610||AT3G27580||AT5G47750||AT5G55910||AT5G40030||AT2G44830||AT2G26700 | D6PKL1, AGC1-2; D6PKL1 (D6 PROTEIN KINASE LIKE 1); kinase||D6PK; D6PK (D6 PROTEIN KINASE); kinase/ protein kinase||protein kinase, putative||ATPK7, D6PKL3; ATPK7; kinase/ protein serine/threonine kinase||PID2; PID2 (PINOID2); ATP binding / kinase/ protein kinase||D6PKL2, PK5; D6PKL2 (D6 PROTEIN KINASE LIKE 2); kinase | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0009925|basal plasma membrane;GO:0005634|nucleus;GO:0048825|cotyledon development;GO:0010540|basipetal auxin transport;GO:0006468|protein amino acid phosphorylation;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0005730|nucleolus;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0990.1,GhM_D01G0959.1,GhM_A04G0050.1,GhM_D05G4369.1,GhM_A05G4264.1,GhM_D04G0674.1,GhM_A06G2665.1,GhM_D06G2652.1,GhM_A09G0400.1,GhM_D09G0367.1,GhM_A10G1168.1,GhM_D10G0929.1,GhM_A13G1782.1,GhM_A05G4333.1,GhM_D04G0605.1,GhM_A11G0768.1,GhM_D11G0781.1,GhM_D13G1659.1,GhM_D05G1395.1,GhM_A05G1385.1,GhM_D05G0204.1,GhM_A05G0196.1 | 22 | 0 | Gossypium | Cotton | |||
| - | ATCG00680 | PSBB; encodes for CP47, subunit of the photosystem II reaction center. | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A01G1654.1,GhM_A09G1333.1,GhM_A11G0001.1,GhM_A02G1242.1,GhM_Scaf219G343.1,GhM_A04G1024.1,GhM_Scaf274G382.1,GhM_A05G3650.1,GhM_A09G0651.1,GhM_A05G3745.1,GhM_D02G1374.1,GhM_A07G2549.1,GhM_A11G1523.1,GhM_D11G2769.1,GhM_A12G1625.1,GhM_A13G1118.1,GhM_A12G1626.1,GhM_D12G0236.1,GhM_D09G1168.1,GhM_D09G0357.1,GhM_D02G1373.1,GhM_D09G0162.1 | 22 | 0 | Gossypium | Cotton | |||
| - | AT3G09880||AT5G03470||AT3G21650||AT1G13460 | ATB' ALPHA; ATB' ALPHA; protein phosphatase type 2A regulator||serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative||ATB' BETA; ATB' BETA; protein phosphatase type 2A regulator | GO:0005777|peroxisome;GO:0005739|mitochondrion;GO:0007165|signal transduction;GO:0042325|regulation of phosphorylation;GO:0008601|protein phosphatase type 2A regulator activity;GO:0000159|protein phosphatase type 2A complex | GhM_A01G1708.1,GhM_D01G1636.1,GhM_A01G2638.1,GhM_D01G2563.1,GhM_A04G0933.1,GhM_D04G1388.1,GhM_A04G0934.1,GhM_A09G1818.1,GhM_D09G1710.1,GhM_A07G2401.1,GhM_A04G1808.1,GhM_A03G1748.1,GhM_D02G1835.1,GhM_A07G2896.1,GhM_D07G2799.1,GhM_A09G0453.1,GhM_D09G0413.1,GhM_A11G1802.1,GhM_D11G1790.1,GhM_D07G2315.1,GhM_D11G0770.1,GhM_A11G4063.1 | 22 | 0 | Gossypium | Cotton | |||
| - | AT4G38520||AT3G12620||AT3G51370 | protein phosphatase 2C family protein / PP2C family protein||protein phosphatase 2C, putative / PP2C, putative | GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0008287|protein serine/threonine phosphatase complex;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A01G2119.1,GhM_D01G2089.1,GhM_A03G2658.1,GhM_D02G2676.1,GhM_A04G1020.1,GhM_D04G1471.1,GhM_A09G1986.1,GhM_D09G1885.1,GhM_A06G2213.1,GhM_A05G4078.1,GhM_D04G0968.1,GhM_A10G2637.1,GhM_D10G2551.1,GhM_D06G2183.1,GhM_D12G0402.1,GhM_A04G1634.1,GhM_D04G2117.1,GhM_A11G0506.1,GhM_D11G0488.1,GhM_A11G2000.1,GhM_D11G1990.1,GhM_A12G0393.1 | 22 | 0 | Gossypium | Cotton | |||
| - | AT5G22400||AT4G03100||AT2G46710 | rac GTPase activating protein, putative | GO:0005622|intracellular;GO:0009507|chloroplast;GO:0007165|signal transduction;GO:0030675|Rac GTPase activator activity | GhM_A05G0889.1,GhM_D05G0908.1,GhM_A07G1333.1,GhM_D07G1311.1,GhM_A09G1269.1,GhM_D09G1200.1,GhM_D11G1386.1,GhM_A08G0897.1,GhM_D08G0855.1,GhM_A08G1582.1,GhM_D08G1531.1,GhM_A11G1395.1,GhM_D11G1385.1,GhM_A11G1165.1,GhM_A08G1683.1,GhM_D08G1637.1,GhM_D11G1175.1,GhM_A12G1512.1,GhM_D12G1455.1,GhM_D12G1454.1,GhM_A09G1760.1,GhM_D09G1642.1 | 22 | 0 | Gossypium | Cotton | |||
| TA289:GhM_A05G1370.1,GhM_A05G1371.1,GhM_A05G1372.1,GhM_A05G1373.1,GhM_A05G1374.1;TA1907:GhM_D05G1383.1,GhM_D05G1384.1;TA2211:GhM_D07G0604.1,GhM_D07G0605.1 | AT1G15520 | PDR12, ATPDR12; PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances | GO:0046865|terpenoid transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0010193|response to ozone;GO:0009753|response to jasmonic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0006855|drug transmembrane transport;GO:0015692|lead ion transport;GO:0009607|response to biotic stimulus;GO:0009751|response to salicylic acid stimulus;GO:0005886|plasma membrane | GhM_A08G1197.1,GhM_A08G1552.1,GhM_A08G1553.1,GhM_D08G1507.1,GhM_A02G1634.1,GhM_A07G0611.1,GhM_A10G0868.1,GhM_D03G0822.1,GhM_D03G0769.1,GhM_D10G0773.1,GhM_A08G1198.1,GhM_D08G1152.1,GhM_A02G1376.1 | 22 | 3 | Gossypium | Cotton | |||
| TA51:GhM_D02G0093.1,GhM_D02G0094.1,GhM_D02G0095.1,GhM_D02G0096.1,GhM_D02G0097.1,GhM_D02G0098.1,GhM_D02G0099.1,GhM_D02G0101.1,GhM_D02G0103.1;TA171:GhM_A02G0082.1,GhM_A02G0085.1,GhM_A02G0086.1,GhM_A02G0087.1,GhM_A02G0089.1,GhM_A02G0091.1;TA360:GhM_D02G0516.1,GhM_D02G0517.1,GhM_D02G0518.1,GhM_D02G0519.1 | AT3G59200||AT4G14096||AT3G49150||AT1G58310||AT5G44490||AT5G22670||AT3G59210||AT3G59240||AT3G25520||AT4G10400||AT4G14103||AT1G78750||AT5G22730 | ATL5, PGY3, OLI5, RPL5A; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G14103.1); Has 1300 Blast hits to 1271 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein insertion into membrane; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), 60 kDa inner membrane insertion protein (InterPro:IPR001708), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G59240.1); Has 1228 Blast hits to 1197 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 1199; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0022626|cytosolic ribosome;GO:0006913|nucleocytoplasmic transport;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0016021|integral to membrane;GO:0008150|biological_process;GO:0005730|nucleolus;GO:0008283|cell proliferation;GO:0016020|membrane;GO:0005773|vacuole;GO:0009965|leaf morphogenesis;GO:0022625|cytosolic large ribosomal subunit;GO:0005737|cytoplasm;GO:0006412|translation;GO:0042254|ribosome biogenesis;GO:0009955|adaxial/abaxial pattern formation;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008097|5S rRNA binding;GO:0005634|nucleus;GO:0051205|protein insertion into membrane;GO:0005840|ribosome;GO:0010015|root morphogenesis | GhM_D09G2832.1,GhM_A02G0084.1,GhM_A02G0083.1 | 22 | 3 | Gossypium | Cotton | |||
| TA262:GhM_D09G2578.1,GhM_D09G2588.1,GhM_D09G2589.1,GhM_D09G2590.1,GhM_D09G2591.1;TA534:GhM_A09G2700.1,GhM_A09G2710.1,GhM_A09G2711.1,GhM_A09G2712.1;TA1301:GhM_A11G3119.1,GhM_A11G3120.1;TA2627:GhM_D11G3057.1,GhM_D11G3058.1 | AT3G22910||AT3G63380||AT4G29900||AT3G21180 | ACA10, CIF1, ATACA10; ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10); calcium-transporting ATPase/ calmodulin binding||ACA9, ATACA9; ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9); calcium-transporting ATPase/ calmodulin binding||calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)||calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) | GO:0048281|inflorescence morphogenesis;GO:0008152|metabolic process;GO:0048367|shoot development;GO:0009555|pollen development;GO:0006754|ATP biosynthetic process;GO:0005516|calmodulin binding;GO:0005388|calcium-transporting ATPase activity;GO:0006812|cation transport;GO:0006816|calcium ion transport;GO:0007338|single fertilization;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A08G0588.1,GhM_A08G0805.1,GhM_D08G0768.1,GhM_A08G0250.1,GhM_D08G0241.1,GhM_A05G1258.1,GhM_D05G1275.1,GhM_D10G0884.1,GhM_A10G1979.1 | 22 | 4 | Gossypium | Cotton | |||
| TA1300:GhM_A11G3112.1,GhM_A11G3113.1;TA2626:GhM_D11G3047.1,GhM_D11G3048.1;TA1527:GhM_A13G2280.1,GhM_A13G2281.1;TA2838:GhM_D13G2165.1,GhM_D13G2166.1;TA2886:GhM_A02G0382.1,GhM_A02G0383.1;TA1650:GhM_D02G0401.1,GhM_D02G0402.1;TA3589:GhM_A09G2726.1,GhM_A09G2727.1;TA2438:GhM_D09G2602.1,GhM_D09G2603.1 | AT3G04730||AT5G43700||AT4G14550||AT3G23050 | IAA16; IAA16; transcription factor||IAA14, SLR; IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor||IAA7, AXR2; IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor||ATAUX2-11, IAA4; ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor | GO:0005515|protein binding;GO:0009630|gravitropism;GO:0006417|regulation of translation;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010102|lateral root morphogenesis;GO:0008180|signalosome;GO:0010583|response to cyclopentenone;GO:0009611|response to wounding;GO:0003677|DNA binding;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0009414|response to water deprivation;GO:0016564|transcription repressor activity;GO:0040008|regulation of growth;GO:0000502|proteasome complex | GhM_A07G2689.1,GhM_A07G2688.1,GhM_A10G1359.1,GhM_D10G1743.1,GhM_D07G2586.1,GhM_D07G2585.1 | 22 | 8 | Gossypium | Cotton | |||
| TA757:GhM_D06G0304.1,GhM_D06G0313.1,GhM_D06G0314.1;TA956:GhM_A02G0948.1,GhM_A02G0949.1,GhM_A02G0950.1;TA1677:GhM_D02G0941.1,GhM_D02G0944.1;TA3174:GhM_A05G2413.1,GhM_A05G2414.1;TA1934:GhM_D05G2425.1,GhM_D05G2426.1;TA3191:GhM_A05G2963.1,GhM_A05G2964.1;TA1951:GhM_D05G2972.1,GhM_D05G2973.1;TA3266:GhM_A06G0298.1,GhM_A06G0301.1 | AT5G49660||AT1G09970 | leucine-rich repeat transmembrane protein kinase, putative||LRR XI-23; LRR XI-23; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2240.1,GhM_D01G2196.1,GhM_A05G2965.1,GhM_A04G1675.1 | 22 | 8 | Gossypium | Cotton | |||
| - | AT4G38360||AT2G17440||AT4G35470||AT1G28350||AT1G04820 | unknown protein||ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tyrosine-tRNA ligase||leucine-rich repeat family protein||TUA4; TUA4; structural constituent of cytoskeleton | GO:0046686|response to cadmium ion;GO:0045298|tubulin complex;GO:0006418|tRNA aminoacylation for protein translation;GO:0005886|plasma membrane;GO:0004812|aminoacyl-tRNA ligase activity;GO:0008150|biological_process;GO:0005618|cell wall;GO:0005200|structural constituent of cytoskeleton;GO:0005737|cytoplasm;GO:0005829|cytosol;GO:0006412|translation;GO:0007017|microtubule-based process;GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0004831|tyrosine-tRNA ligase activity;GO:0006437|tyrosyl-tRNA aminoacylation;GO:0005524|ATP binding | GhM_A01G0035.1,GhM_D01G0019.1,GhM_A01G2054.1,GhM_D01G1355.1,GhM_A01G2173.1,GhM_D01G2140.1,GhM_A03G2700.1,GhM_D02G2718.1,GhM_A12G0364.1,GhM_D12G0431.1,GhM_D12G2130.1,GhM_D06G1851.1,GhM_D08G0890.1,GhM_A08G2091.1,GhM_D08G2045.1,GhM_D02G1031.1,GhM_D04G1125.1,GhM_D09G0026.1,GhM_D05G3874.1,GhM_D06G0771.1,GhM_D04G0791.1 | 21 | 0 | Gossypium | Cotton | |||
| - | AT2G32670||AT4G15780||AT4G16230||AT1G04760 | ATVAMP726, VAMP726; ATVAMP726||carboxylesterase/ hydrolase, acting on ester bonds||ATVAMP724, VAMP724; ATVAMP724||ATVAMP725, VAMP725; ATVAMP725 | GO:0012505|endomembrane system;GO:0016192|vesicle-mediated transport;GO:0009507|chloroplast;GO:0006810|transport;GO:0003674|molecular_function;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0004091|carboxylesterase activity;GO:0005768|endosome;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G0295.1,GhM_D01G0272.1,GhM_A09G2916.1,GhM_D09G2777.1,GhM_A10G0504.1,GhM_A05G1617.1,GhM_D05G1632.1,GhM_A05G1618.1,GhM_A07G1934.1,GhM_D07G1888.1,GhM_A08G0609.1,GhM_D08G0579.1,GhM_A09G2466.1,GhM_A09G0756.1,GhM_D09G0696.1,GhM_A10G1489.1,GhM_D10G1625.1,GhM_A11G1602.1,GhM_D11G1595.1,GhM_D09G2355.1,GhM_D10G0483.1 | 21 | 0 | Gossypium | Cotton | |||
| - | AT1G10430||AT3G58500||AT2G42500 | PP2A-4; PP2A-4; hydrolase/ protein serine/threonine phosphatase||PP2A-2; PP2A-2; protein serine/threonine phosphatase||PP2A-3, EP7; PP2A-3 (PROTEIN PHOSPHATASE 2A-3); protein serine/threonine phosphatase | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0006470|protein amino acid dephosphorylation;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0005730|nucleolus;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity;GO:0000159|protein phosphatase type 2A complex | GhM_A01G1537.1,GhM_D01G1443.1,GhM_A01G2473.1,GhM_D01G2412.1,GhM_A04G0627.1,GhM_D04G1166.1,GhM_A04G1252.1,GhM_D04G1733.1,GhM_A05G3815.1,GhM_D05G3731.1,GhM_A08G0178.1,GhM_D08G0165.1,GhM_A11G0364.1,GhM_D11G0350.1,GhM_A12G2216.1,GhM_D12G2126.1,GhM_A13G2759.1,GhM_D05G0006.1,GhM_D13G2651.1,GhM_D13G2650.1,GhM_D05G2930.1 | 21 | 0 | Gossypium | Cotton | |||
| - | AT3G05030||AT1G54580||AT5G27200||AT3G06370 | ACP2; ACP2 (ACYL CARRIER PROTEIN 2); acyl carrier||NHX2, ATNHX2; NHX2 (SODIUM HYDROGEN EXCHANGER 2); sodium ion transmembrane transporter/ sodium:hydrogen antiporter||ACP5; ACP5 (acyl carrier protein 5); acyl carrier||NHX4, ATNHX4; NHX4 (SODIUM HYDROGEN EXCHANGER 4); sodium ion transmembrane transporter/ sodium:hydrogen antiporter | GO:0012505|endomembrane system;GO:0009507|chloroplast;GO:0015081|sodium ion transmembrane transporter activity;GO:0006633|fatty acid biosynthetic process;GO:0006885|regulation of pH;GO:0006814|sodium ion transport;GO:0006812|cation transport;GO:0015385|sodium:hydrogen antiporter activity;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0000036|acyl carrier activity;GO:0016021|integral to membrane | GhM_A02G0517.1,GhM_D02G0508.1,GhM_A09G0873.1,GhM_D09G2717.1,GhM_A09G2843.1,GhM_A11G2961.1,GhM_A08G2790.1,GhM_D08G2734.1,GhM_A13G1366.1,GhM_A11G2958.1,GhM_D11G2891.1,GhM_A13G2202.1,GhM_A09G2842.1,GhM_D09G2716.1,GhM_D13G2090.1,GhM_D13G1268.1,GhM_A12G0082.1,GhM_D12G0090.1,GhM_D11G2895.1,GhM_D09G0811.1,GhM_D12G0091.1 | 21 | 0 | Gossypium | Cotton | |||
| - | ATCG00750||ATCG00740 | RPOA; RNA polymerase alpha subunit||RPS11; 30S chloroplast ribosomal protein S11 | GO:0009507|chloroplast;GO:0009295|nucleoid | GhM_A02G1414.1,GhM_Scaf236G364.1,GhM_A05G0945.1,GhM_A12G0268.1,GhM_A05G3747.1,GhM_A08G0801.1,GhM_A13G1122.1,GhM_A08G1699.1,GhM_D02G1377.1,GhM_A08G0802.1,GhM_A12G0269.1,GhM_A04G0680.1,GhM_D02G2119.1,GhM_D03G0729.1,GhM_A13G1121.1,GhM_A08G1719.1,GhM_Scaf003G062.1,GhM_D08G2248.1,GhM_D02G1314.1,GhM_D08G1772.1,GhM_D08G1646.1 | 21 | 0 | Gossypium | Cotton | |||
| - | AT1G17720||AT1G51690 | ATB BETA; ATB BETA; nucleotide binding / protein phosphatase type 2A regulator||ATB ALPHA; ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | GO:0006470|protein amino acid dephosphorylation;GO:0000166|nucleotide binding;GO:0007165|signal transduction;GO:0008601|protein phosphatase type 2A regulator activity;GO:0000159|protein phosphatase type 2A complex | GhM_A02G1519.1,GhM_D03G0634.1,GhM_A05G0471.1,GhM_D05G0495.1,GhM_A05G0470.1,GhM_A07G0263.1,GhM_A05G1498.1,GhM_D05G1510.1,GhM_A05G4355.1,GhM_D12G0400.1,GhM_A06G1069.1,GhM_D06G1087.1,GhM_A06G1068.1,GhM_D07G0262.1,GhM_A07G1365.1,GhM_D12G2559.1,GhM_A10G0680.1,GhM_A09G1089.1,GhM_D09G1024.1,GhM_D10G0657.1,GhM_D06G0394.1 | 21 | 0 | Gossypium | Cotton | |||
| - | AT1G66510||AT5G61770 | AAR2 protein family||PPAN; PPAN (PETER PAN-LIKE PROTEIN) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G1723.1,GhM_A07G2498.1,GhM_A12G0005.1,GhM_A08G2961.1,GhM_A08G1605.1,GhM_D08G1559.1,GhM_A09G1930.1,GhM_A13G1773.1,GhM_A10G1785.1,GhM_D02G2047.1,GhM_D02G1488.1,GhM_D02G2104.1,GhM_D03G0052.1,GhM_D09G0251.1,GhM_D04G1503.1,GhM_D10G1384.1,GhM_D02G1487.1,GhM_A08G0676.1,GhM_D08G0647.1,GhM_D04G1683.1,GhM_D06G1564.1 | 21 | 0 | Gossypium | Cotton | |||
| - | ATCG00830||AT3G07140 | RPL2.1; encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex||GPI transamidase component Gpi16 subunit family protein | GO:0003923|GPI-anchor transamidase activity;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005783|endoplasmic reticulum | GhM_A05G3749.1,GhM_D02G1381.1,GhM_A05G3750.1,GhM_A12G0957.1,GhM_Scaf005G078.1,GhM_A09G1236.1,GhM_Scaf034G161.1,GhM_A12G0262.1,GhM_A13G1127.1,GhM_A12G0956.1,GhM_D07G0844.1,GhM_D07G2284.1,GhM_D08G1400.1,GhM_D09G1017.1,GhM_D04G0326.1,GhM_D11G1624.1,GhM_A11G1636.1,GhM_A07G1956.1,GhM_D07G1909.1,GhM_D11G1625.1,GhM_D11G2397.1 | 21 | 0 | Gossypium | Cotton | |||
| TA1638:GhM_D02G0104.1,GhM_D02G0105.1 | AT2G43790||AT4G01370||AT3G45640||AT1G07880 | ATMPK4, MPK4; ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase||ATMPK13; ATMPK13; MAP kinase/ kinase||ATMPK3, MPK3; ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3); MAP kinase/ kinase/ protein binding / protein kinase||ATMPK6, MPK6, MAPK6; ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6); MAP kinase/ kinase | GO:0042542|response to hydrogen peroxide;GO:0006972|hyperosmotic response;GO:0009723|response to ethylene stimulus;GO:0005575|cellular_component;GO:0006950|response to stress;GO:0006979|response to oxidative stress;GO:0010374|stomatal complex development;GO:0010375|stomatal complex patterning;GO:0000169|activation of MAPK activity involved in osmosensory signaling pathway;GO:0000302|response to reactive oxygen species;GO:0009868|jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway;GO:0009617|response to bacterium;GO:0016301|kinase activity;GO:0004672|protein kinase activity;GO:0009737|response to abscisic acid stimulus;GO:0009861|jasmonic acid and ethylene-dependent systemic resistance;GO:0006970|response to osmotic stress;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0016310|phosphorylation;GO:0009738|abscisic acid mediated signaling pathway;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0048481|ovule development;GO:0005515|protein binding;GO:0009620|response to fungus;GO:0010120|camalexin biosynthetic process;GO:0004707|MAP kinase activity;GO:0005634|nucleus;GO:0042539|hypotonic salinity response;GO:0009611|response to wounding;GO:0010200|response to chitin;GO:0007165|signal transduction;GO:0009607|response to biotic stimulus;GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway;GO:0042742|defense response to bacterium;GO:0009409|response to cold | GhM_A02G0092.1,GhM_A03G0328.1,GhM_A03G0495.1,GhM_A03G1134.1,GhM_A05G1100.1,GhM_A05G1107.1,GhM_A07G1723.1,GhM_A08G1794.1,GhM_A10G1818.1,GhM_A12G1427.1,GhM_A12G2869.1,GhM_D02G1231.1,GhM_D10G1314.1,GhM_D03G1634.1,GhM_D08G1746.1,GhM_D03G1796.1,GhM_D12G2760.1,GhM_D05G1115.1,GhM_D05G1124.1 | 21 | 1 | Gossypium | Cotton | |||
| TA2193:GhM_A01G2720.1,GhM_A01G2721.1 | AT3G46010||AT5G59880||AT5G59890||AT4G25590||AT4G00680||AT1G01750 | ADF3; ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin binding||ADF8; ADF8 (ACTIN DEPOLYMERIZING FACTOR 8); actin binding||ADF7; ADF7 (actin depolymerizing factor 7); actin binding||ADF4, ATADF4; ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding||ADF1, atadf, ATADF1; ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding||ADF11; ADF11 (ACTIN DEPOLYMERIZING FACTOR 11); actin binding | GO:0008150|biological_process;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0005739|mitochondrion;GO:0005622|intracellular;GO:0007015|actin filament organization;GO:0005886|plasma membrane;GO:0003779|actin binding;GO:0042742|defense response to bacterium | GhM_D01G2650.1,GhM_A13G2925.1,GhM_D03G1580.1,GhM_A03G0549.1,GhM_D13G2825.1,GhM_A13G0240.1,GhM_D13G0225.1,GhM_D04G0725.1,GhM_A09G2209.1,GhM_D09G2115.1,GhM_A08G2365.1,GhM_A09G0530.1,GhM_D08G2311.1,GhM_D09G0546.1,GhM_A03G0284.1,GhM_D03G1837.1,GhM_A11G1014.1,GhM_D11G1028.1,GhM_A05G4205.1 | 21 | 1 | Gossypium | Cotton | |||
| TA70:GhM_A11G3507.1,GhM_A11G3528.1,GhM_A11G3566.1,GhM_A11G3567.1,GhM_A11G3568.1,GhM_A11G3569.1,GhM_A11G3571.1,GhM_A11G3572.1;TA273:GhM_D11G3484.1,GhM_D11G3485.1,GhM_D11G3487.1,GhM_D11G3488.1,GhM_D11G3489.1 | AT4G27190||AT1G61180||AT4G27220||AT1G12220||AT1G12210||AT4G10780||AT4G26090||AT5G43740 | RFL1; RFL1 (RPS5-like 1); ATP binding / protein binding||disease resistance protein (NBS-LRR class), putative||disease resistance protein (CC-NBS-LRR class), putative||RPS2; RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding||RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding | GO:0016045|detection of bacterium;GO:0005515|protein binding;GO:0012505|endomembrane system;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0005622|intracellular;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009617|response to bacterium;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_D11G3419.1,GhM_D11G3450.1,GhM_D09G1983.1,GhM_D11G0755.1,GhM_A03G1178.1,GhM_A10G0741.1,GhM_D09G1984.1,GhM_D03G2082.1 | 21 | 2 | Gossypium | Cotton | |||
| TA88:GhM_D11G3616.1,GhM_D11G3617.1,GhM_D11G3618.1,GhM_D11G3619.1,GhM_D11G3621.1,GhM_D11G3637.1,GhM_D11G3638.1,GhM_D11G3640.1;TA134:GhM_A11G3704.1,GhM_A11G3705.1,GhM_A11G3706.1,GhM_A11G3710.1,GhM_A11G3711.1,GhM_A11G3714.1 | AT2G34930||AT1G45616||AT3G19320||AT1G56450 | PBG1; PBG1; peptidase/ threonine-type endopeptidase||leucine-rich repeat family protein||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding||disease resistance family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0022626|cytosolic ribosome;GO:0008233|peptidase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0046686|response to cadmium ion;GO:0006952|defense response;GO:0007165|signal transduction;GO:0009651|response to salt stress;GO:0005618|cell wall;GO:0005839|proteasome core complex;GO:0050832|defense response to fungus;GO:0016020|membrane | GhM_A11G3163.1,GhM_A11G3434.1,GhM_A13G1540.1,GhM_D13G1424.1,GhM_D11G3344.1,GhM_D11G3633.1,GhM_D11G3088.1 | 21 | 2 | Gossypium | Cotton | |||
| TA23:GhM_D06G2286.1,GhM_D06G2292.1,GhM_D06G2293.1,GhM_D06G2294.1,GhM_D06G2295.1,GhM_D06G2296.1,GhM_D06G2297.1,GhM_D06G2298.1,GhM_D06G2299.1,GhM_D06G2300.1,GhM_D06G2301.1,GhM_D06G2312.1,GhM_D06G2313.1;TA185:GhM_A06G2292.1,GhM_A06G2294.1,GhM_A06G2295.1,GhM_A06G2297.1,GhM_A06G2298.1,GhM_A06G2299.1;TA3329:GhM_A06G2307.1,GhM_A06G2308.1 | AT5G04200 | AtMC9; AtMC9 (metacaspase 9); cysteine-type peptidase | GO:0006508|proteolysis;GO:0048046|apoplast | - | 21 | 3 | Gossypium | Cotton | |||
| TA45:GhM_D08G0207.1,GhM_D08G0210.1,GhM_D08G0211.1,GhM_D08G0212.1,GhM_D08G0213.1,GhM_D08G0214.1,GhM_D08G0215.1,GhM_D08G0216.1,GhM_D08G0217.1,GhM_D08G0218.1;TA64:GhM_A08G0217.1,GhM_A08G0218.1,GhM_A08G0219.1,GhM_A08G0220.1,GhM_A08G0221.1,GhM_A08G0222.1,GhM_A08G0225.1,GhM_A08G0226.1,GhM_A08G0227.1;TA2293:GhM_D08G0208.1,GhM_D08G0209.1 | AT4G12560||AT3G06240 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0031348|negative regulation of defense response;GO:0005575|cellular_component | - | 21 | 3 | Gossypium | Cotton | |||
| TA60:GhM_D11G3803.1,GhM_D11G3806.1,GhM_D11G3807.1,GhM_D11G3808.1,GhM_D11G3810.1,GhM_D11G3814.1,GhM_D11G3817.1,GhM_D11G3818.1,GhM_D11G3819.1;TA136:GhM_A11G3893.1,GhM_A11G3895.1,GhM_A11G3899.1,GhM_A11G3900.1,GhM_A11G3901.1,GhM_A11G3902.1;TA1289:GhM_A11G2754.1,GhM_A11G2756.1 | AT4G27190||AT5G05400||AT5G63020||AT1G61180 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A11G3896.1,GhM_A11G3897.1,GhM_D11G3805.1,GhM_D11G3804.1 | 21 | 3 | Gossypium | Cotton | |||
| TA718:GhM_D05G0103.1,GhM_D05G0105.1,GhM_D05G0110.1;TA1014:GhM_A05G0099.1,GhM_A05G0101.1,GhM_A05G0107.1;TA2304:GhM_D08G0659.1,GhM_D08G0661.1 | AT4G32410||AT5G17420||AT5G05170||AT1G07985||AT4G18780 | CESA8, IRX1, ATCESA8, LEW2; IRX1 (IRREGULAR XYLEM 1); cellulose synthase/ transferase, transferring glycosyl groups||IRX3, CESA7, ATCESA7, MUR10; IRX3 (IRREGULAR XYLEM 3); cellulose synthase||CESA1, RSW1; CESA1 (CELLULOSE SYNTHASE 1); cellulose synthase/ transferase, transferring glycosyl groups||CESA3, IXR1, ATCESA3, ATH-B, CEV1; CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/ transferase, transferring glycosyl groups||Expressed protein | GO:0009834|secondary cell wall biogenesis;GO:0016759|cellulose synthase activity;GO:0010116|positive regulation of abscisic acid biosynthetic process;GO:0005886|plasma membrane;GO:0008150|biological_process;GO:0010400|rhamnogalacturonan I side chain metabolic process;GO:0006952|defense response;GO:0005794|Golgi apparatus;GO:0005618|cell wall;GO:0009832|plant-type cell wall biogenesis;GO:0016757|transferase activity, transferring glycosyl groups;GO:0050832|defense response to fungus;GO:0006970|response to osmotic stress;GO:0009833|primary cell wall biogenesis;GO:0030244|cellulose biosynthetic process;GO:0042538|hyperosmotic salinity response;GO:0009414|response to water deprivation;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0042742|defense response to bacterium | GhM_A02G1433.1,GhM_A08G1941.1,GhM_D08G1890.1,GhM_A08G0690.1,GhM_A05G1731.1,GhM_A08G0694.1,GhM_A08G0695.1,GhM_D03G0860.1,GhM_D05G1740.1,GhM_D05G1741.1,GhM_A10G0378.1,GhM_D10G0367.1,GhM_D07G0475.1 | 21 | 3 | Gossypium | Cotton | |||
| TA93:GhM_A04G0316.1,GhM_A04G0336.1,GhM_A04G0337.1,GhM_A04G0339.1,GhM_A04G0340.1,GhM_A04G0341.1,GhM_A04G0342.1,GhM_A04G0345.1;TA150:GhM_D05G4060.1,GhM_D05G4061.1,GhM_D05G4063.1,GhM_D05G4064.1,GhM_D05G4065.1,GhM_D05G4066.1;TA741:GhM_D05G4023.1,GhM_D05G4024.1,GhM_D05G4026.1 | AT4G27190||AT1G61180||AT5G43730||AT5G05400||AT5G63020||AT1G62630 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_D05G4000.1,GhM_D10G1797.1,GhM_A04G0265.1,GhM_A10G1295.1 | 21 | 3 | Gossypium | Cotton | |||
| TA123:GhM_A03G2218.1,GhM_A03G2219.1,GhM_A03G2220.1,GhM_A03G2221.1,GhM_A03G2222.1,GhM_A03G2223.1,GhM_A03G2224.1;TA225:GhM_D02G2244.1,GhM_D02G2245.1,GhM_D02G2246.1,GhM_D02G2247.1,GhM_D02G2248.1;TA463:GhM_D13G0655.1,GhM_D13G0656.1,GhM_D13G0657.1,GhM_D13G0658.1;TA623:GhM_A13G0722.1,GhM_A13G0726.1,GhM_A13G0727.1 | AT5G23370||AT5G08350||AT5G23360 | GRAM domain-containing protein / ABA-responsive protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A12G1718.1,GhM_D12G1668.1 | 21 | 4 | Gossypium | Cotton | |||
| TA127:GhM_A05G4334.1,GhM_A05G4335.1,GhM_A05G4336.1,GhM_A05G4337.1,GhM_A05G4338.1,GhM_A05G4340.1,GhM_A05G4341.1;TA146:GhM_D04G0596.1,GhM_D04G0598.1,GhM_D04G0599.1,GhM_D04G0600.1,GhM_D04G0602.1,GhM_D04G0603.1;TA3415:GhM_A07G2780.1,GhM_A07G2781.1;TA2281:GhM_D07G2686.1,GhM_D07G2687.1 | AT5G40020 | pathogenesis-related thaumatin family protein | GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0003674|molecular_function | GhM_D04G0604.1,GhM_D10G0946.1,GhM_A10G1153.1,GhM_D04G0597.1 | 21 | 4 | Gossypium | Cotton | |||
| TA178:GhM_A05G1710.1,GhM_A05G1711.1,GhM_A05G1712.1,GhM_A05G1713.1,GhM_A05G1714.1,GhM_A05G1715.1;TA233:GhM_D05G1721.1,GhM_D05G1722.1,GhM_D05G1723.1,GhM_D05G1724.1,GhM_D05G1725.1;TA765:GhM_D06G1754.1,GhM_D06G1755.1,GhM_D06G1758.1;TA503:GhM_A06G1603.1,GhM_A06G1604.1,GhM_A06G1605.1,GhM_A06G1606.1 | AT3G14840||AT1G07650||AT1G29750||AT1G53430 | leucine-rich repeat family protein / protein kinase family protein||leucine-rich repeat transmembrane protein kinase, putative||RKF1; RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase | GO:0012505|endomembrane system;GO:0004702|receptor signaling protein serine/threonine kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A10G2234.1,GhM_D09G0039.1,GhM_A12G0467.1 | 21 | 4 | Gossypium | Cotton | |||
| TA54:GhM_D05G4195.1,GhM_D05G4204.1,GhM_D05G4205.1,GhM_D05G4210.1,GhM_D05G4211.1,GhM_D05G4212.1,GhM_D05G4221.1,GhM_D05G4230.1,GhM_D05G4231.1;TA2000:GhM_D05G4425.1,GhM_D05G4426.1;TA441:GhM_D10G2696.1,GhM_D10G2697.1,GhM_D10G2699.1,GhM_D10G2700.1;TA3046:GhM_A04G0173.1,GhM_A04G0176.1 | AT3G47110||AT5G39390||AT3G47090||AT3G47580||AT3G47570 | leucine-rich repeat transmembrane protein kinase, putative||leucine-rich repeat family protein / protein kinase family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2774.1,GhM_A04G0175.1,GhM_D05G4086.1,GhM_D05G4229.1 | 21 | 4 | Gossypium | Cotton | |||
| TA22:GhM_D05G4196.1,GhM_D05G4197.1,GhM_D05G4199.1,GhM_D05G4200.1,GhM_D05G4202.1,GhM_D05G4213.1,GhM_D05G4215.1,GhM_D05G4218.1,GhM_D05G4222.1,GhM_D05G4224.1,GhM_D05G4225.1,GhM_D05G4226.1,GhM_D05G4232.1;TA1986:GhM_D05G4052.1,GhM_D05G4053.1;TA3049:GhM_A04G0206.1,GhM_A04G0207.1;TA3047:GhM_A04G0177.1,GhM_A04G0178.1;TA1999:GhM_D05G4421.1,GhM_D05G4424.1 | AT4G27190||AT5G43730||AT5G05400||AT1G61300||AT1G61190||AT1G12280||AT1G52660 | ATP binding||disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | - | 21 | 5 | Gossypium | Cotton | |||
| TA89:GhM_D12G0419.1,GhM_D12G0420.1,GhM_D12G0421.1,GhM_D12G0422.1,GhM_D12G0423.1,GhM_D12G0424.1,GhM_D12G0425.1,GhM_D12G0426.1;TA3165:GhM_A05G1979.1,GhM_A05G1980.1;TA1254:GhM_A11G1276.1,GhM_A11G1278.1;TA792:GhM_A01G2157.1,GhM_A01G2158.1,GhM_A01G2159.1;TA338:GhM_A12G0369.1,GhM_A12G0370.1,GhM_A12G0371.1,GhM_A12G0372.1 | AT4G35200||AT2G17080||AT4G35210||AT2G17070||AT3G51400 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G1277.1,GhM_A07G1351.1 | 21 | 5 | Gossypium | Cotton | |||
| TA1092:GhM_A08G1589.1,GhM_A08G1590.1,GhM_A08G1593.1;TA1258:GhM_A11G1377.1,GhM_A11G1378.1;TA2583:GhM_D11G1370.1,GhM_D11G1371.1;TA2320:GhM_D08G1540.1,GhM_D08G1544.1;TA1350:GhM_A12G0091.1,GhM_A12G0092.1;TA2679:GhM_D12G0098.1,GhM_D12G0099.1 | AT2G30540||AT3G62950||AT1G03020||AT3G62930 | glutaredoxin family protein | GO:0012505|endomembrane system;GO:0015035|protein disulfide oxidoreductase activity;GO:0045454|cell redox homeostasis;GO:0008794|arsenate reductase (glutaredoxin) activity;GO:0005575|cellular_component;GO:0009055|electron carrier activity | GhM_A08G0918.1,GhM_D08G0875.1,GhM_A08G0919.1,GhM_A11G1376.1,GhM_D08G0877.1,GhM_D11G1369.1,GhM_A12G0086.1,GhM_D12G0095.1 | 21 | 6 | Gossypium | Cotton | |||
| TA711:GhM_D04G2074.1,GhM_D04G2076.1,GhM_D04G2078.1;TA3100:GhM_A04G1596.1,GhM_A04G1598.1;TA1853:GhM_D04G2104.1,GhM_D04G2106.1;TA1008:GhM_A04G1624.1,GhM_A04G1625.1,GhM_A04G1626.1;TA3099:GhM_A04G1595.1,GhM_A04G1599.1;TA1850:GhM_D04G2073.1,GhM_D04G2075.1;TA1854:GhM_D04G2107.1,GhM_D04G2109.1 | AT5G22250||AT3G44260||AT4G38700||AT2G21110||AT4G38630 | disease resistance-responsive family protein||RPN10, MCB1, ATMCB1, MBP1; RPN10 (REGULATORY PARTICLE NON-ATPASE 10); peptide receptor||CCR4-NOT transcription complex protein, putative | GO:0012505|endomembrane system;GO:0004540|ribonuclease activity;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0006952|defense response;GO:0003676|nucleic acid binding;GO:0009607|response to biotic stimulus;GO:0016020|membrane;GO:0009451|RNA modification | GhM_A02G2187.1,GhM_A03G2643.1,GhM_A04G1630.1,GhM_D02G2662.1,GhM_D03G0084.1 | 21 | 7 | Gossypium | Cotton | |||
| - | AT4G02570||AT3G60350||AT2G44900 | ATCUL1, CUL1, AXR6; ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding||armadillo/beta-catenin repeat family protein / F-box family protein | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0010265|SCF complex assembly;GO:0005819|spindle;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0009793|embryonic development ending in seed dormancy;GO:0000151|ubiquitin ligase complex;GO:0005488|binding;GO:0005737|cytoplasm;GO:0009753|response to jasmonic acid stimulus;GO:0048527|lateral root development;GO:0009524|phragmoplast;GO:0007049|cell cycle;GO:0004842|ubiquitin-protein ligase activity;GO:0009867|jasmonic acid mediated signaling pathway;GO:0042752|regulation of circadian rhythm;GO:0000794|condensed nuclear chromosome | GhM_A01G0292.1,GhM_D01G0269.1,GhM_A08G0934.1,GhM_A12G0097.1,GhM_A09G0882.1,GhM_D09G0818.1,GhM_A10G2043.1,GhM_D10G1981.1,GhM_A11G1371.1,GhM_D11G1364.1,GhM_D02G1884.1,GhM_D01G1962.1,GhM_D02G1621.1,GhM_D02G1883.1,GhM_A03G0809.1,GhM_A11G0491.1,GhM_D11G0473.1,GhM_A03G0810.1,GhM_D12G0107.1,GhM_D08G0892.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT3G53520||AT3G46440||AT3G62830||AT2G28760 | UXS2, ATUXS2, AUD1; AUD1; UDP-glucuronate decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase||UXS1, ATUXS1; UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); UDP-glucuronate decarboxylase/ catalytic||UXS6; NAD-dependent epimerase/dehydratase family protein||UXS5; UXS5; UDP-glucuronate decarboxylase/ catalytic | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0000139|Golgi membrane;GO:0008460|dTDP-glucose 4,6-dehydratase activity;GO:0005488|binding;GO:0019305|dTDP-rhamnose biosynthetic process;GO:0044237|cellular metabolic process;GO:0050662|coenzyme binding;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0048040|UDP-glucuronate decarboxylase activity;GO:0009225|nucleotide-sugar metabolic process;GO:0042732|D-xylose metabolic process | GhM_A01G2706.1,GhM_D01G2636.1,GhM_A03G0562.1,GhM_A02G0562.1,GhM_D02G0549.1,GhM_A05G1067.1,GhM_A04G1035.1,GhM_D04G1488.1,GhM_A08G0956.1,GhM_D08G0911.1,GhM_A10G2743.1,GhM_A05G4199.1,GhM_D04G0730.1,GhM_A11G1343.1,GhM_D11G1341.1,GhM_A12G1696.1,GhM_D12G1643.1,GhM_D03G1568.1,GhM_D05G1081.1,GhM_D10G2675.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT5G14600||AT5G49410||AT5G06240 | unknown protein||tRNA (adenine-N1-)-methyltransferase||emb2735; emb2735 (embryo defective 2735) | GO:0008150|biological_process;GO:0030488|tRNA methylation;GO:0003674|molecular_function;GO:0016429|tRNA (adenine-N1-)-methyltransferase activity;GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component | GhM_A01G2868.1,GhM_D04G0004.1,GhM_A04G0003.1,GhM_D01G0007.1,GhM_D12G3268.1,GhM_A05G4940.1,GhM_D03G0003.1,GhM_A07G2987.1,GhM_A10G3045.1,GhM_A10G0780.1,GhM_D10G0865.1,GhM_D08G0001.1,GhM_D04G2397.1,GhM_D11G4031.1,GhM_D10G0004.1,GhM_D12G0001.1,GhM_A11G0005.1,GhM_A13G1575.1,GhM_D10G2991.1,GhM_D13G1452.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT1G05810||AT3G07410||AT2G43130||AT5G47520||AT5G50330||AT4G24810||AT2G31680 | AtRABA5b; AtRABA5b (Arabidopsis Rab GTPase homolog A5b); GTP binding||ATP binding / protein kinase||ABC1 family protein||AtRABA5a; AtRABA5a (Arabidopsis Rab GTPase homolog A5a); GTP binding||ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E; RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding||ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C; ARA4; GTP binding / GTPase/ protein binding||AtRABA5d; AtRABA5d (Arabidopsis Rab GTPase homolog A5d); GTP binding | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003924|GTPase activity;GO:0005525|GTP binding;GO:0004672|protein kinase activity;GO:0005802|trans-Golgi network;GO:0005575|cellular_component;GO:0005795|Golgi stack;GO:0006468|protein amino acid phosphorylation;GO:0009408|response to heat;GO:0048219|inter-Golgi cisterna vesicle-mediated transport;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005798|Golgi-associated vesicle;GO:0005524|ATP binding | GhM_A02G0179.1,GhM_D02G0188.1,GhM_A07G1998.1,GhM_D07G1944.1,GhM_A07G2547.1,GhM_D07G2450.1,GhM_A10G1689.1,GhM_A10G0098.1,GhM_A03G2046.1,GhM_A07G2763.1,GhM_A06G1079.1,GhM_A13G1418.1,GhM_A11G3321.1,GhM_A11G2981.1,GhM_A06G2044.1,GhM_D06G2027.1,GhM_D10G0082.1,GhM_D10G1434.1,GhM_A12G0604.1,GhM_D12G0602.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT1G52740||AT3G54560 | HTA9; HTA9 (HISTONE H2A PROTEIN 9); DNA binding||HTA11; HTA11; DNA binding | GO:0005634|nucleus;GO:0009908|flower development;GO:0009909|regulation of flower development;GO:0003677|DNA binding;GO:0042742|defense response to bacterium;GO:0005773|vacuole;GO:0000786|nucleosome | GhM_A02G1638.1,GhM_D03G0836.1,GhM_A05G1002.1,GhM_A08G1635.1,GhM_A05G1378.1,GhM_D09G1066.1,GhM_A07G2681.1,GhM_D07G2577.1,GhM_A08G2439.1,GhM_D08G2387.1,GhM_A09G1139.1,GhM_D05G1388.1,GhM_A11G1483.1,GhM_D11G1471.1,GhM_A13G2602.1,GhM_D13G2503.1,GhM_D10G2155.1,GhM_D04G1777.1,GhM_D08G0387.1,GhM_D13G0311.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT4G17900||AT1G32700||AT4G17890 | zinc-binding family protein||AGD8; AGD8 (ARF-GAP DOMAIN 8); ARF GTPase activator/ DNA binding / zinc ion binding | GO:0008150|biological_process;GO:0032312|regulation of ARF GTPase activity;GO:0008060|ARF GTPase activator activity;GO:0005488|binding;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0008270|zinc ion binding | GhM_A02G1670.1,GhM_D03G0598.1,GhM_A11G0343.1,GhM_A03G0062.1,GhM_D03G2041.1,GhM_A08G2074.1,GhM_D08G2026.1,GhM_A09G2432.1,GhM_D09G2314.1,GhM_D12G2511.1,GhM_A03G0067.1,GhM_D03G2036.1,GhM_A09G2429.1,GhM_D09G2311.1,GhM_A11G0339.1,GhM_D11G0325.1,GhM_A12G2623.1,GhM_D11G0330.1,GhM_A13G2113.1,GhM_D13G2002.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT5G65260||AT5G10350||AT5G51120||AT1G72480 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01070.1); Has 422 Blast hits to 420 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 101; Plants - 83; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).||polyadenylate-binding protein family protein / PABP family protein||PABN1, ATPABN1; PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0008143|poly(A) RNA binding;GO:0003676|nucleic acid binding;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A02G1701.1,GhM_D03G0420.1,GhM_A12G0167.1,GhM_A03G0831.1,GhM_D03G1272.1,GhM_A06G0245.1,GhM_A05G1558.1,GhM_D05G1572.1,GhM_A10G0622.1,GhM_D10G0593.1,GhM_D09G1909.1,GhM_D05G3237.1,GhM_D13G1550.1,GhM_D10G0594.1,GhM_A07G0562.1,GhM_A12G2484.1,GhM_D12G2368.1,GhM_A13G0811.1,GhM_D13G0577.1,GhM_D12G0174.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT1G02130||AT4G17530||AT3G11730||AT5G47200 | ATRABD2B, ATRAB1A; ATRAB1A; GTP binding||ATFP8, ATRABD1, RABD1; ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding||ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A; ARA-5 (ARABIDOPSIS RAS 5); GTP binding||RAB1C, ATRAB1C, ATRABD2C; ATRAB1C; GTP binding | GO:0005525|GTP binding;GO:0046686|response to cadmium ion;GO:0030742|GTP-dependent protein binding;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0016020|membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005773|vacuole | GhM_A02G1779.1,GhM_D11G0891.1,GhM_A03G0128.1,GhM_D03G1978.1,GhM_A03G0817.1,GhM_D03G1285.1,GhM_A08G0738.1,GhM_D08G0702.1,GhM_A08G1876.1,GhM_D11G0302.1,GhM_A08G2174.1,GhM_D08G2129.1,GhM_A11G0316.1,GhM_D02G2794.1,GhM_A03G2788.1,GhM_A11G0875.1,GhM_D12G0789.1,GhM_D08G1828.1,GhM_D12G2372.1,GhM_A12G0801.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT2G41620||AT4G04940||AT5G06950||AT1G68640||AT3G57350 | nucleoporin interacting component family protein||AHBP-1B, TGA2; AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor||transducin family protein / WD-40 repeat family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; CONTAINS InterPro DOMAIN/s: Nucleoporin interacting component Nup93/Nic96 (InterPro:IPR007231); BEST Arabidopsis thaliana protein match is: nucleoporin interacting component family protein (TAIR:AT2G41620.1); Has 234 Blast hits to 230 proteins in 99 species: Archae - 0; Bacteria - 3; Metazoa - 124; Fungi - 76; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).||PAN; PAN (PERIANTHIA); DNA binding / transcription factor | GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0006810|transport;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0009410|response to xenobiotic stimulus;GO:0005643|nuclear pore;GO:0005737|cytoplasm;GO:0006364|rRNA processing;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0003700|transcription factor activity;GO:0009909|regulation of flower development;GO:0016564|transcription repressor activity;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway | GhM_A03G1441.1,GhM_A11G3903.1,GhM_A11G2838.1,GhM_D11G3822.1,GhM_A11G2839.1,GhM_A13G0054.1,GhM_A10G2368.1,GhM_D10G2290.1,GhM_A13G0025.1,GhM_A11G3868.1,GhM_D11G3786.1,GhM_A13G0604.1,GhM_A12G2174.1,GhM_D12G2073.1,GhM_D06G0443.1,GhM_D13G0786.1,GhM_D13G0026.1,GhM_D13G0058.1,GhM_A13G0911.1,GhM_A13G0055.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT2G23950||AT4G30520||AT3G25560||AT5G16000||AT1G60800||AT5G45780 | leucine-rich repeat transmembrane protein kinase, putative||NIK3; NIK3 (NSP-INTERACTING KINASE 3); kinase||NIK2; NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase||leucine-rich repeat family protein / protein kinase family protein||NIK1; NIK1 (NSP-INTERACTING KINASE 1); kinase | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A04G0584.1,GhM_D04G1035.1,GhM_A05G0087.1,GhM_D05G0091.1,GhM_A12G2041.1,GhM_D12G1947.1,GhM_A13G1268.1,GhM_A05G3547.1,GhM_D05G3499.1,GhM_A11G1951.1,GhM_D11G1940.1,GhM_A12G2042.1,GhM_D12G1948.1,GhM_D13G1046.1,GhM_A05G3665.1,GhM_D05G3623.1,GhM_D12G1946.1,GhM_A12G2040.1,GhM_A10G0384.1,GhM_D10G0372.1 | 20 | 0 | Gossypium | Cotton | |||
| - | AT5G50430||AT1G17280||AT1G53760||AT2G02730 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: bZIP family transcription factor (TAIR:AT1G27000.1); Has 86 Blast hits to 86 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||UBC34; UBC34 (ubiquitin-conjugating enzyme 34); ubiquitin-protein ligase||UBC33; UBC33 (ubiquitin-conjugating enzyme 33); ubiquitin-protein ligase | GO:0012505|endomembrane system;GO:0051246|regulation of protein metabolic process;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0043687|post-translational protein modification;GO:0005886|plasma membrane;GO:0004842|ubiquitin-protein ligase activity;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A06G1879.1,GhM_D06G1873.1,GhM_A10G0556.1,GhM_D10G0531.1,GhM_D05G3614.1,GhM_D07G0576.1,GhM_D06G1381.1,GhM_D09G0616.1,GhM_D02G0583.1,GhM_A13G0852.1,GhM_A12G2138.1,GhM_D13G0751.1,GhM_D05G3517.1,GhM_D05G3281.1,GhM_D04G0307.1,GhM_D08G1059.1,GhM_D04G0361.1,GhM_D04G1081.1,GhM_D11G2658.1,GhM_D12G2046.1 | 20 | 0 | Gossypium | Cotton | |||
| TA327:GhM_A11G0200.1,GhM_A11G0202.1,GhM_A11G0203.1,GhM_A11G0207.1;TA2542:GhM_D11G0199.1,GhM_D11G0202.1 | AT4G10610||AT4G10640||AT1G32790||AT3G14450 | CID9; CID9 (CTC-Interacting Domain 9); RNA binding / protein binding||RBP37, ATRBP37, CID12; CID12; RNA binding||CID11; RNA-binding protein, putative||IQD16; IQD16 (IQ-domain 16); calmodulin binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0005516|calmodulin binding;GO:0005575|cellular_component | GhM_A01G0388.1,GhM_A04G0528.1,GhM_A05G4938.1,GhM_A08G1467.1,GhM_A08G1524.1,GhM_A11G0180.1,GhM_D08G1286.1,GhM_D08G1390.1,GhM_D11G0178.1,GhM_D08G1331.1,GhM_D04G0008.1,GhM_A11G3690.1,GhM_D01G0374.1,GhM_D11G3611.1 | 20 | 2 | Gossypium | Cotton | |||
| TA5:GhM_A11G3972.1,GhM_A11G3975.1,GhM_A11G3976.1,GhM_A11G3978.1,GhM_A11G3981.1,GhM_A11G3982.1,GhM_A11G3986.1,GhM_A11G3990.1,GhM_A11G3991.1,GhM_A11G3992.1,GhM_A11G3993.1,GhM_A11G3994.1,GhM_A11G3995.1,GhM_A11G3996.1,GhM_A11G4003.1,GhM_A11G4004.1,GhM_A11G4005.1,GhM_A11G4006.1;TA2670:GhM_D11G3886.1,GhM_D11G3888.1 | AT3G14470||AT3G11670||AT3G14460||AT3G50950 | disease resistance protein (CC-NBS-LRR class), putative||DGD1; DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); UDP-galactosyltransferase/ galactolipid galactosyltransferase/ transferase, transferring glycosyl groups||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component;GO:0046480|galactolipid galactosyltransferase activity;GO:0035250|UDP-galactosyltransferase activity;GO:0005739|mitochondrion;GO:0006915|apoptosis;GO:0006869|lipid transport;GO:0006952|defense response;GO:0019375|galactolipid biosynthetic process;GO:0042550|photosystem I stabilization;GO:0009707|chloroplast outer membrane;GO:0005524|ATP binding | - | 20 | 2 | Gossypium | Cotton | |||
| TA648:GhM_D01G0550.1,GhM_D01G0569.1,GhM_D01G0570.1;TA3539:GhM_A09G1067.1,GhM_A09G1068.1 | AT1G78870||AT3G57030||AT1G60970||AT1G16890||AT4G08520 | UBC35, UBC13A; UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase||strictosidine synthase family protein||clathrin adaptor complex small chain family protein||UBC36, UBC13B; ubiquitin-conjugating enzyme, putative | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0016192|vesicle-mediated transport;GO:0046686|response to cadmium ion;GO:0016844|strictosidine synthase activity;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum;GO:0010053|root epidermal cell differentiation;GO:0009821|alkaloid biosynthetic process;GO:0009058|biosynthetic process;GO:0004842|ubiquitin-protein ligase activity;GO:0031372|UBC13-MMS2 complex;GO:0009505|plant-type cell wall;GO:0010039|response to iron ion;GO:0005515|protein binding;GO:0030117|membrane coat;GO:0006301|postreplication repair;GO:0006810|transport;GO:0030125|clathrin vesicle coat | GhM_A01G0430.1,GhM_A01G0585.1,GhM_A04G0420.1,GhM_A11G3642.1,GhM_A13G2000.1,GhM_D01G0421.1,GhM_D13G1900.1,GhM_D05G3953.1,GhM_D11G3550.1,GhM_A06G2475.1,GhM_A06G2538.1,GhM_A08G2000.1,GhM_D09G1005.1,GhM_D06G2531.1,GhM_D08G1947.1 | 20 | 2 | Gossypium | Cotton | |||
| TA104:GhM_D01G0464.1,GhM_D01G0466.1,GhM_D01G0467.1,GhM_D01G0468.1,GhM_D01G0471.1,GhM_D01G0472.1,GhM_D01G0473.1;TA154:GhM_A01G0476.1,GhM_A01G0479.1,GhM_A01G0480.1,GhM_A01G0481.1,GhM_A01G0483.1,GhM_A01G0486.1;TA397:GhM_A01G0477.1,GhM_A01G0484.1,GhM_A01G0485.1,GhM_A01G0487.1 | AT4G26090||AT4G27190||AT4G38200||AT1G12220 | guanine nucleotide exchange family protein||RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding||RPS2; RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding||disease resistance protein (NBS-LRR class), putative | GO:0005086|ARF guanyl-nucleotide exchange factor activity;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0006915|apoptosis;GO:0005085|guanyl-nucleotide exchange factor activity;GO:0032012|regulation of ARF protein signal transduction;GO:0016045|detection of bacterium;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0005488|binding;GO:0005622|intracellular;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A01G0482.1,GhM_D06G0825.1,GhM_A06G0820.1 | 20 | 3 | Gossypium | Cotton | |||
| TA102:GhM_A10G2441.1,GhM_A10G2442.1,GhM_A10G2443.1,GhM_A10G2444.1,GhM_A10G2445.1,GhM_A10G2446.1,GhM_A10G2447.1;TA964:GhM_A02G2024.1,GhM_A02G2025.1,GhM_A02G2027.1;TA679:GhM_D03G0239.1,GhM_D03G0242.1,GhM_D03G0243.1;TA266:GhM_D10G2369.1,GhM_D10G2371.1,GhM_D10G2373.1,GhM_D10G2374.1,GhM_D10G2376.1 | AT4G31500||AT3G26310||AT3G26300||AT3G26210||AT3G26220 | CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B35; CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP83B1, SUR2, RNT1, RED1, ATR4; CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding||CYP71B3; CYP71B3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005886|plasma membrane;GO:0009682|induced systemic resistance;GO:0005783|endoplasmic reticulum;GO:0048830|adventitious root development;GO:0009759|indole glucosinolate biosynthetic process;GO:0005739|mitochondrion;GO:0009641|shade avoidance;GO:0016020|membrane;GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;GO:0010114|response to red light;GO:0005506|iron ion binding;GO:0009684|indoleacetic acid biosynthetic process;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity;GO:0012505|endomembrane system;GO:0052544|callose deposition in cell wall during defense response;GO:0000162|tryptophan biosynthetic process;GO:0019825|oxygen binding;GO:0042742|defense response to bacterium | GhM_A05G2101.1,GhM_D05G2122.1 | 20 | 4 | Gossypium | Cotton | |||
| TA421:GhM_D08G2505.1,GhM_D08G2508.1,GhM_D08G2509.1,GhM_D08G2510.1;TA1102:GhM_A08G2570.1,GhM_A08G2571.1,GhM_A08G2572.1;TA971:GhM_A03G0984.1,GhM_A03G0989.1,GhM_A03G0991.1;TA682:GhM_D03G1218.1,GhM_D03G1219.1,GhM_D03G1220.1 | AT5G48670||AT1G65300 | FEM111, AGL80; AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor||PHE2, AGL38; AGL38 (AGAMOUS-LIKE 38); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_D08G3149.1,GhM_A03G0987.1,GhM_A03G0992.1,GhM_D10G1983.1,GhM_D13G1709.1,GhM_D08G2507.1,GhM_A10G2044.1 | 20 | 4 | Gossypium | Cotton | |||
| TA111:GhM_D04G0447.1,GhM_D04G0448.1,GhM_D04G0449.1,GhM_D04G0450.1,GhM_D04G0451.1,GhM_D04G0452.1,GhM_D04G0453.1;TA182:GhM_A05G4498.1,GhM_A05G4499.1,GhM_A05G4500.1,GhM_A05G4501.1,GhM_A05G4502.1,GhM_A05G4503.1;TA1134:GhM_A10G0340.1,GhM_A10G0341.1;TA3158:GhM_A05G1755.1,GhM_A05G1756.1;TA1915:GhM_D05G1765.1,GhM_D05G1766.1 | AT5G45890 | SAG12; SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase | GO:0010282|senescence associated vacuole;GO:0010150|leaf senescence;GO:0009817|defense response to fungus, incompatible interaction;GO:0006508|proteolysis;GO:0009723|response to ethylene stimulus;GO:0007568|aging | GhM_D10G0328.1 | 20 | 5 | Gossypium | Cotton | |||
| TA211:GhM_A12G1159.1,GhM_A12G1161.1,GhM_A12G1162.1,GhM_A12G1164.1,GhM_A12G1165.1;TA960:GhM_A02G1897.1,GhM_A02G1899.1,GhM_A02G1900.1;TA909:GhM_D12G0900.1,GhM_D12G0901.1,GhM_D12G0902.1;TA332:GhM_A11G2454.1,GhM_A11G2456.1,GhM_A11G2459.1,GhM_A11G2460.1;TA2612:GhM_D11G2428.1,GhM_D11G2429.1 | AT4G37990||AT4G39330||AT4G37980||AT4G37970 | ELI3-1, ELI3, ATCAD7, CAD7; ELI3-1 (ELICITOR-ACTIVATED GENE 3-1); binding / catalytic/ oxidoreductase/ zinc ion binding||ELI3-2, ELI3, ATCAD8, CAD-B2; ELI3-2 (ELICITOR-ACTIVATED GENE 3-2); aryl-alcohol dehydrogenase/ mannitol dehydrogenase||ATCAD9, CAD9; CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9); binding / catalytic/ oxidoreductase/ zinc ion binding||ATCAD6, CAD6; CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6); binding / catalytic/ oxidoreductase/ zinc ion binding | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0009617|response to bacterium;GO:0009626|plant-type hypersensitive response;GO:0048046|apoplast;GO:0016491|oxidoreductase activity;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0018456|aryl-alcohol dehydrogenase activity | GhM_D03G0366.1,GhM_D11G3495.1,GhM_Scaf005G092.1 | 20 | 5 | Gossypium | Cotton | |||
| TA148:GhM_D05G2270.1,GhM_D05G2271.1,GhM_D05G2272.1,GhM_D05G2273.1,GhM_D05G2274.1,GhM_D05G2275.1;TA179:GhM_A05G2251.1,GhM_A05G2252.1,GhM_A05G2254.1,GhM_A05G2255.1,GhM_A05G2256.1,GhM_A05G2257.1;TA3262:GhM_A06G0169.1,GhM_A06G0170.1;TA2008:GhM_D06G0174.1,GhM_D06G0175.1;TA2996:GhM_A03G1111.1,GhM_A03G1112.1;TA1681:GhM_D02G1019.1,GhM_D02G1020.1 | AT2G26560 | PLP2, PLA IIA, PLA2A; PLA2A (PHOSPHOLIPASE A 2A); lipase/ nutrient reservoir | GO:0051607|defense response to virus;GO:0031408|oxylipin biosynthetic process;GO:0046686|response to cadmium ion;GO:0005737|cytoplasm;GO:0009626|plant-type hypersensitive response;GO:0006629|lipid metabolic process;GO:0045735|nutrient reservoir activity;GO:0008219|cell death;GO:0016020|membrane;GO:0016298|lipase activity | - | 20 | 6 | Gossypium | Cotton | |||
| - | AT1G16300||AT3G04120||AT1G13440||AT1G79530 | GAPCP-2; GAPCP-2; NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase||GAPC-2, GAPC2; GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase||GAPC, GAPC-1, GAPC1; GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1); glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase||GAPCP-1; GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | GO:0003824|catalytic activity;GO:0005740|mitochondrial envelope;GO:0042542|response to hydrogen peroxide;GO:0005975|carbohydrate metabolic process;GO:0046686|response to cadmium ion;GO:0048316|seed development;GO:0051287|NAD or NADH binding;GO:0005886|plasma membrane;GO:0006950|response to stress;GO:0006979|response to oxidative stress;GO:0009744|response to sucrose stimulus;GO:0005739|mitochondrion;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0016020|membrane;GO:0006094|gluconeogenesis;GO:0048658|tapetal layer development;GO:0008943|glyceraldehyde-3-phosphate dehydrogenase activity;GO:0004365|glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity;GO:0048046|apoplast;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0008270|zinc ion binding;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0009555|pollen development;GO:0005488|binding;GO:0009536|plastid;GO:0005634|nucleus;GO:0010154|fruit development;GO:0042742|defense response to bacterium;GO:0006096|glycolysis | GhM_A01G1070.1,GhM_D11G3627.1,GhM_A05G4049.1,GhM_A01G1932.1,GhM_D01G1983.1,GhM_A03G1741.1,GhM_D02G1825.1,GhM_A07G2899.1,GhM_D07G2802.1,GhM_A09G0457.1,GhM_D09G0417.1,GhM_A11G0446.1,GhM_D04G0938.1,GhM_A11G0756.1,GhM_D11G0768.1,GhM_A11G3702.1,GhM_D13G1597.1,GhM_A13G1719.1,GhM_D11G0427.1 | 19 | 0 | Gossypium | Cotton | |||
| - | AT4G07960||AT4G31590||AT3G07330||AT3G28180 | ATCSLC12, CSLC12; ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12); cellulose synthase/ transferase, transferring glycosyl groups||ATCSLC04, CSLC04, ATCSLC4, CSLC4; ATCSLC04 (CELLULOSE-SYNTHASE LIKE C4); cellulose synthase/ transferase, transferring glycosyl groups||ATCSLC06, CSLC06, ATCSLC6; ATCSLC6 (CELLULOSE-SYNTHASE LIKE C6); cellulose synthase/ transferase, transferring glycosyl groups||ATCSLC05, CSLC05, ATCSLC5; ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/ transferase, transferring glycosyl groups | GO:0008150|biological_process;GO:0005634|nucleus;GO:0016759|cellulose synthase activity;GO:0005794|Golgi apparatus;GO:0048868|pollen tube development;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A02G0961.1,GhM_D02G0955.1,GhM_A05G2386.1,GhM_D05G2399.1,GhM_A05G2954.1,GhM_D05G2963.1,GhM_A06G0279.1,GhM_D06G0280.1,GhM_A06G1292.1,GhM_A05G0687.1,GhM_D05G0707.1,GhM_A06G1291.1,GhM_D06G1301.1,GhM_A07G0436.1,GhM_D07G0433.1,GhM_A07G1985.1,GhM_D07G1933.1,GhM_A09G0330.1,GhM_D09G0304.1 | 19 | 0 | Gossypium | Cotton | |||
| - | AT3G30380||AT3G01690||AT4G24760||AT5G38220||AT4G31020 | unknown protein||INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 3127 Blast hits to 3124 proteins in 513 species: Archae - 3; Bacteria - 775; Metazoa - 627; Fungi - 135; Plants - 158; Viruses - 6; Other Eukaryotes - 1423 (source: NCBI BLink).||EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14390.1); Has 2954 Blast hits to 2948 proteins in 496 species: Archae - 2; Bacteria - 741; Metazoa - 618; Fungi - 134; Plants - 170; Viruses - 6; Other Eukaryotes - 1283 (source: NCBI BLink).||hydrolase | GO:0008150|biological_process;;GO:0016787|hydrolase activity;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component | GhM_A03G1434.1,GhM_D02G1556.1,GhM_A05G4241.1,GhM_D04G0695.1,GhM_A07G0671.1,GhM_D07G0663.1,GhM_A09G2981.1,GhM_A07G2237.1,GhM_D07G2170.1,GhM_A11G1927.1,GhM_D11G1911.1,GhM_D09G2840.1,GhM_D13G1103.1,GhM_A05G0555.1,GhM_D05G0578.1,GhM_A06G1163.1,GhM_D06G1192.1,GhM_A07G0333.1,GhM_D07G0332.1 | 19 | 0 | Gossypium | Cotton | |||
| - | AT5G57330||AT3G01590||AT3G61610||AT4G23730 | aldose 1-epimerase family protein | GO:0004034|aldose 1-epimerase activity;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0006499|N-terminal protein myristoylation;GO:0006012|galactose metabolic process;GO:0030246|carbohydrate binding;GO:0016853|isomerase activity;GO:0005575|cellular_component | GhM_A04G0943.1,GhM_A06G1938.1,GhM_A06G1025.1,GhM_D06G1865.1,GhM_A05G1602.1,GhM_D05G1617.1,GhM_A08G0270.1,GhM_A05G0038.1,GhM_D08G0260.1,GhM_A10G0543.1,GhM_D10G0517.1,GhM_D04G0677.1,GhM_A05G4261.1,GhM_D11G1104.1,GhM_A08G1376.1,GhM_D08G1476.1,GhM_A11G1091.1,GhM_D12G2786.1,GhM_A12G2896.1 | 19 | 0 | Gossypium | Cotton | |||
| - | AT5G17310||AT3G03250 | UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative||UGP; UGP (UDP-glucose pyrophosphorylase); UTP:glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase | GO:0005985|sucrose metabolic process;GO:0008152|metabolic process;GO:0046686|response to cadmium ion;GO:0016779|nucleotidyltransferase activity;GO:0009651|response to salt stress;GO:0003983|UTP:glucose-1-phosphate uridylyltransferase activity;GO:0005886|plasma membrane;GO:0016036|cellular response to phosphate starvation | GhM_A11G2800.1,GhM_D11G2756.1,GhM_D08G0972.1,GhM_D01G1595.1,GhM_D01G1644.1,GhM_D08G1382.1,GhM_D06G1217.1,GhM_D01G2365.1,GhM_D09G0164.1,GhM_D12G1138.1,GhM_D12G2106.1,GhM_D10G2633.1,GhM_D11G2651.1,GhM_D04G0358.1,GhM_D11G2652.1,GhM_D12G0760.1,GhM_D04G0590.1,GhM_D07G0327.1,GhM_D09G0277.1 | 19 | 0 | Gossypium | Cotton | |||
| TA1995:GhM_D05G4253.1,GhM_D05G4260.1;TA3044:GhM_A04G0143.1,GhM_A04G0144.1 | AT2G05710||AT4G35830 | aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)||aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative | GO:0005507|copper ion binding;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0009737|response to abscisic acid stimulus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0003994|aconitate hydratase activity;GO:0005524|ATP binding;GO:0005773|vacuole | GhM_A02G2213.1,GhM_A03G1454.1,GhM_A01G0863.1,GhM_D05G3504.1,GhM_A05G3550.1,GhM_A12G2033.1,GhM_D12G1941.1,GhM_A12G0666.1,GhM_D12G0666.1,GhM_D02G1574.1,GhM_D03G0057.1,GhM_A05G3577.1,GhM_A06G0696.1,GhM_A06G0697.1,GhM_D02G0831.1 | 19 | 2 | Gossypium | Cotton | |||
| TA2319:GhM_D08G1443.1,GhM_D08G1444.1;TA2954:GhM_A03G0005.1,GhM_A03G0007.1 | ATCG00270 | PSBD; PSII D2 protein | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A01G0011.1,GhM_A01G1541.1,GhM_A01G1970.1,GhM_Scaf003G071.1,GhM_Scaf232G356.1,GhM_A05G3792.1,GhM_Scaf001G013.1,GhM_A12G1586.1,GhM_A06G1344.1,GhM_Scaf019G133.1,GhM_A11G2717.1,GhM_Scaf001G051.1,GhM_A03G1572.1,GhM_D05G3503.1,GhM_D12G0992.1 | 19 | 2 | Gossypium | Cotton | |||
| TA2419:GhM_D09G1863.1,GhM_D09G1866.1;TA3568:GhM_A09G1967.1,GhM_A09G1968.1 | AT3G53610||AT5G59840||AT3G46060 | Ras-related GTP-binding family protein||ARA3, ARA-3, ATRABE1C, ATRAB8A; ATRAB8A; GTP binding||ATRAB8, AtRab8B, AtRABE1a; ATRAB8; GTP binding | GO:0009873|ethylene mediated signaling pathway;GO:0005525|GTP binding;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005773|vacuole | GhM_A01G2711.1,GhM_A04G1051.1,GhM_A05G1073.1,GhM_A05G4111.1,GhM_D04G1506.1,GhM_D01G2641.1,GhM_D10G2670.1,GhM_D13G2828.1,GhM_D05G1087.1,GhM_D13G1081.1,GhM_A13G2928.1,GhM_A13G1200.1,GhM_A13G0243.1,GhM_D13G0227.1,GhM_A10G2733.1 | 19 | 2 | Gossypium | Cotton | |||
| TA56:GhM_A01G0948.1,GhM_A01G0949.1,GhM_A01G0950.1,GhM_A01G0952.1,GhM_A01G0953.1,GhM_A01G0954.1,GhM_A01G0956.1,GhM_A01G0957.1,GhM_A01G0958.1;TA106:GhM_D01G0905.1,GhM_D01G0907.1,GhM_D01G0909.1,GhM_D01G0913.1,GhM_D01G0914.1,GhM_D01G0915.1,GhM_D01G0916.1 | AT3G26310||AT3G26300||AT5G25180||AT4G20235||AT3G26320||AT3G26230||AT5G25120||AT2G30750 | CYP71B11; CYP71B11; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B36; CYP71B36; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B14; CYP71B14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B24; CYP71B24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B35; CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A28; CYP71A28; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP71A12; CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0020037|heme binding;GO:0009617|response to bacterium;GO:0005506|iron ion binding;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_Scaf030G157.1,GhM_Scaf029G154.1,GhM_Scaf030G156.1 | 19 | 2 | Gossypium | Cotton | |||
| TA2053:GhM_D06G1775.1,GhM_D06G1777.1;TA3053:GhM_A04G0248.1,GhM_A04G0251.1;TA2253:GhM_D07G2015.1,GhM_D07G2019.1 | AT2G34420||AT1G29930||AT5G54270||AT2G05070||AT3G27690||AT2G34430 | LHB1B2, LHCB1.5; LHB1B2; chlorophyll binding||LHCB2.2, LHCB2; LHCB2.2; chlorophyll binding||LHB1B1, LHCB1.4; LHB1B1; chlorophyll binding||CAB1, AB140, CAB140, LHCB1.3; CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding||LHCB3, LHCB3*1; LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule||LHCB2.4, LHCB2.3, LHCB2; LHCB2.3; chlorophyll binding | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016168|chlorophyll binding;GO:0010114|response to red light;GO:0010218|response to far red light;GO:0009579|thylakoid;GO:0030076|light-harvesting complex;GO:0010287|plastoglobule;GO:0009637|response to blue light;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0009765|photosynthesis, light harvesting;GO:0015979|photosynthesis | GhM_A01G0731.1,GhM_D05G4139.1,GhM_D01G0697.1,GhM_A05G1682.1,GhM_A06G2533.1,GhM_A07G2116.1,GhM_A07G2219.1,GhM_A07G2466.1,GhM_A10G0417.1,GhM_D05G1690.1,GhM_D07G2367.1,GhM_D10G0408.1,GhM_D06G1776.1 | 19 | 3 | Gossypium | Cotton | |||
| TA373:GhM_D03G0575.1,GhM_D03G0578.1,GhM_D03G0579.1,GhM_D03G0589.1;TA2923:GhM_A02G1681.1,GhM_A02G1689.1;TA2238:GhM_D07G1464.1,GhM_D07G1465.1 | AT5G19440||AT2G23910||AT1G51410 | cinnamoyl-CoA reductase-related||cinnamyl-alcohol dehydrogenase, putative (CAD) | GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0016621|cinnamoyl-CoA reductase activity;GO:0044237|cellular metabolic process;GO:0009809|lignin biosynthetic process;GO:0050662|coenzyme binding;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A01G1937.1,GhM_A03G1250.1,GhM_A04G1835.1,GhM_A10G1523.1,GhM_A05G0763.1,GhM_A07G1496.1,GhM_D05G0786.1,GhM_A09G1459.1,GhM_D09G1363.1,GhM_A11G0852.1,GhM_D11G0869.1 | 19 | 3 | Gossypium | Cotton | |||
| TA90:GhM_A02G0114.1,GhM_A02G0116.1,GhM_A02G0118.1,GhM_A02G0119.1,GhM_A02G0120.1,GhM_A02G0121.1,GhM_A02G0122.1,GhM_A02G0123.1;TA108:GhM_D02G0116.1,GhM_D02G0117.1,GhM_D02G0119.1,GhM_D02G0122.1,GhM_D02G0123.1,GhM_D02G0127.1,GhM_D02G0128.1;TA1639:GhM_D02G0120.1,GhM_D02G0125.1 | AT3G42170||AT2G15690||AT4G30700||AT4G35130||AT4G33620||AT2G01570||AT5G17490||AT2G03380 | RGA1, RGA; RGA1 (REPRESSOR OF GA1-3 1); protein binding / transcription factor||RGL3; RGL3 (RGA-LIKE PROTEIN 3); transcription factor||pentatricopeptide (PPR) repeat-containing protein||Ulp1 protease family protein||DNA binding | GO:0009739|response to gibberellin stimulus;GO:0045449|regulation of transcription;GO:0009740|gibberellic acid mediated signaling pathway;GO:0003677|DNA binding;GO:0006508|proteolysis;GO:0009723|response to ethylene stimulus;GO:0009867|jasmonic acid mediated signaling pathway;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0042176|regulation of protein catabolic process;GO:0010218|response to far red light;GO:0010162|seed dormancy;GO:0010187|negative regulation of seed germination;GO:0009938|negative regulation of gibberellic acid mediated signaling pathway;GO:0009737|response to abscisic acid stimulus;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0042538|hyperosmotic salinity response;GO:0009791|post-embryonic development;GO:0009845|seed germination;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005634|nucleus | GhM_D02G0248.1,GhM_A02G0117.1 | 19 | 3 | Gossypium | Cotton | |||
| TA124:GhM_A04G0214.1,GhM_A04G0219.1,GhM_A04G0222.1,GhM_A04G0223.1,GhM_A04G0224.1,GhM_A04G0226.1,GhM_A04G0227.1;TA746:GhM_D05G4160.1,GhM_D05G4162.1,GhM_D05G4163.1;TA2125:GhM_A01G0771.1,GhM_A01G0774.1;TA794:GhM_A01G2498.1,GhM_A01G2499.1,GhM_A01G2500.1 | AT2G24210||AT5G23960||AT4G16730||AT3G14520||AT1G48800 | lyase/ magnesium ion binding||ATTPS21, TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase||TPS10; TPS10 (terpene synthase 10); (E)-beta-ocimene synthase/ myrcene synthase||terpene synthase/cyclase family protein | GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0016106|sesquiterpenoid biosynthetic process;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus;GO:0016829|lyase activity;GO:0051762|sesquiterpene biosynthetic process;GO:0016099|monoterpenoid biosynthetic process;GO:0050551|myrcene synthase activity;GO:0005575|cellular_component | GhM_D01G0735.1,GhM_A01G0772.1,GhM_D01G2437.1,GhM_A04G0215.1 | 19 | 4 | Gossypium | Cotton | |||
| TA377:GhM_D04G0813.1,GhM_D04G0814.1,GhM_D04G0818.1,GhM_D04G0819.1;TA502:GhM_A05G3904.1,GhM_A05G3908.1,GhM_A05G3910.1,GhM_A05G3912.1;TA1459:GhM_A13G0177.1,GhM_A13G0183.1;TA2771:GhM_D13G0166.1,GhM_D13G0172.1;TA2064:GhM_D06G2100.1,GhM_D06G2101.1 | AT3G55990||AT2G40160||AT2G40320 | unknown protein||ESK1; ESK1 (ESKIMO 1)||INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, hypocotyl, root, leaf; EXPRESSED DURING: LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: ESK1 (ESKIMO 1) (TAIR:AT3G55990.1); Has 710 Blast hits to 697 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 710; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0050826|response to freezing;GO:0045941|positive regulation of transcription;GO:0005575|cellular_component;GO:0009409|response to cold | GhM_A04G1207.1,GhM_A06G2121.1,GhM_A10G2988.1,GhM_D10G2940.1,GhM_D04G1688.1 | 19 | 5 | Gossypium | Cotton | |||
| TA68:GhM_A11G2903.1,GhM_A11G2905.1,GhM_A11G2911.1,GhM_A11G2913.1,GhM_A11G2915.1,GhM_A11G2918.1,GhM_A11G2920.1,GhM_A11G2921.1;TA2622:GhM_D11G2860.1,GhM_D11G2861.1;TA582:GhM_A11G2904.1,GhM_A11G2906.1,GhM_A11G2907.1;TA1522:GhM_A13G2197.1,GhM_A13G2198.1;TA469:GhM_D13G2083.1,GhM_D13G2084.1,GhM_D13G2085.1,GhM_D13G2086.1 | AT1G55850 | ATCSLE1, CSLE1; ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups | GO:0016759|cellulose synthase activity;GO:0030244|cellulose biosynthetic process;GO:0000271|polysaccharide biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005783|endoplasmic reticulum | - | 19 | 5 | Gossypium | Cotton | |||
| TA704:GhM_D04G1361.1,GhM_D04G1364.1,GhM_D04G1365.1;TA999:GhM_A04G0908.1,GhM_A04G0909.1,GhM_A04G0911.1;TA3564:GhM_A09G1810.1,GhM_A09G1811.1;TA2414:GhM_D09G1700.1,GhM_D09G1702.1;TA3466:GhM_A08G1951.1,GhM_A08G1954.1 | AT2G36790||AT2G36760||AT3G53150||AT2G36780||AT2G36800||AT2G36750 | UGT73C1; UGT73C1 (UDP-GLUCOSYL TRANSFERASE 73C1); UDP-glucosyltransferase/ UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein||DOGT1, UGT73C5; DOGT1 (DON-GLUCOSYLTRANSFERASE 1); UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transf||UGT73D1; UGT73D1 (UDP-glucosyl transferase 73D1); UDP-glycosyltransferase/ transferase, transferring hexosyl groups||UGT73C6; UGT73C6 (UDP-glucosyl transferase 73C6); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT73C2; UGT73C2 (UDP-glucosyl transferase 73C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0012505|endomembrane system;GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity;GO:0010224|response to UV-B;GO:0008152|metabolic process;GO:0046527|glucosyltransferase activity;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0051555|flavonol biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016131|brassinosteroid metabolic process;GO:0005575|cellular_component | GhM_D04G1362.1,GhM_D01G1615.1,GhM_A01G0838.1,GhM_D08G1897.1,GhM_D01G1029.1,GhM_D01G0801.1,GhM_A08G1952.1 | 19 | 5 | Gossypium | Cotton | |||
| TA1876:GhM_D05G0297.1,GhM_D05G0300.1;TA3118:GhM_A05G0286.1,GhM_A05G0287.1;TA2029:GhM_D06G0813.1,GhM_D06G0814.1;TA3287:GhM_A06G0809.1,GhM_A06G0811.1;TA2360:GhM_D08G3055.1,GhM_D08G3056.1;TA3502:GhM_A08G3129.1,GhM_A08G3130.1 | AT5G56600||AT2G19770||AT2G19760||AT4G29340 | PRF5; PRF5 (PROFILIN5); actin binding / actin monomer binding||PRF4; PRF4 (PROFILIN 4); actin binding||PFN3, PRF3; PRF3 (PROFILIN 3); actin binding||PFN1, PRF1; PRF1 (PROFILIN 1); actin binding | GO:0009826|unidimensional cell growth;GO:0003785|actin monomer binding;GO:0005634|nucleus;GO:0005819|spindle;GO:0005737|cytoplasm;GO:0030036|actin cytoskeleton organization;GO:0005730|nucleolus;GO:0007010|cytoskeleton organization;GO:0009524|phragmoplast;GO:0008154|actin polymerization or depolymerization;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0015629|actin cytoskeleton;GO:0003779|actin binding | GhM_A02G1533.1,GhM_A07G0281.1,GhM_A13G2566.1,GhM_D13G2480.1,GhM_D03G0644.1,GhM_D07G0281.1,GhM_D07G0282.1 | 19 | 6 | Gossypium | Cotton | |||
| - | AT2G21050||AT2G38120||AT1G77690||AT5G01240 | LAX3; LAX3 (LIKE AUX1 3); amino acid transmembrane transporter/ auxin influx transmembrane transporter/ transporter||AUX1, WAV5, PIR1, MAP1; AUX1 (AUXIN RESISTANT 1); amino acid transmembrane transporter/ auxin binding / auxin influx transmembrane transporter/ transporter||amino acid permease, putative | GO:0009733|response to auxin stimulus;GO:0009958|positive gravitropism;GO:0009723|response to ethylene stimulus;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0009624|response to nematode;GO:0009926|auxin polar transport;GO:0005768|endosome;GO:0005794|Golgi apparatus;GO:0016020|membrane;GO:0001736|establishment of planar polarity;GO:0010328|auxin influx transmembrane transporter activity;GO:0006865|amino acid transport;GO:0048829|root cap development;GO:0010011|auxin binding;GO:0010311|lateral root formation;GO:0048765|root hair cell differentiation;GO:0012505|endomembrane system;GO:0015171|amino acid transmembrane transporter activity;GO:0009986|cell surface | GhM_A01G2075.1,GhM_D01G2041.1,GhM_A01G2796.1,GhM_D01G2720.1,GhM_A03G2639.1,GhM_D02G2658.1,GhM_A04G1167.1,GhM_D04G1640.1,GhM_A05G3888.1,GhM_D04G0799.1,GhM_A06G0496.1,GhM_D06G0508.1,GhM_A09G2027.1,GhM_D09G1929.1,GhM_A10G2939.1,GhM_D10G2900.1,GhM_A13G0196.1,GhM_D13G0186.1 | 18 | 0 | Gossypium | Cotton | |||
| - | AT3G22930||AT3G43810||AT2G27030||AT1G66410||AT3G56800 | CAM5, ACAM-2; CAM5 (CALMODULIN 5); calcium ion binding||CAM3, acam-3; CAM3 (CALMODULIN 3); calcium ion binding||CAM7; CAM7 (CALMODULIN 7); calcium ion binding||CAM4, ACAM-4; CAM4 (calmodulin 4); calcium ion binding / signal transducer||calmodulin, putative | GO:0008150|biological_process;GO:0005509|calcium ion binding;GO:0010099|regulation of photomorphogenesis;GO:0005513|detection of calcium ion;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A02G0377.1,GhM_D02G0397.1,GhM_A05G0838.1,GhM_A07G1388.1,GhM_A09G1347.1,GhM_A08G0130.1,GhM_D08G0119.1,GhM_A09G2701.1,GhM_D09G2579.1,GhM_A10G1421.1,GhM_D10G1697.1,GhM_A12G3323.1,GhM_D12G3209.1,GhM_A13G2853.1,GhM_D13G2734.1,GhM_D05G0857.1,GhM_D07G1368.1,GhM_D09G1264.1 | 18 | 0 | Gossypium | Cotton | |||
| - | AT1G22740||AT4G09720||AT1G52280||AT3G18820 | ATRABG3A; Ras-related GTP-binding protein, putative||AtRABG3d; AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding||RAB7, ATRABG3B, RAB75, RABG3B; RABG3B; GTP binding||ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B; ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding | GO:0005515|protein binding;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0005634|nucleus;GO:0006913|nucleocytoplasmic transport;GO:0006886|intracellular protein transport;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005773|vacuole | GhM_A02G0722.1,GhM_D02G0717.1,GhM_A05G2767.1,GhM_D05G2771.1,GhM_A02G1574.1,GhM_D03G0839.1,GhM_A05G3060.1,GhM_D05G3056.1,GhM_A10G0909.1,GhM_A09G1110.1,GhM_D09G1041.1,GhM_A12G0305.1,GhM_D12G0306.1,GhM_A12G1144.1,GhM_D12G1156.1,GhM_A13G0387.1,GhM_D10G0747.1,GhM_D11G3352.1 | 18 | 0 | Gossypium | Cotton | |||
| - | AT4G16520||AT1G62040 | ATG8C; ATG8C (autophagy 8c); microtubule binding||ATG8F; ATG8F (autophagy 8f); microtubule binding | GO:0008017|microtubule binding;GO:0006914|autophagy | GhM_A03G0167.1,GhM_D03G1930.1,GhM_A05G1922.1,GhM_D05G1936.1,GhM_A08G0397.1,GhM_D08G0385.1,GhM_A08G1838.1,GhM_D08G1788.1,GhM_A09G0955.1,GhM_D09G0889.1,GhM_A09G2382.1,GhM_D09G2270.1,GhM_A10G0135.1,GhM_D10G0125.1,GhM_A12G2035.1,GhM_D12G1943.1,GhM_D13G1033.1,GhM_D10G0122.1 | 18 | 0 | Gossypium | Cotton | |||
| - | AT1G62990||AT5G11060||AT5G25220 | KNAT7, IXR11; KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor||KNAT4; KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor||KNAT3; KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0009416|response to light stimulus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005829|cytosol;GO:0010089|xylem development;GO:0009722|detection of cytokinin stimulus | GhM_A03G0239.1,GhM_D03G1874.1,GhM_A05G0125.1,GhM_D05G0132.1,GhM_A05G0625.1,GhM_D05G0644.1,GhM_A06G0580.1,GhM_D06G0585.1,GhM_A06G1223.1,GhM_D06G1249.1,GhM_A13G2420.1,GhM_A07G0389.1,GhM_D07G0387.1,GhM_D13G2318.1,GhM_A08G2318.1,GhM_D08G2264.1,GhM_A12G2795.1,GhM_D12G2683.1 | 18 | 0 | Gossypium | Cotton | |||
| - | AT1G77210||AT1G62850||AT2G45660 | sugar transporter, putative||AGL20, SOC1; AGL20 (AGAMOUS-LIKE 20); transcription factor||translation release factor | GO:0006415|translational termination;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005634|nucleus;GO:0003747|translation release factor activity;GO:0055085|transmembrane transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity | GhM_A06G0778.1,GhM_D06G0779.1,GhM_A07G0053.1,GhM_D07G0089.1,GhM_D01G1200.1,GhM_D12G0671.1,GhM_D05G3306.1,GhM_D11G0814.1,GhM_D05G3627.1,GhM_D13G0963.1,GhM_D06G1615.1,GhM_D01G1834.1,GhM_D08G1422.1,GhM_D09G0605.1,GhM_D12G0943.1,GhM_D13G1006.1,GhM_D13G2253.1,GhM_D10G2024.1 | 18 | 0 | Gossypium | Cotton | |||
| TA1169:GhM_A10G1367.1,GhM_A10G1369.1;TA3062:GhM_A04G0453.1,GhM_A04G0456.1 | AT2G27040||AT5G21030 | AGO4, OCP11; AGO4 (ARGONAUTE 4); nucleic acid binding||PAZ domain-containing protein / piwi domain-containing protein | GO:0030422|production of siRNA involved in RNA interference;GO:0005719|nuclear euchromatin;GO:0015030|Cajal body;GO:0006342|chromatin silencing;GO:0006306|DNA methylation;GO:0031048|chromatin silencing by small RNA;GO:0009816|defense response to bacterium, incompatible interaction;GO:0003676|nucleic acid binding;GO:0005730|nucleolus | GhM_A02G0998.1,GhM_A03G1536.1,GhM_A04G0221.1,GhM_A01G1234.1,GhM_A03G0968.1,GhM_A12G1014.1,GhM_A07G1825.1,GhM_A11G2139.1,GhM_A08G1172.1,GhM_A09G0662.1,GhM_A04G0968.1,GhM_A08G0005.1,GhM_A13G1106.1,GhM_A13G1104.1 | 18 | 2 | Gossypium | Cotton | |||
| TA170:GhM_D13G2742.1,GhM_D13G2744.1,GhM_D13G2745.1,GhM_D13G2753.1,GhM_D13G2759.1,GhM_D13G2760.1;TA2669:GhM_D11G3877.1,GhM_D11G3881.1;TA2668:GhM_D11G3875.1,GhM_D11G3889.1 | AT5G22220||AT2G36010 | E2F1, E2FB, ATE2FB; E2F1; DNA binding / protein binding / transcription factor||E2F3, ATE2FA; E2F3 (E2F TRANSCRIPTION FACTOR 3); DNA binding / transcription factor | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0051446|positive regulation of meiotic cell cycle;GO:0005667|transcription factor complex;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010090|trichome morphogenesis;GO:0051302|regulation of cell division;GO:0005737|cytoplasm;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_D06G0489.1,GhM_D11G3878.1,GhM_A07G1347.1,GhM_D07G1326.1,GhM_D09G1223.1,GhM_A09G1289.1,GhM_A01G1605.1,GhM_D01G1571.1 | 18 | 3 | Gossypium | Cotton | |||
| TA52:GhM_D03G0197.1,GhM_D03G0198.1,GhM_D03G0199.1,GhM_D03G0201.1,GhM_D03G0202.1,GhM_D03G0203.1,GhM_D03G0204.1,GhM_D03G0205.1,GhM_D03G0206.1;TA474:GhM_A02G2056.1,GhM_A02G2061.1,GhM_A02G2063.1,GhM_A02G2064.1;TA473:GhM_A02G2055.1,GhM_A02G2057.1,GhM_A02G2060.1,GhM_A02G2062.1 | AT3G18990 | VRN1, REM39; VRN1 (REDUCED VERNALIZATION RESPONSE 1); transcription repressor | GO:0016564|transcription repressor activity;GO:0010048|vernalization response;GO:0005654|nucleoplasm | GhM_D03G0200.1 | 18 | 3 | Gossypium | Cotton | |||
| TA546:GhM_A10G1796.1,GhM_A10G1797.1,GhM_A10G1798.1;TA3215:GhM_A05G3727.1,GhM_A05G3729.1;TA1974:GhM_D05G3800.1,GhM_D05G3802.1;TA858:GhM_D10G1336.1,GhM_D10G1338.1,GhM_D10G1339.1 | AT2G43710||AT1G43800 | acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative||SSI2, FAB2; SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | GO:0009695|jasmonic acid biosynthetic process;GO:0008610|lipid biosynthetic process;GO:0009863|salicylic acid mediated signaling pathway;GO:0009507|chloroplast;GO:0051607|defense response to virus;GO:0046914|transition metal ion binding;GO:0045300|acyl-[acyl-carrier-protein] desaturase activity;GO:0006633|fatty acid biosynthetic process;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0009570|chloroplast stroma;GO:0006952|defense response;GO:0006631|fatty acid metabolic process;GO:0009867|jasmonic acid mediated signaling pathway;GO:0004768|stearoyl-CoA 9-desaturase activity;GO:0016020|membrane;GO:0042742|defense response to bacterium;GO:0016491|oxidoreductase activity | GhM_A02G1021.1,GhM_A12G0153.1,GhM_D02G1253.1,GhM_A02G1449.1,GhM_A05G3035.1,GhM_A07G1480.1,GhM_D03G0679.1,GhM_D07G1453.1 | 18 | 4 | Gossypium | Cotton | |||
| TA71:GhM_A11G3602.1,GhM_A11G3603.1,GhM_A11G3604.1,GhM_A11G3606.1,GhM_A11G3607.1,GhM_A11G3609.1,GhM_A11G3610.1,GhM_A11G3611.1;TA892:GhM_D11G3512.1,GhM_D11G3513.1,GhM_D11G3514.1;TA3058:GhM_A04G0329.1,GhM_A04G0331.1;TA237:GhM_D05G4035.1,GhM_D05G4036.1,GhM_D05G4039.1,GhM_D05G4040.1,GhM_D05G4041.1 | AT1G28130||AT5G13360||AT5G13370 | auxin-responsive GH3 family protein||GH3.17; GH3.17; indole-3-acetic acid amido synthetase | GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0010252|auxin homeostasis;GO:0005575|cellular_component;GO:0010279|indole-3-acetic acid amido synthetase activity | - | 18 | 4 | Gossypium | Cotton | |||
| TA518:GhM_A08G0465.1,GhM_A08G0466.1,GhM_A08G0467.1,GhM_A08G0468.1;TA3424:GhM_A08G0037.1,GhM_A08G0038.1;TA1478:GhM_A13G0859.1,GhM_A13G0862.1;TA819:GhM_D08G0449.1,GhM_D08G0450.1,GhM_D08G0453.1;TA1991:GhM_D05G4180.1,GhM_D05G4182.1 | AT1G60360||AT3G19910||AT1G80400||AT5G59550||AT2G17450||AT1G55530||AT3G19950 | RHA3A; RHA3A; protein binding / zinc ion binding||zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0010200|response to chitin | GhM_D08G0558.1,GhM_A08G0071.1,GhM_D08G0451.1,GhM_D13G0833.1,GhM_D13G0802.1 | 18 | 5 | Gossypium | Cotton | |||
| TA1363:GhM_A12G0470.1,GhM_A12G0472.1;TA3032:GhM_A03G2558.1,GhM_A03G2559.1;TA1712:GhM_D02G2585.1,GhM_D02G2586.1;TA1464:GhM_A13G0370.1,GhM_A13G0371.1;TA2778:GhM_D13G0354.1,GhM_D13G0355.1;TA2685:GhM_D12G0324.1,GhM_D12G0325.1 | AT4G39170||AT2G21540||AT2G21520||AT4G36490 | transporter||SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative||ATSFH12, SFH12; SFH12 (SEC14-LIKE 12); phosphatidylinositol transporter/ transporter||ATSFH3, SFH3; SFH3 (SEC14-LIKE 3); phosphatidylinositol transporter | GO:0006810|transport;GO:0008526|phosphatidylinositol transporter activity;GO:0005622|intracellular;GO:0005886|plasma membrane;GO:0005215|transporter activity | GhM_A12G0471.1,GhM_A05G2141.1,GhM_D05G2163.1,GhM_D02G1065.1,GhM_A03G1050.1,GhM_A02G2144.1 | 18 | 6 | Gossypium | Cotton | |||
| TA822:GhM_D08G0736.1,GhM_D08G0737.1,GhM_D08G0738.1;TA1088:GhM_A08G0768.1,GhM_A08G0769.1,GhM_A08G0770.1;TA3413:GhM_A07G2716.1,GhM_A07G2717.1;TA2277:GhM_D07G2614.1,GhM_D07G2615.1;TA3480:GhM_A08G2457.1,GhM_A08G2458.1;TA2342:GhM_D08G2407.1,GhM_D08G2408.1;TA1263:GhM_A11G1518.1,GhM_A11G1519.1;TA2588:GhM_D11G1506.1,GhM_D11G1507.1 | AT3G58190||AT2G42430 | LBD29, ASL16; LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)||LBD16, ASL18; LBD16 (LATERAL ORGAN BOUNDARIES-DOMAIN 16) | GO:0005634|nucleus;GO:0010311|lateral root formation | - | 18 | 8 | Gossypium | Cotton | |||
| - | AT2G14720||AT3G52850||AT2G14740||AT1G30900 | VSR-2; VSR-2; calcium ion binding||vacuolar sorting receptor, putative||ATVSR3; ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding||VSR1, BP-80, ATELP, VSR-1, BP80, BP80B, ATELP1, ATVSR1; VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1); amino-terminal vacuolar sorting propeptide binding | GO:0009940|amino-terminal vacuolar sorting propeptide binding;GO:0006896|Golgi to vacuole transport;GO:0005802|trans-Golgi network;GO:0005509|calcium ion binding;GO:0005887|integral to plasma membrane;GO:0006623|protein targeting to vacuole;GO:0007034|vacuolar transport;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0017119|Golgi transport complex;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G0089.1,GhM_D01G0102.1,GhM_A01G0090.1,GhM_A01G0122.1,GhM_D13G0493.1,GhM_A10G1886.1,GhM_A03G1130.1,GhM_D02G1224.1,GhM_A09G2616.1,GhM_D09G2497.1,GhM_D10G1257.1,GhM_A13G0503.1,GhM_D02G2432.1,GhM_D01G1109.1,GhM_A12G0556.1,GhM_D12G0547.1,GhM_A03G2413.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT3G06720||AT1G09270||AT4G02150 | AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1; IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter||IMPA-4; IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter||MOS6, ATIMPALPHA3, IMPA-3; MOS6 (MODIFIER OF SNC1, 6); binding / protein transporter | GO:0005488|binding;GO:0005643|nuclear pore;GO:0005634|nucleus;GO:0030581|symbiont intracellular protein transport in host;GO:0005737|cytoplasm;GO:0006886|intracellular protein transport;GO:0005730|nucleolus;GO:0006952|defense response;GO:0005829|cytosol;GO:0005618|cell wall;GO:0006606|protein import into nucleus;GO:0005635|nuclear envelope;GO:0008565|protein transporter activity | GhM_A01G0311.1,GhM_D01G0292.1,GhM_A02G0602.1,GhM_D02G0595.1,GhM_A08G1617.1,GhM_D08G1569.1,GhM_A11G1309.1,GhM_A08G2644.1,GhM_D08G2588.1,GhM_A13G2344.1,GhM_A09G0926.1,GhM_D09G0863.1,GhM_D13G2234.1,GhM_D11G1311.1,GhM_A12G1659.1,GhM_D12G1606.1,GhM_D07G1513.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT1G76160||AT4G22010||AT2G44270 | sks4; sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase||sks5; sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase||ATP binding | GO:0005507|copper ion binding;GO:0009505|plant-type cell wall;GO:0008033|tRNA processing;GO:0048046|apoplast;GO:0005618|cell wall;GO:0016020|membrane;GO:0005524|ATP binding;GO:0016491|oxidoreductase activity | GhM_A01G1180.1,GhM_D01G1155.1,GhM_A01G2145.1,GhM_D01G2118.1,GhM_A05G2034.1,GhM_D05G2049.1,GhM_A06G1971.1,GhM_A05G1924.1,GhM_D06G1954.1,GhM_A12G0377.1,GhM_D12G0416.1,GhM_A12G2211.1,GhM_D12G2121.1,GhM_D05G2857.1,GhM_D05G1938.1,GhM_D05G2048.1,GhM_D11G3940.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT5G04160||AT3G11320||AT5G05820 | phosphate translocator-related||organic anion transmembrane transporter | GO:0012505|endomembrane system;GO:0008514|organic anion transmembrane transporter activity | GhM_A01G1500.1,GhM_D01G1476.1,GhM_A05G3485.1,GhM_A01G2779.1,GhM_D01G2703.1,GhM_A06G2160.1,GhM_D06G2139.1,GhM_A08G0079.1,GhM_D08G0064.1,GhM_A10G2886.1,GhM_A09G1551.1,GhM_D09G1451.1,GhM_A13G0209.1,GhM_D13G0196.1,GhM_D04G0786.1,GhM_D05G3434.1,GhM_D10G2865.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT5G22510||AT1G56560||AT3G06500 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005982|starch metabolic process;GO:0003824|catalytic activity;GO:0048825|cotyledon development;GO:0004564|beta-fructofuranosidase activity | GhM_A01G1508.1,GhM_D01G1466.1,GhM_A05G4707.1,GhM_D04G0233.1,GhM_A08G2640.1,GhM_D08G2584.1,GhM_A10G2207.1,GhM_D10G2137.1,GhM_A10G2208.1,GhM_A13G1552.1,GhM_A11G3442.1,GhM_D11G3354.1,GhM_A13G2356.1,GhM_A09G1251.1,GhM_D09G1180.1,GhM_D13G2257.1,GhM_D13G1432.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT5G03530||AT1G43900||AT1G43890 | ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, RABC2A; RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding||protein phosphatase 2C, putative / PP2C, putative||ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1; ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding | GO:0005777|peroxisome;GO:0005525|GTP binding;GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0004722|protein serine/threonine phosphatase activity;GO:0008287|protein serine/threonine phosphatase complex;GO:0006355|regulation of transcription, DNA-dependent;GO:0030742|GTP-dependent protein binding;GO:0005886|plasma membrane;GO:0015031|protein transport | GhM_A01G1705.1,GhM_D01G1622.1,GhM_A02G0802.1,GhM_D02G0795.1,GhM_D02G0794.1,GhM_A05G4578.1,GhM_D04G0372.1,GhM_A10G1965.1,GhM_D10G1185.1,GhM_D04G1377.1,GhM_A04G0924.1,GhM_A09G1815.1,GhM_D09G1708.1,GhM_A10G2550.1,GhM_D10G2464.1,GhM_A11G4060.1,GhM_D11G3957.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT1G68070||AT1G12760||AT4G11680||AT3G61180 | protein binding / ubiquitin-protein ligase/ zinc ion binding||zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004842|ubiquitin-protein ligase activity;GO:0005886|plasma membrane;GO:0008270|zinc ion binding | GhM_A01G1842.1,GhM_D01G1772.1,GhM_A03G1594.1,GhM_D02G1659.1,GhM_A05G3579.1,GhM_D05G3540.1,GhM_A11G0994.1,GhM_A03G0269.1,GhM_D03G1848.1,GhM_A08G2344.1,GhM_D08G2291.1,GhM_A11G0240.1,GhM_D11G0233.1,GhM_A12G2811.1,GhM_D12G2700.1,GhM_D11G1006.1,GhM_A11G0993.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT4G38430||AT5G02010||AT5G05940 | ATROPGEF7, ROPGEF7; ROPGEF7; Rho guanyl-nucleotide exchange factor||ATROPGEF5, ROPGEF5; ROPGEF5 (ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5); Rho guanyl-nucleotide exchange factor||ATROPGEF1, ROPGEF1; ROPGEF1; Rho guanyl-nucleotide exchange factor/ protein binding | GO:0005089|Rho guanyl-nucleotide exchange factor activity;GO:0005515|protein binding;GO:0009860|pollen tube growth;GO:0008150|biological_process;GO:0016324|apical plasma membrane;GO:0005575|cellular_component | GhM_A01G2142.1,GhM_D01G2115.1,GhM_A03G2669.1,GhM_D02G2689.1,GhM_A11G2362.1,GhM_A09G1994.1,GhM_A04G1123.1,GhM_D04G1591.1,GhM_A11G2363.1,GhM_D09G1895.1,GhM_D01G2689.1,GhM_A01G2763.1,GhM_D01G2690.1,GhM_D10G2836.1,GhM_A06G2164.1,GhM_D06G2142.1,GhM_A10G2869.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT1G09840||AT4G18710||AT4G00720||AT5G26751 | BIN2, DWF12, UCU1, ATSK21, SK21; BIN2 (BRASSINOSTEROID-INSENSITIVE 2); glycogen synthase kinase 3/ kinase/ protein kinase||ATSK32; ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||ATSK41; ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase||ATSK11, SK 11; ATSK11; protein kinase/ protein serine/threonine kinase | GO:0009933|meristem structural organization;GO:0009965|leaf morphogenesis;GO:0004672|protein kinase activity;GO:0009825|multidimensional cell growth;GO:0009742|brassinosteroid mediated signaling pathway;GO:0046827|positive regulation of protein export from nucleus;GO:0009729|detection of brassinosteroid stimulus;GO:0009733|response to auxin stimulus;GO:0005634|nucleus;GO:0009741|response to brassinosteroid stimulus;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0016310|phosphorylation;GO:0004696|glycogen synthase kinase 3 activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2313.1,GhM_D01G2269.1,GhM_A06G2555.1,GhM_D06G2548.1,GhM_A08G0425.1,GhM_A11G0991.1,GhM_A08G1763.1,GhM_D08G1716.1,GhM_A09G1022.1,GhM_D09G0956.1,GhM_A11G3446.1,GhM_D11G3359.1,GhM_A12G0490.1,GhM_D12G0486.1,GhM_A12G1594.1,GhM_D12G1541.1,GhM_D11G1005.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT3G62560||AT4G02080||AT1G56330 | GTP-binding protein, putative||ASAR1, ATSARA1C, ATSAR2; ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding||SAR1, ATSAR1, ATSARA1B, ATSAR1B; ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding | GO:0012505|endomembrane system;GO:0005525|GTP binding;GO:0000300|peripheral to membrane of membrane fraction;GO:0006886|intracellular protein transport;GO:0005622|intracellular;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005783|endoplasmic reticulum | GhM_A02G0607.1,GhM_D02G0600.1,GhM_A08G0516.1,GhM_D08G0494.1,GhM_A08G1626.1,GhM_D08G1580.1,GhM_A08G2659.1,GhM_D08G2603.1,GhM_A10G2153.1,GhM_D10G2089.1,GhM_A11G3406.1,GhM_D11G3319.1,GhM_A12G1639.1,GhM_D12G1585.1,GhM_D04G0311.1,GhM_D12G1384.1,GhM_D13G1416.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT4G08180||AT4G22540||AT2G31020||AT1G13170 | ORP1D; ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D); oxysterol binding||ORP2A; ORP2A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A); oxysterol binding / phosphoinositide binding||ORP1A; ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A); oxysterol binding||ORP1C; ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C); oxysterol binding / phosphoinositide binding | GO:0035091|phosphoinositide binding;GO:0007165|signal transduction;GO:0008142|oxysterol binding;GO:0008202|steroid metabolic process;GO:0005575|cellular_component | GhM_A02G0881.1,GhM_D02G0873.1,GhM_A06G0491.1,GhM_A05G2599.1,GhM_D05G2612.1,GhM_A05G3021.1,GhM_D05G3023.1,GhM_A11G0299.1,GhM_A03G0172.1,GhM_D03G1925.1,GhM_A09G2380.1,GhM_D09G2268.1,GhM_D11G0284.1,GhM_D06G0503.1,GhM_Scaf189G317.1,GhM_A03G1781.1,GhM_D02G1859.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT2G22740 | SUVH6; SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0008168|methyltransferase activity;GO:0010429|methyl-CpNpN binding;GO:0016571|histone methylation;GO:0008327|methyl-CpG binding | GhM_A02G0999.1,GhM_A03G1549.1,GhM_A02G1329.1,GhM_A03G1124.1,GhM_A11G2642.1,GhM_A10G1363.1,GhM_A05G3621.1,GhM_A13G1111.1,GhM_A10G1417.1,GhM_A03G1317.1,GhM_A09G0673.1,GhM_A06G0740.1,GhM_A05G3695.1,GhM_A13G0950.1,GhM_A10G1408.1,GhM_A08G1062.1,GhM_A09G0564.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT2G29050||AT1G12750||AT1G63120||AT3G53780 | ATRBL1; ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)||ATRBL4; rhomboid family protein||ATRBL2; ATRBL2 (Arabidopsis thaliana Rhomboid-like 2); serine-type endopeptidase||ATRBL6; ATRBL6 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 6) | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0004252|serine-type endopeptidase activity;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016021|integral to membrane | GhM_A03G0267.1,GhM_D03G1850.1,GhM_A08G2343.1,GhM_A09G2191.1,GhM_D12G3068.1,GhM_A12G3183.1,GhM_D08G2290.1,GhM_D11G0099.1,GhM_A03G0605.1,GhM_D03G1515.1,GhM_D05G1056.1,GhM_A05G1045.1,GhM_A09G1931.1,GhM_D09G1829.1,GhM_A12G2810.1,GhM_D12G2699.1,GhM_D12G1698.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT1G27500||AT3G27960||AT4G10840 | kinesin light chain-related | GO:0009860|pollen tube growth;GO:0005488|binding;GO:0005575|cellular_component;GO:0005886|plasma membrane | GhM_A03G1312.1,GhM_D02G1362.1,GhM_A07G0509.1,GhM_D07G0502.1,GhM_D07G0501.1,GhM_A05G4294.1,GhM_D04G0642.1,GhM_A09G0347.1,GhM_D09G0325.1,GhM_D09G2199.1,GhM_A07G1666.1,GhM_D07G1633.1,GhM_A11G1143.1,GhM_D11G1160.1,GhM_A09G2297.1,GhM_A11G1142.1,GhM_D11G1159.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT5G53160||AT1G01360||AT4G27920 | unknown protein | GO:0006950|response to stress;GO:0003674|molecular_function;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0010427|abscisic acid binding;GO:0005575|cellular_component;GO:0009738|abscisic acid mediated signaling pathway | GhM_A05G0777.1,GhM_D05G0801.1,GhM_A05G4901.1,GhM_D04G0044.1,GhM_A08G1717.1,GhM_D08G1664.1,GhM_A09G2234.1,GhM_D09G2141.1,GhM_A11G0277.1,GhM_D11G0269.1,GhM_A11G1118.1,GhM_D11G1128.1,GhM_A12G2915.1,GhM_D12G2805.1,GhM_A12G3086.1,GhM_D12G2970.1,GhM_D08G1453.1 | 17 | 0 | Gossypium | Cotton | |||
| - | AT3G08900||AT3G02230||AT5G15650 | RGP3, RGP; RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups||RGP1, ATRGP1; RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1); cellulose synthase (UDP-forming)||RGP2, ATRGP2; RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups | GO:0022626|cytosolic ribosome;GO:0009832|plant-type cell wall biogenesis;GO:0000138|Golgi trans cisterna;GO:0046686|response to cadmium ion;GO:0005886|plasma membrane;GO:0005795|Golgi stack;GO:0030244|cellulose biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0009651|response to salt stress;GO:0016760|cellulose synthase (UDP-forming) activity;GO:0005618|cell wall;GO:0007047|cellular cell wall organization;GO:0016020|membrane | GhM_A07G0808.1,GhM_D07G0807.1,GhM_A07G0958.1,GhM_D07G0955.1,GhM_A07G2096.1,GhM_D07G2073.1,GhM_A07G2302.1,GhM_A11G1861.1,GhM_A11G0423.1,GhM_D11G0405.1,GhM_A12G2341.1,GhM_D12G2236.1,GhM_A13G0964.1,GhM_D11G1849.1,GhM_D06G1617.1,GhM_D07G2237.1,GhM_D13G0959.1 | 17 | 0 | Gossypium | Cotton | |||
| TA3457:GhM_A08G1446.1,GhM_A08G1447.1 | - | - | - | GhM_A01G0600.1,GhM_A02G1300.1,GhM_A02G1354.1,GhM_A02G1377.1,GhM_A03G1409.1,GhM_A03G1830.1,GhM_A03G2048.1,GhM_A05G4123.1,GhM_A05G4330.1,GhM_A06G2000.1,GhM_A07G1157.1,GhM_A08G1070.1,GhM_A09G0812.1,GhM_A11G2849.1,GhM_D11G3134.1 | 17 | 1 | Gossypium | Cotton | |||
| TA1555:GhM_D01G0247.1,GhM_D01G0250.1;TA2102:GhM_A01G0280.1,GhM_A01G0283.1 | AT3G23510 | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative | GO:0008610|lipid biosynthetic process;GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0008825|cyclopropane-fatty-acyl-phospholipid synthase activity;GO:0016491|oxidoreductase activity | GhM_A10G1999.1,GhM_D10G0902.1,GhM_D10G2503.1,GhM_A10G1537.1,GhM_D10G1227.1,GhM_A01G2467.1,GhM_D01G0954.1,GhM_A05G3315.1,GhM_A08G0522.1,GhM_D13G2062.1,GhM_A10G1998.1,GhM_D10G0903.1,GhM_D02G1584.1 | 17 | 2 | Gossypium | Cotton | |||
| TA169:GhM_D13G2177.1,GhM_D13G2178.1,GhM_D13G2179.1,GhM_D13G2180.1,GhM_D13G2181.1,GhM_D13G2182.1;TA638:GhM_A13G2293.1,GhM_A13G2294.1,GhM_A13G2295.1 | AT3G04940||AT5G28020||AT3G22460||AT4G14880||AT2G43750 | OASA2; OASA2 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); catalytic/ cysteine synthase/ pyridoxal phosphate binding||CYSD2, ATCYSD2; CYSD2 (CYSTEINE SYNTHASE D2); catalytic/ cysteine synthase/ pyridoxal phosphate binding||ATCYSD1, CYSD1; CYSD1 (CYSTEINE SYNTHASE D1); cysteine synthase||OASB, ACS1, CPACS1, ATCS-B; OASB (O-ACETYLSERINE (THIOL) LYASE B); cysteine synthase||OASA1, CYTACS1; OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase | GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0005886|plasma membrane;GO:0010043|response to zinc ion;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0030170|pyridoxal phosphate binding;GO:0048046|apoplast;GO:0005829|cytosol;GO:0019344|cysteine biosynthetic process;GO:0004124|cysteine synthase activity;GO:0006535|cysteine biosynthetic process from serine;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0005777|peroxisome;GO:0005634|nucleus;GO:0009536|plastid | GhM_A08G2746.1,GhM_A09G2594.1,GhM_A09G2656.1,GhM_A13G1437.1,GhM_D08G2689.1,GhM_D09G2538.1,GhM_D13G1335.1,GhM_D13G1334.1 | 17 | 2 | Gossypium | Cotton | |||
| TA40:GhM_A11G4019.1,GhM_A11G4020.1,GhM_A11G4029.1,GhM_A11G4030.1,GhM_A11G4031.1,GhM_A11G4032.1,GhM_A11G4033.1,GhM_A11G4034.1,GhM_A11G4035.1,GhM_A11G4036.1;TA276:GhM_D11G3920.1,GhM_D11G3922.1,GhM_D11G3927.1,GhM_D11G3928.1,GhM_D11G3932.1 | - | - | - | GhM_A11G4045.1,GhM_D11G3918.1 | 17 | 2 | Gossypium | Cotton | |||
| TA536:GhM_A09G2909.1,GhM_A09G2910.1,GhM_A09G2911.1,GhM_A09G2912.1;TA849:GhM_D09G2772.1,GhM_D09G2773.1,GhM_D09G2774.1 | AT1G19900||AT1G75620||AT3G16565 | glyoxal oxidase-related||ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016876|ligase activity, forming aminoacyl-tRNA and related compounds;GO:0003674|molecular_function;GO:0043039|tRNA aminoacylation | GhM_A05G2881.1,GhM_A01G1242.1,GhM_A02G1128.1,GhM_A05G2102.1,GhM_A06G1854.1,GhM_D01G1219.1,GhM_D02G1091.1,GhM_D05G2123.1,GhM_A09G2913.1,GhM_D06G1824.1 | 17 | 2 | Gossypium | Cotton | |||
| TA996:GhM_A04G0642.1,GhM_A04G0643.1,GhM_A04G0645.1;TA3216:GhM_A05G3752.1,GhM_A05G3753.1 | - | - | - | GhM_A03G1154.1,GhM_A11G2097.1,GhM_D02G1384.1,GhM_Scaf001G002.1,GhM_Scaf001G016.1,GhM_Scaf076G224.1,GhM_A13G0004.1,GhM_D01G1233.1,GhM_D01G0582.1,GhM_D01G1391.1,GhM_D02G2436.1,GhM_D01G1708.1 | 17 | 2 | Gossypium | Cotton | |||
| TA138:GhM_A13G2127.1,GhM_A13G2128.1,GhM_A13G2130.1,GhM_A13G2131.1,GhM_A13G2133.1,GhM_A13G2134.1;TA283:GhM_D13G2015.1,GhM_D13G2016.1,GhM_D13G2017.1,GhM_D13G2018.1,GhM_D13G2019.1;TA2092:GhM_A01G0008.1,GhM_A01G0010.1;TA3255:GhM_A06G0001.1,GhM_A06G0002.1 | AT5G17540||AT3G03480 | CHAT; CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase); acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase||transferase family protein | GO:0008150|biological_process;GO:0010327|acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0010597|green leaf volatile biosynthetic process;GO:0005575|cellular_component | GhM_A01G0009.1,GhM_Scaf050G197.1 | 17 | 4 | Gossypium | Cotton | |||
| TA222:GhM_D01G2573.1,GhM_D01G2574.1,GhM_D01G2575.1,GhM_D01G2576.1,GhM_D01G2577.1;TA796:GhM_A01G2647.1,GhM_A01G2648.1,GhM_A01G2649.1;TA453:GhM_D12G2263.1,GhM_D12G2264.1,GhM_D12G2265.1,GhM_D12G2266.1;TA1420:GhM_A12G2368.1,GhM_A12G2369.1 | AT1G18590||AT1G74090||AT1G74100 | SOT17, ATSOT17, ATST5C; SOT17 (SULFOTRANSFERASE 17); desulfoglucosinolate sulfotransferase/ sulfotransferase||SOT18, ATSOT18, ATST5B; SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18); 3-methylthiopropyl-desulfoglucosinolate sulfotransferase/ 4-methylthiobutyl-desulfoglucosinolate sulfotransferase/ 5-methylthiopentyl-desulfoglucosinolate sulfotransferase/ 7-methylthioheptyl-desulfogluco||SOT16, ATSOT16, CORI-7, ATST5A; SOT16 (SULFOTRANSFERASE 16); desulfoglucosinolate sulfotransferase/ sulfotransferase | GO:0019761|glucosinolate biosynthetic process;GO:0032260|response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance;GO:0008146|sulfotransferase activity;GO:0047364|desulfoglucosinolate sulfotransferase activity;GO:0005575|cellular_component | GhM_A04G0119.1,GhM_A12G2342.1,GhM_D12G2237.1 | 17 | 4 | Gossypium | Cotton | |||
| TA837:GhM_D09G1010.1,GhM_D09G1011.1,GhM_D09G1014.1;TA3157:GhM_A05G1705.1,GhM_A05G1719.1;TA1914:GhM_D05G1716.1,GhM_D05G1730.1;TA3540:GhM_A09G1074.1,GhM_A09G1076.1 | AT1G78580||AT1G06410 | ATTPS7, TPS7, ATTPSA; ATTPS7; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase||ATTPS1, TPS1; ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups | GO:0003825|alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity;GO:0008152|metabolic process;GO:0051301|cell division;GO:0005991|trehalose metabolic process;GO:0009793|embryonic development ending in seed dormancy;GO:0010182|sugar mediated signaling pathway;GO:0004805|trehalose-phosphatase activity;GO:0005992|trehalose biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0009790|embryonic development;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A01G0474.1,GhM_A04G0480.1,GhM_D01G0463.1,GhM_D05G3889.1,GhM_A06G2551.1,GhM_A10G0368.1,GhM_D10G0356.1,GhM_D06G2544.1 | 17 | 4 | Gossypium | Cotton | |||
| TA601:GhM_A12G0504.1,GhM_A12G0510.1,GhM_A12G0511.1;TA907:GhM_D12G0496.1,GhM_D12G0502.1,GhM_D12G0503.1;TA1364:GhM_A12G0505.1,GhM_A12G0508.1;TA2692:GhM_D12G0497.1,GhM_D12G0501.1;TA1365:GhM_A12G0506.1,GhM_A12G0509.1 | AT1G30410||AT2G34660||AT1G30400 | ATMRP13; ATMRP13; ATPase, coupled to transmembrane movement of substances||ATMRP1, EST1, ATABCC1, MRP1; MRP1 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase||ATMRP2, EST4, MRP2; ATMRP2 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 2); ATPase, coupled to transmembrane movement of substances | GO:0006810|transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0000325|plant-type vacuole;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0008559|xenobiotic-transporting ATPase activity;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A12G0628.1,GhM_D12G0626.1,GhM_D12G0499.1,GhM_D12G0627.1,GhM_D12G0498.1 | 17 | 5 | Gossypium | Cotton | |||
| TA733:GhM_D05G2631.1,GhM_D05G2632.1,GhM_D05G2634.1;TA1028:GhM_A05G2617.1,GhM_A05G2618.1,GhM_A05G2619.1;TA2185:GhM_A01G2351.1,GhM_A01G2353.1;TA3278:GhM_A06G0509.1,GhM_A06G0511.1;TA2023:GhM_D06G0518.1,GhM_D06G0520.1 | AT4G08290||AT4G08300||AT1G21890||AT1G44800 | nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003674|molecular_function | GhM_D01G2298.1,GhM_A02G0870.1,GhM_D02G0863.1,GhM_D06G1753.1,GhM_D12G0744.1 | 17 | 5 | Gossypium | Cotton | |||
| TA685:GhM_D03G1510.1,GhM_D03G1511.1,GhM_D03G1512.1;TA969:GhM_A03G0609.1,GhM_A03G0610.1,GhM_A03G0612.1;TA2233:GhM_D07G1182.1,GhM_D07G1183.1;TA3377:GhM_A07G1197.1,GhM_A07G1198.1;TA1019:GhM_A05G1038.1,GhM_A05G1039.1,GhM_A05G1040.1;TA722:GhM_D05G1049.1,GhM_D05G1050.1,GhM_D05G1051.1 | AT1G07530||AT2G29060 | scarecrow transcription factor family protein||SCL14, ATGRAS2, GRAS2; SCL14 (SCARECROW-LIKE 14); transcription factor | GO:0009410|response to xenobiotic stimulus;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0043193|positive regulation of gene-specific transcription;GO:0003700|transcription factor activity;GO:0005829|cytosol;GO:0005575|cellular_component | GhM_A08G0065.1 | 17 | 6 | Gossypium | Cotton | |||
| - | AT1G08220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 100 Blast hits to 100 proteins in 48 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 63; Plants - 15; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | GO:0033615|mitochondrial proton-transporting ATP synthase complex assembly;GO:0005743|mitochondrial inner membrane;GO:0003674|molecular_function | GhM_A01G0016.1,GhM_A05G3966.1,GhM_A01G1675.1,GhM_A03G0824.1,GhM_A10G0695.1,GhM_A02G1022.1,GhM_A04G1205.1,GhM_A04G0483.1,GhM_A06G1935.1,GhM_A06G1745.1,GhM_A02G1186.1,GhM_A06G1227.1,GhM_A05G0601.1,GhM_A13G2026.1,GhM_A09G0642.1,GhM_A10G2147.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT3G16570||AT4G15800 | RALFL23; RALFL23 (ralf-like 23); signal transducer||RALFL33; RALFL33 (ralf-like 33); signal transducer | GO:0009505|plant-type cell wall;GO:0009741|response to brassinosteroid stimulus;GO:0004871|signal transducer activity;GO:0048046|apoplast;GO:0007267|cell-cell signaling;GO:0045926|negative regulation of growth | GhM_A01G0296.1,GhM_D01G0273.1,GhM_A02G0554.1,GhM_D02G0540.1,GhM_A08G1601.1,GhM_D08G1555.1,GhM_D11G1351.1,GhM_A08G0550.1,GhM_D08G0516.1,GhM_A11G1353.1,GhM_A11G3359.1,GhM_A08G2687.1,GhM_D08G2631.1,GhM_D11G3273.1,GhM_A10G2054.1,GhM_D10G1991.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT3G14940||AT1G53310 | ATPPC1; ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1); catalytic/ phosphoenolpyruvate carboxylase||ATPPC3; ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3); phosphoenolpyruvate carboxylase | GO:0005515|protein binding;GO:0048046|apoplast;GO:0005829|cytosol;GO:0006099|tricarboxylic acid cycle;GO:0008964|phosphoenolpyruvate carboxylase activity | GhM_A01G0581.1,GhM_D01G0548.1,GhM_A02G0853.1,GhM_A13G2004.1,GhM_A02G0854.1,GhM_D13G1903.1,GhM_A02G1058.1,GhM_A08G3028.1,GhM_A02G1059.1,GhM_D08G2960.1,GhM_A02G1807.1,GhM_A09G0023.1,GhM_D09G0015.1,GhM_A12G0615.1,GhM_D12G0857.1,GhM_A12G0997.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT4G14350||AT1G30640||AT1G03920||AT4G33080 | protein kinase, putative||protein kinase family protein | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0009524|phragmoplast;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A02G0447.1,GhM_D02G0443.1,GhM_A02G1056.1,GhM_D02G1184.1,GhM_A08G2474.1,GhM_A05G0339.1,GhM_D05G0356.1,GhM_A05G0436.1,GhM_D05G0457.1,GhM_D08G2423.1,GhM_A09G2800.1,GhM_D09G2676.1,GhM_A10G1307.1,GhM_D10G1810.1,GhM_A11G1550.1,GhM_D11G1544.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT3G63000||AT3G28730 | NPL41; NPL41 (NPL4-LIKE PROTEIN 1)||ATHMG, SSRP1, NFD; ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor | GO:0008150|biological_process;GO:0005719|nuclear euchromatin;GO:0003674|molecular_function;GO:0035101|FACT complex;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A02G0614.1,GhM_A02G1874.1,GhM_A08G2465.1,GhM_A04G0920.1,GhM_A11G3116.1,GhM_A06G1750.1,GhM_A08G1580.1,GhM_D08G1530.1,GhM_A12G0077.1,GhM_D12G0081.1,GhM_A06G1751.1,GhM_D11G0817.1,GhM_A08G2464.1,GhM_A11G0798.1,GhM_A09G0292.1,GhM_D09G0263.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT1G02500||AT2G36880||AT4G01850 | SAM-2, MAT2; SAM-2 (S-ADENOSYLMETHIONINE SYNTHETASE 2); copper ion binding / methionine adenosyltransferase||SAM1, SAM-1, MAT1; SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1); methionine adenosyltransferase||MAT3; MAT3 (methionine adenosyltransferase 3); copper ion binding / methionine adenosyltransferase | GO:0009693|ethylene biosynthetic process;GO:0005507|copper ion binding;GO:0004478|methionine adenosyltransferase activity;GO:0046686|response to cadmium ion;GO:0006556|S-adenosylmethionine biosynthetic process;GO:0006730|one-carbon metabolic process;GO:0009651|response to salt stress;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A02G0663.1,GhM_D02G0654.1,GhM_A04G0942.1,GhM_D04G1395.1,GhM_A07G1590.1,GhM_D07G1558.1,GhM_A08G1651.1,GhM_D08G1607.1,GhM_A09G1829.1,GhM_D09G1722.1,GhM_A11G1243.1,GhM_D11G1248.1,GhM_A11G4065.1,GhM_D11G3962.1,GhM_A12G1582.1,GhM_D12G1534.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT2G32070||AT1G80780 | CCR4-NOT transcription complex protein, putative | GO:0005634|nucleus;GO:0003676|nucleic acid binding;GO:0009451|RNA modification;GO:0004540|ribonuclease activity | GhM_A02G1325.1,GhM_A13G2409.1,GhM_A05G0638.1,GhM_D05G0655.1,GhM_A06G1389.1,GhM_D06G1467.1,GhM_A06G2384.1,GhM_D06G2389.1,GhM_A07G0344.1,GhM_A05G4464.1,GhM_A07G0399.1,GhM_D07G0397.1,GhM_A13G1514.1,GhM_D13G2309.1,GhM_D07G0344.1,GhM_A08G0944.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT2G44680||AT5G47080 | CKB1; CKB1; protein kinase regulator||CKB4; CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase | GO:0005956|protein kinase CK2 complex;GO:0042753|positive regulation of circadian rhythm;GO:0005634|nucleus;GO:0048573|photoperiodism, flowering;GO:0005737|cytoplasm;GO:0006468|protein amino acid phosphorylation;GO:0019887|protein kinase regulator activity;GO:0016567|protein ubiquitination;GO:0007623|circadian rhythm;GO:0004674|protein serine/threonine kinase activity | GhM_A03G0101.1,GhM_D03G1999.1,GhM_A08G0381.1,GhM_D08G0369.1,GhM_A08G1885.1,GhM_D08G1836.1,GhM_A08G2137.1,GhM_D08G2093.1,GhM_A11G0324.1,GhM_D11G0311.1,GhM_A11G0868.1,GhM_A12G1316.1,GhM_D12G1254.1,GhM_A12G2670.1,GhM_D12G2560.1,GhM_D11G0883.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT1G08040||AT1G67850||AT3G27470 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0461.1,GhM_D03G1669.1,GhM_A05G1148.1,GhM_D05G1165.1,GhM_A12G1900.1,GhM_A03G1826.1,GhM_D02G1888.1,GhM_D12G1827.1,GhM_D04G0684.1,GhM_A05G4253.1,GhM_D10G0928.1,GhM_A10G1169.1,GhM_D07G2780.1,GhM_A07G2874.1,GhM_A13G2950.1,GhM_D13G2853.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT1G36240||AT1G77940||AT2G40190 | 60S ribosomal protein L30 (RPL30B)||60S ribosomal protein L30 (RPL30A)||glycosyl transferase family 1 protein | GO:0022626|cytosolic ribosome;GO:0005789|endoplasmic reticulum membrane;GO:0009832|plant-type cell wall biogenesis;GO:0009737|response to abscisic acid stimulus;GO:0022625|cytosolic large ribosomal subunit;GO:0006970|response to osmotic stress;GO:0006496|protein amino acid terminal N-glycosylation;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A03G0492.1,GhM_D03G1637.1,GhM_A05G1111.1,GhM_D08G2482.1,GhM_A08G2549.1,GhM_D05G1128.1,GhM_A11G0637.1,GhM_D11G0645.1,GhM_A11G2331.1,GhM_D11G2577.1,GhM_D02G0774.1,GhM_D05G2840.1,GhM_D02G0708.1,GhM_D03G1517.1,GhM_D12G1172.1,GhM_D08G1514.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT4G34500||AT4G01330||AT1G01540||AT4G02630 | protein kinase family protein||ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A03G2538.1,GhM_D02G2564.1,GhM_A12G0307.1,GhM_D12G0308.1,GhM_D11G1073.1,GhM_A07G1722.1,GhM_D07G1690.1,GhM_A11G1062.1,GhM_A12G1425.1,GhM_D12G1355.1,GhM_D05G2947.1,GhM_A05G2293.1,GhM_D05G2310.1,GhM_A05G2934.1,GhM_A11G2264.1,GhM_D11G2231.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT5G08380||AT5G08370||AT3G56310 | AtAGAL2; AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||AtAGAL1; AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative | GO:0005990|lactose catabolic process;GO:0009505|plant-type cell wall;GO:0008152|metabolic process;GO:0009965|leaf morphogenesis;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0004557|alpha-galactosidase activity;GO:0005618|cell wall;GO:0009911|positive regulation of flower development;GO:0005773|vacuole | GhM_A04G1428.1,GhM_D04G1914.1,GhM_A11G1857.1,GhM_A10G0251.1,GhM_A05G1831.1,GhM_D05G1846.1,GhM_D10G0236.1,GhM_D11G3876.1,GhM_A10G2248.1,GhM_D10G2172.1,GhM_D02G2265.1,GhM_D06G0504.1,GhM_A13G0739.1,GhM_D13G0642.1,GhM_D04G1509.1,GhM_A10G0766.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT1G15690 | AVP1, ATAVP3, AVP-3; AVP1; ATPase/ hydrogen-translocating pyrophosphatase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005774|vacuolar membrane;GO:0016887|ATPase activity;GO:0010008|endosome membrane;GO:0009926|auxin polar transport;GO:0009678|hydrogen-translocating pyrophosphatase activity;GO:0005739|mitochondrion;GO:0000325|plant-type vacuole;GO:0009651|response to salt stress;GO:0010248|establishment or maintenance of transmembrane electrochemical gradient;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G0146.1,GhM_D05G0154.1,GhM_A05G1353.1,GhM_D05G1367.1,GhM_A06G0616.1,GhM_D06G0611.1,GhM_A08G1155.1,GhM_D08G1124.1,GhM_A08G2658.1,GhM_D08G2602.1,GhM_A09G1155.1,GhM_D09G1084.1,GhM_A13G1534.1,GhM_D13G2546.1,GhM_A13G2642.1,GhM_D13G1418.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT5G42660||AT4G29010 | unknown protein||AIM1; AIM1 (ABNORMAL INFLORESCENCE MERISTEM); enoyl-CoA hydratase | GO:0008150|biological_process;GO:0005618|cell wall;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A05G1496.1,GhM_A09G1180.1,GhM_A06G0406.1,GhM_A08G0142.1,GhM_A12G1874.1,GhM_D11G2379.1,GhM_D07G1928.1,GhM_D11G2122.1,GhM_D12G1140.1,GhM_D06G0760.1,GhM_A06G0760.1,GhM_A08G3105.1,GhM_A07G0066.1,GhM_D07G0077.1,GhM_D08G3035.1,GhM_D08G0644.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT4G11110||AT5G16210 | HEAT repeat-containing protein||SPA2; SPA2 (SPA1-RELATED 2); protein binding / signal transducer | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0005488|binding;GO:0005834|heterotrimeric G-protein complex;GO:0004871|signal transducer activity;GO:0006468|protein amino acid phosphorylation | GhM_A05G2406.1,GhM_A10G2264.1,GhM_A08G0535.1,GhM_A06G0440.1,GhM_A12G2902.1,GhM_A08G0536.1,GhM_D12G2792.1,GhM_A09G0604.1,GhM_A08G1109.1,GhM_A07G0735.1,GhM_A07G2233.1,GhM_D07G2174.1,GhM_A11G1935.1,GhM_D11G1919.1,GhM_D07G2173.1,GhM_D11G1920.1 | 16 | 0 | Gossypium | Cotton | |||
| - | AT2G41790||AT5G02280||AT2G21190 | ER lumen protein retaining receptor family protein||peptidase M16 family protein / insulinase family protein||synbindin, putative | GO:0003824|catalytic activity;GO:0006810|transport;GO:0003674|molecular_function;GO:0005801|cis-Golgi network;GO:0006621|protein retention in ER lumen;GO:0004872|receptor activity;GO:0016021|integral to membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0046923|ER retention sequence binding;GO:0006508|proteolysis;GO:0046872|metal ion binding;GO:0015031|protein transport;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A05G4094.1,GhM_D03G0541.1,GhM_A09G1934.1,GhM_D09G1833.1,GhM_A11G4099.1,GhM_D07G1937.1,GhM_D11G2693.1,GhM_D13G1091.1,GhM_D09G2459.1,GhM_A10G1639.1,GhM_D05G4243.1,GhM_D12G1716.1,GhM_D07G2265.1,GhM_D11G2070.1,GhM_D11G3994.1,GhM_D10G2215.1 | 16 | 0 | Gossypium | Cotton | |||
| TA1137:GhM_A10G0431.1,GhM_A10G0432.1 | AT2G34480||AT3G14600||AT1G29965 | 60S ribosomal protein L18A (RPL18aA)||60S ribosomal protein L18A (RPL18aB)||60S ribosomal protein L18A (RPL18aC) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0006499|N-terminal protein myristoylation;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A05G1669.1,GhM_A06G1721.1,GhM_A07G1431.1,GhM_A07G2332.1,GhM_A08G1462.1,GhM_A08G1620.1,GhM_A09G0917.1,GhM_A09G1060.1,GhM_D10G0420.1,GhM_D09G0996.1,GhM_D11G1833.1,GhM_A11G1840.1,GhM_D07G2271.1,GhM_D05G1679.1 | 16 | 1 | Gossypium | Cotton | |||
| TA1212:GhM_A10G2690.1,GhM_A10G2692.1;TA2518:GhM_D10G2606.1,GhM_D10G2608.1 | AT1G12600||AT4G23010 | ATUTR2, UTR2; UDP-galactose transporter-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, petal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter-related (TAIR:AT4G23010.1); Has 943 Blast hits to 943 proteins in 196 species: Archae - 2; Bacteria - 55; Metazoa - 506; Fungi - 148; Plants - 112; Viruses - 0; Other Eukaryotes - 120 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0827.1,GhM_A03G0841.1,GhM_A04G1272.1,GhM_A08G1756.1,GhM_A09G2342.1,GhM_A10G1304.1,GhM_A12G1374.1,GhM_D03G1278.1,GhM_D05G1719.1,GhM_D08G1708.1,GhM_D09G2242.1,GhM_D12G1317.1 | 16 | 2 | Gossypium | Cotton | |||
| TA1432:GhM_A12G2828.1,GhM_A12G2836.1;TA2745:GhM_D12G2716.1,GhM_D12G2723.1 | AT5G38830||AT2G31170 | tRNA synthetase class I (C) family protein||SYCO ARATH; SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA ligase/ nucleotide binding | GO:0004812|aminoacyl-tRNA ligase activity;GO:0046686|response to cadmium ion;GO:0000166|nucleotide binding;GO:0005737|cytoplasm;GO:0004817|cysteine-tRNA ligase activity;GO:0006418|tRNA aminoacylation for protein translation;GO:0006412|translation;GO:0006423|cysteinyl-tRNA aminoacylation;GO:0005524|ATP binding | GhM_A06G1446.1,GhM_D01G1286.1,GhM_D03G0576.1,GhM_D05G0017.1,GhM_D05G0906.1,GhM_D05G4115.1,GhM_D06G1397.1,GhM_D07G1011.1,GhM_D11G3196.1,GhM_D12G0858.1,GhM_D13G2213.1,GhM_D13G1996.1 | 16 | 2 | Gossypium | Cotton | |||
| TA1566:GhM_D01G0458.1,GhM_D01G0459.1;TA2112:GhM_A01G0470.1,GhM_A01G0472.1 | AT1G78570||AT1G63000||AT3G14790 | RHM3, ATRHM3; RHM3 (RHAMNOSE BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic||RHM1, ROL1, ATRHM1; RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic||NRS/ER, UER1; NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase | GO:0010280|UDP-L-rhamnose synthase activity;GO:0003824|catalytic activity;GO:0008830|dTDP-4-dehydrorhamnose 3,5-epimerase activity;GO:0005625|soluble fraction;GO:0010253|UDP-rhamnose biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0050377|UDP-glucose 4,6-dehydratase activity;GO:0010315|auxin efflux;GO:0008831|dTDP-4-dehydrorhamnose reductase activity;GO:0019305|dTDP-rhamnose biosynthetic process;GO:0010490|UDP-4-keto-rhamnose-4-keto-reductase activity;GO:0005886|plasma membrane;GO:0009225|nucleotide-sugar metabolic process;GO:0010489|UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity | GhM_D05G3888.1,GhM_A04G0482.1,GhM_D11G3591.1,GhM_A11G3671.1,GhM_D04G0441.1,GhM_A05G4508.1,GhM_A08G3017.1,GhM_D08G2949.1,GhM_A08G3018.1,GhM_D03G1873.1,GhM_A03G0241.1,GhM_D08G2950.1 | 16 | 2 | Gossypium | Cotton | |||
| TA2614:GhM_D11G2663.1,GhM_D11G2664.1;TA2925:GhM_A02G1685.1,GhM_A02G1691.1 | - | - | - | GhM_A01G1766.1,GhM_A02G1234.1,GhM_A05G3967.1,GhM_A10G2114.1,GhM_D12G0348.1,GhM_A13G2768.1,GhM_A07G0923.1,GhM_A10G1329.1,GhM_A13G0994.1,GhM_A08G0903.1,GhM_D08G1344.1,GhM_Scaf005G091.1 | 16 | 2 | Gossypium | Cotton | |||
| TA82:GhM_D05G3945.1,GhM_D05G3946.1,GhM_D05G3947.1,GhM_D05G3948.1,GhM_D05G3949.1,GhM_D05G3950.1,GhM_D05G3951.1,GhM_D05G3952.1;TA176:GhM_A04G0421.1,GhM_A04G0422.1,GhM_A04G0423.1,GhM_A04G0424.1,GhM_A04G0425.1,GhM_A04G0426.1 | AT5G45880||AT4G08685||AT1G29140||AT1G78040 | pollen Ole e 1 allergen and extensin family protein||SAH7; SAH7 | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0019656|glucose catabolic process to D-lactate and ethanol;GO:0019658|glucose catabolic process to lactate and acetate;GO:0003674|molecular_function;GO:0019650|glucose catabolic process to butanediol;GO:0019683|glyceraldehyde-3-phosphate catabolic process;GO:0019564|aerobic glycerol catabolic process;GO:0005615|extracellular space;GO:0019496|serine-isocitrate lyase pathway;GO:0019654|acetate fermentation;GO:0006094|gluconeogenesis;GO:0006096|glycolysis | GhM_A02G0299.1,GhM_D02G0321.1 | 16 | 2 | Gossypium | Cotton | |||
| TA1546:GhM_D01G0033.1,GhM_D01G0037.1;TA3101:GhM_A04G1601.1,GhM_A04G1602.1;TA1851:GhM_D04G2080.1,GhM_D04G2081.1 | AT4G34960||AT2G16600||AT2G21130||AT3G56070||AT3G63400||AT5G58710||AT2G29960 | CYP5, ATCYP5, CYP19-4; CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase||peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein||peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase||ROC3; ROC3; peptidyl-prolyl cis-trans isomerase||ROC7; ROC7; peptidyl-prolyl cis-trans isomerase||peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative||ROC2; ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase | GO:0048364|root development;GO:0005771|multivesicular body;GO:0009507|chloroplast;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0046686|response to cadmium ion;GO:0008380|RNA splicing;GO:0005795|Golgi stack;GO:0005624|membrane fraction;GO:0006457|protein folding;GO:0007165|signal transduction;GO:0005829|cytosol;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005783|endoplasmic reticulum | GhM_A01G0052.1,GhM_A01G0056.1,GhM_A01G2047.1,GhM_A13G1409.1,GhM_D01G2018.1,GhM_D12G0364.1,GhM_D13G1305.1,GhM_A05G0866.1,GhM_A09G1205.1,GhM_D09G1137.1 | 16 | 3 | Gossypium | Cotton | |||
| TA427:GhM_D09G0348.1,GhM_D09G0349.1,GhM_D09G0350.1,GhM_D09G0351.1;TA1108:GhM_A09G0369.1,GhM_A09G0371.1,GhM_A09G0372.1;TA3518:GhM_A09G0382.1,GhM_A09G0384.1 | AT4G39480||AT4G39490||AT5G52320 | CYP96A4; CYP96A4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A9; CYP96A9 (CYTOCHROME P450 96 A9); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A10; CYP96A10; electron carrier/ heme binding / iron ion binding / monooxygenase | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A11G2637.1,GhM_D09G0340.1,GhM_A09G0383.1,GhM_A11G2319.1,GhM_D11G2614.1,GhM_D10G1125.1,GhM_A11G2636.1 | 16 | 3 | Gossypium | Cotton | |||
| TA188:GhM_A07G1106.1,GhM_A07G1107.1,GhM_A07G1108.1,GhM_A07G1109.1,GhM_A07G1110.1,GhM_A07G1113.1;TA248:GhM_D07G1089.1,GhM_D07G1090.1,GhM_D07G1091.1,GhM_D07G1092.1,GhM_D07G1093.1;TA3407:GhM_A07G2558.1,GhM_A07G2559.1;TA811:GhM_D07G2460.1,GhM_D07G2461.1,GhM_D07G2462.1 | AT4G13010 | oxidoreductase, zinc-binding dehydrogenase family protein | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane;GO:0005773|vacuole;GO:0016491|oxidoreductase activity | - | 16 | 4 | Gossypium | Cotton | |||
| TA342:GhM_A13G0352.1,GhM_A13G0353.1,GhM_A13G0354.1,GhM_A13G0355.1;TA1193:GhM_A10G2211.1,GhM_A10G2212.1;TA2497:GhM_D10G2140.1,GhM_D10G2142.1;TA461:GhM_D13G0343.1,GhM_D13G0344.1,GhM_D13G0345.1,GhM_D13G0346.1 | AT4G32300||AT1G29720 | SD2-5; SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase||protein kinase family protein | GO:0005886|plasma membrane;GO:0004713|protein tyrosine kinase activity | GhM_A10G0439.1,GhM_D10G0428.1,GhM_D10G2171.1,GhM_D13G0101.1 | 16 | 4 | Gossypium | Cotton | |||
| TA370:GhM_D02G2710.1,GhM_D02G2711.1,GhM_D02G2712.1,GhM_D02G2713.1;TA2173:GhM_A01G2153.1,GhM_A01G2155.1;TA1612:GhM_D01G2128.1,GhM_D01G2129.1;TA976:GhM_A03G2690.1,GhM_A03G2691.1,GhM_A03G2693.1 | AT3G12500 | ATHCHIB, PR3, PR-3, CHI-B, B-CHI; ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase | GO:0046686|response to cadmium ion;GO:0004568|chitinase activity;GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway;GO:0005886|plasma membrane;GO:0050832|defense response to fungus;GO:0005773|vacuole | GhM_A01G2154.1,GhM_A06G0605.1,GhM_D06G0603.1,GhM_A11G1983.1,GhM_D11G1971.1 | 16 | 4 | Gossypium | Cotton | |||
| - | AT3G17820||AT5G35630||AT5G37600 | ATGSR1, GLN1;1, GSR 1; ATGSR1; copper ion binding / glutamate-ammonia ligase||ATGSKB6, GLN1.3, GLN1;3; ATGSKB6; copper ion binding / glutamate-ammonia ligase||GS2, GLN2, ATGSL1; GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase | GO:0022626|cytosolic ribosome;GO:0009941|chloroplast envelope;GO:0004356|glutamate-ammonia ligase activity;GO:0046686|response to cadmium ion;GO:0006542|glutamine biosynthetic process;GO:0042128|nitrate assimilation;GO:0005886|plasma membrane;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0005618|cell wall;GO:0016020|membrane;GO:0007568|aging;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0019676|ammonia assimilation cycle;GO:0009579|thylakoid;GO:0009535|chloroplast thylakoid membrane | GhM_A01G0182.1,GhM_D01G0162.1,GhM_A02G0296.1,GhM_D02G0319.1,GhM_A04G1389.1,GhM_D04G1878.1,GhM_A07G2254.1,GhM_D07G2184.1,GhM_A09G2445.1,GhM_D09G2329.1,GhM_A11G1962.1,GhM_D11G1948.1,GhM_A13G0690.1,GhM_D13G0685.1,GhM_D09G2041.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT5G44250||AT4G33360||AT5G49270||AT3G16860||AT4G16120 | ATSEB1, COBL7, SEB1; COBL7 (COBRA-LIKE 7)||COBL8; COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR)||terpene cyclase/mutase-related||SHV2, DER9, MRH4, COBL9; SHV2 (SHAVEN 2)||unknown protein | GO:0008150|biological_process;GO:0010053|root epidermal cell differentiation;GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0048765|root hair cell differentiation;GO:0003674|molecular_function;GO:0005488|binding;GO:0046658|anchored to plasma membrane;GO:0005783|endoplasmic reticulum;GO:0044237|cellular metabolic process;GO:0009932|cell tip growth;GO:0050662|coenzyme binding;GO:0005794|Golgi apparatus;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0006721|terpenoid metabolic process;GO:0005773|vacuole | GhM_A01G1323.1,GhM_D01G1296.1,GhM_A13G0651.1,GhM_A05G2261.1,GhM_D05G2279.1,GhM_A13G1428.1,GhM_A11G2620.1,GhM_A07G1603.1,GhM_A11G3053.1,GhM_A10G2124.1,GhM_A02G0600.1,GhM_D02G0593.1,GhM_D10G2058.1,GhM_A13G0650.1,GhM_A13G1427.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT4G34110||AT1G49760 | PAB8, PABP8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor||PAB2, PABP2, ATPAB2; PAB2 (POLY(A) BINDING 2); RNA binding / translation initiation factor | GO:0003723|RNA binding;GO:0003743|translation initiation factor activity;GO:0046686|response to cadmium ion;GO:0009651|response to salt stress;GO:0006413|translational initiation | GhM_A01G1366.1,GhM_D01G1339.1,GhM_A02G0996.1,GhM_A05G2298.1,GhM_A03G2464.1,GhM_D02G2487.1,GhM_A06G0208.1,GhM_D06G0215.1,GhM_A13G0467.1,GhM_A11G0573.1,GhM_D11G0565.1,GhM_D02G0990.1,GhM_D05G2315.1,GhM_A09G1165.1,GhM_D13G0454.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT3G52300 | ATPQ; ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL); hydrogen ion transmembrane transporter | GO:0022626|cytosolic ribosome;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0009579|thylakoid;GO:0005730|nucleolus;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A01G1525.1,GhM_D01G1448.1,GhM_A03G1603.1,GhM_D10G1489.1,GhM_A05G4093.1,GhM_D09G2045.1,GhM_A10G2205.1,GhM_D04G0983.1,GhM_D01G0470.1,GhM_D11G3641.1,GhM_D05G4096.1,GhM_D11G1739.1,GhM_D01G1486.1,GhM_D07G1927.1,GhM_D11G3790.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT3G53230||AT3G09840||AT5G03340 | CDC48, ATCDC48, CDC48A; CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding||cell division cycle protein 48, putative / CDC48, putative | GO:0009860|pollen tube growth;GO:0022626|cytosolic ribosome;GO:0016787|hydrolase activity;GO:0046686|response to cadmium ion;GO:0042802|identical protein binding;GO:0009524|phragmoplast;GO:0005886|plasma membrane;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0017111|nucleoside-triphosphatase activity;GO:0005635|nuclear envelope;GO:0005819|spindle;GO:0009846|pollen germination;GO:0005737|cytoplasm;GO:0005829|cytosol;GO:0016310|phosphorylation;GO:0005515|protein binding;GO:0051301|cell division;GO:0005488|binding;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0016887|ATPase activity;GO:0005524|ATP binding | GhM_A01G1659.1,GhM_D09G1744.1,GhM_A03G0441.1,GhM_A09G1849.1,GhM_A03G0442.1,GhM_D03G1687.1,GhM_A03G0440.1,GhM_A04G0951.1,GhM_D04G1402.1,GhM_A11G4067.1,GhM_D11G3964.1,GhM_D01G1642.1,GhM_D01G1643.1,GhM_A03G0417.1,GhM_D03G1711.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT3G13470||AT1G55490||AT5G56500||AT1G26230 | ATP binding / protein binding||chaperonin, putative||CPN60B, LEN1; CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding | GO:0022626|cytosolic ribosome;GO:0009941|chloroplast envelope;GO:0008219|cell death;GO:0005886|plasma membrane;GO:0051085|chaperone mediated protein folding requiring cofactor;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0044267|cellular protein metabolic process;GO:0005730|nucleolus;GO:0016020|membrane;GO:0009627|systemic acquired resistance;GO:0048046|apoplast;GO:0010319|stromule;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0006457|protein folding;GO:0005524|ATP binding;GO:0009409|response to cold | GhM_A02G1098.1,GhM_A10G2436.1,GhM_A05G1457.1,GhM_D05G1471.1,GhM_A08G1519.1,GhM_D10G2365.1,GhM_A10G1674.1,GhM_A10G1454.1,GhM_D09G0755.1,GhM_D04G1061.1,GhM_D11G3093.1,GhM_D07G2487.1,GhM_D06G1293.1,GhM_A13G1293.1,GhM_D13G1197.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT1G06900||AT2G02380||AT5G37630 | EMB2656; EMB2656 (EMBRYO DEFECTIVE 2656); binding||ATGSTZ2; ATGSTZ2; catalytic/ glutathione transferase||catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | GO:0003824|catalytic activity;GO:0005488|binding;GO:0009793|embryonic development ending in seed dormancy;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm;GO:0007076|mitotic chromosome condensation;GO:0006508|proteolysis;GO:0046872|metal ion binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A03G0358.1,GhM_D03G1766.1,GhM_D07G1498.1,GhM_D09G0676.1,GhM_D07G1497.1,GhM_D03G0602.1,GhM_D08G1205.1,GhM_D04G1006.1,GhM_D11G3098.1,GhM_D04G1420.1,GhM_D09G0177.1,GhM_D07G2152.1,GhM_D07G2153.1,GhM_D09G0176.1,GhM_D11G3427.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT4G28080||AT1G15290||AT1G01320 | tetratricopeptide repeat (TPR)-containing protein||binding | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A04G0717.1,GhM_D04G1041.1,GhM_A06G0852.1,GhM_A10G2515.1,GhM_A11G2227.1,GhM_A06G1351.1,GhM_D06G1486.1,GhM_A06G1349.1,GhM_A06G1350.1,GhM_D06G2402.1,GhM_A06G2396.1,GhM_A08G1709.1,GhM_D08G1657.1,GhM_A12G1480.1,GhM_D12G1418.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT5G35160||AT4G12650 | LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12650.1); Has 1053 Blast hits to 1004 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 478; Fungi - 143; Plants - 250; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink).||LOCATED IN: integral to membrane, Golgi apparatus, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35160.1); Has 983 Blast hits to 980 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 434; Fungi - 144; Plants - 228; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0005794|Golgi apparatus;GO:0005773|vacuole | GhM_A05G0124.1,GhM_D05G0130.1,GhM_D13G2560.1,GhM_A06G0570.1,GhM_D06G0573.1,GhM_A07G0484.1,GhM_D07G0478.1,GhM_A13G2656.1,GhM_D05G0131.1,GhM_A11G1721.1,GhM_A07G1071.1,GhM_D07G1052.1,GhM_A07G2517.1,GhM_D07G2419.1,GhM_D11G1709.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT2G27210||AT4G03080 | BSL1; kelch repeat-containing serine/threonine phosphoesterase family protein||BSL3; kelch repeat-containing serine/threonine phosphoesterase family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0016787|hydrolase activity;GO:0030145|manganese ion binding;GO:0004721|phosphoprotein phosphatase activity;GO:0005506|iron ion binding;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A05G0857.1,GhM_D05G0877.1,GhM_A05G3532.1,GhM_D08G0114.1,GhM_A08G0125.1,GhM_A09G1319.1,GhM_D09G1247.1,GhM_A11G1399.1,GhM_A08G0568.1,GhM_D08G0539.1,GhM_A11G1398.1,GhM_D11G1389.1,GhM_D06G2026.1,GhM_D01G2194.1,GhM_D12G2983.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT4G02880||AT3G50810||AT4G02070||AT1G03290 | unknown protein||MSH6, MSH6-1, ATMSH6; MSH6 (MUTS HOMOLOG 6); damaged DNA binding | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0006298|mismatch repair;GO:0003684|damaged DNA binding;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A07G2511.1,GhM_D13G0914.1,GhM_A08G2265.1,GhM_D03G0208.1,GhM_A08G2417.1,GhM_D08G2362.1,GhM_D08G2361.1,GhM_D13G2414.1,GhM_A12G1239.1,GhM_D12G0842.1,GhM_D02G1809.1,GhM_D01G1412.1,GhM_D02G1808.1,GhM_D05G3457.1,GhM_D06G0678.1 | 15 | 0 | Gossypium | Cotton | |||
| - | AT5G17310||AT3G03250||AT5G61450 | UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative||2-phosphoglycerate kinase-related||UGP; UGP (UDP-glucose pyrophosphorylase); UTP:glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase | GO:0005985|sucrose metabolic process;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0016779|nucleotidyltransferase activity;GO:0009651|response to salt stress;GO:0003983|UTP:glucose-1-phosphate uridylyltransferase activity;GO:0005886|plasma membrane;GO:0016036|cellular response to phosphate starvation | GhM_A08G0484.1,GhM_D08G0468.1,GhM_A11G1973.1,GhM_D11G1960.1,GhM_D03G0866.1,GhM_D03G1317.1,GhM_D04G0627.1,GhM_D10G1011.1,GhM_D09G0517.1,GhM_D11G2832.1,GhM_D13G1732.1,GhM_D11G2044.1,GhM_D10G1889.1,GhM_D04G0592.1,GhM_D04G1405.1 | 15 | 0 | Gossypium | Cotton | |||
| TA1754:GhM_D03G1112.1,GhM_D03G1113.1 | AT1G74500||AT1G26945||AT3G28857||AT3G47810 | transcription regulator||bHLH family protein||MAG1; MAG1 (MAIGO 1); hydrolase/ protein serine/threonine phosphatase||KDR; KDR (KIDARI); transcription regulator | GO:0048364|root development;GO:0005771|multivesicular body;GO:0016787|hydrolase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0045449|regulation of transcription;GO:0010086|embryonic root morphogenesis;GO:0003677|DNA binding;GO:0004722|protein serine/threonine phosphatase activity;GO:0005792|microsome;GO:0016020|membrane;GO:0030528|transcription regulator activity;GO:0030904|retromer complex;GO:0006623|protein targeting to vacuole;GO:0005737|cytoplasm;GO:0009416|response to light stimulus;GO:0003700|transcription factor activity;GO:0005515|protein binding;GO:0005634|nucleus;GO:0008333|endosome to lysosome transport | GhM_A03G0881.1,GhM_A03G1326.1,GhM_A05G3512.1,GhM_A07G2765.1,GhM_A09G0253.1,GhM_A11G0387.1,GhM_A12G2132.1,GhM_D02G1464.1,GhM_D11G0370.1,GhM_D12G2040.1,GhM_D09G0228.1,GhM_D07G2672.1,GhM_D05G3463.1 | 15 | 1 | Gossypium | Cotton | |||
| TA2036:GhM_D06G1109.1,GhM_D06G1110.1 | AT4G26270||AT5G61580||AT5G56630 | PFK7; PFK7 (PHOSPHOFRUCTOKINASE 7); 6-phosphofructokinase||PFK4; PFK4 (PHOSPHOFRUCTOKINASE 4); 6-phosphofructokinase||PFK3; PFK3 (PHOSPHOFRUCTOKINASE 3); 6-phosphofructokinase | GO:0005945|6-phosphofructokinase complex;GO:0009507|chloroplast;GO:0003872|6-phosphofructokinase activity;GO:0005829|cytosol;GO:0006096|glycolysis | GhM_A02G1530.1,GhM_A05G0292.1,GhM_A06G0818.1,GhM_A06G1098.1,GhM_A07G0280.1,GhM_A07G0544.1,GhM_A13G2563.1,GhM_D03G0643.1,GhM_D05G0306.1,GhM_D06G0823.1,GhM_D07G0280.1,GhM_D13G2477.1,GhM_D07G0535.1 | 15 | 1 | Gossypium | Cotton | |||
| TA2296:GhM_D08G0324.1,GhM_D08G0325.1 | AT5G56010||AT5G52640 | HSP81-3; HSP81-3; ATP binding / unfolded protein binding||HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90.1; ATHSP90.1 (HEAT SHOCK PROTEIN 90.1); ATP binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0046685|response to arsenic;GO:0009408|response to heat;GO:0005730|nucleolus;GO:0006457|protein folding;GO:0005829|cytosol;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A01G1000.1,GhM_A03G0329.1,GhM_A08G0341.1,GhM_A08G1560.1,GhM_A08G1562.1,GhM_A08G1563.1,GhM_A12G3133.1,GhM_A13G1770.1,GhM_D01G0970.1,GhM_D03G1795.1,GhM_D13G1648.1,GhM_D12G3019.1,GhM_D08G1513.1 | 15 | 1 | Gossypium | Cotton | |||
| TA2773:GhM_D13G0234.1,GhM_D13G0236.1 | AT2G39360||AT5G59700||AT3G46290||AT5G24010||AT5G54380 | THE1; THE1 (THESEUS1); kinase/ protein kinase||protein kinase, putative||protein kinase family protein | GO:0009826|unidimensional cell growth;GO:0051510|regulation of unidimensional cell growth;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0009741|response to brassinosteroid stimulus;GO:0006468|protein amino acid phosphorylation;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A13G0249.1,GhM_D04G0704.1,GhM_A05G4229.1,GhM_A07G1146.1,GhM_A08G0041.1,GhM_D03G1609.1,GhM_D07G1125.1,GhM_D08G0032.1,GhM_A03G0522.1,GhM_A12G3139.1,GhM_D12G3025.1,GhM_A01G0716.1,GhM_D01G0685.1 | 15 | 1 | Gossypium | Cotton | |||
| TA31:GhM_A10G2904.1,GhM_A10G2908.1,GhM_A10G2910.1,GhM_A10G2911.1,GhM_A10G2912.1,GhM_A10G2914.1,GhM_A10G2918.1,GhM_A10G2919.1,GhM_A10G2924.1,GhM_A10G2925.1,GhM_A10G2926.1 | AT3G09250||AT5G17680||AT4G08450||AT5G36930||AT1G66090||AT4G12010 | DNA binding / nuclease||disease resistance protein (TIR-NBS class), putative||disease resistance protein (TIR-NBS-LRR class), putative | GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0009507|chloroplast;GO:0031224|intrinsic to membrane;GO:0006289|nucleotide-excision repair;GO:0045087|innate immune response;GO:0000166|nucleotide binding;GO:0006915|apoptosis;GO:0003677|DNA binding;GO:0004518|nuclease activity;GO:0007165|signal transduction;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A09G2004.1,GhM_D10G2886.1,GhM_D09G1904.1,GhM_D13G0076.1 | 15 | 1 | Gossypium | Cotton | |||
| TA805:GhM_D07G1016.1,GhM_D07G1017.1,GhM_D07G1018.1 | AT1G05010 | EFE, ACO4, EAT1; EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase | GO:0009693|ethylene biosynthetic process;GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity;GO:0009620|response to fungus | GhM_A07G1028.1,GhM_A05G1955.1,GhM_A06G2011.1,GhM_A07G2409.1,GhM_A08G0650.1,GhM_A11G1793.1,GhM_D05G1965.1,GhM_D06G1995.1,GhM_D06G1996.1,GhM_D08G0620.1,GhM_D07G2328.1,GhM_D11G1779.1 | 15 | 1 | Gossypium | Cotton | |||
| TA103:GhM_A13G1883.1,GhM_A13G1884.1,GhM_A13G1885.1,GhM_A13G1890.1,GhM_A13G1892.1,GhM_A13G1894.1,GhM_A13G1896.1;TA167:GhM_D13G1776.1,GhM_D13G1779.1,GhM_D13G1780.1,GhM_D13G1785.1,GhM_D13G1787.1,GhM_D13G1790.1 | AT1G78760||AT5G56420||AT1G66300||AT3G49150||AT1G78750||AT1G51370||AT3G59190||AT3G59210 | F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein insertion into membrane; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), 60 kDa inner membrane insertion protein (InterPro:IPR001708), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G59240.1); Has 1228 Blast hits to 1197 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 2; Plants - 1199; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0051205|protein insertion into membrane;GO:0005575|cellular_component;GO:0016021|integral to membrane | GhM_A13G1887.1,GhM_A13G1897.1 | 15 | 2 | Gossypium | Cotton | |||
| TA1292:GhM_A11G2889.1,GhM_A11G2890.1;TA2621:GhM_D11G2841.1,GhM_D11G2842.1 | AT5G20950||AT5G04885||AT5G20940 | glycosyl hydrolase family 3 protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005618|cell wall;GO:0031225|anchored to membrane;GO:0016020|membrane | GhM_A05G0843.1,GhM_A05G3238.1,GhM_A07G1386.1,GhM_A09G1343.1,GhM_A13G1343.1,GhM_D05G0863.1,GhM_D05G3222.1,GhM_D07G1363.1,GhM_D09G1261.1,GhM_D13G1245.1,GhM_D13G1246.1 | 15 | 2 | Gossypium | Cotton | |||
| TA133:GhM_A11G1847.1,GhM_A11G1849.1,GhM_A11G1850.1,GhM_A11G1852.1,GhM_A11G1855.1,GhM_A11G1856.1;TA162:GhM_D11G1838.1,GhM_D11G1839.1,GhM_D11G1842.1,GhM_D11G1843.1,GhM_D11G1844.1,GhM_D11G1845.1 | AT3G51550||AT5G28680 | FER; FER (FERONIA); kinase/ protein kinase||protein kinase family protein | GO:0009860|pollen tube growth;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0016324|apical plasma membrane;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0043680|filiform apparatus;GO:0004674|protein serine/threonine kinase activity | GhM_D13G2538.1,GhM_A11G1853.1,GhM_A11G1854.1 | 15 | 2 | Gossypium | Cotton | |||
| TA33:GhM_A01G0746.1,GhM_A01G0747.1,GhM_A01G0748.1,GhM_A01G0749.1,GhM_A01G0750.1,GhM_A01G0753.1,GhM_A01G0754.1,GhM_A01G0755.1,GhM_A01G0757.1,GhM_A01G0758.1,GhM_A01G0759.1;TA354:GhM_D01G0712.1,GhM_D01G0713.1,GhM_D01G0714.1,GhM_D01G0717.1 | AT4G21380||AT4G27290||AT1G61390||AT4G27300 | ARK3; ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase||S-locus protein kinase, putative||ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0005773|vacuole;GO:0004674|protein serine/threonine kinase activity | - | 15 | 2 | Gossypium | Cotton | |||
| TA43:GhM_D03G0432.1,GhM_D03G0433.1,GhM_D03G0434.1,GhM_D03G0435.1,GhM_D03G0436.1,GhM_D03G0437.1,GhM_D03G0438.1,GhM_D03G0439.1,GhM_D03G0440.1,GhM_D03G0441.1;TA958:GhM_A02G1715.1,GhM_A02G1716.1,GhM_A02G1718.1 | AT1G74100||AT5G07010||AT1G18590||AT5G07000 | ATST2B, ST2B; ST2B (SULFOTRANSFERASE 2B); hydroxyjasmonate sulfotransferase/ sulfotransferase||ATST2A, ST2A; ST2A (SULFOTRANSFERASE 2A); hydroxyjasmonate sulfotransferase/ sulfotransferase||SOT17, ATSOT17, ATST5C; SOT17 (SULFOTRANSFERASE 17); desulfoglucosinolate sulfotransferase/ sulfotransferase||SOT16, ATSOT16, CORI-7, ATST5A; SOT16 (SULFOTRANSFERASE 16); desulfoglucosinolate sulfotransferase/ sulfotransferase | GO:0008150|biological_process;GO:0009694|jasmonic acid metabolic process;GO:0019761|glucosinolate biosynthetic process;GO:0032260|response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance;GO:0008146|sulfotransferase activity;GO:0047364|desulfoglucosinolate sulfotransferase activity;GO:0009753|response to jasmonic acid stimulus;GO:0005575|cellular_component | GhM_A13G2364.1,GhM_D13G2263.1 | 15 | 2 | Gossypium | Cotton | |||
| TA47:GhM_A04G1696.1,GhM_A04G1698.1,GhM_A04G1699.1,GhM_A04G1700.1,GhM_A04G1701.1,GhM_A04G1703.1,GhM_A04G1704.1,GhM_A04G1707.1,GhM_A04G1708.1,GhM_A04G1711.1;TA383:GhM_D04G2178.1,GhM_D04G2179.1,GhM_D04G2184.1,GhM_D04G2186.1 | - | - | - | GhM_D04G2030.1 | 15 | 2 | Gossypium | Cotton | |||
| TA628:GhM_A13G1554.1,GhM_A13G1555.1,GhM_A13G1556.1;TA2814:GhM_D13G1434.1,GhM_D13G1435.1 | AT1G56600||AT2G47180 | AtGolS1; AtGolS1 (Arabidopsis thaliana galactinol synthase 1); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtGolS2; AtGolS2 (Arabidopsis thaliana galactinol synthase 2); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0016051|carbohydrate biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0009414|response to water deprivation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A07G1579.1,GhM_A08G2639.1,GhM_A09G2939.1,GhM_A11G1262.1,GhM_A13G2360.1,GhM_D07G1546.1,GhM_D08G2583.1,GhM_D09G2800.1,GhM_D11G1265.1,GhM_D13G2260.1 | 15 | 2 | Gossypium | Cotton | |||
| TA78:GhM_D03G1851.1,GhM_D03G1852.1,GhM_D03G1853.1,GhM_D03G1854.1,GhM_D03G1855.1,GhM_D03G1856.1,GhM_D03G1857.1,GhM_D03G1858.1;TA173:GhM_A03G0261.1,GhM_A03G0262.1,GhM_A03G0263.1,GhM_A03G0264.1,GhM_A03G0265.1,GhM_A03G0266.1 | AT1G09320 | agenet domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0009507|chloroplast | GhM_A13G0134.1 | 15 | 2 | Gossypium | Cotton | |||
| TA79:GhM_D04G0308.1,GhM_D04G0309.1,GhM_D04G0310.1,GhM_D04G0313.1,GhM_D04G0314.1,GhM_D04G0315.1,GhM_D04G0316.1,GhM_D04G0317.1;TA128:GhM_A05G4625.1,GhM_A05G4626.1,GhM_A05G4629.1,GhM_A05G4631.1,GhM_A05G4632.1,GhM_A05G4634.1,GhM_A05G4635.1 | AT1G49230||AT1G49210 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | - | 15 | 2 | Gossypium | Cotton | |||
| TA1029:GhM_A05G2668.1,GhM_A05G2669.1,GhM_A05G2687.1;TA1942:GhM_D05G2677.1,GhM_D05G2678.1;TA1670:GhM_D02G0813.1,GhM_D02G0822.1 | AT1G77260||AT1G77250||AT2G34300||AT1G29470||AT5G64030||AT2G39750 | dehydration-responsive family protein||PHD finger family protein||dehydration-responsive protein-related | GO:0008150|biological_process;GO:0005515|protein binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0005794|Golgi apparatus;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A02G0832.1,GhM_A02G0816.1,GhM_A02G0817.1,GhM_A12G0928.1,GhM_D05G2693.1,GhM_D12G0866.1,GhM_A10G2827.1,GhM_D10G2791.1 | 15 | 3 | Gossypium | Cotton | |||
| TA229:GhM_D03G1989.1,GhM_D03G1990.1,GhM_D03G1992.1,GhM_D03G1993.1,GhM_D03G1994.1;TA476:GhM_A03G0108.1,GhM_A03G0109.1,GhM_A03G0110.1,GhM_A03G0112.1;TA2958:GhM_A03G0122.1,GhM_A03G0123.1 | AT3G01680||AT3G01670 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0124.1,GhM_D03G1242.1,GhM_D11G0423.1,GhM_A11G0442.1 | 15 | 3 | Gossypium | Cotton | |||
| TA1264:GhM_A11G1858.1,GhM_A11G1859.1;TA2591:GhM_D11G1846.1,GhM_D11G1847.1;TA1416:GhM_A12G2339.1,GhM_A12G2340.1;TA2739:GhM_D12G2234.1,GhM_D12G2235.1 | AT3G02210||AT5G15630||AT5G60920 | COB; COB (COBRA)||COBL1; COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)||COBL4, IRX6; IRX6 | GO:0008150|biological_process;GO:0009834|secondary cell wall biogenesis;GO:0009505|plant-type cell wall;GO:0009825|multidimensional cell growth;GO:0003674|molecular_function;GO:0009897|external side of plasma membrane;GO:0009930|longitudinal side of cell surface;GO:0046658|anchored to plasma membrane;GO:0010215|cellulose microfibril organization;GO:0009651|response to salt stress;GO:0031225|anchored to membrane;GO:0005886|plasma membrane | GhM_A07G2307.1,GhM_D07G2240.1,GhM_D08G0635.1,GhM_A03G0954.1,GhM_A08G0666.1,GhM_D03G1189.1,GhM_D08G0634.1 | 15 | 4 | Gossypium | Cotton | |||
| TA226:GhM_D02G2312.1,GhM_D02G2313.1,GhM_D02G2314.1,GhM_D02G2315.1,GhM_D02G2316.1;TA482:GhM_A03G2287.1,GhM_A03G2288.1,GhM_A03G2289.1,GhM_A03G2291.1;TA1844:GhM_D04G1958.1,GhM_D04G1960.1;TA3094:GhM_A04G1467.1,GhM_A04G1469.1 | AT2G41480||AT5G64120||AT5G39580 | peroxidase, putative||electron carrier/ heme binding / peroxidase | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0050832|defense response to fungus;GO:0020037|heme binding;GO:0006499|N-terminal protein myristoylation;GO:0004601|peroxidase activity;GO:0048046|apoplast;GO:0045730|respiratory burst;GO:0005618|cell wall;GO:0016020|membrane;GO:0009055|electron carrier activity | GhM_A01G0157.1,GhM_D01G0136.1 | 15 | 4 | Gossypium | Cotton | |||
| TA498:GhM_A05G2289.1,GhM_A05G2290.1,GhM_A05G2291.1,GhM_A05G2292.1;TA729:GhM_D05G2307.1,GhM_D05G2308.1,GhM_D05G2309.1;TA2012:GhM_D06G0206.1,GhM_D06G0213.1;TA3264:GhM_A06G0199.1,GhM_A06G0204.1 | AT2G05920||AT5G67090||AT3G14240 | subtilase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0042802|identical protein binding;GO:0043086|negative regulation of catalytic activity;GO:0005618|cell wall;GO:0006508|proteolysis | GhM_A05G2932.1,GhM_D05G2946.1,GhM_A07G0645.1,GhM_D07G0638.1 | 15 | 4 | Gossypium | Cotton | |||
| TA758:GhM_D06G0329.1,GhM_D06G0330.1,GhM_D06G0331.1;TA1051:GhM_A06G0316.1,GhM_A06G0317.1,GhM_A06G0318.1;TA1024:GhM_A05G2429.1,GhM_A05G2430.1,GhM_A05G2431.1;TA1935:GhM_D05G2441.1,GhM_D05G2443.1 | AT5G64460||AT1G09935||AT2G17280 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58280.3); Has 385 Blast hits to 382 proteins in 84 species: Archae - 0; Bacteria - 19; Metazoa - 2; Fungi - 201; Plants - 67; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).||phosphoglycerate/bisphosphoglycerate mutase family protein | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0005575|cellular_component | GhM_A01G1421.1,GhM_A13G0539.1,GhM_D01G1390.1,GhM_D13G0522.1 | 15 | 4 | Gossypium | Cotton | |||
| TA814:GhM_D07G2623.1,GhM_D07G2626.1,GhM_D07G2630.1;TA1079:GhM_A07G2725.1,GhM_A07G2728.1,GhM_A07G2730.1;TA3388:GhM_A07G1828.1,GhM_A07G1829.1;TA2247:GhM_D07G1786.1,GhM_D07G1787.1 | AT3G23220||AT5G43410||AT3G23230 | ethylene-responsive factor, putative||DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A07G2726.1,GhM_A11G1533.1,GhM_D11G1521.1,GhM_A10G1330.1,GhM_D07G2624.1 | 15 | 4 | Gossypium | Cotton | |||
| TA841:GhM_D09G1589.1,GhM_D09G1590.1,GhM_D09G1591.1;TA1112:GhM_A09G1686.1,GhM_A09G1687.1,GhM_A09G1688.1;TA1821:GhM_D04G1129.1,GhM_D04G1130.1;TA3070:GhM_A04G0718.1,GhM_A04G0720.1 | AT2G35930||AT3G11840||AT3G52450 | PUB23; PUB23 (PLANT U-BOX 23); ubiquitin-protein ligase||PUB24; PUB24 (PLANT U-BOX 24); binding / ubiquitin-protein ligase||PUB22; PUB22 (PLANT U-BOX 22); ubiquitin-protein ligase | GO:0010200|response to chitin;GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0006952|defense response;GO:0051865|protein autoubiquitination;GO:0005829|cytosol;GO:0009414|response to water deprivation;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0002679|respiratory burst involved in defense response | GhM_A01G2502.1,GhM_D01G2439.1,GhM_A05G3624.1,GhM_A04G0836.1,GhM_A04G0835.1 | 15 | 4 | Gossypium | Cotton | |||
| TA186:GhM_A06G2623.1,GhM_A06G2624.1,GhM_A06G2625.1,GhM_A06G2626.1,GhM_A06G2627.1,GhM_A06G2628.1;TA3163:GhM_A05G1931.1,GhM_A05G1933.1;TA2090:GhM_D06G2615.1,GhM_D06G2616.1;TA3310:GhM_A06G1978.1,GhM_A06G1980.1;TA2057:GhM_D06G1961.1,GhM_D06G1962.1 | AT4G22030||AT4G04480 | LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G22030.1); Has 51 Blast hits to 51 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A05G1932.1 | 15 | 5 | Gossypium | Cotton | |||
| TA440:GhM_D10G2340.1,GhM_D10G2341.1,GhM_D10G2342.1,GhM_D10G2343.1;TA556:GhM_A10G2412.1,GhM_A10G2413.1,GhM_A10G2414.1;TA458:GhM_D13G0053.1,GhM_D13G0055.1,GhM_D13G0061.1,GhM_D13G0062.1;TA1449:GhM_A13G0050.1,GhM_A13G0051.1;TA1450:GhM_A13G0058.1,GhM_A13G0059.1 | AT1G65570||AT3G59850||AT2G43870 | polygalacturonase, putative / pectinase, putative | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 15 | 5 | Gossypium | Cotton | |||
| TA902:GhM_D11G3824.1,GhM_D11G3825.1,GhM_D11G3826.1;TA993:GhM_A04G0500.1,GhM_A04G0501.1,GhM_A04G0502.1;TA1994:GhM_D05G4244.1,GhM_D05G4247.1;TA1336:GhM_A11G3936.1,GhM_A11G3939.1;TA1978:GhM_D05G3866.1,GhM_D05G3873.1;TA1335:GhM_A11G3935.1,GhM_A11G3938.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_D05G4246.1 | 15 | 6 | Gossypium | Cotton | |||
| - | AT4G38470||AT4G35780 | protein kinase family protein | GO:0008152|metabolic process;GO:0006468|protein amino acid phosphorylation | GhM_A01G0039.1,GhM_D01G0022.1,GhM_A01G0040.1,GhM_D01G2107.1,GhM_A01G2133.1,GhM_A04G1638.1,GhM_D04G2121.1,GhM_D11G1981.1,GhM_A02G2222.1,GhM_D03G0048.1,GhM_A11G1994.1,GhM_D11G1982.1,GhM_A05G2043.1,GhM_D05G2057.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT4G39100||AT4G22140 | DNA binding / protein binding / zinc ion binding||SHL1; SHL1 (short life); transcription factor/ zinc-mediated transcriptional activator | GO:0009845|seed germination;GO:0005515|protein binding;GO:0005634|nucleus;GO:0042156|zinc-mediated transcriptional activator activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009791|post-embryonic development;GO:0009911|positive regulation of flower development;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G0066.1,GhM_D01G0048.1,GhM_A03G2574.1,GhM_D02G2600.1,GhM_A13G0350.1,GhM_D13G0341.1,GhM_D07G2316.1,GhM_A05G1944.1,GhM_D05G1955.1,GhM_A06G1997.1,GhM_A09G0951.1,GhM_A07G2402.1,GhM_D09G0885.1,GhM_D06G1978.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G08390||AT5G23430||AT1G61210 | WD-40 repeat family protein / katanin p80 subunit, putative||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748 species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342; Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI BLink).||transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0005834|heterotrimeric G-protein complex | GhM_A01G0171.1,GhM_D01G0150.1,GhM_A03G2241.1,GhM_D02G2268.1,GhM_A12G0119.1,GhM_A10G0244.1,GhM_A06G2596.1,GhM_D06G2587.1,GhM_D10G0229.1,GhM_D12G0129.1,GhM_A09G0985.1,GhM_D09G0921.1,GhM_A12G0120.1,GhM_D12G0130.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G34850||AT5G19940 | plastid-lipid associated protein PAP-related / fibrillin-related||ATPAP26, PAP26; PAP26 (PURPLE ACID PHOSPHATASE 26); acid phosphatase/ protein serine/threonine phosphatase | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0009941|chloroplast envelope;GO:0055062|phosphate ion homeostasis;GO:0003993|acid phosphatase activity;GO:0005198|structural molecule activity;GO:0004722|protein serine/threonine phosphatase activity;GO:0005773|vacuole | GhM_A01G0597.1,GhM_A13G2126.1,GhM_A05G0730.1,GhM_A12G0473.1,GhM_A10G0872.1,GhM_D09G1676.1,GhM_A10G1427.1,GhM_D06G0614.1,GhM_A06G0619.1,GhM_D13G2542.1,GhM_A06G1215.1,GhM_D06G1241.1,GhM_A13G2638.1,GhM_A12G2496.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G53040||AT1G28240 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0666.1,GhM_D01G0631.1,GhM_A13G1958.1,GhM_A05G1818.1,GhM_D06G1647.1,GhM_A05G1817.1,GhM_D05G1833.1,GhM_A06G1686.1,GhM_A06G2586.1,GhM_D06G2577.1,GhM_A09G0998.1,GhM_D09G0934.1,GhM_D13G1853.1,GhM_D05G4071.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G17240||AT2G03640||AT3G23980 | SDG40; SDG40 (SET DOMAIN GROUP 40)||nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein||unknown protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0006810|transport;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0006913|nucleocytoplasmic transport;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A01G0951.1,GhM_A13G0974.1,GhM_A01G2166.1,GhM_A06G0734.1,GhM_A02G1337.1,GhM_A12G0582.1,GhM_A11G2087.1,GhM_A11G3001.1,GhM_D01G0755.1,GhM_D10G2883.1,GhM_D12G0576.1,GhM_A07G1795.1,GhM_D13G0949.1,GhM_A08G1054.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT4G26510||AT3G27440||AT5G40870||AT3G27190 | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative||ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase||AtUK/UPRT1; AtUK/UPRT1 (Uridine kinase/Uracil phosphoribosyltransferase 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase | GO:0008152|metabolic process;GO:0016773|phosphotransferase activity, alcohol group as acceptor;GO:0005575|cellular_component;GO:0009058|biosynthetic process;GO:0005737|cytoplasm;GO:0004845|uracil phosphoribosyltransferase activity;GO:0004849|uridine kinase activity;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A01G1006.1,GhM_D01G0976.1,GhM_A04G0040.1,GhM_D05G4385.1,GhM_A05G4251.1,GhM_D04G0686.1,GhM_A07G2916.1,GhM_D07G2816.1,GhM_A09G0483.1,GhM_D09G0440.1,GhM_A10G1995.1,GhM_A13G1769.1,GhM_D13G1646.1,GhM_D10G0899.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G76010||AT1G20220 | nucleic acid binding | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0009505|plant-type cell wall;GO:0005575|cellular_component | GhM_A01G1196.1,GhM_D05G2071.1,GhM_A11G0650.1,GhM_A01G2186.1,GhM_D01G2152.1,GhM_A04G1662.1,GhM_D09G0754.1,GhM_A12G1106.1,GhM_D12G1144.1,GhM_D01G1173.1,GhM_D04G2146.1,GhM_D11G0659.1,GhM_A05G2055.1,GhM_D01G0478.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT4G34860||AT4G09510 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative||CINV2; beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative | GO:0008150|biological_process;GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0003824|catalytic activity;GO:0005829|cytosol;GO:0004564|beta-fructofuranosidase activity;GO:0005575|cellular_component | GhM_A01G1220.1,GhM_D01G1193.1,GhM_A03G2626.1,GhM_D02G2645.1,GhM_A05G3088.1,GhM_D05G3087.1,GhM_A09G1487.1,GhM_D09G1393.1,GhM_A11G1145.1,GhM_A08G1704.1,GhM_D08G1652.1,GhM_A13G1648.1,GhM_D13G1528.1,GhM_D11G1161.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G07770||AT5G04670 | RPS15A; RPS15A (ribosomal protein s15a); structural constituent of ribosome||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT4G32620.2); Has 197 Blast hits to 193 proteins in 56 species: Archae - 0; Bacteria - 2; Metazoa - 139; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | GO:0008150|biological_process;GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0003674|molecular_function;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A01G1506.1,GhM_A03G0543.1,GhM_A13G2927.1,GhM_A05G1072.1,GhM_A07G1160.1,GhM_D07G1141.1,GhM_A07G2966.1,GhM_D03G1586.1,GhM_A10G2516.1,GhM_D10G2431.1,GhM_D10G2429.1,GhM_D01G1468.1,GhM_D13G2827.1,GhM_D05G1086.1 | 14 | 0 | Gossypium | Cotton | |||
| - | ATCG00500||ATCG00520 | ACCD; Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.||YCF4; Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. | GO:0051082|unfolded protein binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0048564|photosystem I assembly;GO:0016020|membrane | GhM_A01G1544.1,GhM_Scaf146G297.1,GhM_A07G0002.1,GhM_Scaf280G384.1,GhM_A07G2074.1,GhM_D06G1263.1,GhM_A11G2774.1,GhM_Scaf185G312.1,GhM_A11G2773.1,GhM_A11G1837.1,GhM_A12G1628.1,GhM_A07G2075.1,GhM_Scaf264G375.1,GhM_Scaf270G380.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G14310||AT3G27320 | hydrolase||AtCXE16; AtCXE16 (Arabidopsis thaliana carboxyesterase 16); hydrolase | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0016787|hydrolase activity | GhM_A01G1935.1,GhM_D01G1980.1,GhM_A10G2013.1,GhM_A05G4055.1,GhM_D04G0947.1,GhM_A07G2895.1,GhM_D07G2798.1,GhM_A09G0451.1,GhM_D09G0412.1,GhM_A10G2012.1,GhM_D10G0916.1,GhM_A11G0758.1,GhM_D11G0771.1,GhM_D11G0804.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT3G49430||AT1G09140||AT4G02430 | pre-mRNA splicing factor, putative / SR1 protein, putative||SF2/ASF-like splicing modulator (SRP30)||SRp34a; SRp34a (Ser/Arg-rich protein 34a); RNA binding / nucleic acid binding / nucleotide binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000245|spliceosome assembly;GO:0005681|spliceosomal complex;GO:0000166|nucleotide binding;GO:0008380|RNA splicing;GO:0006376|mRNA splice site selection;GO:0003729|mRNA binding;GO:0005730|nucleolus;GO:0003676|nucleic acid binding;GO:0016607|nuclear speck;GO:0048024|regulation of nuclear mRNA splicing, via spliceosome;GO:0035061|interchromatin granule;GO:0005575|cellular_component | GhM_A01G2203.1,GhM_D01G2171.1,GhM_A09G2262.1,GhM_D09G2168.1,GhM_A11G0181.1,GhM_D11G0179.1,GhM_A13G1500.1,GhM_D13G2225.1,GhM_A13G2334.1,GhM_D10G1055.1,GhM_A11G1344.1,GhM_D11G1342.1,GhM_D13G2203.1,GhM_D13G1383.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G36830||AT4G01470 | GAMMA-TIP, TIP1;1, GAMMA-TIP1; GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN); water channel||GAMMA-TIP3, TIP1;3; TIP1;3 (TONOPLAST INTRINSIC PROTEIN 1;3); urea transmembrane transporter/ water channel | GO:0015250|water channel activity;GO:0009941|chloroplast envelope;GO:0006810|transport;GO:0009740|gibberellic acid mediated signaling pathway;GO:0006833|water transport;GO:0009651|response to salt stress;GO:0042807|central vacuole;GO:0015204|urea transmembrane transporter activity;GO:0000326|protein storage vacuole;GO:0005886|plasma membrane;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0015840|urea transport;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A01G2636.1,GhM_D01G2561.1,GhM_A03G0537.1,GhM_D03G1595.1,GhM_A04G0927.1,GhM_D04G1380.1,GhM_A05G1078.1,GhM_D05G1091.1,GhM_A10G2709.1,GhM_D10G2649.1,GhM_A11G4061.1,GhM_D11G3958.1,GhM_A13G2931.1,GhM_D13G2831.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G38080||AT5G58910 | LAC16; LAC16 (laccase 16); laccase||IRX12, LAC4; IRX12 (IRREGULAR XYLEM 12); laccase | GO:0012505|endomembrane system;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0046274|lignin catabolic process | GhM_A01G2789.1,GhM_D01G2714.1,GhM_A03G0665.1,GhM_D03G1441.1,GhM_A05G0992.1,GhM_D05G1009.1,GhM_A11G4123.1,GhM_A05G3487.1,GhM_D05G3436.1,GhM_A10G2892.1,GhM_D10G2871.1,GhM_D04G1625.1,GhM_D11G4013.1,GhM_D05G3460.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G20670||AT1G76380||AT1G07990 | SIT4 phosphatase-associated family protein||DNA-binding bromodomain-containing protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component;GO:0012505|endomembrane system | GhM_A02G0009.1,GhM_D02G0018.1,GhM_D05G3518.1,GhM_D04G0360.1,GhM_D05G3519.1,GhM_A03G0467.1,GhM_D03G1663.1,GhM_A05G1143.1,GhM_D05G1160.1,GhM_A08G2574.1,GhM_D08G2512.1,GhM_A13G2948.1,GhM_D13G2851.1,GhM_D11G2659.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G46170||AT4G11220||AT1G64090||AT4G23630 | BTI2; BTI2 (VIRB2-INTERACTING PROTEIN 2)||reticulon family protein (RTNLB3)||reticulon family protein (RTNLB5)||BTI1; BTI1 (VIRB2-INTERACTING PROTEIN 1) | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum;GO:0005773|vacuole | GhM_A02G1297.1,GhM_D03G0944.1,GhM_A08G1539.1,GhM_D08G1494.1,GhM_A08G1737.1,GhM_A07G1716.1,GhM_D07G1684.1,GhM_A11G1078.1,GhM_D08G1693.1,GhM_A09G2322.1,GhM_D09G2224.1,GhM_A12G2883.1,GhM_D12G2772.1,GhM_D11G1091.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT3G13870||AT5G45160 | RHD3; RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding||root hair defective 3 GTP-binding (RHD3) family protein | GO:0010053|root epidermal cell differentiation;GO:0005525|GTP binding;GO:0005737|cytoplasm;GO:0030036|actin cytoskeleton organization;GO:0009932|cell tip growth;GO:0009832|plant-type cell wall biogenesis;GO:0005886|plasma membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005783|endoplasmic reticulum | GhM_A02G1507.1,GhM_D03G0624.1,GhM_A05G1515.1,GhM_D05G1530.1,GhM_A06G2471.1,GhM_D06G2469.1,GhM_A09G1088.1,GhM_D09G1023.1,GhM_A10G0517.1,GhM_A06G1841.1,GhM_D10G0491.1,GhM_D06G1853.1,GhM_A06G1840.1,GhM_D06G1854.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G48120||AT2G04865||AT1G17930 | unknown protein||calcineurin-like phosphoesterase family protein | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0003674|molecular_function;GO:0004722|protein serine/threonine phosphatase activity;GO:0005575|cellular_component | GhM_A02G1607.1,GhM_A03G0528.1,GhM_A03G2045.1,GhM_A09G1728.1,GhM_A04G0990.1,GhM_A13G0669.1,GhM_A07G1898.1,GhM_A04G1151.1,GhM_A03G1734.1,GhM_A04G1264.1,GhM_D06G2059.1,GhM_A05G0842.1,GhM_A07G1463.1,GhM_Scaf240G368.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT4G11420||AT5G56500 | ATP binding / protein binding||EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1; EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A); translation initiation factor | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003743|translation initiation factor activity;GO:0005852|eukaryotic translation initiation factor 3 complex;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0044267|cellular protein metabolic process;GO:0006457|protein folding;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0006413|translational initiation;GO:0005524|ATP binding | GhM_A02G1676.1,GhM_A11G3802.1,GhM_A02G1804.1,GhM_A02G1677.1,GhM_A10G2354.1,GhM_A11G3803.1,GhM_A08G2664.1,GhM_A13G1634.1,GhM_A08G2671.1,GhM_D08G2615.1,GhM_A11G3368.1,GhM_D11G3280.1,GhM_D11G3303.1,GhM_D11G3305.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G10360||AT4G31700 | RPS6; RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome||EMB3010; EMB3010 (embryo defective 3010); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0009793|embryonic development ending in seed dormancy;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A02G1704.1,GhM_D03G0423.1,GhM_A03G2315.1,GhM_A04G1484.1,GhM_D04G1974.1,GhM_A06G0387.1,GhM_A11G2403.1,GhM_D11G2481.1,GhM_A12G0990.1,GhM_D12G0925.1,GhM_A13G0810.1,GhM_D13G0576.1,GhM_D05G4054.1,GhM_D02G2344.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G45140 | PVA12; PVA12 (PLANT VAP HOMOLOG 12); structural molecule | GO:0005634|nucleus;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0005783|endoplasmic reticulum | GhM_A03G0164.1,GhM_D03G1932.1,GhM_A09G2384.1,GhM_D09G2272.1,GhM_A11G0302.1,GhM_A08G0396.1,GhM_D08G0384.1,GhM_A11G0913.1,GhM_D11G0928.1,GhM_D11G0287.1,GhM_A12G2725.1,GhM_D12G2612.1,GhM_D08G1790.1,GhM_A08G1841.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G56350||AT5G08570 | pyruvate kinase, putative | GO:0000287|magnesium ion binding;GO:0003824|catalytic activity;GO:0030955|potassium ion binding;GO:0005575|cellular_component;GO:0006096|glycolysis;GO:0004743|pyruvate kinase activity | GhM_A03G0344.1,GhM_D03G1781.1,GhM_A03G2238.1,GhM_D02G2264.1,GhM_A08G1038.1,GhM_D08G1003.1,GhM_A13G0736.1,GhM_A10G2438.1,GhM_D10G2367.1,GhM_D13G0645.1,GhM_A13G2737.1,GhM_A13G1371.1,GhM_D13G1272.1,GhM_D13G2629.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G50860||AT1G54610 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G0738.1,GhM_D03G1367.1,GhM_A07G0593.1,GhM_D07G0582.1,GhM_A10G1182.1,GhM_D10G1947.1,GhM_A11G3233.1,GhM_A08G2741.1,GhM_D08G2684.1,GhM_A13G2301.1,GhM_D13G2188.1,GhM_D11G3155.1,GhM_D09G2869.1,GhM_A09G3009.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G13950||AT1G69410 | ATELF5A-3, ELF5A-3; ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3); translation initiation factor||EIF-5A, ELF5A-1, ATELF5A-1, EIF5A; ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1); translation initiation factor | GO:0010089|xylem development;GO:0006413|translational initiation;GO:0005575|cellular_component;GO:0003743|translation initiation factor activity | GhM_A03G0911.1,GhM_A11G0411.1,GhM_A03G1384.1,GhM_D02G1510.1,GhM_A07G0836.1,GhM_D07G0836.1,GhM_A09G2958.1,GhM_D03G1153.1,GhM_A12G2102.1,GhM_D12G2004.1,GhM_A12G2297.1,GhM_D12G2189.1,GhM_D09G2818.1,GhM_D11G0394.1 | 14 | 0 | Gossypium | Cotton | |||
| - | ATCG00890 | NDHB.1; NADH dehydrogenase ND2 | GO:0012505|endomembrane system;GO:0042773|ATP synthesis coupled electron transport;GO:0008137|NADH dehydrogenase (ubiquinone) activity | GhM_A03G1155.1,GhM_A09G0680.1,GhM_A05G0986.1,GhM_D01G1232.1,GhM_A08G0984.1,GhM_A04G0536.1,GhM_D08G1677.1,GhM_A09G1237.1,GhM_Scaf034G160.1,GhM_A13G1129.1,GhM_D02G1080.1,GhM_D11G3382.1,GhM_D03G1125.1,GhM_A09G1334.1 | 14 | 0 | Gossypium | Cotton | |||
| - | ATCG00790 | RPL16; chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit | GO:0009507|chloroplast | GhM_A03G2175.1,GhM_D02G1379.1,GhM_A04G0587.1,GhM_A12G0265.1,GhM_A05G1615.1,GhM_A13G1124.1,GhM_A06G1699.1,GhM_A12G0953.1,GhM_A12G2281.1,GhM_D01G2051.1,GhM_D01G1503.1,GhM_D12G1064.1,GhM_D08G0084.1,GhM_D09G1195.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G20120||AT2G18460||AT1G43130 | LCV3; LCV3 (like cov 3)||LCV2; LCV2 (LIKE COV 2)||COV1; COV1 (CONTINUOUS VASCULAR RING) | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016021|integral to membrane;GO:0010222|stem vascular tissue pattern formation;GO:0005575|cellular_component | GhM_A05G0260.1,GhM_D06G0754.1,GhM_A05G2903.1,GhM_D05G2915.1,GhM_A06G0754.1,GhM_D13G2494.1,GhM_A07G0073.1,GhM_D07G0071.1,GhM_A10G0942.1,GhM_D10G1142.1,GhM_A12G1105.1,GhM_D12G1145.1,GhM_A13G2581.1,GhM_D05G0269.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G17455||AT2G06255||AT1G72630 | ELF4-L2; ELF4-L2 (ELF4-Like 2)||ELF4-L4; ELF4-L4 (ELF4-Like 4)||ELF4-L3; ELF4-L3 (ELF4-Like 3) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0356.1,GhM_D05G0374.1,GhM_A05G1570.1,GhM_D05G1584.1,GhM_A06G0898.1,GhM_D06G0908.1,GhM_A07G0168.1,GhM_D07G0167.1,GhM_A13G2529.1,GhM_D13G2443.1,GhM_A08G3154.1,GhM_D08G3079.1,GhM_A10G0592.1,GhM_D10G0565.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT3G14205||AT3G43220 | phosphoinositide phosphatase family protein | GO:0008150|biological_process;GO:0004439|phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity;GO:0005575|cellular_component | GhM_A05G1540.1,GhM_D05G1554.1,GhM_A05G1542.1,GhM_D10G0546.1,GhM_A06G2496.1,GhM_D06G2494.1,GhM_A10G0570.1,GhM_D04G1243.1,GhM_A06G0963.1,GhM_D06G0971.1,GhM_A07G0202.1,GhM_D07G0202.1,GhM_A13G2504.1,GhM_D13G2407.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G47780||AT4G17170||AT4G35860 | ATRABB1B, ATGB2, ATRAB2C; ATGB2 (GTP-BINDING 2); GTP binding||AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C, ATRAB-B1B, RAB-B1B; RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C); GTP binding / GTPase||GAUT4; GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | GO:0012505|endomembrane system;GO:0015031|protein transport;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0009507|chloroplast;GO:0016051|carbohydrate biosynthetic process;GO:0048235|pollen sperm cell differentiation;GO:0016049|cell growth;GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005773|vacuole | GhM_A05G1988.1,GhM_D05G1998.1,GhM_A06G2072.1,GhM_D06G2056.1,GhM_A07G2048.1,GhM_D07G1988.1,GhM_A07G2508.1,GhM_D07G2405.1,GhM_A07G2880.1,GhM_D07G2786.1,GhM_A09G0411.1,GhM_D09G0377.1,GhM_A10G1174.1,GhM_D10G0923.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G66430||AT5G51830||AT4G10260||AT3G59480 | pfkB-type carbohydrate kinase family protein | GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0009507|chloroplast;GO:0004747|ribokinase activity;GO:0046686|response to cadmium ion;GO:0016301|kinase activity;GO:0006014|D-ribose metabolic process;GO:0009570|chloroplast stroma;GO:0005986|sucrose biosynthetic process;GO:0019654|acetate fermentation;GO:0005575|cellular_component | GhM_A07G0927.1,GhM_D07G0926.1,GhM_A09G2183.1,GhM_D09G2097.1,GhM_A12G3211.1,GhM_D12G3099.1,GhM_D01G1041.1,GhM_D02G1082.1,GhM_A07G2598.1,GhM_D07G2501.1,GhM_A10G1721.1,GhM_A09G2560.1,GhM_D09G2440.1,GhM_D10G1405.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT1G03960||AT5G28850||AT5G44090||AT1G54450 | calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative||calcium-binding EF hand family protein||calcium-binding EF-hand family protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005509|calcium ion binding;GO:0005739|mitochondrion;GO:0005575|cellular_component | GhM_A07G1854.1,GhM_D07G1815.1,GhM_A07G2753.1,GhM_D07G2654.1,GhM_A08G2782.1,GhM_D08G2726.1,GhM_A10G1306.1,GhM_A09G2799.1,GhM_D10G1809.1,GhM_A11G3097.1,GhM_D11G3029.1,GhM_A13G2243.1,GhM_D13G2133.1,GhM_D09G2675.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT2G44610||AT5G10260 | RAB6, ATRABH1B, ATRAB6A, RAB6A; RAB6A; GTP binding / protein binding||AtRABH1e; AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding | GO:0005515|protein binding;GO:0005525|GTP binding;GO:0032940|secretion by cell;GO:0005624|membrane fraction;GO:0005886|plasma membrane;GO:0015031|protein transport | GhM_A08G0373.1,GhM_D08G0361.1,GhM_A08G0713.1,GhM_D08G0680.1,GhM_A11G0629.1,GhM_D11G0637.1,GhM_A11G2368.1,GhM_D11G2524.1,GhM_A12G0987.1,GhM_D12G0921.1,GhM_A12G1324.1,GhM_D12G1260.1,GhM_A11G0861.1,GhM_D11G0876.1 | 14 | 0 | Gossypium | Cotton | |||
| - | AT5G18900||AT3G21510||AT1G03430 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||AHP1; AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase||AHP5; AHP5 (HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5); histidine phosphotransfer kinase | GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0019538|protein metabolic process;GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005737|cytoplasm;GO:0000160|two-component signal transduction system (phosphorelay);GO:0005506|iron ion binding;GO:0009927|histidine phosphotransfer kinase activity;GO:0016491|oxidoreductase activity | GhM_A09G2837.1,GhM_D09G2711.1,GhM_A10G1213.1,GhM_D10G1912.1,GhM_A10G1214.1,GhM_D10G1911.1,GhM_A11G3274.1,GhM_A11G1401.1,GhM_D11G1391.1,GhM_D11G3199.1,GhM_A13G2312.1,GhM_D13G2199.1,GhM_D12G0076.1,GhM_A12G0072.1 | 14 | 0 | Gossypium | Cotton | |||
| TA1711:GhM_D02G2577.1,GhM_D02G2578.1 | AT2G21600||AT4G39220 | ATRER1A; ATRER1A||ATRER1B; ATRER1B | GO:0003674|molecular_function;GO:0005801|cis-Golgi network;GO:0006890|retrograde vesicle-mediated transport, Golgi to ER;GO:0005794|Golgi apparatus;GO:0005783|endoplasmic reticulum | GhM_A01G0069.1,GhM_A02G2001.1,GhM_A02G2135.1,GhM_A03G2551.1,GhM_A06G0096.1,GhM_A12G0320.1,GhM_A13G0375.1,GhM_D12G0319.1,GhM_D13G0358.1,GhM_D06G0093.1,GhM_D03G0132.1,GhM_D03G0266.1 | 14 | 1 | Gossypium | Cotton | |||
| TA2236:GhM_D07G1292.1,GhM_D07G1293.1 | AT1G15060||AT1G73750 | LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73750.1); Has 120 Blast hits to 104 proteins in 29 species: Archae - 0; Bacteria - 61; Metazoa - 1; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).||EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15060.1); Has 121 Blast hits to 101 proteins in 28 species: Archae - 0; Bacteria - 44; Metazoa - 8; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | ;GO:0009507|chloroplast | GhM_A07G1297.1,GhM_A09G1122.1,GhM_D01G2491.1,GhM_D09G2350.1,GhM_D12G0672.1,GhM_D11G1707.1,GhM_A04G1290.1,GhM_A05G3788.1,GhM_A09G0725.1,GhM_D04G1772.1,GhM_D05G3758.1,GhM_D09G0669.1 | 14 | 1 | Gossypium | Cotton | |||
| TA2560:GhM_D11G0618.1,GhM_D11G0630.1 | AT5G65270||AT3G12160||AT5G47960||AT5G59150 | AtRABA4a; AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding||SMG1, ATRABA4C; ATRABA4C; GTP binding||ATRABA4D, RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP binding||ATRABA2D, ATRAB-A2D; ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding | GO:0009860|pollen tube growth;GO:0012505|endomembrane system;GO:0005525|GTP binding;GO:0009504|cell plate;GO:0045177|apical part of cell;GO:0005768|endosome;GO:0048868|pollen tube development;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0016020|membrane | GhM_A01G1604.1,GhM_A02G1702.1,GhM_A08G1964.1,GhM_A11G0621.1,GhM_A11G2401.1,GhM_D01G1569.1,GhM_D03G0421.1,GhM_D08G1907.1,GhM_D09G1493.1,GhM_D11G2484.1,GhM_D03G1478.1,GhM_A03G0638.1 | 14 | 1 | Gossypium | Cotton | |||
| TA2998:GhM_A03G1145.1,GhM_A03G1148.1 | ATCG00770 | RPS8; chloroplast 30S ribosomal protein S8 | GO:0009507|chloroplast;GO:0016020|membrane | GhM_A08G0800.1,GhM_D02G2834.1,GhM_Scaf003G067.1,GhM_Scaf005G085.1,GhM_Scaf297G391.1,GhM_A12G0267.1,GhM_A06G0671.1,GhM_A05G4718.1,GhM_A12G0955.1,GhM_D11G3534.1,GhM_D13G1490.1,GhM_D08G2249.1 | 14 | 1 | Gossypium | Cotton | |||
| TA655:GhM_D01G1628.1,GhM_D01G1632.1,GhM_D01G1633.1 | - | - | - | GhM_A03G1223.1,GhM_A04G0701.1,GhM_A10G1394.1,GhM_A13G1258.1,GhM_D11G2668.1,GhM_D11G2500.1,GhM_D02G1428.1,GhM_D07G2129.1,GhM_D02G1295.1,GhM_D12G0870.1,GhM_D02G1670.1 | 14 | 1 | Gossypium | Cotton | |||
| TA110:GhM_D03G0996.1,GhM_D03G0997.1,GhM_D03G0998.1,GhM_D03G0999.1,GhM_D03G1000.1,GhM_D03G1001.1,GhM_D03G1004.1;TA122:GhM_A02G1236.1,GhM_A02G1238.1,GhM_A02G1243.1,GhM_A02G1244.1,GhM_A02G1246.1,GhM_A02G1247.1,GhM_A02G1248.1 | AT5G53110||AT2G46494 | ||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G46495.1); Has 118 Blast hits to 116 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system; | - | 14 | 2 | Gossypium | Cotton | |||
| TA1156:GhM_A10G0883.1,GhM_A10G0884.1;TA3594:GhM_Scaf046G181.1,GhM_Scaf046G182.1 | AT1G52360||AT1G79990 | coatomer protein complex, subunit beta 2 (beta prime), putative||LOCATED IN: endomembrane system, COPI vesicle coat, Golgi membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SYS1 homologue (InterPro:IPR016973); Has 55556 Blast hits to 24059 proteins in 620 species: Archae - 38; Bacteria - 5697; Metazoa - 25539; Fungi - 10898; Plants - 5309; Viruses - 0; Other Eukaryotes - 8075 (source: NCBI BLink). | GO:0005515|protein binding;GO:0030117|membrane coat;GO:0016192|vesicle-mediated transport;GO:0030126|COPI vesicle coat;GO:0000139|Golgi membrane;GO:0006886|intracellular protein transport;GO:0005198|structural molecule activity | GhM_A02G1594.1,GhM_A02G1595.1,GhM_A02G1596.1,GhM_A02G1597.1,GhM_A05G1413.1,GhM_A09G1121.1,GhM_D05G1427.1,GhM_D09G1050.1,GhM_D03G0810.1,GhM_D03G0811.1 | 14 | 2 | Gossypium | Cotton | |||
| TA125:GhM_A05G3416.1,GhM_A05G3418.1,GhM_A05G3420.1,GhM_A05G3421.1,GhM_A05G3422.1,GhM_A05G3423.1,GhM_A05G3425.1;TA149:GhM_D05G3390.1,GhM_D05G3391.1,GhM_D05G3392.1,GhM_D05G3393.1,GhM_D05G3394.1,GhM_D05G3395.1 | AT5G15500||AT1G14480 | ankyrin repeat family protein||protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A05G3417.1 | 14 | 2 | Gossypium | Cotton | |||
| TA129:GhM_A06G0198.1,GhM_A06G0200.1,GhM_A06G0201.1,GhM_A06G0202.1,GhM_A06G0205.1,GhM_A06G0206.1,GhM_A06G0207.1;TA240:GhM_D06G0205.1,GhM_D06G0208.1,GhM_D06G0209.1,GhM_D06G0210.1,GhM_D06G0214.1 | AT5G07850||AT5G07870||AT5G42830 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups | GhM_A01G0527.1,GhM_A08G0526.1 | 14 | 2 | Gossypium | Cotton | |||
| TA252:GhM_D08G1858.1,GhM_D08G1859.1,GhM_D08G1865.1,GhM_D08G1867.1,GhM_D08G1868.1;TA303:GhM_A08G1904.1,GhM_A08G1908.1,GhM_A08G1910.1,GhM_A08G1911.1,GhM_A08G1914.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_D08G0674.1,GhM_A08G0707.1,GhM_A08G1905.1,GhM_A08G1913.1 | 14 | 2 | Gossypium | Cotton | |||
| TA426:GhM_D09G0290.1,GhM_D09G0292.1,GhM_D09G0293.1,GhM_D09G0295.1;TA525:GhM_A09G0317.1,GhM_A09G0318.1,GhM_A09G0319.1,GhM_A09G0321.1 | AT5G15020 | SNL2; SNL2 (SIN3-LIKE 2) | GO:0005634|nucleus;GO:0003674|molecular_function;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G4327.1,GhM_A11G0791.1,GhM_D11G0811.1,GhM_D04G0611.1,GhM_A12G0654.1,GhM_D12G0655.1 | 14 | 2 | Gossypium | Cotton | |||
| TA462:GhM_D13G0605.1,GhM_D13G0608.1,GhM_D13G0609.1,GhM_D13G0610.1;TA624:GhM_A13G0777.1,GhM_A13G0778.1,GhM_A13G0780.1 | AT4G33430||AT1G34210||AT1G71830 | BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1; BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase||SERK2, ATSERK2; SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase||SERK1, ATSERK1; SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase | GO:0009742|brassinosteroid mediated signaling pathway;GO:0010152|pollen maturation;GO:0006468|protein amino acid phosphorylation;GO:0008219|cell death;GO:0005886|plasma membrane;GO:0010227|floral organ abscission;GO:0004674|protein serine/threonine kinase activity;GO:0002229|defense response to oomycetes;GO:0005768|endosome;GO:0016301|kinase activity;GO:0050832|defense response to fungus;GO:0009793|embryonic development ending in seed dormancy;GO:0009556|microsporogenesis;GO:0016049|cell growth;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0043234|protein complex;GO:0046982|protein heterodimerization activity;GO:0005515|protein binding;GO:0046777|protein amino acid autophosphorylation;GO:0042742|defense response to bacterium;GO:0007030|Golgi organization | GhM_D13G0607.1,GhM_A03G2277.1,GhM_A04G1464.1,GhM_A06G1448.1,GhM_D02G2301.1,GhM_D04G1955.1,GhM_D06G1394.1 | 14 | 2 | Gossypium | Cotton | |||
| TA65:GhM_A08G2501.1,GhM_A08G2502.1,GhM_A08G2503.1,GhM_A08G2504.1,GhM_A08G2505.1,GhM_A08G2508.1,GhM_A08G2509.1,GhM_A08G2510.1,GhM_A08G2511.1;TA254:GhM_D08G2445.1,GhM_D08G2446.1,GhM_D08G2448.1,GhM_D08G2449.1,GhM_D08G2450.1 | AT5G12060||AT4G29035||AT1G04645||AT4G16295 | self-incompatibility protein-related||SPH1; SPH1 (S-PROTEIN HOMOLOGUE 1)||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: SPH1 (S-PROTEIN HOMOLOGUE 1) (TAIR:AT4G16295.1); Has 58 Blast hits to 57 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0009875|pollen-pistil interaction;GO:0008150|biological_process;GO:0003674|molecular_function | - | 14 | 2 | Gossypium | Cotton | |||
| TA69:GhM_A11G3280.1,GhM_A11G3281.1,GhM_A11G3282.1,GhM_A11G3283.1,GhM_A11G3286.1,GhM_A11G3288.1,GhM_A11G3289.1,GhM_A11G3291.1;TA271:GhM_D11G3205.1,GhM_D11G3206.1,GhM_D11G3209.1,GhM_D11G3210.1,GhM_D11G3211.1 | AT1G54730||AT4G04750 | carbohydrate transmembrane transporter/ sugar:hydrogen symporter||sugar transporter, putative | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0055085|transmembrane transport;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane | GhM_A13G1243.1 | 14 | 2 | Gossypium | Cotton | |||
| TA767:GhM_D06G2092.1,GhM_D06G2093.1,GhM_D06G2097.1;TA1063:GhM_A06G2114.1,GhM_A06G2115.1,GhM_A06G2117.1 | AT2G40370||AT2G30210||AT5G07130||AT5G05390 | LAC13; LAC13 (laccase 13); laccase||LAC3; LAC3 (laccase 3); laccase||LAC12; LAC12 (laccase 12); laccase||LAC5; LAC5 (laccase 5); laccase | GO:0012505|endomembrane system;GO:0046688|response to copper ion;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0046274|lignin catabolic process | GhM_A05G3504.1,GhM_A03G0387.1,GhM_D10G2935.1,GhM_A10G2985.1,GhM_D08G2568.1,GhM_D03G1738.1,GhM_D05G3452.1,GhM_D05G3453.1 | 14 | 2 | Gossypium | Cotton | |||
| TA81:GhM_D05G3397.1,GhM_D05G3398.1,GhM_D05G3399.1,GhM_D05G3404.1,GhM_D05G3405.1,GhM_D05G3406.1,GhM_D05G3407.1,GhM_D05G3408.1;TA181:GhM_A05G3428.1,GhM_A05G3429.1,GhM_A05G3433.1,GhM_A05G3434.1,GhM_A05G3436.1,GhM_A05G3438.1 | AT2G39490||AT5G02700||AT5G56440 | F-box family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 14 | 2 | Gossypium | Cotton | |||
| TA177:GhM_A04G1834.1,GhM_A04G1836.1,GhM_A04G1837.1,GhM_A04G1839.1,GhM_A04G1840.1,GhM_A04G1842.1;TA232:GhM_D04G2310.1,GhM_D04G2311.1,GhM_D04G2312.1,GhM_D04G2314.1,GhM_D04G2315.1;TA3110:GhM_A04G1838.1,GhM_A04G1841.1 | AT4G14390||AT4G03490||AT4G05040 | ankyrin repeat family protein||protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G1844.1 | 14 | 3 | Gossypium | Cotton | |||
| TA1929:GhM_D05G2179.1,GhM_D05G2184.1;TA3189:GhM_A05G2898.1,GhM_A05G2901.1;TA1950:GhM_D05G2909.1,GhM_D05G2913.1 | AT1G75250||AT4G39250||AT2G21650||AT1G19510 | MEE3, ATRL2; MEE3 (MATERNAL EFFECT EMBRYO ARREST 3); DNA binding / transcription factor||ATRL5; ATRL5 (ARABIDOPSIS RAD-LIKE 5); DNA binding / transcription factor||ATRL1; ATRL1 (ARABIDOPSIS RAD-LIKE 1); DNA binding / transcription factor||ATRL6; ATRL6 (ARABIDOPSIS RAD-LIKE 6); transcription factor | GO:0045449|regulation of transcription;GO:0009793|embryonic development ending in seed dormancy;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A01G1279.1,GhM_A04G1622.1,GhM_A05G2156.1,GhM_D04G2102.1,GhM_A06G0104.1,GhM_A10G1093.1,GhM_D06G0101.1,GhM_D10G1001.1 | 14 | 3 | Gossypium | Cotton | |||
| TA2325:GhM_D08G1904.1,GhM_D08G1909.1;TA3557:GhM_A09G1600.1,GhM_A09G1603.1;TA2407:GhM_D09G1500.1,GhM_D09G1502.1 | AT5G26880||AT5G48060||AT5G06850||AT3G57880||AT5G12970||AT4G11610 | C2 domain-containing protein||tRNA/rRNA methyltransferase (SpoU) family protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0003674|molecular_function;GO:0008173|RNA methyltransferase activity;GO:0000162|tryptophan biosynthetic process;GO:0005618|cell wall;GO:0006396|RNA processing;GO:0005575|cellular_component;GO:0005783|endoplasmic reticulum | GhM_A08G1961.1,GhM_A06G1457.1,GhM_A08G1967.1,GhM_A13G2786.1,GhM_D06G1382.1,GhM_A08G2370.1,GhM_D08G2314.1,GhM_D13G2675.1 | 14 | 3 | Gossypium | Cotton | |||
| TA249:GhM_D07G1200.1,GhM_D07G1201.1,GhM_D07G1206.1,GhM_D07G1207.1,GhM_D07G1210.1;TA298:GhM_A07G1217.1,GhM_A07G1218.1,GhM_A07G1223.1,GhM_A07G1224.1,GhM_A07G1226.1;TA751:GhM_D05G4377.1,GhM_D05G4378.1,GhM_D05G4380.1 | AT3G11340||AT3G46670||AT5G59590 | UGT76E2; UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase||UGT76E11; UGT76E11 (UDP-GLUCOSYL TRANSFERASE 76E11); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A04G0043.1 | 14 | 3 | Gossypium | Cotton | |||
| TA418:GhM_D08G2209.1,GhM_D08G2210.1,GhM_D08G2211.1,GhM_D08G2212.1;TA921:GhM_D12G2640.1,GhM_D12G2641.1,GhM_D12G2642.1;TA612:GhM_A12G2755.1,GhM_A12G2756.1,GhM_A12G2757.1 | AT4G25260||AT5G62350||AT1G62760||AT4G12390 | PME1; PME1 (PECTIN METHYLESTERASE INHIBITOR 1); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor||invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)||invertase/pectin methylesterase inhibitor family protein | GO:0012505|endomembrane system;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0009641|shade avoidance;GO:0030599|pectinesterase activity | GhM_A03G0190.1,GhM_A08G2259.1,GhM_A09G2372.1,GhM_D03G1909.1 | 14 | 3 | Gossypium | Cotton | |||
| TA748:GhM_D05G4248.1,GhM_D05G4257.1,GhM_D05G4258.1;TA3045:GhM_A04G0148.1,GhM_A04G0159.1;TA3516:GhM_A09G0290.1,GhM_A09G0291.1 | AT5G15110||AT1G14420 | AT59; AT59; lyase/ pectate lyase||lyase/ pectate lyase | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0009664|plant-type cell wall organization;GO:0030570|pectate lyase activity;GO:0016829|lyase activity | GhM_A01G0609.1,GhM_A03G2364.1,GhM_D01G0571.1,GhM_D09G0262.1,GhM_A11G0799.1,GhM_D11G0818.1,GhM_D02G2382.1 | 14 | 3 | Gossypium | Cotton | |||
| TA85:GhM_D10G2846.1,GhM_D10G2847.1,GhM_D10G2849.1,GhM_D10G2850.1,GhM_D10G2852.1,GhM_D10G2855.1,GhM_D10G2856.1,GhM_D10G2857.1;TA2527:GhM_D10G2831.1,GhM_D10G2837.1;TA322:GhM_A10G2857.1,GhM_A10G2858.1,GhM_A10G2859.1,GhM_A10G2870.1 | AT4G12560||AT3G06240||AT3G52320||AT5G42430||AT1G32420 | F-box family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0006499|N-terminal protein myristoylation;GO:0005737|cytoplasm;GO:0031348|negative regulation of defense response;GO:0005575|cellular_component | - | 14 | 3 | Gossypium | Cotton | |||
| TA1256:GhM_A11G1328.1,GhM_A11G1329.1;TA2581:GhM_D11G1329.1,GhM_D11G1330.1;TA1399:GhM_A12G1676.1,GhM_A12G1679.1;TA2722:GhM_D12G1624.1,GhM_D12G1627.1 | AT4G02320||AT1G02810 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A07G1528.1,GhM_A12G1677.1,GhM_D07G1495.1,GhM_A08G0971.1,GhM_A08G0972.1,GhM_D08G0929.1 | 14 | 4 | Gossypium | Cotton | |||
| TA1484:GhM_A13G0958.1,GhM_A13G0959.1;TA3113:GhM_A04G1904.1,GhM_A04G1905.1;TA1867:GhM_D04G2374.1,GhM_D04G2375.1;TA2798:GhM_D13G0964.1,GhM_D13G0966.1 | AT1G69120||AT5G15800||AT2G03710||AT5G60910 | SEP1, AGL2; SEP1 (SEPALLATA1); DNA binding / transcription factor||SEP4, AGL3; SEP4 (SEPALLATA 4); DNA binding / transcription factor||AP1, AGL7; AP1 (APETALA1); DNA binding / protein binding / protein heterodimerization/ transcription activator/ transcription factor||AGL8, FUL; AGL8 (agamous-like 8); transcription factor | GO:0009933|meristem structural organization;GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0009908|flower development;GO:0045941|positive regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0010154|fruit development;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010076|maintenance of floral meristem identity;GO:0048441|petal development;GO:0048442|sepal development;GO:0048443|stamen development;GO:0046982|protein heterodimerization activity;GO:0009911|positive regulation of flower development;GO:0048440|carpel development;GO:0048481|ovule development | GhM_A03G1422.1,GhM_A07G0804.1,GhM_D02G1549.1,GhM_A03G0957.1,GhM_D03G1192.1,GhM_D07G0803.1 | 14 | 4 | Gossypium | Cotton | |||
| TA1828:GhM_D04G1482.1,GhM_D04G1486.1;TA3078:GhM_A04G1031.1,GhM_A04G1034.1;TA2421:GhM_D09G1875.1,GhM_D09G1876.1;TA3570:GhM_A09G1977.1,GhM_A09G1978.1 | AT5G60070||AT3G09550||AT1G07710||AT3G12360 | ankyrin repeat family protein||ITN1; ITN1 (INCREASED TOLERANCE TO NACL); protein binding||protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A06G2198.1,GhM_A05G4225.1,GhM_D04G0707.1,GhM_D06G2178.1,GhM_A08G0045.1,GhM_D08G0036.1 | 14 | 4 | Gossypium | Cotton | |||
| TA417:GhM_D08G2137.1,GhM_D08G2138.1,GhM_D08G2139.1,GhM_D08G2140.1;TA523:GhM_A08G2182.1,GhM_A08G2183.1,GhM_A08G2184.1,GhM_A08G2185.1;TA1429:GhM_A12G2692.1,GhM_A12G2693.1;TA2744:GhM_D12G2580.1,GhM_D12G2581.1 | AT4G17500||AT5G47230 | ERF5, ATERF-5, ATERF5; ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription activator/ transcription factor||ATERF-1; ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009873|ethylene mediated signaling pathway;GO:0010200|response to chitin;GO:0005643|nuclear pore;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009409|response to cold | GhM_D09G2278.1,GhM_A09G2390.1 | 14 | 4 | Gossypium | Cotton | |||
| TA508:GhM_A07G1592.1,GhM_A07G1596.1,GhM_A07G1597.1,GhM_A07G1598.1;TA2240:GhM_D07G1560.1,GhM_D07G1562.1;TA3608:GhM_Scaf021G139.1,GhM_Scaf021G141.1;TA1253:GhM_A11G1210.1,GhM_A11G1213.1 | AT4G15230||AT2G37280||AT3G53480||AT4G15215 | PDR9, ATPDR9, ABCG37; PDR9 (PLEIOTROPIC DRUG RESISTANCE 9); ATPase, coupled to transmembrane movement of substances||ATPDR2, PDR2; PDR2 (PLEIOTROPIC DRUG RESISTANCE 2); ATPase, coupled to transmembrane movement of substances||PDR13, ATPDR13; PDR13; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||PDR5, ATPDR5; PDR5 (PLEIOTROPIC DRUG RESISTANCE 5); ATPase, coupled to transmembrane movement of substances | GO:0006810|transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006855|drug transmembrane transport;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_D11G2605.1,GhM_Scaf021G140.1,GhM_D11G1216.1,GhM_A11G1211.1 | 14 | 4 | Gossypium | Cotton | |||
| TA622:GhM_A13G0408.1,GhM_A13G0409.1,GhM_A13G0411.1;TA929:GhM_D13G0391.1,GhM_D13G0392.1,GhM_D13G0394.1;TA3098:GhM_A04G1583.1,GhM_A04G1584.1;TA1849:GhM_D04G2059.1,GhM_D04G2060.1 | AT3G18990 | VRN1, REM39; VRN1 (REDUCED VERNALIZATION RESPONSE 1); transcription repressor | GO:0016564|transcription repressor activity;GO:0010048|vernalization response;GO:0005654|nucleoplasm | GhM_A01G0080.1,GhM_A03G2514.1,GhM_D01G0062.1,GhM_D02G2537.1 | 14 | 4 | Gossypium | Cotton | |||
| TA760:GhM_D06G0425.1,GhM_D06G0429.1,GhM_D06G0431.1;TA1052:GhM_A06G0417.1,GhM_A06G0421.1,GhM_A06G0424.1;TA1053:GhM_A06G0448.1,GhM_A06G0450.1,GhM_A06G0452.1;TA2019:GhM_D06G0441.1,GhM_D06G0444.1 | AT2G44030||AT3G46050 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A06G0519.1,GhM_D08G0244.1,GhM_D06G0415.1 | 14 | 4 | Gossypium | Cotton | |||
| - | AT1G60870||AT2G18390 | TTN5, HAL, ARL2, ATARLC1; TTN5 (TITAN 5); GTP binding / GTPase||MEE9; MEE9 (maternal effect embryo arrest 9) | GO:0009630|gravitropism;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0009793|embryonic development ending in seed dormancy;GO:0009558|cellularization of the embryo sac;GO:0005622|intracellular;GO:0000226|microtubule cytoskeleton organization;GO:0009960|endosperm development;GO:0005886|plasma membrane;GO:0007021|tubulin complex assembly | GhM_A01G0027.1,GhM_D01G0011.1,GhM_A02G1646.1,GhM_A01G1497.1,GhM_A08G1813.1,GhM_A03G2727.1,GhM_D02G2743.1,GhM_A08G1603.1,GhM_A02G0193.1,GhM_Scaf147G298.1,GhM_A08G1814.1,GhM_A02G2126.1,GhM_D11G2118.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT2G32990||AT1G64390 | AtGH9B8; AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||AtGH9C2; AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0030246|carbohydrate binding | GhM_A01G0895.1,GhM_D01G0855.1,GhM_A07G1022.1,GhM_D07G1010.1,GhM_A11G1799.1,GhM_D11G1786.1,GhM_D08G1451.1,GhM_A08G1404.1,GhM_A02G1253.1,GhM_D03G0989.1,GhM_A12G2918.1,GhM_D12G2807.1,GhM_D08G1450.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT3G20300||AT5G55200 | unknown protein||co-chaperone grpE protein, putative | ;GO:0005507|copper ion binding;GO:0005739|mitochondrion;GO:0006457|protein folding;GO:0005524|ATP binding | GhM_A01G0901.1,GhM_D01G0859.1,GhM_A04G0117.1,GhM_D05G4290.1,GhM_A04G0116.1,GhM_A01G0905.1,GhM_A11G3482.1,GhM_D11G3396.1,GhM_D01G0863.1,GhM_A09G0831.1,GhM_D04G0097.1,GhM_D13G1741.1,GhM_A13G1853.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G47910||AT5G51060 | RHD2, ATRBOHC, RBOHC; RHD2 (ROOT HAIR DEFECTIVE 2); NAD(P)H oxidase||RBOHD, ATRBOHD; RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase | GO:0010053|root epidermal cell differentiation;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0016174|NAD(P)H oxidase activity;GO:0005887|integral to plasma membrane;GO:0009060|aerobic respiration;GO:0033198|response to ATP;GO:0009408|response to heat;GO:0006952|defense response;GO:0005886|plasma membrane;GO:0050832|defense response to fungus;GO:0043069|negative regulation of programmed cell death | GhM_A01G1287.1,GhM_D01G1257.1,GhM_A05G2171.1,GhM_D05G2194.1,GhM_A05G2902.1,GhM_D05G2914.1,GhM_A07G0571.1,GhM_D07G0560.1,GhM_A12G2477.1,GhM_D12G2362.1,GhM_D03G1358.1,GhM_A03G0744.1,GhM_D07G2403.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT1G67190 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1629.1,GhM_A07G2569.1,GhM_A02G1593.1,GhM_A11G2152.1,GhM_A03G0726.1,GhM_A06G0917.1,GhM_A09G2203.1,GhM_A03G2290.1,GhM_A11G0162.1,GhM_A08G1036.1,GhM_A11G2936.1,GhM_A01G1829.1,GhM_A07G1215.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT1G70940||AT5G57090||AT1G73590 | PIN3, ATPIN3; PIN3 (PIN-FORMED 3); auxin:hydrogen symporter/ transporter||EIR1, WAV6, ATPIN2, PIN2, AGR, AGR1; EIR1 (ETHYLENE INSENSITIVE ROOT 1); auxin efflux transmembrane transporter/ auxin:hydrogen symporter/ transporter||PIN1, ATPIN1; PIN1 (PIN-FORMED 1); transporter | GO:0048364|root development;GO:0048367|shoot development;GO:0016328|lateral plasma membrane;GO:0010051|xylem and phloem pattern formation;GO:0009733|response to auxin stimulus;GO:0048766|root hair initiation;GO:0048767|root hair elongation;GO:0012506|vesicle membrane;GO:0010329|auxin efflux transmembrane transporter activity;GO:0009958|positive gravitropism;GO:0009723|response to ethylene stimulus;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0009925|basal plasma membrane;GO:0009640|photomorphogenesis;GO:0009926|auxin polar transport;GO:0016020|membrane;GO:0007389|pattern specification process;GO:0010338|leaf formation;GO:0010358|leaf shaping;GO:0045177|apical part of cell;GO:0010583|response to cyclopentenone;GO:0009672|auxin:hydrogen symporter activity;GO:0005737|cytoplasm;GO:0009606|tropism;GO:0009630|gravitropism;GO:0000323|lytic vacuole;GO:0010082|regulation of root meristem growth;GO:0009986|cell surface | GhM_A01G1875.1,GhM_D01G1852.1,GhM_D02G1712.1,GhM_A05G0015.1,GhM_D05G0018.1,GhM_A09G2138.1,GhM_D09G2051.1,GhM_A11G0037.1,GhM_D11G0040.1,GhM_A12G3294.1,GhM_D12G3181.1,GhM_A11G3864.1,GhM_D11G3781.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT2G42490||AT5G01500 | mitochondrial substrate carrier family protein||copper amine oxidase, putative | GO:0048038|quinone binding;GO:0009507|chloroplast;GO:0009941|chloroplast envelope;GO:0008131|amine oxidase activity;GO:0006810|transport;GO:0005347|ATP transmembrane transporter activity;GO:0009526|plastid envelope;GO:0009536|plastid;GO:0005488|binding;GO:0005739|mitochondrion;GO:0042651|thylakoid membrane;GO:0005215|transporter activity;GO:0005743|mitochondrial inner membrane | GhM_A01G1984.1,GhM_D01G1948.1,GhM_A01G1985.1,GhM_D12G1820.1,GhM_A03G0765.1,GhM_D03G1336.1,GhM_A12G1892.1,GhM_D07G0656.1,GhM_A08G0059.1,GhM_D01G1101.1,GhM_A12G2156.1,GhM_D02G1875.1,GhM_D06G0532.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G09220||AT1G77380 | AAP2; AAP2 (AMINO ACID PERMEASE 2); amino acid transmembrane transporter||AAP3, ATAAP3; AAP3; amino acid transmembrane transporter | GO:0015802|basic amino acid transport;GO:0005887|integral to plasma membrane;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0015804|neutral amino acid transport;GO:0015800|acidic amino acid transport;GO:0016020|membrane | GhM_A01G2086.1,GhM_D01G2053.1,GhM_A01G2373.1,GhM_D01G2318.1,GhM_A02G1385.1,GhM_A05G2658.1,GhM_D05G2669.1,GhM_A05G4548.1,GhM_D04G0399.1,GhM_A09G0076.1,GhM_D09G0074.1,GhM_D01G2335.1,GhM_A01G2393.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G58420||AT2G17360 | 40S ribosomal protein S4 (RPS4A)||40S ribosomal protein S4 (RPS4D) | GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G2834.1,GhM_D09G1963.1,GhM_A02G1023.1,GhM_A10G1784.1,GhM_A04G1231.1,GhM_A09G2058.1,GhM_D04G1715.1,GhM_A09G2590.1,GhM_D09G2468.1,GhM_D01G2759.1,GhM_D10G1356.1,GhM_D02G1251.1,GhM_Scaf001G039.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT4G13520 | SMAP1; SMAP1 (SMALL ACIDIC PROTEIN 1) | GO:0009733|response to auxin stimulus;GO:0040029|regulation of gene expression, epigenetic;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0501.1,GhM_D04G0760.1,GhM_D01G1783.1,GhM_D08G0435.1,GhM_D02G1458.1,GhM_D10G1557.1,GhM_D04G0942.1,GhM_D05G3618.1,GhM_D09G0854.1,GhM_D08G1274.1,GhM_D07G2041.1,GhM_D12G0825.1,GhM_D03G1201.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G37475||AT1G66070||AT4G32270 | unknown protein||translation initiation factor-related | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A02G0577.1,GhM_D02G0564.1,GhM_A09G1081.1,GhM_D11G0999.1,GhM_D06G1464.1,GhM_D09G2747.1,GhM_A09G2874.1,GhM_A10G2106.1,GhM_D10G2044.1,GhM_D13G1463.1,GhM_D06G1234.1,GhM_A06G1207.1,GhM_D13G1736.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G41950 | binding | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A02G1194.1,GhM_D03G1032.1,GhM_A06G1263.1,GhM_D05G1078.1,GhM_A08G1454.1,GhM_D08G1401.1,GhM_A09G2292.1,GhM_D09G2194.1,GhM_D04G1058.1,GhM_D01G1063.1,GhM_D13G2755.1,GhM_D07G1096.1,GhM_D08G1288.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT2G18170||AT1G59580 | ATMPK2, MPK2; ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2); MAP kinase/ kinase/ protein kinase||ATMPK7, MPK7; ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7); MAP kinase/ kinase | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0042542|response to hydrogen peroxide;GO:0004707|MAP kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0007623|circadian rhythm | GhM_A02G2146.1,GhM_D03G0127.1,GhM_A03G1052.1,GhM_D02G1069.1,GhM_A05G2137.1,GhM_D05G2159.1,GhM_A10G1106.1,GhM_D10G0990.1,GhM_A11G0532.1,GhM_D11G0518.1,GhM_A12G0709.1,GhM_D12G0703.1,GhM_A12G0710.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT4G22810||AT3G60870||AT2G45430 | DNA-binding protein-related | GO:0008150|biological_process;GO:0009640|photomorphogenesis;GO:0003680|AT DNA binding;GO:0003674|molecular_function;GO:0009647|skotomorphogenesis;GO:0005634|nucleus;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0005575|cellular_component | GhM_A03G0199.1,GhM_A04G0806.1,GhM_D09G2253.1,GhM_A08G1807.1,GhM_A07G1788.1,GhM_D07G1751.1,GhM_A11G0943.1,GhM_A09G2366.1,GhM_A12G2776.1,GhM_D12G2663.1,GhM_D08G1760.1,GhM_D11G0957.1,GhM_D03G1900.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G15490||AT3G29360 | UDP-glucose 6-dehydrogenase, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005634|nucleus;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0050662|coenzyme binding;GO:0005829|cytosol;GO:0005618|cell wall;GO:0003979|UDP-glucose 6-dehydrogenase activity;GO:0051287|NAD or NADH binding;GO:0016491|oxidoreductase activity | GhM_A03G1395.1,GhM_D02G1521.1,GhM_A07G0828.1,GhM_D07G0826.1,GhM_A11G0836.1,GhM_D11G0854.1,GhM_A12G0938.1,GhM_D12G0849.1,GhM_A12G2093.1,GhM_D12G1995.1,GhM_A13G0998.1,GhM_D13G0919.1,GhM_D12G2752.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT1G29250||AT2G34160||AT3G04620 | nucleic acid binding | GO:0008150|biological_process;GO:0005634|nucleus;GO:0003676|nucleic acid binding;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A05G0106.1,GhM_D05G0109.1,GhM_A05G0184.1,GhM_D05G0193.1,GhM_A06G0669.1,GhM_D06G0674.1,GhM_A08G3048.1,GhM_D08G2978.1,GhM_A11G3141.1,GhM_D11G3069.1,GhM_A13G2617.1,GhM_D13G2516.1,GhM_D03G0687.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G11170||AT1G80170 | ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding||polygalacturonase, putative / pectinase, putative | GO:0009505|plant-type cell wall;GO:0004650|polygalacturonase activity;GO:0046686|response to cadmium ion;GO:0005975|carbohydrate metabolic process;GO:0005730|nucleolus;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A05G0595.1,GhM_A13G2433.1,GhM_A06G1191.1,GhM_D06G1218.1,GhM_A08G0887.1,GhM_A08G3219.1,GhM_D08G3153.1,GhM_A10G0830.1,GhM_D10G0811.1,GhM_D05G0619.1,GhM_D13G2330.1,GhM_D09G0462.1,GhM_D10G0810.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT5G17920 | ATCIMS, ATMETS, ATMS1; ATMS1; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase/ copper ion binding / methionine synthase | GO:0005507|copper ion binding;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0010043|response to zinc ion;GO:0046686|response to cadmium ion;GO:0009086|methionine biosynthetic process;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0003871|5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008705|methionine synthase activity | GhM_A07G1389.1,GhM_D07G1369.1,GhM_A08G2804.1,GhM_D08G2753.1,GhM_A11G2870.1,GhM_D13G2066.1,GhM_A11G3795.1,GhM_D11G3713.1,GhM_A13G1337.1,GhM_D13G1242.1,GhM_A13G2182.1,GhM_D11G2822.1,GhM_D11G2821.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT3G63460 | WD-40 repeat family protein | GO:0016020|membrane;GO:0003674|molecular_function | GhM_A08G0708.1,GhM_D08G0676.1,GhM_A08G1898.1,GhM_D08G1853.1,GhM_A11G0853.1,GhM_A12G1334.1,GhM_D12G1267.1,GhM_A11G0854.1,GhM_D11G0871.1,GhM_A11G0855.1,GhM_A12G1333.1,GhM_A11G0856.1,GhM_D11G0870.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT2G44740 | CYCP4;1; CYCP4;1 (cyclin p4;1); cyclin-dependent protein kinase | GO:0004693|cyclin-dependent protein kinase activity;GO:0051726|regulation of cell cycle | GhM_A08G0729.1,GhM_D08G0693.1,GhM_A08G1882.1,GhM_D08G1833.1,GhM_A11G0871.1,GhM_A09G3022.1,GhM_D09G2883.1,GhM_A12G1307.1,GhM_D12G1245.1,GhM_D11G0887.1,GhM_D13G0005.1,GhM_A12G2486.1,GhM_D12G2370.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT3G11964||AT3G14600 | RNA binding||60S ribosomal protein L18A (RPL18aC) | GO:0003723|RNA binding;GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0006397|mRNA processing;GO:0006499|N-terminal protein myristoylation;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0006396|RNA processing;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A09G1648.1,GhM_D09G1548.1,GhM_D05G3071.1,GhM_D05G3988.1,GhM_D05G4148.1,GhM_D08G2673.1,GhM_D01G1570.1,GhM_D12G1572.1,GhM_D04G2208.1,GhM_D08G1037.1,GhM_D03G0398.1,GhM_D08G2672.1,GhM_D10G0557.1 | 13 | 0 | Gossypium | Cotton | |||
| - | AT3G04950||AT2G22120 | unknown protein||protein binding / zinc ion binding | ;GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A11G3225.1,GhM_D11G3146.1,GhM_A13G1441.1,GhM_D13G1338.1,GhM_D10G2634.1,GhM_D03G0982.1,GhM_D03G1155.1,GhM_D06G1850.1,GhM_D01G1145.1,GhM_D01G1047.1,GhM_D08G0391.1,GhM_D06G1186.1,GhM_D12G0850.1 | 13 | 0 | Gossypium | Cotton | |||
| TA1509:GhM_A13G1974.1,GhM_A13G1976.1 | AT3G18240 | unknown protein | GO:0008150|biological_process;GO:0005634|nucleus;GO:0005829|cytosol;GO:0003674|molecular_function | GhM_A06G1788.1,GhM_A13G1963.1,GhM_D13G1861.1,GhM_D13G1873.1,GhM_D07G2182.1,GhM_D11G2650.1,GhM_D10G2370.1,GhM_D06G1269.1,GhM_D01G1410.1,GhM_D07G2003.1,GhM_D03G1589.1 | 13 | 1 | Gossypium | Cotton | |||
| TA1579:GhM_D01G0763.1,GhM_D01G0764.1 | AT4G05320||AT1G31340||AT4G02890 | RUB1, NEDD8, ATRUB1; RUB1 (RELATED TO UBIQUITIN 1); protein binding||UBQ10; UBQ10 (POLYUBIQUITIN 10); protein binding||UBQ14; UBQ14; protein binding | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0045116|protein neddylation;GO:0009733|response to auxin stimulus;GO:0009751|response to salicylic acid stimulus;GO:0005886|plasma membrane;GO:0006464|protein modification process;GO:0007568|aging;GO:0005773|vacuole | GhM_A01G1482.1,GhM_A04G0205.1,GhM_A05G4541.1,GhM_A06G1926.1,GhM_A09G1884.1,GhM_A10G0170.1,GhM_D01G1496.1,GhM_D06G1912.1,GhM_D10G0156.1,GhM_D09G1780.1,GhM_D04G0404.1 | 13 | 1 | Gossypium | Cotton | |||
| TA2242:GhM_D07G1692.1,GhM_D07G1694.1 | AT4G01370||AT1G07880 | ATMPK4, MPK4; ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase||ATMPK13; ATMPK13; MAP kinase/ kinase | GO:0006950|response to stress;GO:0009620|response to fungus;GO:0009607|response to biotic stimulus;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0004707|MAP kinase activity;GO:0009861|jasmonic acid and ethylene-dependent systemic resistance;GO:0042539|hypotonic salinity response;GO:0005737|cytoplasm;GO:0009868|jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway;GO:0009651|response to salt stress;GO:0007165|signal transduction;GO:0016310|phosphorylation;GO:0006972|hyperosmotic response;GO:0016301|kinase activity;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0009409|response to cold | GhM_A03G0328.1,GhM_A05G1100.1,GhM_A07G1723.1,GhM_A08G1794.1,GhM_A12G1427.1,GhM_A12G2869.1,GhM_D03G1796.1,GhM_D05G1115.1,GhM_D08G1746.1,GhM_D12G1358.1,GhM_D12G2760.1 | 13 | 1 | Gossypium | Cotton | |||
| TA29:GhM_D10G2993.1,GhM_D10G2995.1,GhM_D10G2999.1,GhM_D10G3000.1,GhM_D10G3001.1,GhM_D10G3002.1,GhM_D10G3003.1,GhM_D10G3004.1,GhM_D10G3005.1,GhM_D10G3006.1,GhM_D10G3007.1,GhM_D10G3008.1 | AT1G16820 | vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related | GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;GO:0005886|plasma membrane;GO:0015986|ATP synthesis coupled proton transport;GO:0005773|vacuole | GhM_Scaf045G176.1 | 13 | 1 | Gossypium | Cotton | |||
| TA3438:GhM_A08G0618.1,GhM_A08G0622.1 | AT5G59240 | 40S ribosomal protein S8 (RPS8B) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A01G0923.1,GhM_A07G1984.1,GhM_A08G0333.1,GhM_D08G0588.1,GhM_D07G1934.1,GhM_D08G0316.1,GhM_D01G0881.1,GhM_D05G4315.1,GhM_A04G0097.1,GhM_A13G1838.1,GhM_D13G1723.1 | 13 | 1 | Gossypium | Cotton | |||
| TA1046:GhM_A05G4230.1,GhM_A05G4231.1,GhM_A05G4232.1;TA1813:GhM_D04G0702.1,GhM_D04G0703.1 | AT3G55090||AT2G39350||AT5G13580||AT3G53510 | ATPase, coupled to transmembrane movement of substances||ABC transporter family protein | GO:0006810|transport;GO:0009624|response to nematode;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A05G4072.1,GhM_A11G4085.1,GhM_A13G0250.1,GhM_D04G0962.1,GhM_D11G3981.1,GhM_D01G2628.1,GhM_A01G2700.1,GhM_D13G0237.1 | 13 | 2 | Gossypium | Cotton | |||
| TA115:GhM_A01G0136.1,GhM_A01G0137.1,GhM_A01G0138.1,GhM_A01G0139.1,GhM_A01G0140.1,GhM_A01G0141.1,GhM_A01G0142.1;TA348:GhM_D01G0115.1,GhM_D01G0116.1,GhM_D01G0118.1,GhM_D01G0119.1 | AT3G18830||AT2G16130||AT4G36670 | mannitol transporter, putative||ATPLT5; ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ mann | GO:0015575|mannitol transmembrane transporter activity;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005354|galactose transmembrane transporter activity;GO:0055085|transmembrane transport;GO:0015576|sorbitol transmembrane transporter activity;GO:0015168|glycerol transmembrane transporter activity;GO:0005365|myo-inositol transmembrane transporter activity;GO:0005355|glucose transmembrane transporter activity;GO:0015148|D-xylose transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane;GO:0015591|D-ribose transmembrane transporter activity;GO:0015145|monosaccharide transmembrane transporter activity | GhM_A03G2380.1,GhM_D02G2398.1 | 13 | 2 | Gossypium | Cotton | |||
| TA1160:GhM_A10G1143.1,GhM_A10G1144.1;TA2999:GhM_A03G1146.1,GhM_A03G1152.1 | ATCG00860 | YCF2.1; Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally. | GO:0017111|nucleoside-triphosphatase activity;GO:0000166|nucleotide binding;GO:0016020|membrane;GO:0005524|ATP binding | GhM_Scaf005G075.1,GhM_A11G0281.1,GhM_Scaf029G155.1,GhM_A13G1128.1,GhM_A13G1512.1,GhM_D03G0587.1,GhM_A03G1330.1,GhM_A12G1555.1,GhM_D01G2297.1 | 13 | 2 | Gossypium | Cotton | |||
| TA118:GhM_D08G2703.1,GhM_D08G2704.1,GhM_D08G2708.1,GhM_D08G2709.1,GhM_D08G2710.1,GhM_D08G2711.1,GhM_D08G2712.1;TA189:GhM_A08G2763.1,GhM_A08G2764.1,GhM_A08G2765.1,GhM_A08G2767.1,GhM_A08G2769.1,GhM_A08G2770.1 | AT5G16360||AT3G02700 | NC domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 13 | 2 | Gossypium | Cotton | |||
| TA1225:GhM_A11G0007.1,GhM_A11G0010.1;TA2536:GhM_D11G0007.1,GhM_D11G0012.1 | AT5G50150||AT1G10750||AT1G23340 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component | GhM_A01G1989.1,GhM_A03G1858.1,GhM_A10G1344.1,GhM_A12G3332.1,GhM_D01G1944.1,GhM_D02G1918.1,GhM_D05G3615.1,GhM_D10G1770.1,GhM_D12G3218.1 | 13 | 2 | Gossypium | Cotton | |||
| TA165:GhM_D13G0115.1,GhM_D13G0116.1,GhM_D13G0117.1,GhM_D13G0119.1,GhM_D13G0120.1,GhM_D13G0121.1;TA215:GhM_A13G0108.1,GhM_A13G0109.1,GhM_A13G0111.1,GhM_A13G0112.1,GhM_A13G0113.1 | AT4G02510 | TOC159, TOC86, PPI2, TOC160, ATTOC159; TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159); transmembrane receptor | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A05G3407.1,GhM_D01G0682.1 | 13 | 2 | Gossypium | Cotton | |||
| TA184:GhM_A06G0388.1,GhM_A06G0389.1,GhM_A06G0390.1,GhM_A06G0391.1,GhM_A06G0392.1,GhM_A06G0393.1;TA241:GhM_D06G0396.1,GhM_D06G0397.1,GhM_D06G0398.1,GhM_D06G0399.1,GhM_D06G0400.1 | AT4G08980 | F-box family protein (FBW2) | GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component | GhM_A05G2520.1,GhM_D05G2533.1 | 13 | 2 | Gossypium | Cotton | |||
| TA1909:GhM_D05G1518.1,GhM_D05G1523.1;TA3152:GhM_A05G1504.1,GhM_A05G1508.1 | AT3G13750||AT1G72990 | BGAL17; BGAL17 (beta-galactosidase 17); beta-galactosidase/ catalytic/ cation binding||BGAL1; BGAL1 (Beta galactosidase 1); beta-galactosidase/ catalytic/ cation binding / heme binding / peroxidase/ sugar binding | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0009505|plant-type cell wall;GO:0005975|carbohydrate metabolic process;GO:0004565|beta-galactosidase activity;GO:0005618|cell wall | GhM_A02G1513.1,GhM_D03G0629.1,GhM_D10G0629.1,GhM_A10G0661.1,GhM_D06G0865.1,GhM_A06G0858.1,GhM_A07G0133.1,GhM_D07G0132.1,GhM_D12G1098.1 | 13 | 2 | Gossypium | Cotton | |||
| TA287:GhM_A02G0773.1,GhM_A02G0775.1,GhM_A02G0776.1,GhM_A02G0777.1,GhM_A02G0778.1;TA1668:GhM_D02G0770.1,GhM_D02G0771.1 | AT1G77120 | ADH1, ADH, ATADH, ATADH1; ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase | GO:0005886|plasma membrane;GO:0009651|response to salt stress;GO:0046686|response to cadmium ion | GhM_A01G2368.1,GhM_A04G0693.1,GhM_A11G0670.1,GhM_D01G2314.1,GhM_D11G0679.1,GhM_D04G1099.1 | 13 | 2 | Gossypium | Cotton | |||
| TA300:GhM_A07G1974.1,GhM_A07G1977.1,GhM_A07G1980.1,GhM_A07G1981.1,GhM_A07G1982.1;TA408:GhM_D07G1921.1,GhM_D07G1922.1,GhM_D07G1924.1,GhM_D07G1925.1 | - | - | - | GhM_A02G1461.1,GhM_A02G1469.1,GhM_A07G2029.1,GhM_D07G1971.1 | 13 | 2 | Gossypium | Cotton | |||
| TA313:GhM_A10G0531.1,GhM_A10G0532.1,GhM_A10G0533.1,GhM_A10G0534.1;TA435:GhM_D10G0505.1,GhM_D10G0506.1,GhM_D10G0507.1,GhM_D10G0509.1 | AT1G56140||AT1G56120||AT1G56130||AT1G56145 | leucine-rich repeat family protein / protein kinase family protein||kinase | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A09G1042.1,GhM_A07G1424.1,GhM_D07G1405.1,GhM_D09G0977.1,GhM_D10G0508.1 | 13 | 2 | Gossypium | Cotton | |||
| TA334:GhM_A11G3486.1,GhM_A11G3487.1,GhM_A11G3488.1,GhM_A11G3489.1;TA451:GhM_D11G3401.1,GhM_D11G3403.1,GhM_D11G3404.1,GhM_D11G3406.1 | AT2G32460||AT5G55020||AT3G11440 | MYB101, ATMYB101, ATM1; MYB101; DNA binding / transcription factor||ATMYB65, MYB65; MYB65 (MYB DOMAIN PROTEIN 65); DNA binding / transcription factor||ATMYB120, MYB120; MYB120 (MYB DOMAIN PROTEIN 120); DNA binding / transcription factor | GO:0009860|pollen tube growth;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0048235|pollen sperm cell differentiation;GO:0009740|gibberellic acid mediated signaling pathway;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | GhM_D13G1750.1,GhM_A13G1860.1,GhM_A01G0869.1,GhM_D01G0833.1,GhM_D09G1306.1 | 13 | 2 | Gossypium | Cotton | |||
| TA366:GhM_D02G1879.1,GhM_D02G1880.1,GhM_D02G1881.1,GhM_D02G1885.1;TA479:GhM_A03G1801.1,GhM_A03G1802.1,GhM_A03G1803.1,GhM_A03G1804.1 | AT5G14450||AT3G26430||AT1G67830 | ATFXG1; ATFXG1 (alpha-fucosidase 1); alpha-L-fucosidase/ carboxylesterase||GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0004560|alpha-L-fucosidase activity;GO:0004091|carboxylesterase activity | GhM_D05G4209.1,GhM_A01G1968.1,GhM_D01G1959.1,GhM_D03G0649.1,GhM_D03G0650.1 | 13 | 2 | Gossypium | Cotton | |||
| TA49:GhM_A11G2464.1,GhM_A11G2465.1,GhM_A11G2466.1,GhM_A11G2467.1,GhM_A11G2468.1,GhM_A11G2469.1,GhM_A11G2470.1,GhM_A11G2471.1,GhM_A11G2472.1;TA887:GhM_D11G2422.1,GhM_D11G2423.1,GhM_D11G2424.1 | AT5G10530 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A10G1005.1 | 13 | 2 | Gossypium | Cotton | |||
| TA644:GhM_D01G0052.1,GhM_D01G0053.1,GhM_D01G0054.1;TA777:GhM_A01G0070.1,GhM_A01G0071.1,GhM_A01G0072.1 | AT2G16280||AT4G34510||AT1G19440||AT2G26640 | KCS4; KCS4 (3-KETOACYL-COA SYNTHASE 4); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups||KCS9; KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups||KCS11; KCS11 (3-KETOACYL-COA SYNTHASE 11); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups||KCS17; KCS17 (3-KETOACYL-COA SYNTHASE 17); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0003824|catalytic activity;GO:0000038|very-long-chain fatty acid metabolic process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0042335|cuticle development;GO:0009416|response to light stimulus;GO:0008415|acyltransferase activity;GO:0030497|fatty acid elongation;GO:0016020|membrane;GO:0009409|response to cold | GhM_A03G2545.1,GhM_D02G2572.1,GhM_D02G1054.1,GhM_D05G2183.1,GhM_A03G1037.1,GhM_A05G2160.1,GhM_A08G3086.1 | 13 | 2 | Gossypium | Cotton | |||
| TA701:GhM_D04G0624.1,GhM_D04G0625.1,GhM_D04G0626.1;TA3228:GhM_A05G4307.1,GhM_A05G4311.1 | AT3G28050||AT5G40240||AT5G40230 | nodulin-related||nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_D11G0799.1,GhM_D04G2398.1,GhM_A02G1965.1,GhM_A05G4309.1,GhM_A05G4310.1,GhM_A10G1623.1,GhM_D03G0299.1,GhM_D10G1492.1 | 13 | 2 | Gossypium | Cotton | |||
| TA839:GhM_D09G1120.1,GhM_D09G1122.1,GhM_D09G1123.1;TA3139:GhM_A05G0954.1,GhM_A05G0955.1 | AT3G47340||AT5G10240 | ASN1, DIN6, AT-ASN1; ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1); asparagine synthase (glutamine-hydrolyzing)||ASN3; ASN3 (ASPARAGINE SYNTHETASE 3); asparagine synthase (glutamine-hydrolyzing) | GO:0008152|metabolic process;GO:0009750|response to fructose stimulus;GO:0009744|response to sucrose stimulus;GO:0043617|cellular response to sucrose starvation;GO:0004066|asparagine synthase (glutamine-hydrolyzing) activity;GO:0009416|response to light stimulus;GO:0006529|asparagine biosynthetic process;GO:0009063|cellular amino acid catabolic process;GO:0009646|response to absence of light;GO:0009749|response to glucose stimulus | GhM_D05G0967.1,GhM_A09G1187.1,GhM_A13G2877.1,GhM_D13G2778.1,GhM_D07G1240.1,GhM_A07G1260.1,GhM_A12G0946.1,GhM_D12G0844.1 | 13 | 2 | Gossypium | Cotton | |||
| TA848:GhM_D09G2622.1,GhM_D09G2623.1,GhM_D09G2624.1;TA1123:GhM_A09G2751.1,GhM_A09G2752.1,GhM_A09G2753.1 | - | - | - | GhM_A02G1644.1,GhM_A03G1752.1,GhM_A06G1917.1,GhM_A06G2441.1,GhM_A07G0502.1,GhM_A08G1518.1,GhM_A11G3883.1 | 13 | 2 | Gossypium | Cotton | |||
| TA1580:GhM_D01G0767.1,GhM_D01G0770.1;TA2128:GhM_A01G0801.1,GhM_A01G0805.1;TA1990:GhM_D05G4174.1,GhM_D05G4176.1 | AT1G54290||AT5G54940 | eukaryotic translation initiation factor SUI1, putative | GO:0005575|cellular_component;GO:0006413|translational initiation;GO:0006412|translation;GO:0003743|translation initiation factor activity | GhM_A11G3502.1,GhM_D11G3416.1,GhM_A01G0857.1,GhM_A13G1865.1,GhM_D01G0820.1,GhM_D08G1609.1,GhM_D13G1754.1 | 13 | 3 | Gossypium | Cotton | |||
| TA775:GhM_D06G2394.1,GhM_D06G2395.1,GhM_D06G2396.1;TA1903:GhM_D05G1295.1,GhM_D05G1298.1;TA3147:GhM_A05G1278.1,GhM_A05G1281.1 | AT1G78950||AT1G78955||AT2G07050 | beta-amyrin synthase, putative||CAS1; CAS1 (cycloartenol synthase 1); cycloartenol synthase||CAMS1; CAMS1 (Camelliol C synthase 1); beta-amyrin synthase | GO:0019745|pentacyclic triterpenoid biosynthetic process;GO:0009555|pollen development;GO:0042300|beta-amyrin synthase activity;GO:0016871|cycloartenol synthase activity;GO:0010027|thylakoid membrane organization;GO:0005773|vacuole | GhM_A06G2389.1,GhM_A08G0233.1,GhM_D08G0223.1,GhM_D04G0409.1,GhM_D10G1919.1,GhM_D06G1798.1 | 13 | 3 | Gossypium | Cotton | |||
| TA1009:GhM_A04G1720.1,GhM_A04G1721.1,GhM_A04G1722.1;TA1859:GhM_D04G2192.1,GhM_D04G2193.1;TA3572:GhM_A09G2194.1,GhM_A09G2196.1;TA2424:GhM_D09G2106.1,GhM_D09G2108.1 | AT4G20820||AT1G26390||AT5G44380||AT5G44400 | FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0006979|response to oxidative stress;GO:0003824|catalytic activity;GO:0005618|cell wall;GO:0050660|FAD binding;GO:0016491|oxidoreductase activity | GhM_A08G1894.1,GhM_A09G2518.1,GhM_D08G1847.1,GhM_D09G2400.1 | 13 | 4 | Gossypium | Cotton | |||
| TA139:GhM_A13G2898.1,GhM_A13G2899.1,GhM_A13G2900.1,GhM_A13G2901.1,GhM_A13G2902.1,GhM_A13G2903.1;TA1331:GhM_A11G3784.1,GhM_A11G3785.1;TA2662:GhM_D11G3703.1,GhM_D11G3704.1;TA2863:GhM_D13G2801.1,GhM_D13G2802.1 | AT2G29350||AT1G07440||AT5G06060||AT2G31420 | SAG13; SAG13; alcohol dehydrogenase/ oxidoreductase||DNA binding||tropinone reductase, putative / tropine dehydrogenase, putative | GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0046686|response to cadmium ion;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0005575|cellular_component;GO:0007568|aging;GO:0016491|oxidoreductase activity | GhM_D13G2800.1 | 13 | 4 | Gossypium | Cotton | |||
| TA1543:GhM_A13G2924.1,GhM_A13G2926.1;TA2973:GhM_A03G0544.1,GhM_A03G0552.1;TA1773:GhM_D03G1578.1,GhM_D03G1585.1;TA2864:GhM_D13G2824.1,GhM_D13G2826.1 | AT5G59910||AT2G28720 | HTB4; HTB4; DNA binding||histone H2B, putative | GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0000786|nucleosome | GhM_D01G2642.1,GhM_D13G1186.1,GhM_A08G0048.1,GhM_A13G1311.1,GhM_D08G0040.1 | 13 | 4 | Gossypium | Cotton | |||
| TA379:GhM_D04G1572.1,GhM_D04G1573.1,GhM_D04G1576.1,GhM_D04G1577.1;TA488:GhM_A04G1108.1,GhM_A04G1109.1,GhM_A04G1111.1,GhM_A04G1112.1;TA3567:GhM_A09G1912.1,GhM_A09G1913.1;TA2418:GhM_D09G1810.1,GhM_D09G1811.1 | AT2G37770||AT2G37760 | aldo/keto reductase family protein | GO:0046686|response to cadmium ion;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_A11G4108.1 | 13 | 4 | Gossypium | Cotton | |||
| TA486:GhM_A04G0520.1,GhM_A04G0521.1,GhM_A04G0523.1,GhM_A04G0525.1;TA1976:GhM_D05G3857.1,GhM_D05G3860.1;TA1505:GhM_A13G1801.1,GhM_A13G1802.1;TA941:GhM_D13G1694.1,GhM_D13G1696.1,GhM_D13G1697.1 | AT3G26300||AT5G25140||AT3G26310||AT3G26210||AT3G26230||AT5G25120 | CYP71B11; CYP71B11; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B24; CYP71B24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B35; CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B13; CYP71B13; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D13G1681.1,GhM_A13G1818.1 | 13 | 4 | Gossypium | Cotton | |||
| TA404:GhM_A01G2384.1,GhM_A01G2387.1,GhM_A01G2388.1,GhM_A01G2389.1;TA660:GhM_D01G2326.1,GhM_D01G2328.1,GhM_D01G2331.1;TA1617:GhM_D01G2327.1,GhM_D01G2329.1;TA3558:GhM_A09G1622.1,GhM_A09G1624.1;TA2408:GhM_D09G1519.1,GhM_D09G1522.1 | AT5G06740 | lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 13 | 5 | Gossypium | Cotton | |||
| - | AT3G14440||AT1G30100 | NCED5, ATNCED5; NCED5 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5); 9-cis-epoxycarotenoid dioxygenase||NCED3, ATNCED3, STO1, SIS7; NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3); 9-cis-epoxycarotenoid dioxygenase | GO:0009688|abscisic acid biosynthetic process;GO:0006970|response to osmotic stress;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0045549|9-cis-epoxycarotenoid dioxygenase activity;GO:0042538|hyperosmotic salinity response;GO:0009414|response to water deprivation;GO:0009535|chloroplast thylakoid membrane | GhM_A01G0384.1,GhM_D01G0369.1,GhM_A05G1654.1,GhM_D05G1664.1,GhM_A06G1813.1,GhM_D06G1799.1,GhM_A08G3012.1,GhM_D08G2945.1,GhM_A10G0461.1,GhM_D13G1937.1,GhM_A13G2046.1,GhM_D10G0442.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT2G46290 | eukaryotic translation initiation factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative | GO:0000166|nucleotide binding | GhM_A01G0654.1,GhM_D11G2095.1,GhM_A05G1125.1,GhM_D05G1140.1,GhM_A08G2557.1,GhM_D08G2489.1,GhM_A13G1522.1,GhM_D01G1909.1,GhM_D07G1364.1,GhM_D05G3235.1,GhM_D08G1718.1,GhM_D06G0276.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G48150 | PAT1; PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor | GO:0003700|transcription factor activity;GO:0009640|photomorphogenesis;GO:0004871|signal transducer activity;GO:0005737|cytoplasm | GhM_A01G0935.1,GhM_D01G0892.1,GhM_A04G0094.1,GhM_D05G4318.1,GhM_D05G3011.1,GhM_D10G1095.1,GhM_A08G2895.1,GhM_D02G0546.1,GhM_D12G1413.1,GhM_D11G2573.1,GhM_D07G2558.1,GhM_D11G2574.1 | 12 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G0955.1,GhM_A03G1174.1,GhM_A02G1003.1,GhM_D07G2486.1,GhM_A02G1057.1,GhM_A07G1526.1,GhM_A01G1643.1,GhM_D11G1658.1,GhM_A12G1271.1,GhM_A10G2745.1,GhM_D02G1438.1,GhM_D11G2868.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G45130||AT4G36360 | BGAL5; BGAL5 (beta-galactosidase 5); beta-galactosidase/ catalytic/ cation binding||BGAL3; BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding | GO:0012505|endomembrane system;GO:0005990|lactose catabolic process;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0019515|lactose catabolic process via UDP-galactose;GO:0043169|cation binding;GO:0004565|beta-galactosidase activity;GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase;GO:0009341|beta-galactosidase complex | GhM_A01G1264.1,GhM_D01G1230.1,GhM_A05G2122.1,GhM_A02G2155.1,GhM_D03G0118.1,GhM_A06G0071.1,GhM_D06G0068.1,GhM_A11G2094.1,GhM_D11G2073.1,GhM_D02G2599.1,GhM_A03G2573.1,GhM_D05G2143.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G19540 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A01G1344.1,GhM_D01G1314.1,GhM_A04G1553.1,GhM_A03G2431.1,GhM_D02G2453.1,GhM_A12G0222.1,GhM_A06G0236.1,GhM_D06G0239.1,GhM_A13G0490.1,GhM_D13G0479.1,GhM_D04G2032.1,GhM_D12G0229.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G58440||AT4G37760 | XF1, SQE1; XF1; squalene monooxygenase||SQE3; SQE3 (squalene epoxidase 3); squalene monooxygenase | GO:0012505|endomembrane system;GO:0004506|squalene monooxygenase activity;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus;GO:0009414|response to water deprivation;GO:0016021|integral to membrane;GO:0016126|sterol biosynthetic process | GhM_A01G1395.1,GhM_A06G0281.1,GhM_A02G1943.1,GhM_D03G0325.1,GhM_A03G2741.1,GhM_D02G2757.1,GhM_A05G2387.1,GhM_D05G2400.1,GhM_D01G1372.1,GhM_D06G0282.1,GhM_D01G2201.1,GhM_D11G2372.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT4G38200||AT4G35380 | guanine nucleotide exchange family protein | GO:0009507|chloroplast;GO:0005488|binding;GO:0005086|ARF guanyl-nucleotide exchange factor activity;GO:0005085|guanyl-nucleotide exchange factor activity;GO:0005622|intracellular;GO:0032012|regulation of ARF protein signal transduction | GhM_A01G1396.1,GhM_A12G0133.1,GhM_A03G2251.1,GhM_D02G2279.1,GhM_A04G1442.1,GhM_D04G1929.1,GhM_A05G3992.1,GhM_D13G0631.1,GhM_D12G0141.1,GhM_A13G0754.1,GhM_A05G3993.1,GhM_A08G2642.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G73805||AT2G02560 | CAND1, ATCAND1, ETA2, TIP120, HVE; CAND1 (CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED); binding||calmodulin binding | GO:0008150|biological_process;GO:0010051|xylem and phloem pattern formation;GO:0005488|binding;GO:0009733|response to auxin stimulus;GO:0005516|calmodulin binding;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0005575|cellular_component | GhM_A01G1993.1,GhM_A03G0926.1,GhM_A03G0671.1,GhM_A09G0708.1,GhM_D09G0656.1,GhM_A12G3270.1,GhM_D12G3155.1,GhM_D13G0975.1,GhM_A12G2346.1,GhM_D12G2242.1,GhM_D12G2241.1,GhM_A13G1176.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT4G33760||AT1G14020 | unknown protein||tRNA synthetase class II (D, K and N) family protein | GO:0008150|biological_process;GO:0004812|aminoacyl-tRNA ligase activity;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0005737|cytoplasm;GO:0005739|mitochondrion;GO:0004815|aspartate-tRNA ligase activity;GO:0003676|nucleic acid binding;GO:0006418|tRNA aminoacylation for protein translation;GO:0006412|translation;GO:0006422|aspartyl-tRNA aminoacylation;GO:0005575|cellular_component;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A01G2262.1,GhM_D01G2221.1,GhM_A13G0392.1,GhM_A04G0260.1,GhM_A05G0953.1,GhM_A09G0764.1,GhM_A10G2469.1,GhM_A13G0391.1,GhM_A12G2109.1,GhM_A03G1375.1,GhM_D02G1499.1,GhM_D12G2011.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G35910||AT5G65140 | trehalose-6-phosphate phosphatase, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0004805|trehalose-phosphatase activity;GO:0005992|trehalose biosynthetic process | GhM_A01G2326.1,GhM_D01G2277.1,GhM_A05G2557.1,GhM_D05G2569.1,GhM_A02G1878.1,GhM_D03G0384.1,GhM_A11G2355.1,GhM_A06G0419.1,GhM_D06G0428.1,GhM_A06G0449.1,GhM_D11G2548.1,GhM_D12G1189.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G03650||AT2G36390 | SBE2.1, BE3; SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme||SBE2.2; SBE2.2 (starch branching enzyme 2.2); 1,4-alpha-glucan branching enzyme | GO:0009507|chloroplast;GO:0005982|starch metabolic process;GO:0010021|amylopectin biosynthetic process;GO:0003844|1,4-alpha-glucan branching enzyme activity;GO:0009570|chloroplast stroma | GhM_A01G2587.1,GhM_D01G2516.1,GhM_A04G0844.1,GhM_D04G1297.1,GhM_D01G1346.1,GhM_D01G1771.1,GhM_D03G0907.1,GhM_A02G1088.1,GhM_D02G1123.1,GhM_D05G3671.1,GhM_D10G2056.1,GhM_D12G0507.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G09630||AT2G37060 | NF-YB8; NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor||60S ribosomal protein L4/L1 (RPL4A) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0022625|cytosolic large ribosomal subunit;GO:0006355|regulation of transcription, DNA-dependent;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G2688.1,GhM_D11G3978.1,GhM_A04G1011.1,GhM_D04G1459.1,GhM_A11G4082.1,GhM_D01G2619.1,GhM_A13G1052.1,GhM_D13G1167.1,GhM_D11G3977.1,GhM_A10G2628.1,GhM_D10G2544.1,GhM_D05G3374.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G07810||AT1G07670||AT4G00900 | ECA2, ATECA2; ECA2 (ER-TYPE CA2+-ATPASE 2); calcium-transporting ATPase||ECA1, ATECA1, ACA3; ECA1 (ER-TYPE CA2+-ATPASE 1); calcium-transporting ATPase||ATECA4, ECA4; calcium-transporting ATPase | GO:0008152|metabolic process;GO:0005789|endoplasmic reticulum membrane;GO:0010042|response to manganese ion;GO:0046686|response to cadmium ion;GO:0006754|ATP biosynthetic process;GO:0005388|calcium-transporting ATPase activity;GO:0006812|cation transport;GO:0006816|calcium ion transport;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0006828|manganese ion transport;GO:0016021|integral to membrane;GO:0005783|endoplasmic reticulum;GO:0030026|cellular manganese ion homeostasis | GhM_A01G2702.1,GhM_D01G2631.1,GhM_A03G0518.1,GhM_D03G1611.1,GhM_A07G1144.1,GhM_D07G1123.1,GhM_A11G1154.1,GhM_D11G1166.1,GhM_A07G1659.1,GhM_D07G1624.1,GhM_A11G1152.1,GhM_A11G1153.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G25400 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 572 Blast hits to 572 proteins in 181 species: Archae - 11; Bacteria - 286; Metazoa - 71; Fungi - 1; Plants - 31; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0173.1,GhM_D02G0178.1,GhM_A07G1095.1,GhM_A07G0834.1,GhM_D07G0835.1,GhM_D07G1077.1,GhM_A07G2543.1,GhM_A11G1674.1,GhM_A10G1297.1,GhM_D10G1799.1,GhM_D11G1663.1,GhM_D07G2446.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G22400||AT1G55020 | LOX5; LOX5; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen||LOX1; LOX1; lipoxygenase | GO:0048364|root development;GO:0009695|jasmonic acid biosynthetic process;GO:0009507|chloroplast;GO:0009737|response to abscisic acid stimulus;GO:0040007|growth;GO:0016702|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0009611|response to wounding;GO:0006952|defense response;GO:0005506|iron ion binding;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009753|response to jasmonic acid stimulus;GO:0016165|lipoxygenase activity;GO:0030397|membrane disassembly;GO:0046872|metal ion binding;GO:0005575|cellular_component;GO:0009055|electron carrier activity | GhM_A02G0337.1,GhM_D02G0358.1,GhM_A03G2229.1,GhM_A09G2642.1,GhM_A04G0510.1,GhM_D13G1365.1,GhM_A04G0509.1,GhM_A13G1478.1,GhM_A04G0511.1,GhM_D09G2524.1,GhM_D13G1324.1,GhM_D09G2523.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G04480 | 60S ribosomal protein L23 (RPL23A) | GO:0005840|ribosome;GO:0005622|intracellular;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A02G0474.1,GhM_A09G2784.1,GhM_A07G1867.1,GhM_A10G1268.1,GhM_A07G2548.1,GhM_A11G1567.1,GhM_D02G0468.1,GhM_D09G2660.1,GhM_D07G1827.1,GhM_D11G1561.1,GhM_D09G0279.1,GhM_D10G1851.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT2G47810||AT1G09030 | NF-YB5; NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT B5); transcription factor||NF-YB4; NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4); transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0005622|intracellular;GO:0003700|transcription factor activity | GhM_A02G0549.1,GhM_D02G0534.1,GhM_A09G2920.1,GhM_D09G2781.1,GhM_A10G2045.1,GhM_D10G1984.1,GhM_A08G1597.1,GhM_D08G1548.1,GhM_A11G1363.1,GhM_D11G1361.1,GhM_D13G2219.1,GhM_A13G2330.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G79750||AT5G25880||AT5G11670 | ATNADP-ME2; ATNADP-ME2 (NADP-malic enzyme 2); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor||ATNADP-ME3; ATNADP-ME3 (NADP-malic enzyme 3); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor||ATNADP-ME4; ATNADP-ME4 (NADP-malic enzyme 4); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor | GO:0008152|metabolic process;GO:0046686|response to cadmium ion;GO:0055114|oxidation reduction;GO:0005886|plasma membrane;GO:0050897|cobalt ion binding;GO:0009051|pentose-phosphate shunt, oxidative branch;GO:0006499|N-terminal protein myristoylation;GO:0005618|cell wall;GO:0016020|membrane;GO:0006633|fatty acid biosynthetic process;GO:0009793|embryonic development ending in seed dormancy;GO:0048046|apoplast;GO:0008270|zinc ion binding;GO:0016652|oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor;GO:0004470|malic enzyme activity;GO:0009845|seed germination;GO:0009507|chloroplast;GO:0006108|malate metabolic process;GO:0004473|malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity | GhM_A02G1539.1,GhM_D03G0651.1,GhM_A05G0502.1,GhM_D05G0524.1,GhM_A06G1109.1,GhM_D06G1121.1,GhM_A07G0101.1,GhM_D07G0103.1,GhM_A07G0286.1,GhM_D07G0288.1,GhM_A10G0729.1,GhM_D10G0708.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G79820||AT1G79830||AT1G67300 | SGB1; SGB1 (SUPPRESSOR OF G PROTEIN BETA1); carbohydrate transmembrane transporter/ sugar:hydrogen symporter||GC5; GC5 (golgin candidate 5); protein binding||hexose transporter, putative | GO:0008150|biological_process;GO:0005515|protein binding;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005634|nucleus;GO:0055085|transmembrane transport;GO:0005737|cytoplasm;GO:0005794|Golgi apparatus;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane | GhM_A02G1570.1,GhM_D03G0843.1,GhM_A05G1444.1,GhM_D05G1458.1,GhM_A10G0917.1,GhM_D10G0738.1,GhM_D10G0736.1,GhM_A05G0263.1,GhM_D05G0272.1,GhM_A13G2580.1,GhM_D13G2493.1,GhM_A10G0918.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G58215||AT2G22560||AT5G10500 | ||kinase interacting family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT5G10500.1); Has 47807 Blast hits to 30104 proteins in 1314 species: Archae - 612; Bacteria - 5009; Metazoa - 22214; Fungi - 3986; Plants - 1654; Viruses - 215; Other Eukaryotes - 14117 (source: NCBI BLink). | ;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A02G1886.1,GhM_D03G0378.1,GhM_D12G0891.1,GhM_A10G1000.1,GhM_D10G1083.1,GhM_A11G2449.1,GhM_D11G2436.1,GhM_A12G1189.1,GhM_D12G0888.1,GhM_D12G0890.1,GhM_D12G0889.1,GhM_D12G0887.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G51920||AT4G22980 | catalytic/ pyridoxal phosphate binding||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: catalytic/ pyridoxal phosphate binding (TAIR:AT5G51920.1); Has 294 Blast hits to 268 proteins in 91 species: Archae - 4; Bacteria - 15; Metazoa - 79; Fungi - 66; Plants - 107; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0030170|pyridoxal phosphate binding | GhM_A03G0244.1,GhM_D03G1870.1,GhM_A04G1153.1,GhM_D01G1368.1,GhM_A07G2604.1,GhM_D01G0998.1,GhM_A12G2270.1,GhM_D06G1751.1,GhM_A12G2799.1,GhM_D12G2687.1,GhM_D01G0997.1,GhM_D03G1809.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G55280 | RPL23AB; RPL23AB (RIBOSOMAL PROTEIN L23AB); RNA binding / nucleotide binding / structural constituent of ribosome | GO:0003723|RNA binding;GO:0022626|cytosolic ribosome;GO:0006979|response to oxidative stress;GO:0009644|response to high light intensity;GO:0000166|nucleotide binding;GO:0022625|cytosolic large ribosomal subunit;GO:0005622|intracellular;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0016020|membrane;GO:0042254|ribosome biogenesis;GO:0009409|response to cold | GhM_A03G0535.1,GhM_D03G1597.1,GhM_A05G1079.1,GhM_A08G0047.1,GhM_A07G1153.1,GhM_D07G1133.1,GhM_A10G2700.1,GhM_D10G2614.1,GhM_D05G1092.1,GhM_A13G2933.1,GhM_D08G0039.1,GhM_D13G2834.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G74310 | ATHSP101, HSP101, HOT1; ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | GO:0005515|protein binding;GO:0009644|response to high light intensity;GO:0043335|protein unfolding;GO:0042542|response to hydrogen peroxide;GO:0009408|response to heat;GO:0016887|ATPase activity;GO:0005524|ATP binding | GhM_A03G0592.1,GhM_D03G1172.1,GhM_A03G0937.1,GhM_A07G0824.1,GhM_A03G0593.1,GhM_D07G0823.1,GhM_A03G0594.1,GhM_D03G1530.1,GhM_A03G0939.1,GhM_D03G1174.1,GhM_A03G0938.1,GhM_D03G1173.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT2G47610||AT3G62870 | 60S ribosomal protein L7A (RPL7aA)||60S ribosomal protein L7A (RPL7aB) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A03G0733.1,GhM_D03G1372.1,GhM_A07G0603.1,GhM_D07G0594.1,GhM_A09G2978.1,GhM_A09G3006.1,GhM_A09G2996.1,GhM_D09G2867.1,GhM_A11G0464.1,GhM_D11G0445.1,GhM_A12G2429.1,GhM_D12G2322.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G48760 | 60S ribosomal protein L13A (RPL13aD) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0015934|large ribosomal subunit;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A03G1244.1,GhM_D02G1454.1,GhM_A07G1938.1,GhM_D07G1892.1,GhM_A08G0610.1,GhM_D08G0580.1,GhM_A09G2483.1,GhM_D09G2368.1,GhM_A10G1513.1,GhM_D10G1606.1,GhM_A11G1621.1,GhM_D11G1608.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G14420 | RGLG2; RGLG2 (RING domain Ligase2); ubiquitin-protein ligase | GO:0006499|N-terminal protein myristoylation;GO:0009690|cytokinin metabolic process;GO:0004842|ubiquitin-protein ligase activity;GO:0005886|plasma membrane;GO:0009850|auxin metabolic process | GhM_A03G1789.1,GhM_D02G1866.1,GhM_A05G3642.1,GhM_D05G3605.1,GhM_A05G4249.1,GhM_D04G0688.1,GhM_A07G2878.1,GhM_D07G2784.1,GhM_A09G0408.1,GhM_D09G0374.1,GhM_D12G2261.1,GhM_A12G2366.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G19130||AT1G47490 | ATRBP47B; ATRBP47B (RNA-binding protein 47B); RNA binding||ATRBP47C; ATRBP47C (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47C); RNA binding | GO:0003723|RNA binding | GhM_A03G2512.1,GhM_D02G2535.1,GhM_A05G2247.1,GhM_D05G2266.1,GhM_A05G2924.1,GhM_D05G2938.1,GhM_A06G0166.1,GhM_D06G0170.1,GhM_A12G0273.1,GhM_D12G0278.1,GhM_A13G0430.1,GhM_D13G0416.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT4G39210||AT1G27680||AT5G19220 | APL3; APL3; glucose-1-phosphate adenylyltransferase||ADG2, APL1; APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1); glucose-1-phosphate adenylyltransferase||APL2; APL2 (ADPGLC-PPASE LARGE SUBUNIT); glucose-1-phosphate adenylyltransferase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005978|glycogen biosynthetic process;GO:0009058|biosynthetic process;GO:0019252|starch biosynthetic process;GO:0009570|chloroplast stroma;GO:0030244|cellulose biosynthetic process;GO:0008878|glucose-1-phosphate adenylyltransferase activity;GO:0005575|cellular_component | GhM_A03G2553.1,GhM_D02G2580.1,GhM_A05G2148.1,GhM_D05G2171.1,GhM_A06G0087.1,GhM_D06G0088.1,GhM_A07G1617.1,GhM_D07G1582.1,GhM_D09G2507.1,GhM_A09G2626.1,GhM_D13G0357.1,GhM_A13G0374.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G57100 | transporter-related | GO:0016020|membrane | GhM_A04G0338.1,GhM_A04G1745.1,GhM_A11G3170.1,GhM_A05G2978.1,GhM_A05G0017.1,GhM_D05G0020.1,GhM_A07G1949.1,GhM_A06G1281.1,GhM_A13G0666.1,GhM_A09G0614.1,GhM_A11G2697.1,GhM_D11G2676.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G20060||AT3G15650||AT1G52700 | phospholipase/carboxylesterase family protein | GO:0008150|biological_process;GO:0004091|carboxylesterase activity;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_A05G0203.1,GhM_D05G0209.1,GhM_A06G0679.1,GhM_D06G0683.1,GhM_A13G2610.1,GhM_D13G2508.1,GhM_D10G0790.1,GhM_A05G1381.1,GhM_D05G1391.1,GhM_A06G2423.1,GhM_D06G2421.1,GhM_A10G0851.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G43810||AT1G48410 | ZLL, PNH, AGO10; ZLL (ZWILLE); translation initiation factor||AGO1; AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding | GO:0035197|siRNA binding;GO:0010072|primary shoot apical meristem specification;GO:0009733|response to auxin stimulus;GO:0016441|posttranscriptional gene silencing;GO:0035195|gene silencing by miRNA;GO:0048830|adventitious root development;GO:0003743|translation initiation factor activity;GO:0010218|response to far red light;GO:0009850|auxin metabolic process;GO:0016246|RNA interference;GO:0009965|leaf morphogenesis;GO:0004521|endoribonuclease activity;GO:0035198|miRNA binding;GO:0009793|embryonic development ending in seed dormancy;GO:0005737|cytoplasm;GO:0005829|cytosol;GO:0005515|protein binding;GO:0009616|virus induced gene silencing;GO:0005634|nucleus | GhM_A05G0221.1,GhM_D05G0226.1,GhM_A09G2114.1,GhM_D09G2023.1,GhM_A05G4547.1,GhM_A12G3335.1,GhM_A09G2697.1,GhM_D09G2575.1,GhM_A10G1423.1,GhM_D10G1696.1,GhM_D12G3221.1,GhM_D05G4323.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G08845||AT3G06350||AT2G47920 | structural constituent of ribosome||kinase interacting family protein||EMB3004, MEE32; MEE32 (MATERNAL EFFECT EMBRYO ARREST 32); 3-dehydroquinate dehydratase/ NADP or NADPH binding / binding / catalytic/ shikimate 5-dehydrogenase | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0005488|binding;GO:0009793|embryonic development ending in seed dormancy;GO:0009570|chloroplast stroma;GO:0050661|NADP or NADPH binding;GO:0003855|3-dehydroquinate dehydratase activity;GO:0005575|cellular_component;GO:0004764|shikimate 5-dehydrogenase activity | GhM_A05G0314.1,GhM_A07G1122.1,GhM_D13G0852.1,GhM_A08G2655.1,GhM_A13G1360.1,GhM_D13G1258.1,GhM_D13G1257.1,GhM_D02G1150.1,GhM_D04G1034.1,GhM_D08G1535.1,GhM_A08G1586.1,GhM_D10G0123.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G20490||AT1G54560 | XIK, ATXIK, XI-17; XIK; motor/ protein binding||XIE, ATXIE; XIE; motor/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0051301|cell division;GO:0030048|actin filament-based movement;GO:0010090|trichome morphogenesis;GO:0051646|mitochondrion localization;GO:0016049|cell growth;GO:0060151|peroxisome localization;GO:0010091|trichome branching;GO:0051645|Golgi localization;GO:0016459|myosin complex;GO:0048768|root hair cell tip growth;GO:0009791|post-embryonic development;GO:0010154|fruit development;GO:0003774|motor activity | GhM_A05G0349.1,GhM_D05G0368.1,GhM_A07G0160.1,GhM_D07G0159.1,GhM_A08G2774.1,GhM_D08G2718.1,GhM_A10G0632.1,GhM_D10G0603.1,GhM_A11G3150.1,GhM_D11G3076.1,GhM_A13G2542.1,GhM_D13G2455.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G11160||AT1G27450||AT4G12440 | APT4; adenine phosphoribosyltransferase, putative||APT1, ATAPT1; APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1); adenine phosphoribosyltransferase||APT5; APT5 (Adenine phosphoribosyltransferase 5); adenine phosphoribosyltransferase | GO:0009117|nucleotide metabolic process;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0003999|adenine phosphoribosyltransferase activity;GO:0009116|nucleoside metabolic process;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0006168|adenine salvage;GO:0005575|cellular_component;GO:0009061|anaerobic respiration | GhM_A05G0611.1,GhM_D05G0631.1,GhM_A05G1357.1,GhM_D05G1371.1,GhM_A05G2352.1,GhM_D05G2366.1,GhM_A06G0247.1,GhM_D06G0249.1,GhM_A06G1208.1,GhM_D06G1235.1,GhM_A12G2740.1,GhM_D12G2627.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G03060||AT4G02660 | WD-40 repeat family protein / beige-related | GO:0009507|chloroplast;GO:0009825|multidimensional cell growth;GO:0005488|binding;GO:0010090|trichome morphogenesis;GO:0007033|vacuole organization;GO:0007165|signal transduction;GO:0005575|cellular_component | GhM_A05G0867.1,GhM_D08G2385.1,GhM_A05G0868.1,GhM_A08G2437.1,GhM_A08G0587.1,GhM_D08G0559.1,GhM_A11G1474.1,GhM_D11G1463.1,GhM_D02G1858.1,GhM_D03G0861.1,GhM_D07G1343.1,GhM_D13G1385.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT2G19730||AT4G29410 | 60S ribosomal protein L28 (RPL28A)||60S ribosomal protein L28 (RPL28C) | GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0042254|ribosome biogenesis | GhM_A05G1487.1,GhM_D05G1501.1,GhM_A06G0834.1,GhM_D06G0841.1,GhM_A06G2460.1,GhM_D06G2457.1,GhM_A10G0685.1,GhM_D10G0663.1,GhM_D07G1931.1,GhM_D08G1729.1,GhM_D09G1202.1,GhM_D09G1203.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G04610||AT4G28720||AT5G43890 | YUC5, SUPER1; YUCCA5; monooxygenase||flavin-containing monooxygenase family protein / FMO family protein||flavin-containing monooxygenase / FMO (YUCCA3) | GO:0009851|auxin biosynthetic process;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_A05G3872.1,GhM_D05G3674.1,GhM_A07G1901.1,GhM_D07G1856.1,GhM_A07G2617.1,GhM_D07G2518.1,GhM_A08G2490.1,GhM_D08G2436.1,GhM_A10G1458.1,GhM_D10G1665.1,GhM_A11G1581.1,GhM_D11G1576.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT2G28500||AT1G07900 | LBD11; LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)||LBD1; LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1) | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005739|mitochondrion | GhM_A05G4095.1,GhM_D04G0984.1,GhM_A06G2210.1,GhM_D06G2186.1,GhM_A07G1401.1,GhM_D07G1380.1,GhM_A08G0137.1,GhM_D08G0127.1,GhM_A09G1367.1,GhM_D09G1284.1,GhM_D13G0041.1,GhM_A13G0039.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G02800||AT1G05000||AT4G03960 | tyrosine specific protein phosphatase family protein||phosphatase/ phosphoprotein phosphatase/ protein tyrosine phosphatase | GO:0016311|dephosphorylation;GO:0016791|phosphatase activity;GO:0004725|protein tyrosine phosphatase activity;GO:0004721|phosphoprotein phosphatase activity;GO:0005575|cellular_component | GhM_A05G4661.1,GhM_D04G0286.1,GhM_A07G1029.1,GhM_A06G2014.1,GhM_D06G1998.1,GhM_A07G2412.1,GhM_D07G2329.1,GhM_A10G0118.1,GhM_D10G0103.1,GhM_D07G1019.1,GhM_A13G2071.1,GhM_D13G1963.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT4G02480||AT1G02890||AT4G24860 | AAA-type ATPase family protein | GO:0009507|chloroplast;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A07G0632.1,GhM_D07G0626.1,GhM_D12G2290.1,GhM_A08G0942.1,GhM_D08G0901.1,GhM_A11G1349.1,GhM_D11G1348.1,GhM_A12G1711.1,GhM_D12G1659.1,GhM_D12G2291.1,GhM_A12G2396.1,GhM_A12G2397.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT4G00100 | ATRPS13A, RPS13, PFL2; ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent of ribosome | GO:0009965|leaf morphogenesis;GO:0022627|cytosolic small ribosomal subunit;GO:0010090|trichome morphogenesis;GO:0000911|cytokinesis by cell plate formation;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane | GhM_A07G1797.1,GhM_D07G1759.1,GhM_A08G0407.1,GhM_D08G1776.1,GhM_A08G1824.1,GhM_A09G2173.1,GhM_D09G2087.1,GhM_A11G0929.1,GhM_A12G3235.1,GhM_D12G3124.1,GhM_D08G0393.1,GhM_D11G0944.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G24880||AT3G24870 | DNA binding | GO:0003677|DNA binding;GO:0048046|apoplast | GhM_A07G1945.1,GhM_D07G1900.1,GhM_A07G1946.1,GhM_D11G1612.1,GhM_A07G1948.1,GhM_D08G3094.1,GhM_A11G1615.1,GhM_A07G2593.1,GhM_D07G2497.1,GhM_D05G0068.1,GhM_A08G2530.1,GhM_D08G2464.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G58110||AT2G16950 | ATPase activator/ chaperone binding||TRN1, ATTRN1; TRN1 (TRANSPORTIN 1); protein transporter | GO:0008150|biological_process;GO:0001671|ATPase activator activity;GO:0051087|chaperone binding;GO:0005643|nuclear pore;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0000059|protein import into nucleus, docking;GO:0051170|nuclear import;GO:0008565|protein transporter activity | GhM_A08G0241.1,GhM_D08G0233.1,GhM_D05G3678.1,GhM_D03G1137.1,GhM_D09G0717.1,GhM_D06G1948.1,GhM_D07G2161.1,GhM_D09G0716.1,GhM_D04G1535.1,GhM_D10G1982.1,GhM_D12G1821.1,GhM_D03G0612.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT1G01950||AT1G12430 | ARK2; armadillo/beta-catenin repeat family protein / kinesin motor family protein||PAK, ARK3; ARK3 (ARMADILLO REPEAT KINESIN 3); ATP binding / binding / microtubule motor | GO:0048364|root development;GO:0007018|microtubule-based movement;GO:0009507|chloroplast;GO:0005488|binding;GO:0003777|microtubule motor activity;GO:0005875|microtubule associated complex;GO:0005524|ATP binding | GhM_A08G0413.1,GhM_D08G0399.1,GhM_A09G2365.1,GhM_D09G2252.1,GhM_A11G0945.1,GhM_D11G0959.1,GhM_A12G2777.1,GhM_D12G2664.1,GhM_D04G0793.1,GhM_D13G1266.1,GhM_D03G1455.1,GhM_D02G1010.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G05590||AT5G27850 | 60S ribosomal protein L18 (RPL18C)||RPL18; RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0015934|large ribosomal subunit;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A08G0544.1,GhM_D08G0510.1,GhM_A08G0969.1,GhM_D08G0926.1,GhM_A08G2681.1,GhM_D13G2229.1,GhM_A11G1332.1,GhM_D11G1332.1,GhM_A11G3377.1,GhM_D11G3289.1,GhM_A13G2338.1,GhM_D08G2624.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT3G63010||AT5G27320||AT3G05120 | ATGID1B, GID1B; GID1B (GA INSENSITIVE DWARF1B); hydrolase||ATGID1C, GID1C; GID1C (GA INSENSITIVE DWARF1C); hydrolase||ATGID1A, GID1A; GID1A (GA INSENSITIVE DWARF1A); hydrolase | GO:0009739|response to gibberellin stimulus;GO:0016787|hydrolase activity;GO:0005634|nucleus;GO:0009939|positive regulation of gibberellic acid mediated signaling pathway;GO:0010476|gibberellin mediated signaling pathway;GO:0048444|floral organ morphogenesis;GO:0010325|raffinose family oligosaccharide biosynthetic process;GO:0005737|cytoplasm;GO:0005575|cellular_component | GhM_A08G2403.1,GhM_D08G2346.1,GhM_A08G2734.1,GhM_D08G2675.1,GhM_A11G1400.1,GhM_D11G1390.1,GhM_A11G3271.1,GhM_D13G2198.1,GhM_A12G0075.1,GhM_D12G0080.1,GhM_A13G2311.1,GhM_D11G3194.1 | 12 | 0 | Gossypium | Cotton | |||
| - | AT5G64370||AT4G21190 | BETA-UP; BETA-UP (beta-ureidopropionase); beta-ureidopropionase||emb1417; emb1417 (embryo defective 1417) | GO:0006807|nitrogen compound metabolic process;GO:0003674|molecular_function;GO:0009793|embryonic development ending in seed dormancy;GO:0003837|beta-ureidopropionase activity;GO:0005829|cytosol;GO:0006212|uracil catabolic process;GO:0043562|cellular response to nitrogen levels | GhM_A12G0179.1,GhM_D12G0188.1,GhM_D03G1228.1,GhM_D07G1177.1,GhM_D06G1503.1,GhM_D05G3763.1,GhM_D09G0602.1,GhM_D06G1502.1,GhM_D10G1830.1,GhM_D06G1847.1,GhM_D08G1248.1,GhM_D11G3685.1 | 12 | 0 | Gossypium | Cotton | |||
| TA1044:GhM_A05G3778.1,GhM_A05G3782.1,GhM_A05G3784.1 | - | - | - | GhM_D05G3760.1,GhM_D03G0776.1,GhM_A11G2985.1,GhM_A11G2989.1,GhM_D12G0913.1,GhM_A07G2367.1,GhM_D12G1372.1,GhM_A11G2988.1,GhM_D05G3762.1 | 12 | 1 | Gossypium | Cotton | |||
| TA1382:GhM_A12G1126.1,GhM_A12G1132.1 | AT5G50370||AT2G18980||AT5G63400 | ADK1; ADK1 (ADENYLATE KINASE 1); ATP binding / adenylate kinase/ nucleobase, nucleoside, nucleotide kinase/ nucleotide kinase/ phosphotransferase, phosphate group as acceptor||peroxidase, putative||adenylate kinase, putative | GO:0012505|endomembrane system;GO:0006139|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0009117|nucleotide metabolic process;GO:0005507|copper ion binding;GO:0006979|response to oxidative stress;GO:0046686|response to cadmium ion;GO:0020037|heme binding;GO:0005739|mitochondrion;GO:0004601|peroxidase activity;GO:0004017|adenylate kinase activity;GO:0005886|plasma membrane;GO:0009061|anaerobic respiration;GO:0009055|electron carrier activity | GhM_A08G1790.1,GhM_A08G2079.1,GhM_A11G2644.1,GhM_A01G1925.1,GhM_A07G0641.1,GhM_D12G2288.1,GhM_A12G2393.1,GhM_D09G2857.1,GhM_D01G1991.1,GhM_D07G0635.1 | 12 | 1 | Gossypium | Cotton | |||
| TA1852:GhM_D04G2083.1,GhM_D04G2084.1 | AT2G21160||AT5G07360 | amidase family protein||translocon-associated protein alpha (TRAP alpha) family protein | GO:0008150|biological_process;GO:0019256|acrylonitrile catabolic process;GO:0019330|aldoxime metabolic process;GO:0004040|amidase activity;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0009535|chloroplast thylakoid membrane;GO:0005773|vacuole;GO:0016884|carbon-nitrogen ligase activity, with glutamine as amido-N-donor | GhM_A01G2045.1,GhM_A03G2630.1,GhM_A04G1604.1,GhM_A12G0433.1,GhM_D01G2015.1,GhM_D02G2648.1,GhM_D12G0362.1,GhM_Scaf001G032.1,GhM_A12G2473.1,GhM_D12G2358.1 | 12 | 1 | Gossypium | Cotton | |||
| TA2915:GhM_A02G1480.1,GhM_A02G1483.1 | - | - | - | GhM_A11G0354.1,GhM_A02G0489.1,GhM_A08G1491.1,GhM_A11G2810.1,GhM_A01G2162.1,GhM_A01G1979.1,GhM_A13G0953.1,GhM_A05G1337.1,GhM_D06G1572.1,GhM_D08G2281.1 | 12 | 1 | Gossypium | Cotton | |||
| TA3017:GhM_A03G1931.1,GhM_A03G1933.1 | AT4G02210||AT2G24960 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1729.1,GhM_A09G0690.1,GhM_D08G1247.1,GhM_D08G0839.1,GhM_A01G1903.1,GhM_A03G0524.1,GhM_A03G1170.1,GhM_A08G1085.1,GhM_D11G2291.1,GhM_A07G2039.1 | 12 | 1 | Gossypium | Cotton | |||
| TA36:GhM_A02G0095.1,GhM_A02G0096.1,GhM_A02G0097.1,GhM_A02G0098.1,GhM_A02G0100.1,GhM_A02G0101.1,GhM_A02G0102.1,GhM_A02G0103.1,GhM_A02G0104.1,GhM_A02G0105.1,GhM_A02G0106.1 | - | - | - | GhM_D02G0108.1 | 12 | 1 | Gossypium | Cotton | |||
| TA505:GhM_A06G2076.1,GhM_A06G2078.1,GhM_A06G2079.1,GhM_A06G2081.1 | AT1G02205||AT2G37700 | catalytic/ iron ion binding / oxidoreductase||CER1; CER1 (ECERIFERUM 1); octadecanal decarbonylase | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0006633|fatty acid biosynthetic process;GO:0055114|oxidation reduction;GO:0005506|iron ion binding;GO:0005783|endoplasmic reticulum;GO:0016491|oxidoreductase activity | GhM_A05G3960.1,GhM_D06G2065.1,GhM_Scaf042G172.1,GhM_D04G0856.1,GhM_Scaf159G300.1,GhM_Scaf068G217.1,GhM_Scaf068G218.1,GhM_A06G2077.1 | 12 | 1 | Gossypium | Cotton | |||
| TA670:GhM_D02G0278.1,GhM_D02G0285.1,GhM_D02G0287.1 | AT3G25040||AT1G29330 | ATERD2, AERD2, ERD2; ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2); KDEL sequence binding / receptor||ER lumen protein retaining receptor, putative / HDEL receptor, putative | GO:0004872|receptor activity;GO:0006621|protein retention in ER lumen;GO:0010204|defense response signaling pathway, resistance gene-independent;GO:0005801|cis-Golgi network;GO:0005046|KDEL sequence binding;GO:0046923|ER retention sequence binding;GO:0005794|Golgi apparatus;GO:0015031|protein transport;GO:0016021|integral to membrane;GO:0005783|endoplasmic reticulum | GhM_A02G0257.1,GhM_A05G1717.1,GhM_A07G1955.1,GhM_A10G0365.1,GhM_A10G1536.1,GhM_D10G1579.1,GhM_D07G1908.1,GhM_D05G1727.1,GhM_D10G0353.1 | 12 | 1 | Gossypium | Cotton | |||
| TA114:GhM_D06G2337.1,GhM_D06G2338.1,GhM_D06G2339.1,GhM_D06G2340.1,GhM_D06G2341.1,GhM_D06G2342.1,GhM_D06G2344.1;TA2780:GhM_D13G0424.1,GhM_D13G0425.1 | AT1G80830||AT1G15960 | NRAMP1, PMIT1, ATNRAMP1; NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter||NRAMP6, ATNRAMP6; NRAMP6; inorganic anion transmembrane transporter/ metal ion transmembrane transporter | GO:0006875|cellular metal ion homeostasis;GO:0005384|manganese ion transmembrane transporter activity;GO:0005381|iron ion transmembrane transporter activity;GO:0015103|inorganic anion transmembrane transporter activity;GO:0006828|manganese ion transport;GO:0015691|cadmium ion transport;GO:0015692|lead ion transport;GO:0046873|metal ion transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0030001|metal ion transport;GO:0055071|manganese ion homeostasis | GhM_A06G0542.1,GhM_D06G0550.1,GhM_A06G2333.1 | 12 | 2 | Gossypium | Cotton | |||
| TA132:GhM_A11G0567.1,GhM_A11G0568.1,GhM_A11G0569.1,GhM_A11G0570.1,GhM_A11G0571.1,GhM_A11G0572.1;TA160:GhM_D11G0559.1,GhM_D11G0560.1,GhM_D11G0561.1,GhM_D11G0562.1,GhM_D11G0563.1,GhM_D11G0564.1 | AT5G67050||AT5G42930 | lipase class 3 family protein||triacylglycerol lipase | GO:0004806|triglyceride lipase activity;GO:0016020|membrane;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | - | 12 | 2 | Gossypium | Cotton | |||
| TA142:GhM_D01G1801.1,GhM_D01G1802.1,GhM_D01G1803.1,GhM_D01G1807.1,GhM_D01G1811.1,GhM_D01G1812.1;TA2162:GhM_A01G1811.1,GhM_A01G1812.1 | AT1G14870||AT1G68610 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: EGF-type aspartate/asparagine hydroxylation conserved site (InterPro:IPR000152), Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35525.1); Has 492 Blast hits to 491 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 76; Plants - 297; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | GO:0008150|biological_process;GO:0006979|response to oxidative stress;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_D02G1688.1,GhM_A03G1616.1,GhM_D05G4299.1,GhM_A01G1804.1 | 12 | 2 | Gossypium | Cotton | |||
| TA144:GhM_D04G0319.1,GhM_D04G0320.1,GhM_D04G0324.1,GhM_D04G0325.1,GhM_D04G0332.1,GhM_D04G0333.1;TA1049:GhM_A05G4613.1,GhM_A05G4617.1,GhM_A05G4621.1 | AT3G18770 | LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 13 (InterPro:IPR018731); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49590.2); Has 376 Blast hits to 291 proteins in 100 species: Archae - 0; Bacteria - 15; Metazoa - 70; Fungi - 108; Plants - 62; Viruses - 7; Other Eukaryotes - 114 (source: NCBI BLink). | GO:0009507|chloroplast | GhM_D05G3662.1,GhM_A12G0016.1,GhM_D12G0014.1 | 12 | 2 | Gossypium | Cotton | |||
| TA1575:GhM_D01G0711.1,GhM_D01G0716.1;TA2124:GhM_A01G0745.1,GhM_A01G0752.1 | AT4G27280||AT5G54490 | calcium-binding EF hand family protein||PBP1; PBP1 (PINOID-BINDING PROTEIN 1); calcium ion binding / protein binding | GO:0005515|protein binding;GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0005509|calcium ion binding | GhM_A04G0241.1,GhM_D05G4146.1,GhM_D08G0280.1,GhM_A08G0290.1,GhM_D06G1575.1,GhM_D13G1818.1,GhM_A13G1923.1,GhM_A06G1565.1 | 12 | 2 | Gossypium | Cotton | |||
| TA157:GhM_D08G2830.1,GhM_D08G2831.1,GhM_D08G2832.1,GhM_D08G2833.1,GhM_D08G2834.1,GhM_D08G2835.1;TA190:GhM_A08G2886.1,GhM_A08G2887.1,GhM_A08G2889.1,GhM_A08G2890.1,GhM_A08G2892.1,GhM_A08G2893.1 | AT5G17210||AT4G27435 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 12 | 2 | Gossypium | Cotton | |||
| TA1827:GhM_D04G1417.1,GhM_D04G1419.1;TA3076:GhM_A04G0964.1,GhM_A04G0965.1 | AT2G37040||AT3G53260 | pal1, ATPAL1; pal1 (Phe ammonia lyase 1); phenylalanine ammonia-lyase||PAL2, ATPAL2; PAL2; phenylalanine ammonia-lyase | GO:0006979|response to oxidative stress;GO:0009611|response to wounding;GO:0005737|cytoplasm;GO:0006952|defense response;GO:0045548|phenylalanine ammonia-lyase activity;GO:0009699|phenylpropanoid biosynthetic process | GhM_A01G2656.1,GhM_D09G1759.1,GhM_A09G1863.1,GhM_D01G2585.1,GhM_D11G3967.1,GhM_A11G4070.1,GhM_A10G2597.1,GhM_D10G2511.1 | 12 | 2 | Gossypium | Cotton | |||
| TA192:GhM_A09G1837.1,GhM_A09G1838.1,GhM_A09G1839.1,GhM_A09G1840.1,GhM_A09G1841.1,GhM_A09G1843.1;TA260:GhM_D09G1732.1,GhM_D09G1733.1,GhM_D09G1734.1,GhM_D09G1736.1,GhM_D09G1737.1 | AT3G09870 | auxin-responsive family protein | GO:0012505|endomembrane system;GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_D09G1735.1 | 12 | 2 | Gossypium | Cotton | |||
| TA2052:GhM_D06G1727.1,GhM_D06G1728.1;TA3305:GhM_A06G1710.1,GhM_A06G1712.1 | AT5G45820||AT4G18700 | CIPK20, SnRK3.6, PKS18; CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase/ protein serine/threonine kinase||CIPK12, SnRK3.9, ATWL4, WL4; CIPK12 (CBL-INTERACTING PROTEIN KINASE 12); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0009737|response to abscisic acid stimulus;GO:0006468|protein amino acid phosphorylation;GO:0007165|signal transduction;GO:0005829|cytosol;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D06G2549.1,GhM_D09G0955.1,GhM_A06G2556.1,GhM_A09G1021.1,GhM_A05G1738.1,GhM_A10G0388.1,GhM_D10G0376.1,GhM_D05G1746.1 | 12 | 2 | Gossypium | Cotton | |||
| TA207:GhM_A11G3179.1,GhM_A11G3180.1,GhM_A11G3181.1,GhM_A11G3186.1,GhM_A11G3187.1;TA450:GhM_D11G3104.1,GhM_D11G3105.1,GhM_D11G3108.1,GhM_D11G3109.1 | AT1G60690||AT1G60710||AT1G60680 | aldo/keto reductase family protein||ATB2; ATB2; oxidoreductase | GO:0009941|chloroplast envelope;GO:0046686|response to cadmium ion;GO:0055114|oxidation reduction;GO:0004033|aldo-keto reductase activity;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | GhM_A13G1420.1,GhM_D13G1323.1,GhM_A11G3182.1 | 12 | 2 | Gossypium | Cotton | |||
| TA2156:GhM_A01G1609.1,GhM_A01G1613.1;TA2672:GhM_D11G3903.1,GhM_D11G3904.1 | AT3G52580||AT3G11510||AT2G36160 | 40S ribosomal protein S14 (RPS14A)||40S ribosomal protein S14 (RPS14B)||40S ribosomal protein S14 (RPS14C) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_D01G1581.1,GhM_A08G0115.1,GhM_D08G0100.1,GhM_A09G1773.1,GhM_D04G1223.1,GhM_D09G1629.1,GhM_A03G1363.1,GhM_A08G0617.1 | 12 | 2 | Gossypium | Cotton | |||
| TA391:GhM_D05G3969.1,GhM_D05G3972.1,GhM_D05G3973.1,GhM_D05G3974.1;TA484:GhM_A04G0405.1,GhM_A04G0406.1,GhM_A04G0408.1,GhM_A04G0410.1 | AT3G47570||AT5G65700||AT3G47110||AT3G47580||AT1G73080||AT3G47090 | leucine-rich repeat transmembrane protein kinase, putative||PEPR1; PEPR1 (PEP1 receptor 1); ATP binding / kinase/ protein binding / protein serine/threonine kinase||BAM1; BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0048229|gametophyte development;GO:0010480|microsporocyte differentiation;GO:0048437|floral organ development;GO:0048653|anther development;GO:0045087|innate immune response;GO:0009611|response to wounding;GO:0009934|regulation of meristem structural organization;GO:0006468|protein amino acid phosphorylation;GO:0009753|response to jasmonic acid stimulus;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0010075|regulation of meristem growth;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D05G3893.1,GhM_A05G3293.1,GhM_A09G0495.1,GhM_D05G3971.1 | 12 | 2 | Gossypium | Cotton | |||
| TA407:GhM_D07G1753.1,GhM_D07G1755.1,GhM_D07G1756.1,GhM_D07G1757.1;TA509:GhM_A07G1790.1,GhM_A07G1791.1,GhM_A07G1792.1,GhM_A07G1794.1 | AT2G45400||AT5G42800 | DFR, TT3, M318; DFR (DIHYDROFLAVONOL 4-REDUCTASE); dihydrokaempferol 4-reductase||BEN1; BEN1; binding / catalytic/ coenzyme binding / oxidoreductase, acting on CH-OH group of donors | GO:0003824|catalytic activity;GO:0016614|oxidoreductase activity, acting on CH-OH group of donors;GO:0005488|binding;GO:0009718|anthocyanin biosynthetic process;GO:0010422|regulation of brassinosteroid biosynthetic process;GO:0005737|cytoplasm;GO:0050662|coenzyme binding;GO:0009813|flavonoid biosynthetic process;GO:0042406|extrinsic to endoplasmic reticulum membrane;GO:0045552|dihydrokaempferol 4-reductase activity;GO:0016131|brassinosteroid metabolic process | GhM_A05G0465.1,GhM_D05G0489.1,GhM_D05G0488.1,GhM_D07G1754.1 | 12 | 2 | Gossypium | Cotton | |||
| TA66:GhM_A09G2351.1,GhM_A09G2353.1,GhM_A09G2354.1,GhM_A09G2358.1,GhM_A09G2359.1,GhM_A09G2360.1,GhM_A09G2361.1,GhM_A09G2362.1,GhM_A09G2363.1;TA3575:GhM_A09G2352.1,GhM_A09G2357.1 | AT2G45580||AT2G45570||AT2G45560||AT3G61040||AT2G45550||AT1G33720 | CYP76C3; CYP76C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C2; CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C6; CYP76C6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C1; CYP76C1; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP76C7; CYP76C7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C4; CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D09G2250.1 | 12 | 2 | Gossypium | Cotton | |||
| TA843:GhM_D09G2001.1,GhM_D09G2004.1,GhM_D09G2005.1;TA1115:GhM_A09G2089.1,GhM_A09G2092.1,GhM_A09G2093.1 | AT3G48050 | DNA binding / protein binding / transcription regulator | GO:0005515|protein binding;GO:0030528|transcription regulator activity;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0006350|transcription | GhM_D12G3254.1,GhM_A12G3367.1,GhM_D11G0008.1,GhM_D09G2188.1,GhM_A09G2284.1,GhM_A11G0008.1 | 12 | 2 | Gossypium | Cotton | |||
| TA84:GhM_D10G2294.1,GhM_D10G2295.1,GhM_D10G2301.1,GhM_D10G2303.1,GhM_D10G2311.1,GhM_D10G2312.1,GhM_D10G2313.1,GhM_D10G2314.1;TA317:GhM_A10G2371.1,GhM_A10G2373.1,GhM_A10G2384.1,GhM_A10G2385.1 | AT4G08850 | kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0006468|protein amino acid phosphorylation | - | 12 | 2 | Gossypium | Cotton | |||
| TA1616:GhM_D01G2278.1,GhM_D01G2279.1;TA2184:GhM_A01G2328.1,GhM_A01G2329.1;TA1674:GhM_D02G0893.1,GhM_D02G0895.1 | AT1G78060 | glycosyl hydrolase family 3 protein | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0005618|cell wall | GhM_A05G3009.1,GhM_D05G3013.1,GhM_A02G0901.1,GhM_A02G0902.1,GhM_A05G2561.1,GhM_D05G2573.1 | 12 | 3 | Gossypium | Cotton | |||
| TA1623:GhM_D01G2629.1,GhM_D01G2630.1;TA3371:GhM_A07G0916.1,GhM_A07G0917.1;TA2226:GhM_D07G0917.1,GhM_D07G0919.1 | AT3G18080 | BGLU44; BGLU44 (B-S GLUCOSIDASE 44); (R)-amygdalin beta-glucosidase/ 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase/ beta-gentiobiose beta-glucosidase/ cellobiose glucosidase/ esculin beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0022626|cytosolic ribosome;GO:0009505|plant-type cell wall;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005618|cell wall;GO:0047668|amygdalin beta-glucosidase activity | GhM_A01G2684.1,GhM_A01G2701.1,GhM_A01G2728.1,GhM_D01G2612.1,GhM_D09G0684.1,GhM_D01G2656.1 | 12 | 3 | Gossypium | Cotton | |||
| TA2282:GhM_D07G2697.1,GhM_D07G2698.1;TA3416:GhM_A07G2792.1,GhM_A07G2794.1;TA2765:GhM_D13G0052.1,GhM_D13G0063.1 | AT3G28345 | ABC transporter family protein | GO:0005886|plasma membrane;GO:0006810|transport | GhM_A05G4328.1,GhM_D04G0610.1,GhM_A09G0316.1,GhM_D09G0289.1,GhM_A07G2793.1,GhM_A12G0656.1 | 12 | 3 | Gossypium | Cotton | |||
| TA2401:GhM_D09G1309.1,GhM_D09G1310.1;TA3060:GhM_A04G0430.1,GhM_A04G0431.1;TA3551:GhM_A09G1397.1,GhM_A09G1398.1 | AT3G13580||AT2G44120 | 60S ribosomal protein L7 (RPL7D)||60S ribosomal protein L7 (RPL7C) | GO:0030528|transcription regulator activity;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane;GO:0005773|vacuole | GhM_A07G1432.1,GhM_A08G0146.1,GhM_D13G2719.1,GhM_A13G2839.1,GhM_D08G0135.1,GhM_D07G1411.1 | 12 | 3 | Gossypium | Cotton | |||
| TA282:GhM_D13G1306.1,GhM_D13G1308.1,GhM_D13G1309.1,GhM_D13G1311.1,GhM_D13G1312.1;TA1495:GhM_A13G1433.1,GhM_A13G1434.1;TA3596:GhM_Scaf051G202.1,GhM_Scaf051G205.1 | AT5G17540||AT3G03480 | CHAT; CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase); acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase||transferase family protein | GO:0008150|biological_process;GO:0010327|acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0010597|green leaf volatile biosynthetic process;GO:0005575|cellular_component | GhM_A01G0009.1,GhM_Scaf050G197.1,GhM_Scaf050G198.1 | 12 | 3 | Gossypium | Cotton | |||
| TA341:GhM_A12G2815.1,GhM_A12G2816.1,GhM_A12G2817.1,GhM_A12G2819.1;TA456:GhM_D12G2704.1,GhM_D12G2705.1,GhM_D12G2706.1,GhM_D12G2708.1;TA897:GhM_D11G3634.1,GhM_D11G3635.1,GhM_D11G3636.1 | AT4G11650 | ATOSM34; ATOSM34 (osmotin 34) | GO:0012505|endomembrane system;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009651|response to salt stress;GO:0009817|defense response to fungus, incompatible interaction;GO:0051707|response to other organism | GhM_A11G3715.1 | 12 | 3 | Gossypium | Cotton | |||
| TA449:GhM_D11G2878.1,GhM_D11G2879.1,GhM_D11G2880.1,GhM_D11G2882.1;TA584:GhM_A11G2944.1,GhM_A11G2946.1,GhM_A11G2947.1;TA583:GhM_A11G2943.1,GhM_A11G2945.1,GhM_A11G2948.1 | AT5G48385||AT5G27240||AT5G16320||AT1G31814||AT5G27230 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).||FRL1; FRL1 (FRIGIDA LIKE 1)||INVOLVED IN: biological_process unknown; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 7968 Blast hits to 5791 proteins in 512 species: Archae - 158; Bacteria - 808; Metazoa - 2750; Fungi - 421; Plants - 1028; Viruses - 76; Other Eukaryotes - 2727 (source: NCBI BLink).||DNAJ heat shock N-terminal domain-containing protein||FRL2; FRL2 (FRIGIDA LIKE 2) | GO:0008150|biological_process;GO:0051082|unfolded protein binding;GO:0003674|molecular_function;GO:0006457|protein folding;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A02G1452.1,GhM_D03G0900.1 | 12 | 3 | Gossypium | Cotton | |||
| TA455:GhM_D12G2534.1,GhM_D12G2535.1,GhM_D12G2536.1,GhM_D12G2537.1;TA1428:GhM_A12G2646.1,GhM_A12G2647.1;TA1946:GhM_D05G2748.1,GhM_D05G2749.1 | AT1G17020||AT3G49620||AT4G25300||AT4G25310 | DIN11; DIN11 (DARK INDUCIBLE 11); iron ion binding / oxidoreductase||oxidoreductase, 2OG-Fe(II) oxygenase family protein||SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0009744|response to sucrose stimulus;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0010260|organ senescence;GO:0007568|aging;GO:0009416|response to light stimulus;GO:0005506|iron ion binding;GO:0009267|cellular response to starvation;GO:0009813|flavonoid biosynthetic process;GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A08G2105.1,GhM_D08G2058.1,GhM_D05G2750.1,GhM_D05G2751.1 | 12 | 3 | Gossypium | Cotton | |||
| TA506:GhM_A06G2398.1,GhM_A06G2399.1,GhM_A06G2400.1,GhM_A06G2402.1;TA3336:GhM_A06G2443.1,GhM_A06G2447.1;TA2082:GhM_D06G2445.1,GhM_D06G2447.1 | AT1G12290||AT1G12280||AT1G12220||AT1G61180||AT5G63020 | RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding||disease resistance protein (CC-NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0005622|intracellular;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A06G2401.1,GhM_A06G2403.1,GhM_D06G2476.1,GhM_D06G1832.1 | 12 | 3 | Gossypium | Cotton | |||
| TA1296:GhM_A11G3055.1,GhM_A11G3056.1;TA2624:GhM_D11G2984.1,GhM_D11G2987.1;TA1494:GhM_A13G1398.1,GhM_A13G1400.1;TA2810:GhM_D13G1291.1,GhM_D13G1293.1 | AT5G33370||AT5G18430||AT3G04290 | ATLTL1, LTL1; LTL1 (LI-TOLERANT LIPASE 1); carboxylesterase/ hydrolase, acting on ester bonds||GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0004091|carboxylesterase activity | GhM_A08G2785.1,GhM_A13G2233.1,GhM_D08G2729.1,GhM_D13G2121.1 | 12 | 4 | Gossypium | Cotton | |||
| TA1713:GhM_D02G2601.1,GhM_D02G2602.1;TA3033:GhM_A03G2575.1,GhM_A03G2576.1;TA1928:GhM_D05G2137.1,GhM_D05G2138.1;TA3168:GhM_A05G2116.1,GhM_A05G2117.1 | AT2G16430||AT2G27190 | PAP10, ATPAP10; PAP10 (PURPLE ACID PHOSPHATASE 10); acid phosphatase/ protein serine/threonine phosphatase||PAP1, ATPAP1, PAP12, ATPAP12; PAP12 (PURPLE ACID PHOSPHATASE 12); acid phosphatase/ protein serine/threonine phosphatase | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0003993|acid phosphatase activity;GO:0005618|cell wall;GO:0004722|protein serine/threonine phosphatase activity | GhM_A13G0349.1,GhM_D13G0340.1,GhM_A06G0069.1,GhM_D06G0066.1 | 12 | 4 | Gossypium | Cotton | |||
| TA2048:GhM_D06G1603.1,GhM_D06G1604.1;TA3303:GhM_A06G1638.1,GhM_A06G1639.1;TA3537:GhM_A09G0983.1,GhM_A09G0984.1;TA2388:GhM_D09G0919.1,GhM_D09G0920.1 | AT1G61250||AT2G20840||AT1G11180 | SC3; SC3 (SECRETORY CARRIER 3); transmembrane transporter||secretory carrier membrane protein (SCAMP) family protein | GO:0022857|transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A05G1846.1,GhM_D05G1858.1,GhM_A13G0641.1,GhM_D13G0724.1 | 12 | 4 | Gossypium | Cotton | |||
| TA217:GhM_A13G0219.1,GhM_A13G0220.1,GhM_A13G0221.1,GhM_A13G0222.1,GhM_A13G0223.1;TA3120:GhM_A05G0337.1,GhM_A05G0338.1;TA719:GhM_D05G0351.1,GhM_D05G0353.1,GhM_D05G0354.1;TA2772:GhM_D13G0207.1,GhM_D13G0208.1 | AT5G49690 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process | - | 12 | 4 | Gossypium | Cotton | |||
| TA544:GhM_A10G1772.1,GhM_A10G1774.1,GhM_A10G1775.1;TA859:GhM_D10G1358.1,GhM_D10G1359.1,GhM_D10G1362.1;TA1120:GhM_A09G2571.1,GhM_A09G2574.1,GhM_A09G2575.1;TA845:GhM_D09G2451.1,GhM_D09G2453.1,GhM_D09G2454.1 | AT3G54420 | ATEP3, ATCHITIV, CHIV; ATEP3; chitinase | GO:0005618|cell wall | - | 12 | 4 | Gossypium | Cotton | |||
| TA549:GhM_A10G2023.1,GhM_A10G2025.1,GhM_A10G2026.1;TA2894:GhM_A02G0535.1,GhM_A02G0536.1;TA1657:GhM_D02G0521.1,GhM_D02G0522.1;TA863:GhM_D10G1965.1,GhM_D10G1967.1,GhM_D10G1968.1 | AT5G18600||AT4G15670||AT3G21460 | electron carrier/ protein disulfide oxidoreductase||glutaredoxin family protein | GO:0015035|protein disulfide oxidoreductase activity;GO:0045454|cell redox homeostasis;GO:0008794|arsenate reductase (glutaredoxin) activity;GO:0005575|cellular_component;GO:0009055|electron carrier activity | GhM_A09G2927.1,GhM_D09G2792.1 | 12 | 4 | Gossypium | Cotton | |||
| TA802:GhM_D07G0584.1,GhM_D07G0585.1,GhM_D07G0586.1;TA3361:GhM_A07G0595.1,GhM_A07G0596.1;TA2740:GhM_D12G2329.1,GhM_D12G2330.1;TA1422:GhM_A12G2444.1,GhM_A12G2445.1 | AT5G23660||AT5G50790||AT5G50800 | MTN3; MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)||nodulin MtN3 family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A03G0728.1,GhM_D03G1377.1,GhM_A11G0466.1 | 12 | 4 | Gossypium | Cotton | |||
| TA1099:GhM_A08G2371.1,GhM_A08G2372.1,GhM_A08G2373.1;TA2339:GhM_D08G2316.1,GhM_D08G2317.1;TA1434:GhM_A12G2832.1,GhM_A12G2834.1;TA2747:GhM_D12G2719.1,GhM_D12G2721.1;TA2545:GhM_D11G0240.1,GhM_D11G0241.1 | AT5G41210||AT5G41240||AT2G30860 | ATGSTT2, GST10B; ATGSTT2 (GLUTATHIONE S-TRANSFERASE THETA 2); glutathione transferase||ATGSTT1, GST10, GSTU12; ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1); glutathione transferase||ATGSTF9, GLUTTR, ATGSTF7; ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase | GO:0005507|copper ion binding;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0010043|response to zinc ion;GO:0046686|response to cadmium ion;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0006952|defense response;GO:0004602|glutathione peroxidase activity;GO:0043295|glutathione binding;GO:0005886|plasma membrane;GO:0042742|defense response to bacterium;GO:0005773|vacuole | GhM_A11G0246.1 | 12 | 5 | Gossypium | Cotton | |||
| - | AT1G20080||AT2G20990||AT2G21010 | C2 domain-containing protein||SYTA, NTMC2TYPE1.1, ATSYTA, NTMC2T1.1, SYT1; SYTA (SYNAPTOTAGMIN A)||SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2; SYTB | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0006612|protein targeting to membrane;GO:0016020|membrane;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A01G0051.1,GhM_D01G0032.1,GhM_A02G1067.1,GhM_D02G1101.1,GhM_A03G2355.1,GhM_D02G2373.1,GhM_D12G2624.1,GhM_D05G3432.1,GhM_D06G1830.1,GhM_A05G2072.1,GhM_D05G2088.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G18500||AT1G56720||AT3G59110 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0333.1,GhM_D01G0317.1,GhM_A02G0666.1,GhM_D02G0657.1,GhM_A09G2949.1,GhM_A11G3452.1,GhM_A05G4525.1,GhM_D04G0421.1,GhM_D11G3364.1,GhM_D11G3363.1,GhM_D09G2810.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G65770 | LINC4; LINC4 (LITTLE NUCLEI4) | GO:0009507|chloroplast | GhM_A01G0803.1,GhM_D02G0296.1,GhM_A03G0149.1,GhM_A13G1098.1,GhM_A03G0150.1,GhM_A11G1296.1,GhM_D06G1859.1,GhM_A11G2513.1,GhM_A02G1938.1,GhM_D03G0330.1,GhM_D11G2378.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT4G26700||AT5G35700||AT5G55400 | FIM2; FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding||fimbrin-like protein, putative||ATFIM1, FIM1; ATFIM1; actin binding | GO:0008150|biological_process;GO:0003779|actin binding;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A01G0917.1,GhM_D01G0875.1,GhM_A07G1045.1,GhM_D07G1034.1,GhM_A07G2438.1,GhM_D07G2345.1,GhM_D07G2346.1,GhM_Scaf214G334.1,GhM_Scaf214G335.1,GhM_A11G3480.1,GhM_D11G3393.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G12670||AT4G02120||AT1G30820 | emb2742; emb2742 (embryo defective 2742); CTP synthase/ catalytic||CTP synthase, putative / UTP--ammonia ligase, putative | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0003883|CTP synthase activity;GO:0006221|pyrimidine nucleotide biosynthetic process;GO:0009218|pyrimidine ribonucleotide metabolic process | GhM_A01G1095.1,GhM_D01G1057.1,GhM_A08G0519.1,GhM_D08G0497.1,GhM_A11G1305.1,GhM_D11G1308.1,GhM_A12G0565.1,GhM_D12G0557.1,GhM_A13G1735.1,GhM_D13G1613.1,GhM_D02G1852.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G47820 | FRA1; FRA1 (FRAGILE FIBER 1); microtubule motor | GO:0010215|cellulose microfibril organization;GO:0003777|microtubule motor activity;GO:0005737|cytoplasm | GhM_A01G1362.1,GhM_D01G1331.1,GhM_A05G2304.1,GhM_A02G2008.1,GhM_D03G0260.1,GhM_A06G0215.1,GhM_D06G0220.1,GhM_A06G0216.1,GhM_D05G2320.1,GhM_A11G2288.1,GhM_D11G2256.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G36530||AT5G51600 | LOS2; LOS2; copper ion binding / phosphopyruvate hydratase||PLE, ATMAP65-3, MAP65-3; PLE (PLEIADE); microtubule binding | GO:0005740|mitochondrial envelope;GO:0046686|response to cadmium ion;GO:0004634|phosphopyruvate hydratase activity;GO:0000278|mitotic cell cycle;GO:0009524|phragmoplast;GO:0000226|microtubule cytoskeleton organization;GO:0005886|plasma membrane;GO:0000280|nuclear division;GO:0009624|response to nematode;GO:0008017|microtubule binding;GO:0005739|mitochondrion;GO:0000911|cytokinesis by cell plate formation;GO:0016020|membrane;GO:0052096|formation by symbiont of syncytium involving giant cell for nutrient acquisition from host;GO:0009737|response to abscisic acid stimulus;GO:0046785|microtubule polymerization;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0009416|response to light stimulus;GO:0009651|response to salt stress;GO:0005874|microtubule;GO:0055028|cortical microtubule;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0051322|anaphase;GO:0009574|preprophase band;GO:0009409|response to cold | GhM_A01G1634.1,GhM_A01G2604.1,GhM_D01G2532.1,GhM_A07G0495.1,GhM_D07G0489.1,GhM_A07G0496.1,GhM_D09G0593.1,GhM_A09G0645.1,GhM_A09G1724.1,GhM_D09G1677.1,GhM_D04G1320.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G08280 | glycosyl transferase family 29 protein / sialyltransferase family protein | GO:0012505|endomembrane system;GO:0030173|integral to Golgi membrane;GO:0006486|protein amino acid glycosylation;GO:0016020|membrane;GO:0008373|sialyltransferase activity | GhM_A01G1679.1,GhM_D01G1676.1,GhM_A05G0905.1,GhM_A01G2022.1,GhM_D05G0923.1,GhM_A07G1317.1,GhM_D07G1297.1,GhM_D05G0922.1,GhM_A08G0104.1,GhM_D08G0090.1,GhM_A08G1918.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G49980 | AFB5; AFB5 (Auxin F-Box protein 5); ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity | GhM_A01G1758.1,GhM_A06G2153.1,GhM_A06G0536.1,GhM_A03G1835.1,GhM_A06G1785.1,GhM_A05G4090.1,GhM_A10G1219.1,GhM_D05G2496.1,GhM_A05G2483.1,GhM_A06G0363.1,GhM_D06G0373.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G28490||AT2G20420 | succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative||SYP61, ATSYP61, OSM1; SYP61 (SYNTAXIN OF PLANTS 61); SNAP receptor | GO:0004776|succinate-CoA ligase (GDP-forming) activity;GO:0005507|copper ion binding;GO:0008152|metabolic process;GO:0006944|cellular membrane fusion;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0006886|intracellular protein transport;GO:0030140|trans-Golgi network transport vesicle;GO:0005524|ATP binding;GO:0005484|SNAP receptor activity | GhM_A01G2074.1,GhM_A05G1782.1,GhM_D05G1797.1,GhM_A09G1014.1,GhM_D09G0948.1,GhM_A10G0312.1,GhM_D10G0297.1,GhM_A10G2488.1,GhM_A10G1356.1,GhM_A11G1975.1,GhM_A12G0585.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G05580||AT3G11170||AT2G29980 | FAD3; FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase||FAD8; FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase||FAD7, FADD; FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006633|fatty acid biosynthetic process;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0042389|omega-3 fatty acid desaturase activity;GO:0009266|response to temperature stimulus;GO:0005783|endoplasmic reticulum | GhM_A01G2804.1,GhM_D01G2728.1,GhM_A04G1193.1,GhM_D04G1669.1,GhM_A07G1256.1,GhM_D07G1236.1,GhM_A09G1199.1,GhM_D09G1131.1,GhM_A10G2981.1,GhM_D10G2930.1,GhM_A13G0761.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G38310 | unknown protein | GO:0003674|molecular_function | GhM_A01G2836.1,GhM_D01G2761.1,GhM_A05G3503.1,GhM_D05G3450.1,GhM_A06G2120.1,GhM_D06G2099.1,GhM_A09G2062.1,GhM_D09G1967.1,GhM_A10G2987.1,GhM_D10G2939.1,GhM_Scaf001G037.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G51630||AT5G58350||AT3G04910 | WNK4, ZIK2; WNK4 (WITH NO K (=LYSINE) 4); kinase/ protein kinase||WNK5, ZIK1, ATWNK5; WNK5 (WITH NO LYSINE (K) KINASE 5); protein kinase||WNK1, ZIK4, ATWNK1; WNK1 (WITH NO LYSINE (K) 1); kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0007623|circadian rhythm;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005575|cellular_component;GO:0048573|photoperiodism, flowering;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0043.1,GhM_D02G0052.1,GhM_A10G1862.1,GhM_D10G1278.1,GhM_D13G2909.1,GhM_A13G3001.1,GhM_D11G3130.1,GhM_A11G3212.1,GhM_A02G0342.1,GhM_D02G0363.1,GhM_A11G3213.1 | 11 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G0404.1,GhM_A12G0973.1,GhM_A03G1662.1,GhM_A12G2443.1,GhM_A04G1073.1,GhM_A13G1256.1,GhM_A11G1227.1,GhM_A06G2320.1,GhM_D06G2325.1,GhM_A10G2345.1,GhM_D10G2266.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT4G27090||AT2G20450 | 60S ribosomal protein L14 (RPL14A)||60S ribosomal protein L14 (RPL14B) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005783|endoplasmic reticulum;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0042254|ribosome biogenesis;GO:0005773|vacuole | GhM_A02G0452.1,GhM_D02G0446.1,GhM_A05G2862.1,GhM_D01G0246.1,GhM_A07G1575.1,GhM_A08G2296.1,GhM_A09G0843.1,GhM_D09G0786.1,GhM_A11G1552.1,GhM_D11G1546.1,GhM_D13G1313.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G62270||AT2G47160 | BOR1; BOR1 (REQUIRES HIGH BORON 1); anion exchanger/ boron transporter||anion exchange family protein | GO:0046713|boron transport;GO:0006820|anion transport;GO:0043674|columella;GO:0016328|lateral plasma membrane;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0046715|boron transmembrane transporter activity;GO:0005768|endosome;GO:0015380|anion exchanger activity;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A02G0647.1,GhM_D02G0644.1,GhM_A03G1280.1,GhM_D02G1388.1,GhM_A09G2946.1,GhM_D09G2807.1,GhM_A11G0012.1,GhM_D11G0014.1,GhM_A12G1598.1,GhM_D12G1545.1,GhM_D08G1603.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G43170||AT1G61580 | RPL3B, ARP2; RPL3B (R-PROTEIN L3 B); structural constituent of ribosome||ARP1, emb2207, RPL3A; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0009793|embryonic development ending in seed dormancy;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A02G0741.1,GhM_A05G2744.1,GhM_A02G0742.1,GhM_A05G3048.1,GhM_A04G1757.1,GhM_D04G2235.1,GhM_D01G1529.1,GhM_D05G2742.1,GhM_D01G2259.1,GhM_D05G3048.1,GhM_D02G0734.1 | 11 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G0812.1,GhM_A13G1417.1,GhM_A09G0510.1,GhM_A06G1648.1,GhM_A12G2278.1,GhM_A12G0961.1,GhM_A13G2043.1,GhM_D09G0868.1,GhM_A12G1631.1,GhM_A11G3499.1,GhM_A10G1938.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G22060 | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G22000.1); Has 67094 Blast hits to 30189 proteins in 1408 species: Archae - 880; Bacteria - 6261; Metazoa - 35085; Fungi - 5326; Plants - 2622; Viruses - 293; Other Eukaryotes - 16627 (source: NCBI BLink). | GO:0005773|vacuole | GhM_A02G0892.1,GhM_D02G0888.1,GhM_A02G0893.1,GhM_A06G0461.1,GhM_A02G0895.1,GhM_D06G0435.1,GhM_D06G0474.1,GhM_A02G0894.1,GhM_D06G0434.1,GhM_D06G0437.1,GhM_A02G0896.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G78080||AT4G39780 | RAP2.4; RAP2.4 (related to AP2 4); DNA binding / transcription factor||AP2 domain-containing transcription factor, putative | GO:0009873|ethylene mediated signaling pathway;GO:0010017|red or far-red light signaling pathway;GO:0005634|nucleus;GO:0006970|response to osmotic stress;GO:0006355|regulation of transcription, DNA-dependent;GO:0009416|response to light stimulus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation | GhM_A02G0903.1,GhM_D02G0896.1,GhM_A06G0425.1,GhM_D06G0449.1,GhM_A05G2559.1,GhM_D05G2571.1,GhM_A12G1253.1,GhM_A02G1879.1,GhM_D03G0383.1,GhM_A11G2351.1,GhM_D11G2550.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G45620||AT1G31160 | zinc-binding protein, putative / protein kinase C inhibitor, putative||nucleotidyltransferase family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0016779|nucleotidyltransferase activity;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0005080|protein kinase C binding | GhM_A02G1034.1,GhM_A11G0958.1,GhM_A04G1002.1,GhM_D11G0973.1,GhM_A13G1571.1,GhM_D06G1741.1,GhM_A12G1364.1,GhM_D12G1303.1,GhM_D07G1821.1,GhM_D12G2214.1,GhM_D12G1153.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G59140 | ATMRP14; ATMRP14; ATPase, coupled to transmembrane movement of substances | GO:0005886|plasma membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport | GhM_A02G1277.1,GhM_D03G0965.1,GhM_D11G0151.1,GhM_A12G3103.1,GhM_A11G0153.1,GhM_D12G2989.1,GhM_A11G0154.1,GhM_D11G0152.1,GhM_A12G3102.1,GhM_D11G0149.1,GhM_D11G0150.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G64110||AT4G28000||AT5G52882 | AAA-type ATPase family protein||ATP binding / nucleoside-triphosphatase/ nucleotide binding||ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A02G1296.1,GhM_D03G0945.1,GhM_A09G2321.1,GhM_D09G2223.1,GhM_A12G3115.1,GhM_A05G4899.1,GhM_D04G0049.1,GhM_D11G0144.1,GhM_A11G0148.1,GhM_D12G3000.1,GhM_D04G0048.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G21640||AT1G77350 | unknown protein||NADK2, ATNADK2; NADK2; NAD+ kinase/ calmodulin binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003951|NAD+ kinase activity;GO:0008152|metabolic process;GO:0003674|molecular_function;GO:0005516|calmodulin binding;GO:0019363|pyridine nucleotide biosynthetic process | GhM_A02G1391.1,GhM_D03G0752.1,GhM_A05G2659.1,GhM_D05G2671.1,GhM_A05G2660.1,GhM_A05G4048.1,GhM_A11G2498.1,GhM_A13G1264.1,GhM_D05G2670.1,GhM_D09G1538.1,GhM_A09G1637.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT4G39350||AT5G64740 | CESA6, IXR2, E112, PRC1; CESA6 (CELLULOSE SYNTHASE 6); cellulose synthase/ transferase, transferring glycosyl groups||CESA2, ATH-A, ATCESA2; CESA2 (CELLULOSE SYNTHASE A2); cellulose synthase/ transferase, transferring glycosyl groups | GO:0010330|cellulose synthase complex;GO:0016759|cellulose synthase activity;GO:0043622|cortical microtubule organization;GO:0010583|response to cyclopentenone;GO:0016049|cell growth;GO:0010005|cortical microtubule, transverse to long axis;GO:0009833|primary cell wall biogenesis;GO:0030244|cellulose biosynthetic process;GO:0005794|Golgi apparatus;GO:0009832|plant-type cell wall biogenesis;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_A02G1793.1,GhM_D03G0516.1,GhM_A05G2742.1,GhM_D05G2739.1,GhM_A06G1406.1,GhM_D06G1435.1,GhM_A11G2652.1,GhM_D11G2597.1,GhM_A12G1108.1,GhM_D12G1143.1,GhM_D03G1540.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G15790 | SQN, CYP40; SQN (SQUINT); peptidyl-prolyl cis-trans isomerase | GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0010582|floral meristem determinacy;GO:0005737|cytoplasm;GO:0010050|vegetative phase change | GhM_A02G2047.1,GhM_D03G0214.1,GhM_A03G2505.1,GhM_D02G2528.1,GhM_A10G1056.1,GhM_D10G1030.1,GhM_A12G0816.1,GhM_A13G0421.1,GhM_D13G0403.1,GhM_D12G0801.1,GhM_D12G0800.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT4G36640||AT2G25737||AT1G75170 | unknown protein||SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | GO:0012505|endomembrane system;GO:0006810|transport;GO:0005622|intracellular;GO:0005215|transporter activity;GO:0016021|integral to membrane | GhM_A02G2117.1,GhM_D03G0150.1,GhM_A11G0539.1,GhM_A05G2172.1,GhM_D05G2195.1,GhM_A06G0109.1,GhM_D06G0107.1,GhM_D11G0525.1,GhM_D11G0526.1,GhM_A11G2154.1,GhM_D11G2124.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT4G29510 | ATPRMT11, PRMT11, ATPRMT1B, PRMT1B; PRMT11 (ARGININE METHYLTRANSFERASE 11); protein-arginine N-methyltransferase | GO:0005634|nucleus;GO:0016274|protein-arginine N-methyltransferase activity | GhM_A03G0280.1,GhM_D11G1635.1,GhM_A05G0310.1,GhM_D06G0849.1,GhM_A08G2814.1,GhM_A11G2491.1,GhM_A09G1190.1,GhM_A09G2572.1,GhM_D05G0324.1,GhM_D09G0426.1,GhM_D13G0884.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G63690||AT1G01650||AT1G01690 | unknown protein||protease-associated (PA) domain-containing protein||aspartic-type endopeptidase/ peptidase | GO:0008233|peptidase activity;GO:0012505|endomembrane system;GO:0009555|pollen development;GO:0003674|molecular_function;GO:0042138|meiotic DNA double-strand break formation;GO:0005768|endosome;GO:0009553|embryo sac development;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0051026|chiasma assembly;GO:0016021|integral to membrane | GhM_A03G0298.1,GhM_D03G1826.1,GhM_A07G1741.1,GhM_D07G1712.1,GhM_A08G1785.1,GhM_D11G1045.1,GhM_A11G1033.1,GhM_A12G2849.1,GhM_D12G2735.1,GhM_D08G1740.1,GhM_A08G1784.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G28320||AT3G54800 | pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein | GO:0005886|plasma membrane;GO:0007165|signal transduction;GO:0035091|phosphoinositide binding | GhM_A03G0463.1,GhM_D05G1163.1,GhM_A05G1146.1,GhM_D03G1667.1,GhM_A08G2577.1,GhM_D08G2516.1,GhM_D10G1880.1,GhM_A05G3373.1,GhM_D05G3345.1,GhM_A06G2224.1,GhM_D06G2201.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G20770 | EIN3; EIN3 (ETHYLENE-INSENSITIVE3); transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0010182|sugar mediated signaling pathway;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009723|response to ethylene stimulus;GO:0042742|defense response to bacterium | GhM_A03G0487.1,GhM_D03G1641.1,GhM_A03G0488.1,GhM_A05G1116.1,GhM_D05G1133.1,GhM_A08G2552.1,GhM_D08G2485.1,GhM_A13G2941.1,GhM_D13G2844.1,GhM_D07G2027.1,GhM_D12G0881.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G57490||AT1G58380||AT2G41840 | 40S ribosomal protein S2 (RPS2C)||XW6; XW6; structural constituent of ribosome||40S ribosomal protein S2 (RPS2D) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0005840|ribosome;GO:0005622|intracellular;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A03G0917.1,GhM_D03G1158.1,GhM_A07G0835.1,GhM_D07G0834.1,GhM_A09G1465.1,GhM_D09G1368.1,GhM_A11G0413.1,GhM_D11G0396.1,GhM_A12G2301.1,GhM_D12G2192.1,GhM_A12G2300.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G05230||AT4G04890 | PDF2; PDF2 (PROTODERMAL FACTOR 2); DNA binding / transcription factor||HDG2; HDG2 (HOMEODOMAIN GLABROUS 2); DNA binding / transcription factor | GO:0005634|nucleus;GO:0010090|trichome morphogenesis;GO:0048825|cotyledon development;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009913|epidermal cell differentiation | GhM_A03G1464.1,GhM_D13G1015.1,GhM_A06G1934.1,GhM_D06G1919.1,GhM_A10G0165.1,GhM_D10G0152.1,GhM_A12G2027.1,GhM_D12G1935.1,GhM_A13G1247.1,GhM_D02G1579.1,GhM_D12G0575.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G24400||AT5G40780 | LHT2, AATL2; LHT2 (LYSINE HISTIDINE TRANSPORTER 2); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter||LTH1; LHT1; amino acid transmembrane transporter | GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0043090|amino acid import;GO:0015172|acidic amino acid transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015175|neutral amino acid transmembrane transporter activity;GO:0016020|membrane | GhM_A03G1738.1,GhM_D02G1821.1,GhM_A05G4044.1,GhM_D04G0935.1,GhM_A05G4045.1,GhM_D09G0421.1,GhM_A07G2900.1,GhM_D07G2803.1,GhM_A09G0461.1,GhM_A11G0448.1,GhM_D11G0429.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G57610||AT1G09575 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G2023.1,GhM_A13G0006.1,GhM_A08G0016.1,GhM_D08G0009.1,GhM_A11G0006.1,GhM_D11G0006.1,GhM_D08G0002.1,GhM_D11G4030.1,GhM_D08G3166.1,GhM_D10G0005.1,GhM_D10G0006.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G53035||AT3G15358 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G2095.1,GhM_D02G2120.1,GhM_A05G1819.1,GhM_D05G1834.1,GhM_A06G1685.1,GhM_D05G3885.1,GhM_A10G0280.1,GhM_D10G0264.1,GhM_D06G1646.1,GhM_D12G1748.1,GhM_A12G1808.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G65440||AT1G63210 | GTB1; GTB1; RNA binding / hydrolase, acting on ester bonds / transcription elongation regulator||RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulator | GO:0003723|RNA binding;GO:0005515|protein binding;GO:0006139|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0006357|regulation of transcription from RNA polymerase II promoter;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006333|chromatin assembly or disassembly;GO:0006352|transcription initiation;GO:0003711|transcription elongation regulator activity;GO:0005575|cellular_component | GhM_A03G2275.1,GhM_A11G1625.1,GhM_A05G3241.1,GhM_A12G1122.1,GhM_A05G4719.1,GhM_A10G1278.1,GhM_A11G2324.1,GhM_A11G2325.1,GhM_A08G1311.1,GhM_A07G2126.1,GhM_D06G1143.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G34750||AT1G22280 | protein phosphatase 2C, putative / PP2C, putative | GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0005634|nucleus;GO:0004721|phosphoprotein phosphatase activity;GO:0010161|red light signaling pathway;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A03G2308.1,GhM_D02G2333.1,GhM_A04G1477.1,GhM_D04G1968.1,GhM_A05G2537.1,GhM_D05G2546.1,GhM_A06G0403.1,GhM_D06G0408.1,GhM_D03G1205.1,GhM_D05G3474.1,GhM_D13G1034.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G47030 | ATP synthase delta' chain, mitochondrial | GO:0005753|mitochondrial proton-transporting ATP synthase complex;GO:0000275|mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);GO:0046933|hydrogen ion transporting ATP synthase activity, rotational mechanism;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0008270|zinc ion binding | GhM_A03G2442.1,GhM_A08G0719.1,GhM_A06G1325.1,GhM_D08G1841.1,GhM_A07G1987.1,GhM_D08G0687.1,GhM_A08G1890.1,GhM_D12G2551.1,GhM_A11G2908.1,GhM_A12G2662.1,GhM_D11G2595.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G16460 | metal ion binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0046872|metal ion binding;GO:0005739|mitochondrion | GhM_A03G2587.1,GhM_D02G2614.1,GhM_A11G2079.1,GhM_D11G2061.1,GhM_A13G0337.1,GhM_D13G0324.1,GhM_D06G1536.1,GhM_D05G0463.1,GhM_D06G1922.1,GhM_A12G0697.1,GhM_D12G0692.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G19910 | AVA-P2, AVA-2PE, ATVHA-C2; AVA-P2; ATPase/ proton-transporting ATPase, rotational mechanism | GO:0016887|ATPase activity;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0015986|ATP synthesis coupled proton transport;GO:0005886|plasma membrane;GO:0000220|vacuolar proton-transporting V-type ATPase, V0 domain;GO:0005773|vacuole | GhM_A03G2594.1,GhM_A11G0510.1,GhM_A04G1609.1,GhM_D03G0107.1,GhM_A11G2068.1,GhM_D02G2620.1,GhM_A13G1099.1,GhM_D04G2089.1,GhM_D13G1120.1,GhM_D11G0492.1,GhM_D11G2048.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G24740 | INVOLVED IN: protein localization; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein (InterPro:IPR009543); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1782 Blast hits to 981 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 1018; Fungi - 290; Plants - 104; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink). | GO:0008104|protein localization | GhM_A04G0369.1,GhM_A08G0780.1,GhM_A05G2226.1,GhM_A12G1956.1,GhM_A05G4399.1,GhM_A07G2454.1,GhM_A05G4701.1,GhM_D04G0239.1,GhM_A06G1586.1,GhM_A08G0950.1,GhM_A11G1517.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G53620||AT1G01050 | AtPPa4; AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase||AtPPa1; AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase | GO:0004427|inorganic diphosphatase activity;GO:0008152|metabolic process;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0006796|phosphate metabolic process;GO:0016020|membrane | GhM_A04G1052.1,GhM_D04G1510.1,GhM_A07G1629.1,GhM_D07G1597.1,GhM_A09G1966.1,GhM_D09G1862.1,GhM_A12G0730.1,GhM_A12G1541.1,GhM_D12G1490.1,GhM_D08G1632.1,GhM_D12G0720.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G49560||AT3G25790 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_A04G1578.1,GhM_D04G2054.1,GhM_A13G0418.1,GhM_A10G0950.1,GhM_A09G2858.1,GhM_D11G0514.1,GhM_A10G1692.1,GhM_D13G0401.1,GhM_A12G0280.1,GhM_D12G0286.1,GhM_D12G1268.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G67280||AT1G11840 | ATGLX1; ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding||lactoylglutathione lyase, putative / glyoxalase I, putative | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005777|peroxisome;GO:0031977|thylakoid lumen;GO:0005975|carbohydrate metabolic process;GO:0046686|response to cadmium ion;GO:0005886|plasma membrane;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0046872|metal ion binding;GO:0004462|lactoylglutathione lyase activity;GO:0010319|stromule;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A05G0272.1,GhM_D05G0282.1,GhM_A06G0772.1,GhM_D06G0773.1,GhM_A08G3112.1,GhM_A06G1968.1,GhM_D06G1951.1,GhM_A06G2620.1,GhM_D06G2611.1,GhM_D08G3043.1,GhM_D06G1155.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G13490||AT4G28390 | AAC3, ATAAC3; AAC3 (ADP/ATP CARRIER 3); ATP:ADP antiporter/ binding||AAC2; AAC2 (ADP/ATP carrier 2); ATP:ADP antiporter/ binding | GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005515|protein binding;GO:0005740|mitochondrial envelope;GO:0006810|transport;GO:0005488|binding;GO:0005739|mitochondrion;GO:0006839|mitochondrial transport;GO:0015865|purine nucleotide transport;GO:0005471|ATP:ADP antiporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A05G0751.1,GhM_D05G0775.1,GhM_A07G1511.1,GhM_D08G1896.1,GhM_A08G0689.1,GhM_D08G0658.1,GhM_A08G1948.1,GhM_A12G1815.1,GhM_D12G1754.1,GhM_D05G1832.1,GhM_A08G1949.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G19860||AT4G29130 | ATHXK1, GIN2, HXK1; HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase||ATHXK2, HXK2; HXK2 (HEXOKINASE 2); ATP binding / fructokinase/ glucokinase/ hexokinase | GO:0012501|programmed cell death;GO:0004340|glucokinase activity;GO:0009536|plastid;GO:0005634|nucleus;GO:0010255|glucose mediated signaling pathway;GO:0005739|mitochondrion;GO:0010182|sugar mediated signaling pathway;GO:0005886|plasma membrane;GO:0004396|hexokinase activity;GO:0019320|hexose catabolic process;GO:0008865|fructokinase activity;GO:0009747|hexokinase-dependent signaling;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0005773|vacuole | GhM_A05G1470.1,GhM_D05G1484.1,GhM_A06G0798.1,GhM_A13G2576.1,GhM_A09G1097.1,GhM_D09G1032.1,GhM_A10G0721.1,GhM_D10G0700.1,GhM_D06G0803.1,GhM_D13G2490.1,GhM_D10G0701.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT1G31300||AT4G19645 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19645.2); Has 478 Blast hits to 478 proteins in 104 species: Archae - 0; Bacteria - 0; Metazoa - 269; Fungi - 98; Plants - 80; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology (InterPro:IPR006634); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31300.2); Has 401 Blast hits to 401 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 186; Fungi - 102; Plants - 84; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | GO:0008150|biological_process;GO:0016021|integral to membrane;GO:0003674|molecular_function | GhM_A05G1610.1,GhM_D05G1625.1,GhM_A10G0514.1,GhM_A05G4535.1,GhM_D09G0099.1,GhM_A09G0099.1,GhM_A11G0724.1,GhM_D11G0732.1,GhM_D04G0411.1,GhM_D10G0488.1,GhM_D10G1418.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G54960||AT5G01320||AT4G33070 | pyruvate decarboxylase, putative||PDC2; PDC2 (pyruvate decarboxylase-2); carboxy-lyase/ catalytic/ magnesium ion binding / pyruvate decarboxylase/ thiamin pyrophosphate binding | GO:0000287|magnesium ion binding;GO:0004737|pyruvate decarboxylase activity;GO:0003824|catalytic activity;GO:0030976|thiamin pyrophosphate binding;GO:0016831|carboxy-lyase activity;GO:0016740|transferase activity;GO:0016020|membrane;GO:0005575|cellular_component;GO:0001666|response to hypoxia | GhM_A05G1764.1,GhM_D09G1956.1,GhM_A08G0020.1,GhM_D08G0014.1,GhM_A09G2053.1,GhM_D10G0321.1,GhM_A10G0332.1,GhM_D05G1776.1,GhM_D13G0184.1,GhM_A10G0333.1,GhM_D05G1777.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G11130||AT3G08530 | clathrin heavy chain, putative | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0009507|chloroplast;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G3498.1,GhM_A05G3917.1,GhM_A05G3499.1,GhM_A10G3006.1,GhM_A06G2133.1,GhM_D06G2112.1,GhM_A13G0182.1,GhM_D13G0171.1,GhM_D04G0815.1,GhM_D10G2958.1,GhM_D05G3445.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT5G11800||AT5G51710||AT2G19600||AT5G51690 | ACS12; ACS12; 1-aminocyclopropane-1-carboxylate synthase/ L-aspartate:2-oxoglutarate aminotransferase/ aromatic-amino-acid:2-oxoglutarate aminotransferase||KEA5, ATKEA5; KEA5; potassium ion transmembrane transporter/ potassium:hydrogen antiporter||KEA6, ATKEA6; KEA6; potassium ion transmembrane transporter/ potassium:hydrogen antiporter||ATKEA4, KEA4; ATKEA4; potassium ion transmembrane transporter/ potassium:hydrogen antiporter | GO:0012505|endomembrane system;GO:0009693|ethylene biosynthetic process;GO:0006519|cellular amino acid and derivative metabolic process;GO:0008793|aromatic-amino-acid:2-oxoglutarate aminotransferase activity;GO:0015386|potassium:hydrogen antiporter activity;GO:0004069|L-aspartate:2-oxoglutarate aminotransferase activity;GO:0006813|potassium ion transport;GO:0006812|cation transport;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0015079|potassium ion transmembrane transporter activity | GhM_A06G1071.1,GhM_D06G1085.1,GhM_A07G0499.1,GhM_D07G0493.1,GhM_A13G2554.1,GhM_A08G3144.1,GhM_D08G3069.1,GhM_D13G2467.1,GhM_D07G0492.1,GhM_A12G3226.1,GhM_D12G3112.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G61110 | ARS27A; ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0005618|cell wall;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A07G1027.1,GhM_A07G2156.1,GhM_A08G0652.1,GhM_A13G2328.1,GhM_A08G2701.1,GhM_D07G1015.1,GhM_A11G3339.1,GhM_D07G2095.1,GhM_D08G0622.1,GhM_D08G2641.1,GhM_D13G2216.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT2G28290 | SYD, CHR3; SYD (SPLAYED); ATPase/ chromatin binding | GO:0010199|organ boundary specification between lateral organs and the meristem;GO:0040029|regulation of gene expression, epigenetic;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0009908|flower development;GO:0003682|chromatin binding;GO:0005829|cytosol;GO:0016887|ATPase activity;GO:0043044|ATP-dependent chromatin remodeling;GO:0016585|chromatin remodeling complex | GhM_A07G2368.1,GhM_D11G0515.1,GhM_A12G1321.1,GhM_D11G2337.1,GhM_A09G2841.1,GhM_D09G2715.1,GhM_A10G1191.1,GhM_D10G1939.1,GhM_Scaf083G234.1,GhM_Scaf083G235.1,GhM_Scaf083G236.1 | 11 | 0 | Gossypium | Cotton | |||
| - | AT3G63240||AT2G32010 | endonuclease/exonuclease/phosphatase family protein | GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0010305|leaf vascular tissue pattern formation;GO:0005575|cellular_component | GhM_A08G0822.1,GhM_D08G0784.1,GhM_A12G0038.1,GhM_D12G0038.1,GhM_D08G2380.1,GhM_A08G2432.1,GhM_D11G1455.1,GhM_D10G1683.1,GhM_A09G2678.1,GhM_D09G2556.1,GhM_A10G1436.1 | 11 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D03G0450.1,GhM_D08G1004.1,GhM_D03G0665.1,GhM_D10G2845.1,GhM_D03G0906.1,GhM_D11G2613.1,GhM_D04G0545.1,GhM_D05G3672.1,GhM_D06G0877.1,GhM_D07G1996.1,GhM_D09G1371.1 | 11 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D03G1178.1,GhM_D10G2350.1,GhM_D03G1494.1,GhM_D07G0808.1,GhM_D04G0654.1,GhM_D12G0381.1,GhM_D05G3705.1,GhM_D10G2145.1,GhM_D08G1241.1,GhM_D11G1879.1,GhM_D11G1179.1 | 11 | 0 | Gossypium | Cotton | |||
| TA1041:GhM_A05G3360.1,GhM_A05G3367.1,GhM_A05G3368.1 | AT4G08350||AT2G34210 | GTA02, GTA2; GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2); structural constituent of ribosome / transcription elongation regulator/ transcription factor||structural constituent of ribosome / transcription elongation regulator/ transcription initiation factor | GO:0006357|regulation of transcription from RNA polymerase II promoter;GO:0032968|positive regulation of RNA elongation from RNA polymerase II promoter;GO:0005840|ribosome;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016986|transcription initiation factor activity;GO:0003711|transcription elongation regulator activity | GhM_A02G0781.1,GhM_A05G2710.1,GhM_A05G3034.1,GhM_D02G0773.1,GhM_D05G3033.1,GhM_D05G2710.1,GhM_A05G2711.1,GhM_D05G2711.1 | 11 | 1 | Gossypium | Cotton | |||
| TA1342:GhM_A11G4015.1,GhM_A11G4018.1 | AT3G52750||AT2G36250 | FTSZ2-2; FTSZ2-2; GTP binding / GTPase/ structural molecule||FTSZ2-1, ATFTSZ2-1; FTSZ2-1; protein binding / structural molecule | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003924|GTPase activity;GO:0005525|GTP binding;GO:0009570|chloroplast stroma;GO:0051258|protein polymerization;GO:0005198|structural molecule activity;GO:0016020|membrane;GO:0010020|chloroplast fission | GhM_A01G2570.1,GhM_A09G1752.1,GhM_D11G3906.1,GhM_D01G2503.1,GhM_A07G2375.1,GhM_D09G1650.1,GhM_D08G0093.1,GhM_D05G1155.1,GhM_D03G0846.1 | 11 | 1 | Gossypium | Cotton | |||
| TA2031:GhM_D06G0962.1,GhM_D06G0967.1 | AT3G43190||AT4G02280 | SUS4, ATSUS4; SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups||SUS3, ATSUS3; SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0005985|sucrose metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0009058|biosynthetic process;GO:0016157|sucrose synthase activity;GO:0005886|plasma membrane;GO:0005986|sucrose biosynthetic process;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G0390.1,GhM_A06G0960.1,GhM_A07G0201.1,GhM_A13G2507.1,GhM_D05G0409.1,GhM_D13G2410.1,GhM_D07G0201.1,GhM_A08G1610.1,GhM_D08G1562.1 | 11 | 1 | Gossypium | Cotton | |||
| TA2035:GhM_D06G1045.1,GhM_D06G1048.1 | AT1G54270||AT3G13920 | EIF4A1, RH4, TIF4A1; EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor||EIF4A-2; EIF4A-2; ATP-dependent helicase/ translation initiation factor | GO:0005515|protein binding;GO:0003743|translation initiation factor activity;GO:0046686|response to cadmium ion;GO:0005730|nucleolus;GO:0005829|cytosol;GO:0008026|ATP-dependent helicase activity;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0006413|translational initiation | GhM_A05G0443.1,GhM_A05G1523.1,GhM_A06G1042.1,GhM_A09G1085.1,GhM_A10G0642.1,GhM_D05G0465.1,GhM_D05G1539.1,GhM_D10G0611.1,GhM_D09G1021.1 | 11 | 1 | Gossypium | Cotton | |||
| TA2953:GhM_A03G0004.1,GhM_A03G0008.1 | ATCG00280 | PSBC; chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0016020|membrane | GhM_D02G0928.1,GhM_Scaf232G357.1,GhM_A01G1694.1,GhM_A01G2020.1,GhM_Scaf005G082.1,GhM_Scaf232G358.1,GhM_D10G2245.1,GhM_D13G0181.1,GhM_A06G1348.1 | 11 | 1 | Gossypium | Cotton | |||
| TA3005:GhM_A03G1472.1,GhM_A03G1476.1 | AT2G37790||AT5G01670 | aldo/keto reductase family protein||aldose reductase, putative | GO:0005634|nucleus;GO:0055114|oxidation reduction;GO:0005829|cytosol;GO:0016491|oxidoreductase activity | GhM_A01G0718.1,GhM_A12G2017.1,GhM_D12G1926.1,GhM_D02G1592.1,GhM_A11G3061.1,GhM_D08G0834.1,GhM_D03G0768.1,GhM_D02G1307.1,GhM_A04G1788.1 | 11 | 1 | Gossypium | Cotton | |||
| TA32:GhM_A13G0118.1,GhM_A13G0119.1,GhM_A13G0120.1,GhM_A13G0121.1,GhM_A13G0122.1,GhM_A13G0123.1,GhM_A13G0124.1,GhM_A13G0126.1,GhM_A13G0127.1,GhM_A13G0128.1,GhM_A13G0129.1 | AT2G28270 | DC1 domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 11 | 1 | Gossypium | Cotton | |||
| TA3399:GhM_A07G2453.1,GhM_A07G2455.1 | AT3G07810 | heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding | GhM_A07G2141.1,GhM_D07G1036.1,GhM_A11G1767.1,GhM_D07G2032.1,GhM_A07G1053.1,GhM_D07G2356.1,GhM_D11G1752.1,GhM_A08G0642.1,GhM_D08G0611.1 | 11 | 1 | Gossypium | Cotton | |||
| TA3430:GhM_A08G0431.1,GhM_A08G0432.1 | AT3G61600 | ATPOB1; ATPOB1; protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_D08G0418.1,GhM_A12G1455.1,GhM_D12G1393.1,GhM_A11G1086.1,GhM_D11G1099.1,GhM_D12G2783.1,GhM_A12G2893.1,GhM_D11G0258.1,GhM_A11G0263.1 | 11 | 1 | Gossypium | Cotton | |||
| TA416:GhM_D08G2068.1,GhM_D08G2069.1,GhM_D08G2070.1,GhM_D08G2071.1 | - | - | - | GhM_A08G2115.1,GhM_D01G1782.1,GhM_D06G1260.1,GhM_D08G1663.1,GhM_D10G1720.1,GhM_D12G1310.1,GhM_D08G0853.1 | 11 | 1 | Gossypium | Cotton | |||
| TA632:GhM_A13G2030.1,GhM_A13G2033.1,GhM_A13G2034.1 | AT1G78610||AT3G14810 | MSL6; MSL6 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6)||MSL5; MSL5 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 5) | GO:0005886|plasma membrane;GO:0016020|membrane | GhM_D13G1923.1,GhM_A01G0491.1,GhM_A04G0469.1,GhM_D05G3897.1,GhM_D01G0477.1,GhM_A13G2031.1,GhM_A13G2032.1,GhM_D10G2881.1 | 11 | 1 | Gossypium | Cotton | |||
| TA1168:GhM_A10G1336.1,GhM_A10G1337.1;TA2488:GhM_D10G1778.1,GhM_D10G1779.1 | AT4G14420||AT1G04340||AT5G43460 | lesion inducing protein-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A02G0415.1,GhM_A09G0828.1,GhM_D09G0770.1,GhM_A01G0273.1,GhM_D01G0239.1,GhM_D10G1767.1,GhM_D13G0625.1 | 11 | 2 | Gossypium | Cotton | |||
| TA117:GhM_D07G2385.1,GhM_D07G2386.1,GhM_D07G2387.1,GhM_D07G2388.1,GhM_D07G2389.1,GhM_D07G2390.1,GhM_D07G2391.1;TA512:GhM_A07G2484.1,GhM_A07G2486.1,GhM_A07G2488.1,GhM_A07G2490.1 | AT5G05260||AT4G39950||AT5G35917 | CYP79A3P; CYP79A3P; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP79A2; CYP79A2 (CYTOCHROME P450 79A2); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen / oxygen binding||CYP79B2; CYP79B2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0010120|camalexin biosynthetic process;GO:0019761|glucosinolate biosynthetic process;GO:0016709|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen;GO:0020037|heme binding;GO:0052544|callose deposition in cell wall during defense response;GO:0009617|response to bacterium;GO:0006569|tryptophan catabolic process;GO:0006952|defense response;GO:0005506|iron ion binding;GO:0002229|defense response to oomycetes;GO:0009684|indoleacetic acid biosynthetic process;GO:0019825|oxygen binding;GO:0042742|defense response to bacterium;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 11 | 2 | Gossypium | Cotton | |||
| TA1229:GhM_A11G0215.1,GhM_A11G0220.1;TA2543:GhM_D11G0210.1,GhM_D11G0214.1 | AT5G28540||AT1G56410||AT5G42020 | BIP1; BIP1; ATP binding||ERD2, HSP70T-1; ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2); ATP binding||BIP, BIP2; BIP2; ATP binding | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0005783|endoplasmic reticulum;GO:0009408|response to heat;GO:0005788|endoplasmic reticulum lumen;GO:0006457|protein folding;GO:0030433|ER-associated protein catabolic process;GO:0005730|nucleolus;GO:0016020|membrane;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0010197|polar nucleus fusion;GO:0005524|ATP binding;GO:0005773|vacuole | GhM_A02G1165.1,GhM_A03G0180.1,GhM_A08G1431.1,GhM_A13G1489.1,GhM_D03G1059.1,GhM_D08G1417.1,GhM_D13G1373.1 | 11 | 2 | Gossypium | Cotton | |||
| TA1242:GhM_A11G0962.1,GhM_A11G0964.1;TA2571:GhM_D11G0977.1,GhM_D11G0978.1 | AT2G45650||AT2G45660 | AGL6; AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor||AGL20, SOC1; AGL20 (AGAMOUS-LIKE 20); transcription factor | GO:0005634|nucleus;GO:0048437|floral organ development;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010228|vegetative to reproductive phase transition of meristem | GhM_A07G1774.1,GhM_A08G1749.1,GhM_D07G1736.1,GhM_D08G1704.1,GhM_D02G2335.1,GhM_D12G1304.1,GhM_A12G1365.1 | 11 | 2 | Gossypium | Cotton | |||
| TA1275:GhM_A11G2208.1,GhM_A11G2211.1;TA2607:GhM_D11G2186.1,GhM_D11G2187.1 | AT2G23630||AT5G66920 | sks16; sks16 (SKU5 Similar 16); copper ion binding / pectinesterase||sks17; sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0016491|oxidoreductase activity | GhM_A12G0805.1,GhM_D12G0784.1,GhM_A10G1063.1,GhM_A11G0557.1,GhM_D10G1025.1,GhM_D11G0548.1,GhM_D11G0549.1 | 11 | 2 | Gossypium | Cotton | |||
| TA145:GhM_D04G0322.1,GhM_D04G0323.1,GhM_D04G0327.1,GhM_D04G0328.1,GhM_D04G0330.1,GhM_D04G0335.1;TA295:GhM_A05G4612.1,GhM_A05G4614.1,GhM_A05G4615.1,GhM_A05G4619.1,GhM_A05G4620.1 | AT5G24080||AT2G19130||AT1G34300||AT5G60900 | S-locus lectin protein kinase family protein||protein kinase family protein||RLK1; RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 11 | 2 | Gossypium | Cotton | |||
| TA155:GhM_A01G0506.1,GhM_A01G0509.1,GhM_A01G0510.1,GhM_A01G0511.1,GhM_A01G0512.1,GhM_A01G0515.1;TA220:GhM_D01G0489.1,GhM_D01G0490.1,GhM_D01G0491.1,GhM_D01G0492.1,GhM_D01G0493.1 | - | - | - | - | 11 | 2 | Gossypium | Cotton | |||
| TA156:GhM_A01G2770.1,GhM_A01G2771.1,GhM_A01G2772.1,GhM_A01G2775.1,GhM_A01G2776.1,GhM_A01G2777.1;TA358:GhM_D01G2697.1,GhM_D01G2698.1,GhM_D01G2700.1,GhM_D01G2701.1 | AT3G09110||AT5G01150||AT5G01140||AT5G01130||AT3G09120 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D01G2699.1 | 11 | 2 | Gossypium | Cotton | |||
| TA161:GhM_D11G1754.1,GhM_D11G1755.1,GhM_D11G1758.1,GhM_D11G1759.1,GhM_D11G1760.1,GhM_D11G1761.1;TA203:GhM_A11G1769.1,GhM_A11G1770.1,GhM_A11G1773.1,GhM_A11G1774.1,GhM_A11G1775.1 | AT3G07870||AT4G12560 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0031348|negative regulation of defense response;GO:0005575|cellular_component | - | 11 | 2 | Gossypium | Cotton | |||
| TA164:GhM_D12G3058.1,GhM_D12G3059.1,GhM_D12G3060.1,GhM_D12G3061.1,GhM_D12G3062.1,GhM_D12G3063.1;TA214:GhM_A12G3174.1,GhM_A12G3175.1,GhM_A12G3176.1,GhM_A12G3177.1,GhM_A12G3178.1 | AT5G44440||AT5G44410||AT5G44360||AT1G30700||AT4G20820||AT5G44380||AT1G30760 | FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003824|catalytic activity;GO:0016491|oxidoreductase activity;GO:0005618|cell wall;GO:0050660|FAD binding;GO:0009055|electron carrier activity | - | 11 | 2 | Gossypium | Cotton | |||
| TA174:GhM_A04G0145.1,GhM_A04G0146.1,GhM_A04G0152.1,GhM_A04G0154.1,GhM_A04G0156.1,GhM_A04G0157.1;TA392:GhM_D05G4245.1,GhM_D05G4249.1,GhM_D05G4252.1,GhM_D05G4254.1 | AT1G20970 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: guard cell, cultured cell; BEST Arabidopsis thaliana protein match is: PPI1 (PROTON PUMP INTERACTOR 1); protein binding (TAIR:AT4G27500.1); Has 53409 Blast hits to 33585 proteins in 1572 species: Archae - 464; Bacteria - 7066; Metazoa - 25076; Fungi - 5173; Plants - 1740; Viruses - 257; Other Eukaryotes - 13633 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_D05G4250.1 | 11 | 2 | Gossypium | Cotton | |||
| TA198:GhM_A10G2389.1,GhM_A10G2402.1,GhM_A10G2403.1,GhM_A10G2405.1,GhM_A10G2406.1;TA265:GhM_D10G2318.1,GhM_D10G2319.1,GhM_D10G2320.1,GhM_D10G2321.1,GhM_D10G2322.1 | AT2G45180||AT4G12500||AT4G12480||AT1G12100 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein||lipid binding||pEARLI 1; pEARLI 1; lipid binding | GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0008289|lipid binding;GO:0050832|defense response to fungus;GO:0009535|chloroplast thylakoid membrane | GhM_D10G2334.1 | 11 | 2 | Gossypium | Cotton | |||
| TA201:GhM_A11G0660.1,GhM_A11G0662.1,GhM_A11G0663.1,GhM_A11G0664.1,GhM_A11G0665.1;TA268:GhM_D11G0670.1,GhM_D11G0671.1,GhM_D11G0672.1,GhM_D11G0673.1,GhM_D11G0674.1 | AT3G51520 | diacylglycerol acyltransferase family | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0004144|diacylglycerol O-acyltransferase activity | GhM_D07G0845.1 | 11 | 2 | Gossypium | Cotton | |||
| TA2026:GhM_D06G0555.1,GhM_D06G0559.1;TA3280:GhM_A06G0546.1,GhM_A06G0550.1 | AT1G44110||AT5G11300||AT1G80370 | CYC3B, CYC2BAT, CYCA2;2; CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS); cyclin-dependent protein kinase regulator||CYCA2;4; CYCA2;4 (Cyclin A2;4); cyclin-dependent protein kinase regulator||CYCA1;1; CYCA1;1 (Cyclin A1;1); cyclin-dependent protein kinase regulator | GO:0051726|regulation of cell cycle;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0010583|response to cyclopentenone;GO:0005737|cytoplasm;GO:0016538|cyclin-dependent protein kinase regulator activity | GhM_A04G0334.1,GhM_A04G0753.1,GhM_A05G0116.1,GhM_D05G0120.1,GhM_A13G2008.1,GhM_A09G1401.1,GhM_A11G3137.1 | 11 | 2 | Gossypium | Cotton | |||
| TA212:GhM_A12G1308.1,GhM_A12G1309.1,GhM_A12G1310.1,GhM_A12G1311.1,GhM_A12G1312.1;TA280:GhM_D12G1246.1,GhM_D12G1247.1,GhM_D12G1248.1,GhM_D12G1249.1,GhM_D12G1250.1 | AT5G51160||AT5G50140||AT4G11000||AT1G34050 | ankyrin repeat family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_D11G0888.1 | 11 | 2 | Gossypium | Cotton | |||
| TA2299:GhM_D08G0506.1,GhM_D08G0508.1;TA3434:GhM_A08G0538.1,GhM_A08G0541.1 | AT4G02260 | RSH1, AT-RSH1; RSH1 (RELA-SPOT HOMOLOG 1); catalytic | GO:0009507|chloroplast;GO:0009611|response to wounding;GO:0003824|catalytic activity | GhM_A08G0531.1,GhM_A08G0539.1,GhM_D12G1593.1,GhM_D11G3043.1,GhM_D12G1620.1,GhM_A12G1674.1,GhM_A08G0542.1 | 11 | 2 | Gossypium | Cotton | |||
| TA2359:GhM_D08G3045.1,GhM_D08G3046.1;TA3498:GhM_A08G3114.1,GhM_A08G3118.1 | AT5G11590 | TINY2; TINY2 (TINY2); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A06G1121.1,GhM_D07G0093.1,GhM_D06G1136.1,GhM_A06G0780.1,GhM_D06G0781.1,GhM_D08G3126.1,GhM_A08G3195.1 | 11 | 2 | Gossypium | Cotton | |||
| TA238:GhM_D05G4147.1,GhM_D05G4149.1,GhM_D05G4151.1,GhM_D05G4152.1,GhM_D05G4153.1;TA483:GhM_A04G0236.1,GhM_A04G0237.1,GhM_A04G0239.1,GhM_A04G0240.1 | AT1G65790||AT4G21390||AT4G27290||AT4G21380||AT3G12000 | ARK1; ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase||B120; B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding||ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||ARK3; ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase||S-locus related protein SLR1, putative (S1) | GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0005634|nucleus;GO:0048544|recognition of pollen;GO:0006468|protein amino acid phosphorylation;GO:0005773|vacuole;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0019199|transmembrane receptor protein kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A04G0235.1,GhM_A11G1308.1 | 11 | 2 | Gossypium | Cotton | |||
| TA267:GhM_D10G2437.1,GhM_D10G2439.1,GhM_D10G2440.1,GhM_D10G2441.1,GhM_D10G2443.1;TA558:GhM_A10G2525.1,GhM_A10G2528.1,GhM_A10G2529.1 | AT4G35160||AT1G51990 | O-methyltransferase family 2 protein | GO:0008168|methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0005829|cytosol;GO:0046983|protein dimerization activity | GhM_A10G1177.1,GhM_A10G2526.1,GhM_D10G1957.1 | 11 | 2 | Gossypium | Cotton | |||
| TA279:GhM_D12G0765.1,GhM_D12G0766.1,GhM_D12G0768.1,GhM_D12G0769.1,GhM_D12G0770.1;TA339:GhM_A12G0781.1,GhM_A12G0783.1,GhM_A12G0784.1,GhM_A12G0786.1 | AT1G49475||AT3G18990||AT1G49480 | RTV1; RTV1 (related to vernalization1 1); DNA binding / transcription factor||VRN1, REM39; VRN1 (REDUCED VERNALIZATION RESPONSE 1); transcription repressor||DNA binding / transcription factor | GO:0010048|vernalization response;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016564|transcription repressor activity;GO:0005575|cellular_component;GO:0005654|nucleoplasm | GhM_D12G0767.1,GhM_D13G2631.1 | 11 | 2 | Gossypium | Cotton | |||
| TA285:GhM_D13G2887.1,GhM_D13G2888.1,GhM_D13G2889.1,GhM_D13G2890.1,GhM_D13G2891.1;TA1779:GhM_D03G1725.1,GhM_D03G1726.1 | AT2G30110||AT5G06460 | ATUBA1, MOS5; ATUBA1; ubiquitin activating enzyme/ ubiquitin-protein ligase||ATUBA2, UBA 2; ATUBA2; ubiquitin activating enzyme/ ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0004839|ubiquitin activating enzyme activity;GO:0004842|ubiquitin-protein ligase activity;GO:0005886|plasma membrane;GO:0016567|protein ubiquitination;GO:0051707|response to other organism | GhM_A03G0399.1,GhM_A08G2622.1,GhM_A13G2983.1,GhM_D08G2564.1 | 11 | 2 | Gossypium | Cotton | |||
| TA312:GhM_A09G2765.1,GhM_A09G2766.1,GhM_A09G2767.1,GhM_A09G2768.1,GhM_A09G2769.1;TA433:GhM_D09G2638.1,GhM_D09G2639.1,GhM_D09G2640.1,GhM_D09G2642.1 | AT1G04370||AT3G23220 | ATERF14; ATERF14 (Ethylene-responsive element binding factor 14); DNA binding / transcription factor||DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_D02G0428.1,GhM_A02G0429.1 | 11 | 2 | Gossypium | Cotton | |||
| TA387:GhM_D05G0977.1,GhM_D05G0981.1,GhM_D05G0982.1,GhM_D05G0984.1;TA495:GhM_A05G0963.1,GhM_A05G0965.1,GhM_A05G0966.1,GhM_A05G0968.1 | AT3G08510||AT5G58700||AT5G58690 | ATPLC5, PLC5; phosphoinositide-specific phospholipase C family protein||ATPLC4, PLC4; phosphoinositide-specific phospholipase C family protein||ATPLC2; ATPLC2 (PHOSPHOLIPASE C 2); phospholipase C | GO:0005509|calcium ion binding;GO:0004629|phospholipase C activity;GO:0004435|phosphoinositide phospholipase C activity;GO:0006629|lipid metabolic process;GO:0008081|phosphoric diester hydrolase activity;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_D09G1134.1,GhM_A09G1202.1,GhM_D01G0646.1 | 11 | 2 | Gossypium | Cotton | |||
| TA403:GhM_A01G2218.1,GhM_A01G2221.1,GhM_A01G2224.1,GhM_A01G2227.1;TA3199:GhM_A05G3230.1,GhM_A05G3231.1 | ATCG00670 | CLPP1, PCLPP; Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001). | GO:0009570|chloroplast stroma;GO:0009507|chloroplast;GO:0009532|plastid stroma | GhM_Scaf003G063.1,GhM_D09G0708.1,GhM_D09G1169.1,GhM_A10G1676.1,GhM_D02G1353.1 | 11 | 2 | Gossypium | Cotton | |||
| TA431:GhM_D09G1106.1,GhM_D09G1111.1,GhM_D09G1112.1,GhM_D09G1113.1;TA530:GhM_A09G1173.1,GhM_A09G1178.1,GhM_A09G1179.1,GhM_A09G1181.1 | AT1G08170||AT1G07790||AT5G59910||AT3G53650||AT2G28720 | HTB4; HTB4; DNA binding||histone H2B, putative||HTB1; HTB1; DNA binding||histone H2B family protein | GO:0009507|chloroplast;GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0000786|nucleosome | GhM_A05G0947.1,GhM_D05G0961.1,GhM_D13G1186.1 | 11 | 2 | Gossypium | Cotton | |||
| TA437:GhM_D10G0644.1,GhM_D10G0645.1,GhM_D10G0646.1,GhM_D10G0647.1;TA1148:GhM_A10G0675.1,GhM_A10G0676.1 | AT3G21250 | ATMRP6, MRP6; ATMRP6; ATPase, coupled to transmembrane movement of substances | GO:0000325|plant-type vacuole;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | GhM_D01G1940.1,GhM_D01G1941.1,GhM_D05G3684.1,GhM_D05G3685.1,GhM_D05G3686.1 | 11 | 2 | Gossypium | Cotton | |||
| TA577:GhM_A11G1668.1,GhM_A11G1669.1,GhM_A11G1670.1;TA3406:GhM_A07G2550.1,GhM_A07G2551.1 | AT3G07390||AT4G12980||AT3G25290 | auxin-responsive protein, putative||AIR12; AIR12; extracellular matrix structural constituent||auxin-responsive family protein | GO:0007275|multicellular organismal development;GO:0009733|response to auxin stimulus;GO:0046658|anchored to plasma membrane;GO:0030198|extracellular matrix organization;GO:0010102|lateral root morphogenesis;GO:0005201|extracellular matrix structural constituent;GO:0005576|extracellular region;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_D07G1783.1,GhM_D11G1654.1,GhM_A07G1098.1,GhM_D07G2451.1,GhM_D07G1080.1,GhM_D11G1657.1 | 11 | 2 | Gossypium | Cotton | |||
| TA62:GhM_A02G0416.1,GhM_A02G0417.1,GhM_A02G0418.1,GhM_A02G0419.1,GhM_A02G0420.1,GhM_A02G0421.1,GhM_A02G0422.1,GhM_A02G0423.1,GhM_A02G0425.1;TA1653:GhM_D02G0423.1,GhM_D02G0424.1 | AT1G06620 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0010302|2-oxoglutarate-dependent dioxygenase activity | - | 11 | 2 | Gossypium | Cotton | |||
| TA67:GhM_A10G0610.1,GhM_A10G0611.1,GhM_A10G0612.1,GhM_A10G0613.1,GhM_A10G0614.1,GhM_A10G0615.1,GhM_A10G0616.1,GhM_A10G0618.1;TA855:GhM_D10G0586.1,GhM_D10G0587.1,GhM_D10G0589.1 | - | - | - | - | 11 | 2 | Gossypium | Cotton | |||
| TA829:GhM_D08G2476.1,GhM_D08G2477.1,GhM_D08G2478.1;TA1101:GhM_A08G2542.1,GhM_A08G2544.1,GhM_A08G2545.1 | AT3G09640||AT1G07890 | APX2, APX1B; APX2 (ASCORBATE PEROXIDASE 2); L-ascorbate peroxidase||APX1, CS1; APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0009793|embryonic development ending in seed dormancy;GO:0016688|L-ascorbate peroxidase activity;GO:0005737|cytoplasm;GO:0000302|response to reactive oxygen species;GO:0009570|chloroplast stroma;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0005618|cell wall;GO:0005886|plasma membrane | GhM_A05G1106.1,GhM_D05G1123.1,GhM_A13G2939.1,GhM_D04G1458.1,GhM_D13G2841.1 | 11 | 2 | Gossypium | Cotton | |||
| TA1938:GhM_D05G2582.1,GhM_D05G2583.1;TA3179:GhM_A05G2569.1,GhM_A05G2570.1;TA2021:GhM_D06G0460.1,GhM_D06G0462.1 | AT1G78000||AT1G77990||AT1G22150 | SULTR1;3; SULTR1;3; sulfate transmembrane transporter||AST56, SULTR2;2; AST56; sulfate transmembrane transporter||SULTR1;2, SEL1; SULTR1;2 (SULFATE TRANSPORTER 1;2); sulfate transmembrane transporter | GO:0006810|transport;GO:0008272|sulfate transport;GO:0015116|sulfate transmembrane transporter activity;GO:0009970|cellular response to sulfate starvation;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A03G2282.1,GhM_A06G0437.1,GhM_A13G0783.1,GhM_D02G2307.1,GhM_D13G0603.1 | 11 | 3 | Gossypium | Cotton | |||
| TA250:GhM_D07G2249.1,GhM_D07G2254.1,GhM_D07G2262.1,GhM_D07G2263.1,GhM_D07G2264.1;TA3395:GhM_A07G2316.1,GhM_A07G2319.1;TA2854:GhM_D13G2537.1,GhM_D13G2539.1 | AT3G51550||AT5G38990 | FER; FER (FERONIA); kinase/ protein kinase||protein kinase family protein | GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0006468|protein amino acid phosphorylation;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0043680|filiform apparatus | GhM_A13G2634.1,GhM_D13G2538.1 | 11 | 3 | Gossypium | Cotton | |||
| TA447:GhM_D11G2794.1,GhM_D11G2795.1,GhM_D11G2796.1,GhM_D11G2797.1;TA580:GhM_A11G2836.1,GhM_A11G2837.1,GhM_A11G2840.1;TA2618:GhM_D11G2826.1,GhM_D11G2827.1 | AT5G07010 | ATST2A, ST2A; ST2A (SULFOTRANSFERASE 2A); hydroxyjasmonate sulfotransferase/ sulfotransferase | GO:0008146|sulfotransferase activity;GO:0009753|response to jasmonic acid stimulus;GO:0009694|jasmonic acid metabolic process;GO:0005575|cellular_component | GhM_A11G2914.1,GhM_D04G1382.1 | 11 | 3 | Gossypium | Cotton | |||
| TA730:GhM_D05G2501.1,GhM_D05G2502.1,GhM_D05G2503.1;TA1026:GhM_A05G2488.1,GhM_A05G2489.1,GhM_A05G2490.1;TA1595:GhM_D01G1428.1,GhM_D01G1429.1 | AT1G28230||AT1G28220 | PUP1, ATPUP1; PUP1 (PURINE PERMEASE 1); purine nucleoside transmembrane transporter/ purine transmembrane transporter||ATPUP3; ATPUP3; purine transmembrane transporter | GO:0010184|cytokinin transport;GO:0005887|integral to plasma membrane;GO:0015211|purine nucleoside transmembrane transporter activity;GO:0016020|membrane;GO:0006863|purine transport;GO:0005345|purine transmembrane transporter activity | GhM_A01G1465.1,GhM_A02G2237.1,GhM_D03G0033.1 | 11 | 3 | Gossypium | Cotton | |||
| TA1362:GhM_A12G0459.1,GhM_A12G0460.1;TA3034:GhM_A03G2579.1,GhM_A03G2580.1;TA1714:GhM_D02G2605.1,GhM_D02G2606.1;TA2686:GhM_D12G0335.1,GhM_D12G0336.1 | AT1G62020 | coatomer protein complex, subunit alpha, putative | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0030126|COPI vesicle coat;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0016020|membrane;GO:0005215|transporter activity;GO:0006888|ER to Golgi vesicle-mediated transport | GhM_A04G1613.1,GhM_D04G2093.1,GhM_D11G3572.1 | 11 | 4 | Gossypium | Cotton | |||
| TA1582:GhM_D01G0775.1,GhM_D01G0776.1;TA2130:GhM_A01G0810.1,GhM_A01G0811.1;TA1840:GhM_D04G1855.1,GhM_D04G1857.1;TA3090:GhM_A04G1371.1,GhM_A04G1372.1 | AT1G09560||AT3G62020 | GLP5; GLP5 (GERMIN-LIKE PROTEIN 5); manganese ion binding / nutrient reservoir||GLP10; GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0005634|nucleus;GO:0030145|manganese ion binding;GO:0045735|nutrient reservoir activity;GO:0005618|cell wall;GO:0009409|response to cold | GhM_A01G0829.1,GhM_D01G0792.1,GhM_D06G2428.1 | 11 | 4 | Gossypium | Cotton | |||
| TA419:GhM_D08G2412.1,GhM_D08G2413.1,GhM_D08G2414.1,GhM_D08G2415.1;TA3414:GhM_A07G2722.1,GhM_A07G2723.1;TA2278:GhM_D07G2621.1,GhM_D07G2622.1;TA1100:GhM_A08G2462.1,GhM_A08G2463.1,GhM_A08G2466.1 | AT2G31240||AT5G24530||AT4G10500 | tetratricopeptide repeat (TPR)-containing protein||oxidoreductase, 2OG-Fe(II) oxygenase family protein||DMR6; DMR6 (DOWNY MILDEW RESISTANT 6); oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | GO:0008150|biological_process;GO:0009620|response to fungus;GO:0005488|binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009617|response to bacterium;GO:0009813|flavonoid biosynthetic process;GO:0019748|secondary metabolic process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | - | 11 | 4 | Gossypium | Cotton | |||
| TA487:GhM_A04G0533.1,GhM_A04G0534.1,GhM_A04G0537.1,GhM_A04G0538.1;TA739:GhM_D05G3847.1,GhM_D05G3849.1,GhM_D05G3850.1;TA1513:GhM_A13G2047.1,GhM_A13G2050.1;TA2824:GhM_D13G1939.1,GhM_D13G1941.1 | AT1G78380||AT1G17180||AT1G53680||AT1G78360 | ATGSTU28; ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28); glutathione transferase||ATGSTU25; ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase||ATGSTU19, GST8; ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase||ATGSTU21; ATGSTU21 (GLUTATHIONE S-TRANSFERASE TAU 21); glutathione transferase | GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0042631|cellular response to water deprivation;GO:0046686|response to cadmium ion;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm;GO:0009570|chloroplast stroma;GO:0043295|glutathione binding;GO:0005886|plasma membrane | - | 11 | 4 | Gossypium | Cotton | |||
| TA663:GhM_D01G2722.1,GhM_D01G2723.1,GhM_D01G2724.1;TA798:GhM_A01G2798.1,GhM_A01G2799.1,GhM_A01G2800.1;TA799:GhM_A01G2821.1,GhM_A01G2822.1,GhM_A01G2823.1;TA1628:GhM_D01G2744.1,GhM_D01G2746.1 | AT4G13810||AT1G45616||AT2G33080||AT1G47890||AT3G11080 | AtRLP47; AtRLP47 (Receptor Like Protein 47); protein binding||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding||AtRLP7; AtRLP7 (Receptor Like Protein 7); kinase/ protein binding||AtRLP28; AtRLP28 (Receptor Like Protein 28); protein binding||AtRLP35; AtRLP35 (Receptor Like Protein 35); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0016020|membrane | - | 11 | 4 | Gossypium | Cotton | |||
| TA716:GhM_D05G0047.1,GhM_D05G0048.1,GhM_D05G0049.1;TA1012:GhM_A05G0047.1,GhM_A05G0049.1,GhM_A05G0050.1;TA3196:GhM_A05G3142.1,GhM_A05G3143.1;TA1956:GhM_D05G3144.1,GhM_D05G3145.1 | AT5G24080||AT4G32300 | protein kinase family protein||SD2-5; SD2-5 (S-DOMAIN-2 5); carbohydrate binding / kinase/ protein kinase | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0048.1 | 11 | 4 | Gossypium | Cotton | |||
| - | ATCG00860 | YCF2.1; Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally. | GO:0017111|nucleoside-triphosphatase activity;GO:0000166|nucleotide binding;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A01G0003.1,GhM_Scaf003G069.1,GhM_A04G0038.1,GhM_D02G1383.1,GhM_A06G1187.1,GhM_D05G1246.1,GhM_D03G0588.1,GhM_D11G2755.1,GhM_A05G3630.1,GhM_Scaf019G131.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G20362 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G0012.1,GhM_A05G3626.1,GhM_A04G0740.1,GhM_A06G1343.1,GhM_A12G1216.1,GhM_A06G1511.1,GhM_Scaf001G052.1,GhM_D10G0133.1,GhM_Scaf003G070.1,GhM_Scaf259G372.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G43980 | 40S ribosomal protein S29 (RPS29A) | GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A01G0120.1,GhM_D01G0100.1,GhM_A03G2422.1,GhM_A04G1548.1,GhM_D04G2028.1,GhM_A12G0217.1,GhM_D12G0223.1,GhM_A13G0498.1,GhM_D13G0488.1,GhM_D02G2442.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G38130||AT5G63110||AT3G44680 | HD1, HDA19, ATHD1, HDA1, RPD3A; HD1 (HISTONE DEACETYLASE 1); basal transcription repressor/ histone deacetylase/ protein binding||HDA9, HDA09; HDA9 (HISTONE DEACETYLASE 9); histone deacetylase||HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1; HDA6 (HISTONE DEACETYLASE 6); histone deacetylase | GO:0016575|histone deacetylation;GO:0005515|protein binding;GO:0009941|chloroplast envelope;GO:0004407|histone deacetylase activity;GO:0007275|multicellular organismal development;GO:0005634|nucleus;GO:0009861|jasmonic acid and ethylene-dependent systemic resistance;GO:0016573|histone acetylation;GO:0009294|DNA mediated transformation;GO:0016441|posttranscriptional gene silencing;GO:0016481|negative regulation of transcription;GO:0016458|gene silencing;GO:0017163|basal transcription repressor activity | GhM_A01G0170.1,GhM_D01G0149.1,GhM_A03G0835.1,GhM_D03G1267.1,GhM_A03G2246.1,GhM_D02G2275.1,GhM_A12G0407.1,GhM_A09G1249.1,GhM_D09G1177.1,GhM_A12G2047.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G26580 | YAB5; YAB5 (YABBY5); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A01G0556.1,GhM_D01G0525.1,GhM_A04G0438.1,GhM_D05G3933.1,GhM_A07G0461.1,GhM_A05G0165.1,GhM_D05G0174.1,GhM_A06G0646.1,GhM_D06G0641.1,GhM_D07G0458.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G15020||AT1G53240 | malate dehydrogenase (NAD), mitochondrial, putative||malate dehydrogenase (NAD), mitochondrial | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005618|cell wall;GO:0018119|peptidyl-cysteine S-nitrosylation;GO:0016615|malate dehydrogenase activity;GO:0016020|membrane;GO:0042742|defense response to bacterium;GO:0009409|response to cold | GhM_A01G0601.1,GhM_D01G0564.1,GhM_A04G0395.1,GhM_D05G3980.1,GhM_A08G0308.1,GhM_D08G0297.1,GhM_A12G2269.1,GhM_A07G2605.1,GhM_A12G3221.1,GhM_A11G2806.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G54800||AT1G61800 | GPT2; GPT2; antiporter/ glucose-6-phosphate transmembrane transporter||GPT1; GPT1; antiporter/ glucose-6-phosphate transmembrane transporter | GO:0015297|antiporter activity;GO:0009507|chloroplast;GO:0009624|response to nematode;GO:0010152|pollen maturation;GO:0007033|vacuole organization;GO:0005886|plasma membrane;GO:0015152|glucose-6-phosphate transmembrane transporter activity;GO:0009553|embryo sac development;GO:0034389|lipid particle organization;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A01G0823.1,GhM_D01G0786.1,GhM_A04G0195.1,GhM_D05G4185.1,GhM_A06G1943.1,GhM_D06G1924.1,GhM_A11G3494.1,GhM_D11G3412.1,GhM_A13G1881.1,GhM_D13G1773.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G13560 | AAPT1, ATAAPT1; AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1); phosphatidyltransferase/ phosphotransferase, for other substituted phosphate groups | GO:0012505|endomembrane system | GhM_A01G0878.1,GhM_A02G0754.1,GhM_A01G1880.1,GhM_A11G1987.1,GhM_A04G1890.1,GhM_D04G2363.1,GhM_A13G1262.1,GhM_A12G0489.1,GhM_D05G3502.1,GhM_D13G1038.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G62290||AT1G11910 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0009651|response to salt stress;GO:0005773|vacuole;GO:0006629|lipid metabolic process | GhM_A01G0882.1,GhM_D01G0844.1,GhM_A06G1985.1,GhM_D06G1965.1,GhM_A08G0325.1,GhM_D08G0308.1,GhM_A10G0132.1,GhM_A09G0693.1,GhM_A04G1319.1,GhM_D10G0119.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G55850||AT2G04410 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Defence response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: NOI (TAIR:AT5G55850.1); Has 141 Blast hits to 140 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).||NOI; NOI | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A01G0983.1,GhM_D01G0947.1,GhM_A04G0047.1,GhM_D05G4372.1,GhM_A11G1743.1,GhM_D11G1728.1,GhM_A11G3465.1,GhM_D11G3378.1,GhM_A13G1788.1,GhM_D13G1664.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G04030||AT3G07770 | ATP binding||CR88, EMB1956, HSP90.5; CR88; ATP binding | GO:0005618|cell wall;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009793|embryonic development ending in seed dormancy;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0009408|response to heat;GO:0006457|protein folding;GO:0009651|response to salt stress;GO:0010157|response to chlorate;GO:0009704|de-etiolation;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0005524|ATP binding | GhM_A01G1024.1,GhM_D09G0008.1,GhM_A03G1435.1,GhM_D02G1557.1,GhM_A13G1227.1,GhM_D13G0992.1,GhM_D06G1880.1,GhM_D11G2528.1,GhM_A07G2464.1,GhM_D07G2364.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G57250 | EXPRESSED IN: 9 plant structures; EXPRESSED DURING: F mature embryo stage, 4 leaf senescence stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951 proteins in 186 species: Archae - 6; Bacteria - 22; Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0; Other Eukaryotes - 1218 (source: NCBI BLink). | - | GhM_A01G1083.1,GhM_A07G1591.1,GhM_A04G0583.1,GhM_A01G1345.1,GhM_A07G1630.1,GhM_A08G0255.1,GhM_D08G0247.1,GhM_D06G1567.1,GhM_D13G1887.1,GhM_A08G2395.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G76270||AT1G20550 | unknown protein | GO:0008150|biological_process;GO:0005794|Golgi apparatus;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A01G1162.1,GhM_D01G1135.1,GhM_A01G2169.1,GhM_D01G2137.1,GhM_A03G2698.1,GhM_D02G2716.1,GhM_A04G1644.1,GhM_D04G2128.1,GhM_D02G1115.1,GhM_A02G1081.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G47740 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1301.1,GhM_D01G1268.1,GhM_A05G2191.1,GhM_D05G2215.1,GhM_A06G0119.1,GhM_D06G0117.1,GhM_A12G0195.1,GhM_D12G0202.1,GhM_A13G0534.1,GhM_D13G0518.1 | 10 | 0 | Gossypium | Cotton | |||
| - | ATCG00860 | YCF2.1; Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally. | GO:0017111|nucleoside-triphosphatase activity;GO:0000166|nucleotide binding;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A01G1316.1,GhM_A13G0003.1,GhM_A07G2194.1,GhM_A09G0682.1,GhM_A12G0959.1,GhM_D02G1989.1,GhM_A09G0816.1,GhM_D04G1770.1,GhM_A10G2817.1,GhM_D07G1991.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G46768||AT2G23340 | RAP2.1; RAP2.1 (related to AP2 1); DNA binding / transcription factor||AP2 domain-containing transcription factor, putative | GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0009409|response to cold | GhM_A01G1363.1,GhM_A06G0211.1,GhM_A05G2300.1,GhM_D05G2317.1,GhM_D01G1332.1,GhM_D06G0216.1,GhM_A12G0864.1,GhM_A02G2009.1,GhM_D03G0258.1,GhM_D12G1078.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G37270 | ATRPS5B; ATRPS5B (RIBOSOMAL PROTEIN 5B); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G1567.1,GhM_D01G1527.1,GhM_A04G0616.1,GhM_D13G1188.1,GhM_A05G3692.1,GhM_A01G2477.1,GhM_D05G1154.1,GhM_A09G1658.1,GhM_D01G2416.1,GhM_D04G1157.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G03730 | CTR1, SIS1; CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase/ protein binding / protein serine/threonine kinase/ protein serine/threonine/tyrosine kinase | GO:0005515|protein binding;GO:0009686|gibberellin biosynthetic process;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0005789|endoplasmic reticulum membrane;GO:0009744|response to sucrose stimulus;GO:0010182|sugar mediated signaling pathway;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0048528|post-embryonic root development;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0017145|stem cell division;GO:0009723|response to ethylene stimulus;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity | GhM_A01G1635.1,GhM_D01G1605.1,GhM_A04G0865.1,GhM_D04G1316.1,GhM_A09G1726.1,GhM_D09G1674.1,GhM_A05G3266.1,GhM_D05G3249.1,GhM_A05G3265.1,GhM_A09G1727.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G14670||AT2G01970||AT5G37310 | endomembrane protein 70, putative||LOCATED IN: integral to membrane, Golgi apparatus, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: endomembrane protein 70, putative (TAIR:AT1G14670.1); Has 1019 Blast hits to 986 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 444; Fungi - 148; Plants - 242; Viruses - 0; Other Eukaryotes - 185 (source: NCBI BLink). | GO:0009505|plant-type cell wall;GO:0006810|transport;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A01G1738.1,GhM_D01G1726.1,GhM_A05G3570.1,GhM_D05G3531.1,GhM_A07G0882.1,GhM_D07G0885.1,GhM_A11G1971.1,GhM_D11G1958.1,GhM_D07G2096.1,GhM_D07G2097.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G02010||AT3G17760 | GAD5; GAD5 (glutamate decarboxylase 5); calmodulin binding||GAD4; GAD4 (glutamate decarboxylase 4); calmodulin binding | GO:0006540|glutamate decarboxylation to succinate;GO:0005634|nucleus;GO:0005516|calmodulin binding;GO:0005829|cytosol;GO:0006536|glutamate metabolic process;GO:0019752|carboxylic acid metabolic process;GO:0005575|cellular_component | GhM_A01G1744.1,GhM_D01G1732.1,GhM_A03G1523.1,GhM_D02G1636.1,GhM_A09G2123.1,GhM_D09G2031.1,GhM_A12G1992.1,GhM_D12G1903.1,GhM_A12G3326.1,GhM_D12G3212.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G12990||AT3G27540 | glycosyl transferase family 17 protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0006487|protein amino acid N-linked glycosylation;GO:0008375|acetylglucosaminyltransferase activity | GhM_A01G1972.1,GhM_D01G1957.1,GhM_A05G3652.1,GhM_D05G3609.1,GhM_A05G4257.1,GhM_D04G0681.1,GhM_A09G0405.1,GhM_D09G0372.1,GhM_A12G1899.1,GhM_D12G1826.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G14520||AT4G33700 | CBS domain-containing protein | GO:0012505|endomembrane system;GO:0005886|plasma membrane;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2246.1,GhM_D02G2760.1,GhM_A02G1299.1,GhM_D12G0459.1,GhM_A03G2744.1,GhM_A12G0337.1,GhM_D03G0326.1,GhM_A02G1941.1,GhM_D01G2205.1,GhM_D01G2204.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G51460||AT4G12430 | ATTPPA; ATTPPA; trehalose-phosphatase||trehalose-6-phosphate phosphatase, putative | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0004805|trehalose-phosphatase activity;GO:0005992|trehalose biosynthetic process | GhM_A01G2416.1,GhM_A12G2522.1,GhM_A03G0790.1,GhM_D03G1307.1,GhM_D12G2407.1,GhM_A03G0183.1,GhM_D03G1917.1,GhM_A12G2737.1,GhM_D12G2623.1,GhM_A08G3222.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G10960||AT4G23920 | UGE2; UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2); UDP-glucose 4-epimerase/ protein dimerization||UGE5; UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5); UDP-glucose 4-epimerase/ protein dimerization | GO:0012505|endomembrane system;GO:0006950|response to stress;GO:0003978|UDP-glucose 4-epimerase activity;GO:0046983|protein dimerization activity;GO:0005829|cytosol;GO:0042546|cell wall biogenesis | GhM_A01G2622.1,GhM_D01G2550.1,GhM_A02G1225.1,GhM_A08G1445.1,GhM_A05G4700.1,GhM_D04G0240.1,GhM_A09G2309.1,GhM_D09G2208.1,GhM_D03G1008.1,GhM_D08G1430.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G01860 | EMB975; EMB975 (EMBRYO DEFECTIVE 975) | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A01G2865.1,GhM_A13G0008.1,GhM_A06G0007.1,GhM_A11G4136.1,GhM_A01G2866.1,GhM_D08G0003.1,GhM_A06G0006.1,GhM_D02G0009.1,GhM_D11G4029.1,GhM_D08G3165.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G04930 | ALA1; ALA1 (aminophospholipid ATPase1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | GO:0006754|ATP biosynthetic process;GO:0015914|phospholipid transport | GhM_A02G0031.1,GhM_D02G0040.1,GhM_A09G0790.1,GhM_D09G0731.1,GhM_A10G2458.1,GhM_A05G4710.1,GhM_D04G0230.1,GhM_D10G2384.1,GhM_D03G1003.1,GhM_D08G1483.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G48570 | ROF2, ATFKBP65; peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative | GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0005516|calmodulin binding;GO:0006457|protein folding;GO:0005528|FK506 binding;GO:0005773|vacuole | GhM_A02G0182.1,GhM_A10G1610.1,GhM_A07G1103.1,GhM_D07G1086.1,GhM_A09G2521.1,GhM_D09G2403.1,GhM_A11G1659.1,GhM_D11G1646.1,GhM_D10G1501.1,GhM_D02G0191.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G16780||AT1G02780||AT4G02230 | 60S ribosomal protein L19 (RPL19C)||60S ribosomal protein L19 (RPL19B)||emb2386; emb2386 (embryo defective 2386); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A02G0573.1,GhM_D02G0560.1,GhM_A09G2877.1,GhM_A10G2099.1,GhM_D10G2037.1,GhM_A11G1323.1,GhM_D11G1324.1,GhM_A12G1672.1,GhM_D12G1618.1,GhM_D09G2749.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G52560 | ATUSP; ATUSP (ARABIDOPSIS THALIANA UDP-SUGAR PYROPHOSPHORYLASE); UTP-monosaccharide-1-phosphate uridylyltransferase/ UTP:arabinose-1-phosphate uridylyltransferase/ UTP:galactose-1-phosphate uridylyltransferase/ UTP:glucose-1-phosphate uridylyltransferase/ UTP:xy | GO:0012505|endomembrane system;GO:0010491|UTP:arabinose-1-phosphate uridylyltransferase activity;GO:0047350|glucuronate-1-phosphate uridylyltransferase activity;GO:0047338|UTP:xylose-1-phosphate uridylyltransferase activity;GO:0046686|response to cadmium ion;GO:0051748|UTP-monosaccharide-1-phosphate uridylyltransferase activity;GO:0003983|UTP:glucose-1-phosphate uridylyltransferase activity;GO:0017103|UTP:galactose-1-phosphate uridylyltransferase activity | GhM_A02G0834.1,GhM_D08G2782.1,GhM_A02G0835.1,GhM_A08G2834.1,GhM_A02G1397.1,GhM_D03G0744.1,GhM_A05G2666.1,GhM_A10G1145.1,GhM_D02G0825.1,GhM_D02G0824.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G75590||AT5G10990 | auxin-responsive family protein | GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1061.1,GhM_A06G0056.1,GhM_A05G2098.1,GhM_D05G2119.1,GhM_A05G2879.1,GhM_D05G2885.1,GhM_D01G1206.1,GhM_D06G0053.1,GhM_D02G1095.1,GhM_A07G2670.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G20270||AT5G66060 | iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0019538|protein metabolic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0016491|oxidoreductase activity | GhM_A02G1075.1,GhM_D02G1108.1,GhM_A05G2050.1,GhM_D05G2064.1,GhM_A05G2864.1,GhM_D05G2865.1,GhM_A11G1997.1,GhM_D11G1987.1,GhM_A12G0665.1,GhM_D12G0665.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G74670||AT3G02885||AT5G15230 | gibberellin-responsive protein, putative||GASA4; GASA4 (GAST1 PROTEIN HOMOLOG 4)||GASA5; GASA5 (GAST1 PROTEIN HOMOLOG 5) | GO:0012505|endomembrane system;GO:0009750|response to fructose stimulus;GO:0009739|response to gibberellin stimulus;GO:0009744|response to sucrose stimulus;GO:0003674|molecular_function;GO:0009749|response to glucose stimulus | GhM_A02G1332.1,GhM_D03G0891.1,GhM_A07G1473.1,GhM_D07G1446.1,GhM_D07G0942.1,GhM_A07G0944.1,GhM_A09G0195.1,GhM_D09G0186.1,GhM_D04G0567.1,GhM_A05G4374.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G16060 | kinesin motor family protein | GO:0007018|microtubule-based movement;GO:0005634|nucleus;GO:0003777|microtubule motor activity;GO:0005886|plasma membrane;GO:0005524|ATP binding | GhM_A02G1584.1,GhM_D03G0801.1,GhM_A05G1430.1,GhM_D05G1444.1,GhM_D10G0753.1,GhM_A10G0903.1,GhM_A08G3100.1,GhM_A05G0248.1,GhM_D05G0257.1,GhM_D08G3030.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G15610 | transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0000166|nucleotide binding | GhM_A02G1637.1,GhM_D03G0837.1,GhM_A05G0213.1,GhM_D05G0217.1,GhM_A06G0692.1,GhM_D06G0698.1,GhM_A08G3085.1,GhM_D08G3016.1,GhM_A10G0860.1,GhM_D10G0782.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G49870||AT5G37680 | ATARLA1A; ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding||ATARLA1C; ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding | GO:0012505|endomembrane system;GO:0005525|GTP binding;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A02G1961.1,GhM_D03G0304.1,GhM_A03G2407.1,GhM_D02G2426.1,GhM_A08G0456.1,GhM_D08G0442.1,GhM_A11G2551.1,GhM_D11G2342.1,GhM_A13G0512.1,GhM_D13G0499.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G49910 | 60S ribosomal protein L26 (RPL26A) | GO:0009507|chloroplast;GO:0005634|nucleus;GO:0005730|nucleolus;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A02G1967.1,GhM_D03G0297.1,GhM_A08G2928.1,GhM_D08G2866.1,GhM_A10G1023.1,GhM_D10G1063.1,GhM_A11G0589.1,GhM_A11G2557.1,GhM_D11G0584.1,GhM_D11G2334.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G45620||AT4G19006 | 26S proteasome regulatory subunit, putative (RPN9) | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0030163|protein catabolic process;GO:0008541|proteasome regulatory particle, lid subcomplex | GhM_A03G0030.1,GhM_D03G2074.1,GhM_A08G1512.1,GhM_A09G0351.1,GhM_A08G2039.1,GhM_D08G1989.1,GhM_A09G0352.1,GhM_D11G0342.1,GhM_A11G0357.1,GhM_A12G0500.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G26260||AT1G14520||AT2G19800 | MIOX1; MIOX1 (MYO-INISITOL OXYGENASE); inositol oxygenase/ oxidoreductase||MIOX4; MIOX4; inositol oxygenase||MIOX2; MIOX2 (MYO-INOSITOL OXYGENASE 2); inositol oxygenase | GO:0019853|L-ascorbic acid biosynthetic process;GO:0006949|syncytium formation;GO:0005737|cytoplasm;GO:0050113|inositol oxygenase activity | GhM_A03G0060.1,GhM_D03G2043.1,GhM_A05G1476.1,GhM_D05G1490.1,GhM_A10G0705.1,GhM_D10G0685.1,GhM_D06G0827.1,GhM_A06G0823.1,GhM_A12G2622.1,GhM_D12G2510.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G17895||AT5G46740||AT3G20290||AT2G29550 | UBP21; UBP21 (UBIQUITIN-SPECIFIC PROTEASE 21); ubiquitin thiolesterase/ ubiquitin-specific protease||UBP20; UBP20 (UBIQUITIN-SPECIFIC PROTEASE 20); ubiquitin thiolesterase/ ubiquitin-specific protease||TUB7; TUB7; structural constituent of cytoskeleton||ATEHD1; ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0003924|GTPase activity;GO:0004221|ubiquitin thiolesterase activity;GO:0046686|response to cadmium ion;GO:0045298|tubulin complex;GO:0005886|plasma membrane;GO:0005792|microsome;GO:0005525|GTP binding;GO:0005768|endosome;GO:0005618|cell wall;GO:0016020|membrane;GO:0005773|vacuole;GO:0005200|structural constituent of cytoskeleton;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0006897|endocytosis;GO:0007017|microtubule-based process;GO:0009507|chloroplast;GO:0005509|calcium ion binding | GhM_A03G0065.1,GhM_D03G2038.1,GhM_D10G1934.1,GhM_A11G0340.1,GhM_D11G0326.1,GhM_D04G0964.1,GhM_D01G1505.1,GhM_D04G0506.1,GhM_D02G1634.1,GhM_D04G1065.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G11820 | MVA1, HMGS, EMB2778; MVA1; acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase | GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway;GO:0005575|cellular_component;GO:0004421|hydroxymethylglutaryl-CoA synthase activity | GhM_A03G0242.1,GhM_D03G1872.1,GhM_A08G2323.1,GhM_D08G2269.1,GhM_A12G0611.1,GhM_A07G0925.1,GhM_A10G1322.1,GhM_A12G0187.1,GhM_A12G2798.1,GhM_D12G2686.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G63800||AT5G41340 | UBC4, ATUBC4; UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase||UBC5; UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component | GhM_A03G0307.1,GhM_D03G1817.1,GhM_A07G0754.1,GhM_D07G0742.1,GhM_A09G2099.1,GhM_D09G2011.1,GhM_A11G0250.1,GhM_D11G0245.1,GhM_A12G2853.1,GhM_D12G2740.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G41410 | BEL1; BEL1 (BELL 1); DNA binding / protein binding / transcription factor | GO:0005515|protein binding;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005829|cytosol;GO:0048481|ovule development | GhM_A03G0325.1,GhM_D03G1799.1,GhM_Scaf038G165.1,GhM_D08G1521.1,GhM_A08G1571.1,GhM_Scaf038G164.1,GhM_A08G1572.1,GhM_A12G2863.1,GhM_D12G2751.1,GhM_Scaf038G166.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G23490||AT5G41460 | fringe-related protein | GO:0008150|biological_process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A03G0326.1,GhM_D03G1798.1,GhM_A08G1570.1,GhM_Scaf037G163.1,GhM_A12G2864.1,GhM_A12G1431.1,GhM_A11G1059.1,GhM_D11G1070.1,GhM_D08G1520.1,GhM_D12G1361.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G28315||AT1G06890 | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: transporter-related (TAIR:AT1G06890.2); Has 1852 Blast hits to 1847 proteins in 207 species: Archae - 0; Bacteria - 58; Metazoa - 582; Fungi - 250; Plants - 685; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).||transporter-related | GO:0016020|membrane;GO:0005794|Golgi apparatus | GhM_A03G0462.1,GhM_D03G1668.1,GhM_A05G1147.1,GhM_D05G1164.1,GhM_A08G2578.1,GhM_D08G2517.1,GhM_D08G0010.1,GhM_A08G0017.1,GhM_A08G2635.1,GhM_D08G2579.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G59420||AT5G02100 | ORP3C; ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding||UNE18, ORP3A; UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding | GO:0008142|oxysterol binding;GO:0008202|steroid metabolic process;GO:0032934|sterol binding;GO:0005575|cellular_component;GO:0009567|double fertilization forming a zygote and endosperm;GO:0005783|endoplasmic reticulum | GhM_A03G0607.1,GhM_D05G2323.1,GhM_A05G1042.1,GhM_D05G1053.1,GhM_A09G1929.1,GhM_D09G1828.1,GhM_D07G2667.1,GhM_D01G1416.1,GhM_D11G2283.1,GhM_D09G0789.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G01380||AT3G20720 | unknown protein||catalytic/ transferase | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0006506|GPI anchor biosynthetic process;GO:0016740|transferase activity;GO:0005783|endoplasmic reticulum | GhM_A03G0712.1,GhM_D03G1397.1,GhM_D06G0426.1,GhM_D05G4027.1,GhM_A07G2804.1,GhM_D07G2711.1,GhM_D06G0878.1,GhM_D08G1849.1,GhM_D11G3568.1,GhM_D13G1027.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G07350||AT5G61780 | tudor domain-containing protein / nuclease family protein | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0016788|hydrolase activity, acting on ester bonds;GO:0046686|response to cadmium ion;GO:0016442|RNA-induced silencing complex;GO:0003676|nucleic acid binding;GO:0004518|nuclease activity;GO:0005618|cell wall;GO:0005886|plasma membrane | GhM_A03G0747.1,GhM_D03G1355.1,GhM_A11G0485.1,GhM_D11G0466.1,GhM_A12G2472.1,GhM_D12G2357.1,GhM_D07G2453.1,GhM_D07G2454.1,GhM_D09G0437.1,GhM_D09G0438.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G07440||AT5G18170 | GDH1; GDH1 (GLUTAMATE DEHYDROGENASE 1); ATP binding / glutamate dehydrogenase [NAD(P)+]/ oxidoreductase||GDH2; GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase | GO:0005507|copper ion binding;GO:0004352|glutamate dehydrogenase activity;GO:0006807|nitrogen compound metabolic process;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0004353|glutamate dehydrogenase [NAD(P)+] activity;GO:0005886|plasma membrane;GO:0050897|cobalt ion binding;GO:0009646|response to absence of light;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0016491|oxidoreductase activity | GhM_A03G0830.1,GhM_D03G1273.1,GhM_A08G2736.1,GhM_D08G2678.1,GhM_A11G3258.1,GhM_D11G3178.1,GhM_A12G2485.1,GhM_D12G2369.1,GhM_A12G2678.1,GhM_D12G2566.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G62740||AT1G69840 | band 7 family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A03G0875.1,GhM_D03G1106.1,GhM_A07G0784.1,GhM_D07G0781.1,GhM_A09G0942.1,GhM_A10G0635.1,GhM_A10G1150.1,GhM_D10G0950.1,GhM_A12G2142.1,GhM_D12G2050.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G24740||AT3G53570||AT4G32660 | AME3; AME3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||AFC1, AME2; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||AFC2, AME1; AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2); kinase/ protein kinase | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0045449|regulation of transcription;GO:0006397|mRNA processing;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A03G1010.1,GhM_D03G1237.1,GhM_A04G1044.1,GhM_D04G1497.1,GhM_A07G0679.1,GhM_D07G0671.1,GhM_A05G0539.1,GhM_A06G1137.1,GhM_D06G1165.1,GhM_D05G0565.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G03480||AT1G13860 | dehydration-responsive protein-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005739|mitochondrion | GhM_A03G1401.1,GhM_D02G1523.1,GhM_A12G2091.1,GhM_D12G1993.1,GhM_A13G0991.1,GhM_A12G2089.1,GhM_D12G1992.1,GhM_A12G2090.1,GhM_D13G0928.1,GhM_D02G1524.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G01830 | WOL, CRE1, WOL1, AHK4, ATCRE1; WOL (WOODEN LEG); cytokinin receptor/ osmosensor/ phosphoprotein phosphatase/ protein histidine kinase | GO:0048831|regulation of shoot development;GO:0005034|osmosensor activity;GO:0009736|cytokinin mediated signaling pathway;GO:0010029|regulation of seed germination;GO:0004721|phosphoprotein phosphatase activity;GO:0006468|protein amino acid phosphorylation;GO:0010086|embryonic root morphogenesis;GO:0009884|cytokinin receptor activity;GO:0009414|response to water deprivation;GO:0004673|protein histidine kinase activity;GO:0019955|cytokine binding;GO:0016020|membrane;GO:0042742|defense response to bacterium | GhM_A03G1502.1,GhM_D02G1614.1,GhM_A12G2003.1,GhM_A03G1503.1,GhM_D02G1615.1,GhM_A05G4288.1,GhM_D04G0648.1,GhM_A13G0324.1,GhM_D13G0309.1,GhM_D12G1913.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G26490 | transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0005834|heterotrimeric G-protein complex | GhM_A03G1555.1,GhM_D02G1035.1,GhM_A07G2669.1,GhM_A05G2216.1,GhM_D05G2236.1,GhM_A05G2917.1,GhM_D05G2933.1,GhM_A12G1475.1,GhM_A06G0142.1,GhM_D06G0139.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G23750||AT2G33845 | DNA-binding protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1888.1,GhM_D02G1943.1,GhM_A05G1795.1,GhM_D05G1810.1,GhM_A06G2575.1,GhM_D06G2567.1,GhM_A12G1867.1,GhM_A05G3684.1,GhM_D05G3639.1,GhM_D12G1801.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G33650||AT2G14120 | DRP3B; dynamin-like protein 2b (ADL2b)||ADL2, DRP3A; DRP3A (DYNAMIN-RELATED PROTEIN 3A); GTP binding / GTPase/ phosphoinositide binding | GO:0009941|chloroplast envelope;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0035091|phosphoinositide binding;GO:0009658|chloroplast organization;GO:0005739|mitochondrion;GO:0005829|cytosol;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0000266|mitochondrial fission;GO:0016020|membrane;GO:0016559|peroxisome fission | GhM_A03G2357.1,GhM_D02G2375.1,GhM_A12G0184.1,GhM_D12G0194.1,GhM_A12G0185.1,GhM_D13G0544.1,GhM_A13G0559.1,GhM_A12G1781.1,GhM_A08G1118.1,GhM_A08G1119.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G33920 | protein phosphatase 2C family protein / PP2C family protein | GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0008287|protein serine/threonine phosphatase complex;GO:0005739|mitochondrion;GO:0004722|protein serine/threonine phosphatase activity | GhM_A03G2425.1,GhM_D02G2446.1,GhM_A09G0514.1,GhM_D02G0244.1,GhM_A10G1082.1,GhM_A13G0492.1,GhM_A11G2592.1,GhM_D11G2306.1,GhM_D11G1568.1,GhM_D13G0481.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G14960 | GH3.1; GH3.1 | GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G2437.1,GhM_D02G2460.1,GhM_A11G0583.1,GhM_D11G0578.1,GhM_A11G2607.1,GhM_D11G2295.1,GhM_A12G0223.1,GhM_D12G0230.1,GhM_A13G0488.1,GhM_D13G0477.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G50530||AT3G56760 | calcium-dependent protein kinase, putative / CDPK, putative||CRK; CRK (CDPK-related kinase); ATP binding / calcium ion binding / calcium-dependent protein serine/threonine phosphatase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0004723|calcium-dependent protein serine/threonine phosphatase activity;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G2507.1,GhM_D02G2530.1,GhM_A09G1481.1,GhM_D09G1387.1,GhM_A11G2219.1,GhM_D11G2195.1,GhM_A12G0823.1,GhM_D12G0805.1,GhM_A13G0428.1,GhM_D13G0414.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G16570||AT4G34740 | ATASE2, CIA1, ATPURF2; ATASE2 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2); amidophosphoribosyltransferase||ATASE, ATASE1; ATASE1 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1); amidophosphoribosyltransferase | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0004044|amidophosphoribosyltransferase activity;GO:0005618|cell wall;GO:0009113|purine base biosynthetic process | GhM_A03G2596.1,GhM_D02G2622.1,GhM_A04G0297.1,GhM_A13G1091.1,GhM_A07G2025.1,GhM_D13G1126.1,GhM_A12G0449.1,GhM_D12G0345.1,GhM_A12G0450.1,GhM_D04G1731.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G03840||AT2G27550||AT5G62040 | TFL1, TFL-1; TFL1 (TERMINAL FLOWER 1); phosphatidylethanolamine binding||brother of FT and TFL1 protein (BFT)||ATC; ATC (ARABIDOPSIS THALIANA CENTRORADIALIS); phosphatidylethanolamine binding | GO:0008150|biological_process;GO:0009744|response to sucrose stimulus;GO:0008429|phosphatidylethanolamine binding;GO:0006623|protein targeting to vacuole;GO:0005737|cytoplasm;GO:0009910|negative regulation of flower development;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0031982|vesicle;GO:0005773|vacuole | GhM_A04G0791.1,GhM_D04G1262.1,GhM_A07G1322.1,GhM_D07G1304.1,GhM_A09G1748.1,GhM_D09G1654.1,GhM_D11G0113.1,GhM_A08G1332.1,GhM_D08G1254.1,GhM_A11G0110.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G42990 | ATBZIP60, BZIP60; ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60); DNA binding / transcription factor | GO:0005789|endoplasmic reticulum membrane;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0030968|endoplasmic reticulum unfolded protein response | GhM_A04G1169.1,GhM_D05G3300.1,GhM_A05G3317.1,GhM_A05G4868.1,GhM_D04G0081.1,GhM_A05G4867.1,GhM_D04G1642.1,GhM_A08G2550.1,GhM_D06G1271.1,GhM_D03G1897.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G01520||AT3G47160||AT5G58787 | zinc finger (C3HC4-type RING finger) family protein||protein binding / zinc ion binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A04G1173.1,GhM_D04G1646.1,GhM_A05G0975.1,GhM_D05G0991.1,GhM_A09G0994.1,GhM_D09G0930.1,GhM_A10G0263.1,GhM_D10G0248.1,GhM_A13G2883.1,GhM_D13G2785.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G26880 | 60S ribosomal protein L34 (RPL34A) | GO:0009507|chloroplast;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A04G1921.1,GhM_D04G2391.1,GhM_A05G4366.1,GhM_D04G0572.1,GhM_A09G0201.1,GhM_D09G0193.1,GhM_A12G2126.1,GhM_D12G2032.1,GhM_A12G2256.1,GhM_D12G2154.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G57610||AT3G46920||AT2G35050 | protein kinase family protein | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0005575|cellular_component | GhM_A05G0070.1,GhM_D05G0070.1,GhM_D05G0071.1,GhM_A05G0126.1,GhM_D05G0133.1,GhM_A08G1178.1,GhM_D08G1044.1,GhM_D05G0072.1,GhM_A12G0530.1,GhM_D12G0523.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G11150||AT4G32150 | VAMP711, ATVAMP711; ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711)||ATVAMP713, VAMP713; ATVAMP713 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 713) | GO:0005774|vacuolar membrane;GO:0006944|cellular membrane fusion;GO:0003674|molecular_function;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0046909|intermembrane transport;GO:0005773|vacuole | GhM_A05G0153.1,GhM_D05G0161.1,GhM_A06G0631.1,GhM_D06G0625.1,GhM_A07G0377.1,GhM_A05G0613.1,GhM_D05G0632.1,GhM_A13G2426.1,GhM_D13G2323.1,GhM_D07G0376.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G32390||AT5G25400 | phosphate translocator-related | GO:0012505|endomembrane system;GO:0008514|organic anion transmembrane transporter activity | GhM_A05G0179.1,GhM_D05G0189.1,GhM_A05G0597.1,GhM_D05G0617.1,GhM_A06G1188.1,GhM_D06G1216.1,GhM_A08G3218.1,GhM_A13G2434.1,GhM_D13G2331.1,GhM_D08G3152.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G26730 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0225.1,GhM_D05G0230.1,GhM_A06G0701.1,GhM_D06G0707.1,GhM_A07G0036.1,GhM_D07G0040.1,GhM_A08G3088.1,GhM_D08G3018.1,GhM_D13G2500.1,GhM_A13G2588.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G29160||AT2G19830 | SNF7.2, VPS32; SNF7.2||SNF7.1; SNF7.1 | GO:0005886|plasma membrane;GO:0016192|vesicle-mediated transport;GO:0000815|ESCRT III complex | GhM_A05G0295.1,GhM_D05G0309.1,GhM_A06G0827.1,GhM_D06G0835.1,GhM_A07G0120.1,GhM_D07G0119.1,GhM_A08G3136.1,GhM_D08G3062.1,GhM_A13G2560.1,GhM_D13G2474.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G20540||AT1G54180 | ATBRXL3, BRX-LIKE3; BRX-LIKE3 (BREVIS RADIX-LIKE 3)||ATBRXL4, BRX-LIKE4; ATBRXL4 (BREVIS RADIX-LIKE 4) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0352.1,GhM_D05G0371.1,GhM_A06G0894.1,GhM_A05G1537.1,GhM_D05G1551.1,GhM_A05G4830.1,GhM_D04G0120.1,GhM_D06G0900.1,GhM_A13G2534.1,GhM_D13G2448.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G13000||AT4G33130 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT3G13000.2); Has 77 Blast hits to 77 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||transcription factor | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005773|vacuole | GhM_A05G0403.1,GhM_D05G0421.1,GhM_A07G0211.1,GhM_D07G0212.1,GhM_D01G1112.1,GhM_D09G1746.1,GhM_D03G1362.1,GhM_D05G4083.1,GhM_D06G1070.1,GhM_D12G1622.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G72820 | mitochondrial substrate carrier family protein | GO:0016020|membrane | GhM_A05G0429.1,GhM_D05G0449.1,GhM_A06G1029.1,GhM_D06G1026.1,GhM_A06G2481.1,GhM_A05G1535.1,GhM_D05G1549.1,GhM_D06G2480.1,GhM_A13G2491.1,GhM_D13G2389.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G26190||AT2G26180 | IQD6; IQD6 (IQ-domain 6); calmodulin binding||calmodulin-binding family protein | GO:0005575|cellular_component;GO:0005516|calmodulin binding;GO:0006499|N-terminal protein myristoylation | GhM_A05G0448.1,GhM_D05G0471.1,GhM_A07G0253.1,GhM_D07G0253.1,GhM_D08G0931.1,GhM_D07G0252.1,GhM_A13G2487.1,GhM_A08G3176.1,GhM_D08G3103.1,GhM_D13G2385.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G46210||AT3G61580 | delta-8 sphingolipid desaturase, putative||delta-8 sphingolipid desaturase (SLD1) | GO:0006633|fatty acid biosynthetic process;GO:0016717|oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water;GO:0020037|heme binding;GO:0006629|lipid metabolic process;GO:0005506|iron ion binding;GO:0016491|oxidoreductase activity | GhM_A05G0455.1,GhM_D05G0478.1,GhM_A07G1718.1,GhM_D07G1686.1,GhM_A11G1080.1,GhM_D11G1093.1,GhM_A12G1451.1,GhM_D12G1389.1,GhM_A08G3178.1,GhM_D08G3105.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G11790||AT5G56750||AT2G19620 | Ndr family protein | GO:0030154|cell differentiation;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0468.1,GhM_D05G0493.1,GhM_A06G0843.1,GhM_D06G0850.1,GhM_A06G1070.1,GhM_D06G1086.1,GhM_A07G0127.1,GhM_D07G0126.1,GhM_A07G0262.1,GhM_D07G0261.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G31860||AT2G25070 | protein phosphatase 2C, putative / PP2C, putative | GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A05G0660.1,GhM_D05G0680.1,GhM_A05G1306.1,GhM_D05G1321.1,GhM_A06G1259.1,GhM_D06G1280.1,GhM_A06G2377.1,GhM_D06G2385.1,GhM_A07G0414.1,GhM_D07G0413.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G17370||AT3G14100 | UBP1B; UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding||oligouridylate-binding protein, putative | GO:0003730|mRNA 3'-UTR binding | GhM_A05G1553.1,GhM_D05G1567.1,GhM_A06G0937.1,GhM_D06G0945.1,GhM_A06G2491.1,GhM_D06G2489.1,GhM_A07G0189.1,GhM_D07G0188.1,GhM_A10G0626.1,GhM_D10G0598.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G18160||AT4G01840 | KCO5, ATTPK5, ATKCO5, TPK5; KCO5 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5); outward rectifier potassium channel||KCO6, ATTPK3, ATKCO6, TPK3; KCO6; outward rectifier potassium channel | GO:0006813|potassium ion transport;GO:0009705|plant-type vacuole membrane;GO:0015271|outward rectifier potassium channel activity | GhM_A05G1688.1,GhM_D05G1696.1,GhM_A06G1782.1,GhM_D06G1772.1,GhM_A06G2536.1,GhM_D06G2529.1,GhM_A11G1219.1,GhM_A08G1653.1,GhM_D08G1611.1,GhM_D11G1223.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G18100 | 60S ribosomal protein L32 (RPL32A) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A05G1694.1,GhM_A09G1071.1,GhM_A07G1099.1,GhM_D11G1653.1,GhM_A11G1667.1,GhM_D10G0397.1,GhM_D05G1705.1,GhM_D09G1008.1,GhM_D08G1814.1,GhM_A10G0407.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G42740 | RPL16A; RPL16A; structural constituent of ribosome | GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005773|vacuole | GhM_A05G1735.1,GhM_A06G1714.1,GhM_A06G2553.1,GhM_A10G0382.1,GhM_A09G1023.1,GhM_D09G0958.1,GhM_D05G1743.1,GhM_D06G1730.1,GhM_D10G0370.1,GhM_D06G2546.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G56340||AT2G40600 | appr-1-p processing enzyme family protein||40S ribosomal protein S26 (RPS26C) | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane;GO:0009507|chloroplast | GhM_A05G3133.1,GhM_D05G3129.1,GhM_A06G2346.1,GhM_A10G2249.1,GhM_D10G2173.1,GhM_A13G0079.1,GhM_D10G2180.1,GhM_A10G2254.1,GhM_D13G0085.1,GhM_D06G2354.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G22060 | ATJ2, J2; ATJ2; protein binding | GO:0005515|protein binding;GO:0006457|protein folding | GhM_A05G3247.1,GhM_D05G3230.1,GhM_A06G2252.1,GhM_D06G2229.1,GhM_A07G1369.1,GhM_D07G1347.1,GhM_A09G1323.1,GhM_D09G1251.1,GhM_A11G0891.1,GhM_D11G0906.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G60160 | potassium transporter family protein | GO:0006813|potassium ion transport;GO:0009507|chloroplast;GO:0015079|potassium ion transmembrane transporter activity | GhM_A05G3852.1,GhM_D05G3701.1,GhM_D05G3776.1,GhM_D02G1162.1,GhM_D08G1775.1,GhM_D10G1035.1,GhM_D04G1225.1,GhM_D05G3777.1,GhM_D10G1033.1,GhM_D01G0906.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G50460 | protein transport protein SEC61 gamma subunit, putative | GO:0015031|protein transport;GO:0016020|membrane;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity | GhM_A05G4016.1,GhM_D04G0907.1,GhM_A07G2930.1,GhM_A10G0797.1,GhM_D10G0844.1,GhM_A11G0750.1,GhM_D07G2827.1,GhM_A12G2410.1,GhM_D12G2304.1,GhM_D11G0762.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G27080 | TOM20-3; TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0005742|mitochondrial outer membrane translocase complex;GO:0006626|protein targeting to mitochondrion;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005739|mitochondrion;GO:0005741|mitochondrial outer membrane;GO:0005744|mitochondrial inner membrane presequence translocase complex;GO:0005743|mitochondrial inner membrane | GhM_A05G4020.1,GhM_D04G0909.1,GhM_A09G0492.1,GhM_D09G0449.1,GhM_A09G2313.1,GhM_A13G1840.1,GhM_A10G2088.1,GhM_A10G0799.1,GhM_D10G0842.1,GhM_A10G1981.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G28480||AT3G28490 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0012505|endomembrane system;GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0019538|protein metabolic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | GhM_A05G4332.1,GhM_D04G0606.1,GhM_A09G0310.1,GhM_D09G0281.1,GhM_A11G3800.1,GhM_A10G1642.1,GhM_A13G1855.1,GhM_D08G3122.1,GhM_A12G2387.1,GhM_D11G0808.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G10950 | 60S ribosomal protein L37a (RPL37aB) | GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A06G0755.1,GhM_A08G1887.1,GhM_A09G2398.1,GhM_A08G2135.1,GhM_D08G1838.1,GhM_A12G2669.1,GhM_D08G2091.1,GhM_D06G0755.1,GhM_D09G2287.1,GhM_D12G2558.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G12390||AT4G10480 | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | GO:0008150|biological_process;GO:0022626|cytosolic ribosome;GO:0003674|molecular_function;GO:0009651|response to salt stress;GO:0005575|cellular_component | GhM_A06G2303.1,GhM_D06G2307.1,GhM_A10G2425.1,GhM_D10G2351.1,GhM_A13G0048.1,GhM_D13G0050.1,GhM_A08G1509.1,GhM_D08G1342.1,GhM_A12G3026.1,GhM_D12G2912.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G03890||AT1G13640||AT1G26270 | phosphatidylinositol 3- and 4-kinase family protein | GO:0016773|phosphotransferase activity, alcohol group as acceptor;GO:0004428|inositol or phosphatidylinositol kinase activity;GO:0005575|cellular_component | GhM_A07G0711.1,GhM_D07G0703.1,GhM_D12G0651.1,GhM_A12G0650.1,GhM_D12G0650.1,GhM_A12G2054.1,GhM_D12G1957.1,GhM_A13G1225.1,GhM_D13G0990.1,GhM_D07G0704.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G67170||AT1G24180||AT1G59900 | unknown protein||AT-E1 ALPHA; AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)||IAR4; IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0004739|pyruvate dehydrogenase (acetyl-transferring) activity;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0016624|oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0050897|cobalt ion binding;GO:0008270|zinc ion binding | GhM_A07G0872.1,GhM_D07G0874.1,GhM_D12G0616.1,GhM_D08G1001.1,GhM_D10G2541.1,GhM_D13G1296.1,GhM_D13G0581.1,GhM_D04G0639.1,GhM_D11G2560.1,GhM_D10G2540.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G07650 | COL9; COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0048579|negative regulation of long-day photoperiodism, flowering;GO:0008270|zinc ion binding | GhM_A07G1068.1,GhM_D07G1050.1,GhM_A07G2059.1,GhM_D07G1999.1,GhM_A07G2499.1,GhM_D07G2399.1,GhM_A08G0639.1,GhM_D08G0607.1,GhM_A11G1733.1,GhM_D11G1720.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G27690||AT5G53530 | VPS26B; VPS26B (VACUOLAR PROTEIN SORTING 26B)||VPS26A; VPS26A (VACUOLAR PROTEIN SORTING 26A) | GO:0030904|retromer complex;GO:0005792|microsome;GO:0005771|multivesicular body;GO:0003674|molecular_function;GO:0042147|retrograde transport, endosome to Golgi;GO:0007034|vacuolar transport;GO:0008333|endosome to lysosome transport;GO:0006886|intracellular protein transport;GO:0016020|membrane | GhM_A07G1426.1,GhM_D07G1407.1,GhM_A08G1354.1,GhM_D08G1234.1,GhM_A09G1386.1,GhM_D09G1304.1,GhM_A09G2257.1,GhM_D09G2164.1,GhM_A12G3046.1,GhM_D12G2929.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G01230||AT5G42000 | ORMDL family protein | GO:0006457|protein folding;GO:0016021|integral to membrane;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A07G1662.1,GhM_D07G1629.1,GhM_A08G1420.1,GhM_D08G1411.1,GhM_A11G1151.1,GhM_A12G1496.1,GhM_D12G1435.1,GhM_A12G2947.1,GhM_D12G2835.1,GhM_D11G1165.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G44950 | RDO4, HUB1; HUB1 (HISTONE MONO-UBIQUITINATION 1); protein binding / protein homodimerization/ ubiquitin-protein ligase/ zinc ion binding | GO:0005515|protein binding;GO:0009965|leaf morphogenesis;GO:0051301|cell division;GO:0010390|histone monoubiquitination;GO:0005634|nucleus;GO:0010389|regulation of G2/M transition of mitotic cell cycle;GO:0006513|protein monoubiquitination;GO:0033523|histone H2B ubiquitination;GO:0005739|mitochondrion;GO:0016049|cell growth;GO:0042803|protein homodimerization activity;GO:0010162|seed dormancy;GO:0009817|defense response to fungus, incompatible interaction;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0010228|vegetative to reproductive phase transition of meristem | GhM_A07G1875.1,GhM_A08G0392.1,GhM_D08G0380.1,GhM_A08G1859.1,GhM_D08G1809.1,GhM_A11G0893.1,GhM_D11G0908.1,GhM_A11G0894.1,GhM_D08G1735.1,GhM_Scaf043G173.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G29040||AT2G20140 | RPT2a; RPT2a (regulatory particle AAA-ATPase 2a); ATPase||26S protease regulatory complex subunit 4, putative | GO:0016787|hydrolase activity;GO:0016887|ATPase activity;GO:0046686|response to cadmium ion;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A07G1907.1,GhM_D11G2695.1,GhM_A07G2602.1,GhM_D07G2507.1,GhM_A08G2500.1,GhM_D08G2444.1,GhM_A11G2706.1,GhM_A11G2707.1,GhM_A11G2708.1,GhM_D07G1864.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G04520 | eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative | GO:0003723|RNA binding;GO:0006413|translational initiation;GO:0005575|cellular_component;GO:0003743|translation initiation factor activity | GhM_A07G2429.1,GhM_D07G2339.1,GhM_A08G0647.1,GhM_D11G1766.1,GhM_A08G1724.1,GhM_D08G1681.1,GhM_A11G1780.1,GhM_D08G0616.1,GhM_A12G1456.1,GhM_D12G1394.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G01100 | ADNT1; ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1); ADP transmembrane transporter/ AMP transmembrane transporter/ ATP transmembrane transporter/ binding | GO:0005347|ATP transmembrane transporter activity;GO:0015866|ADP transport;GO:0006810|transport;GO:0009536|plastid;GO:0005488|binding;GO:0015217|ADP transmembrane transporter activity;GO:0009060|aerobic respiration;GO:0005739|mitochondrion;GO:0006839|mitochondrial transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane;GO:0015867|ATP transport | GhM_A08G0434.1,GhM_D08G0420.1,GhM_A08G1386.1,GhM_D08G1469.1,GhM_A11G1103.1,GhM_D11G1117.1,GhM_A12G1466.1,GhM_D12G1402.1,GhM_A12G2904.1,GhM_D12G2793.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT2G46690||AT4G00880 | auxin-responsive family protein | GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0442.1,GhM_D08G0428.1,GhM_A08G1685.1,GhM_D08G1638.1,GhM_A12G1509.1,GhM_D12G1449.1,GhM_A12G3042.1,GhM_A08G1341.1,GhM_D08G1319.1,GhM_D12G2925.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G07590 | small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative | GO:0005886|plasma membrane;GO:0005732|small nucleolar ribonucleoprotein complex;GO:0005634|nucleus;GO:0003674|molecular_function | GhM_A08G0865.1,GhM_D08G0817.1,GhM_A08G2419.1,GhM_A12G0055.1,GhM_A11G1430.1,GhM_D11G1420.1,GhM_A11G1725.1,GhM_D11G1713.1,GhM_D08G2364.1,GhM_D12G0056.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G25800||AT1G25490 | RCN1, REGA, ATB BETA BETA, EER1; RCN1 (ROOTS CURL IN NPA); protein phosphatase type 2A regulator||PDF1, PR 65, PP2AA2; PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2); protein phosphatase type 2A regulator | GO:0009738|abscisic acid mediated signaling pathway;GO:0046686|response to cadmium ion;GO:0009926|auxin polar transport;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0009723|response to ethylene stimulus;GO:0042325|regulation of phosphorylation;GO:0010119|regulation of stomatal movement;GO:0008601|protein phosphatase type 2A regulator activity;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0000159|protein phosphatase type 2A complex | GhM_A08G1260.1,GhM_D08G1180.1,GhM_A11G0064.1,GhM_A12G2165.1,GhM_D12G2068.1,GhM_D13G0788.1,GhM_A12G3253.1,GhM_D12G3141.1,GhM_A13G0606.1,GhM_D11G0065.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT1G64650||AT4G27720 | LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64650.1); Has 496 Blast hits to 491 proteins in 183 species: Archae - 5; Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).||LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 565 Blast hits to 562 proteins in 197 species: Archae - 7; Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | GO:0005886|plasma membrane | GhM_A08G1356.1,GhM_D08G1231.1,GhM_A08G1413.1,GhM_D08G1405.1,GhM_A09G2256.1,GhM_D09G2163.1,GhM_A11G0176.1,GhM_D11G0174.1,GhM_A12G3047.1,GhM_D12G2930.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G62090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: SLK1 (SEUSS-LIKE 1); transcription regulator (TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742 species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752; Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI BLink). | GO:0048467|gynoecium development;GO:0003674|molecular_function;GO:0009790|embryonic development;GO:0005575|cellular_component;GO:0048481|ovule development | GhM_A08G1367.1,GhM_D08G1239.1,GhM_A11G0107.1,GhM_D11G0110.1,GhM_A12G3190.1,GhM_D12G3077.1,GhM_D09G0507.1,GhM_A09G0566.1,GhM_D09G0508.1,GhM_D09G0506.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT3G04920 | 40S ribosomal protein S24 (RPS24A) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A08G2747.1,GhM_A11G3215.1,GhM_A09G2648.1,GhM_D09G2531.1,GhM_A13G1431.1,GhM_D13G1329.1,GhM_A13G2291.1,GhM_D13G2175.1,GhM_D08G2690.1,GhM_D11G3132.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G14590||AT1G65930||AT1G54340 | ICDH; ICDH (ISOCITRATE DEHYDROGENASE); isocitrate dehydrogenase (NADP+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor||isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative | GO:0004450|isocitrate dehydrogenase (NADP+) activity;GO:0005507|copper ion binding;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0010043|response to zinc ion;GO:0005777|peroxisome;GO:0046686|response to cadmium ion;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0006102|isocitrate metabolic process;GO:0005886|plasma membrane | GhM_A09G0378.1,GhM_D09G0344.1,GhM_A10G1160.1,GhM_D10G0938.1,GhM_A11G1972.1,GhM_D11G1959.1,GhM_A13G1736.1,GhM_D13G1615.1,GhM_D01G2495.1,GhM_D05G4207.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT5G43745||AT2G23770 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein||phosphotransferase-related | GO:0016998|cell wall macromolecule catabolic process;GO:0012505|endomembrane system;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity | GhM_A09G0821.1,GhM_D09G0762.1,GhM_A09G2724.1,GhM_D09G2600.1,GhM_A09G2723.1,GhM_D10G1673.1,GhM_A10G1446.1,GhM_A10G1360.1,GhM_D10G1744.1,GhM_D10G1745.1 | 10 | 0 | Gossypium | Cotton | |||
| - | AT4G16720 | 60S ribosomal protein L15 (RPL15A) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane | GhM_A11G0307.1,GhM_D11G0292.1,GhM_A11G0494.1,GhM_D11G0476.1,GhM_A12G2706.1,GhM_D12G2593.1,GhM_D04G1138.1,GhM_D07G0522.1,GhM_D10G1137.1,GhM_D10G1509.1 | 10 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D01G0517.1,GhM_D03G0591.1,GhM_D07G2156.1,GhM_D01G1506.1,GhM_D06G1823.1,GhM_D03G1199.1,GhM_D10G2528.1,GhM_D08G0981.1,GhM_D03G1114.1,GhM_D07G2296.1 | 10 | 0 | Gossypium | Cotton | |||
| TA1093:GhM_A08G1675.1,GhM_A08G1676.1,GhM_A08G1677.1 | - | - | - | GhM_A01G1885.1,GhM_A03G1290.1,GhM_A05G3930.1,GhM_A07G1968.1,GhM_A10G1439.1,GhM_A13G1061.1,GhM_A08G1988.1 | 10 | 1 | Gossypium | Cotton | |||
| TA1119:GhM_A09G2413.1,GhM_A09G2417.1,GhM_A09G2422.1 | AT4G17800 | DNA-binding protein-related | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A03G0076.1,GhM_A08G2085.1,GhM_D09G2305.1,GhM_D08G2039.1,GhM_D03G2026.1,GhM_D12G2518.1,GhM_A12G2630.1 | 10 | 1 | Gossypium | Cotton | |||
| TA131:GhM_A10G2394.1,GhM_A10G2395.1,GhM_A10G2397.1,GhM_A10G2398.1,GhM_A10G2399.1,GhM_A10G2400.1 | AT3G14470||AT3G14460 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005524|ATP binding | GhM_D10G2418.1,GhM_A10G2502.1,GhM_D10G2329.1,GhM_D10G2328.1 | 10 | 1 | Gossypium | Cotton | |||
| TA1345:GhM_A11G4078.1,GhM_A11G4080.1 | AT5G02960 | 40S ribosomal protein S23 (RPS23B) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A01G2679.1,GhM_A05G3389.1,GhM_A09G1895.1,GhM_D01G2607.1,GhM_A13G1053.1,GhM_D05G3361.1,GhM_D09G1794.1,GhM_D13G1166.1 | 10 | 1 | Gossypium | Cotton | |||
| TA1529:GhM_A13G2341.1,GhM_A13G2342.1 | AT5G26990||AT3G05700 | drought-responsive family protein||INVOLVED IN: response to water deprivation; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: drought-responsive family protein (TAIR:AT5G26990.1); Has 167 Blast hits to 167 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0009414|response to water deprivation | GhM_A08G2668.1,GhM_A11G3398.1,GhM_A13G1517.1,GhM_D13G2232.1,GhM_D11G3310.1,GhM_D08G2612.1,GhM_D13G1400.1,GhM_D13G1401.1 | 10 | 1 | Gossypium | Cotton | |||
| TA1599:GhM_D01G1627.1,GhM_D01G1638.1 | AT1G10550||AT2G36870 | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative||XTH33, XET; XTH33; hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | GO:0012505|endomembrane system;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0005975|carbohydrate metabolic process;GO:0005887|integral to plasma membrane;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0006073|cellular glucan metabolic process;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0005618|cell wall | GhM_A01G1631.1,GhM_A01G1666.1,GhM_A04G0937.1,GhM_A09G1826.1,GhM_A11G4064.1,GhM_D09G1720.1,GhM_D04G1391.1,GhM_D11G3961.1 | 10 | 1 | Gossypium | Cotton | |||
| TA2513:GhM_D10G2522.1,GhM_D10G2524.1 | AT4G27960||AT3G08690||AT5G53300 | UBC10; UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase||UBC9; UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase||UBC11, ATUBC11; UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase | GO:0012505|endomembrane system;GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component | GhM_A09G2230.1,GhM_D09G2137.1,GhM_D11G0259.1,GhM_A02G1273.1,GhM_A08G1377.1,GhM_A11G0264.1,GhM_D03G0969.1,GhM_D08G1475.1 | 10 | 1 | Gossypium | Cotton | |||
| TA2671:GhM_D11G3893.1,GhM_D11G3894.1 | AT2G36060||AT1G23260 | MMZ1, UEV1A; MMZ1 (MMS ZWEI HOMOLOGUE 1); protein binding / ubiquitin-protein ligase||MMZ3, UEV1C; ubiquitin-conjugating enzyme family protein | GO:0005515|protein binding;GO:0031372|UBC13-MMS2 complex;GO:0006301|postreplication repair;GO:0004842|ubiquitin-protein ligase activity | GhM_A01G1830.1,GhM_A03G1609.1,GhM_A04G1866.1,GhM_A09G1710.1,GhM_D01G1785.1,GhM_D01G2458.1,GhM_D02G1682.1,GhM_D04G2337.1 | 10 | 1 | Gossypium | Cotton | |||
| TA2733:GhM_D12G1973.1,GhM_D12G1974.1 | AT1G13710||AT1G74110 | CYP78A5; CYP78A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP78A10; CYP78A10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0008284|positive regulation of cell proliferation;GO:0005575|cellular_component;GO:0010338|leaf formation;GO:0040009|regulation of growth rate;GO:0048437|floral organ development;GO:0020037|heme binding;GO:0046622|positive regulation of organ growth;GO:0005506|iron ion binding;GO:0035265|organ growth;GO:0019825|oxygen binding;GO:0010075|regulation of meristem growth;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | GhM_A12G2070.1,GhM_A12G2071.1,GhM_A13G0970.1,GhM_D13G0953.1,GhM_A03G1408.1,GhM_A11G0699.1,GhM_D02G1534.1,GhM_D11G0707.1 | 10 | 1 | Gossypium | Cotton | |||
| TA415:GhM_D08G1962.1,GhM_D08G1963.1,GhM_D08G1964.1,GhM_D08G1965.1 | AT3G57870 | AHUS5, EMB1637, SCE1, SCE1A, ATSCE1; SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | GO:0019789|SUMO ligase activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0016925|protein sumoylation | GhM_A08G2012.1,GhM_A11G2286.1,GhM_D05G2319.1,GhM_D10G0541.1,GhM_D11G2254.1,GhM_A05G2303.1 | 10 | 1 | Gossypium | Cotton | |||
| TA42:GhM_D02G0257.1,GhM_D02G0258.1,GhM_D02G0265.1,GhM_D02G0266.1,GhM_D02G0270.1,GhM_D02G0275.1,GhM_D02G0279.1,GhM_D02G0281.1,GhM_D02G0283.1,GhM_D02G0284.1 | AT1G74170||AT1G58190||AT1G07390||AT1G74180 | AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding||AtRLP1; protein binding||AtRLP14; AtRLP14 (Receptor Like Protein 14); protein binding||AtRLP13; AtRLP13 (Receptor Like Protein 13); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0007165|signal transduction;GO:0005575|cellular_component | - | 10 | 1 | Gossypium | Cotton | |||
| TA607:GhM_A12G1400.1,GhM_A12G1402.1,GhM_A12G1403.1 | AT5G24090 | acidic endochitinase (CHIB1) | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0009642|response to light intensity;GO:0042631|cellular response to water deprivation;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0009611|response to wounding;GO:0009651|response to salt stress;GO:0009409|response to cold | GhM_A04G0305.1,GhM_A08G1734.1,GhM_D12G1342.1,GhM_D12G1456.1,GhM_A12G1513.1,GhM_A03G0689.1,GhM_A13G1954.1 | 10 | 1 | Gossypium | Cotton | |||
| TA95:GhM_A04G1676.1,GhM_A04G1677.1,GhM_A04G1678.1,GhM_A04G1679.1,GhM_A04G1680.1,GhM_A04G1681.1,GhM_A04G1684.1,GhM_A04G1685.1 | AT1G58440||AT4G37760||AT2G22830 | SQE2; SQE2 (squalene epoxidase 2); FAD binding / oxidoreductase/ squalene monooxygenase||XF1, SQE1; XF1; squalene monooxygenase||SQE3; SQE3 (squalene epoxidase 3); squalene monooxygenase | GO:0012505|endomembrane system;GO:0004506|squalene monooxygenase activity;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus;GO:0016491|oxidoreductase activity;GO:0009414|response to water deprivation;GO:0050660|FAD binding;GO:0016021|integral to membrane;GO:0016126|sterol biosynthetic process | GhM_D04G2162.1,GhM_D01G1371.1 | 10 | 1 | Gossypium | Cotton | |||
| TA1043:GhM_A05G3740.1,GhM_A05G3741.1,GhM_A05G3742.1;TA3048:GhM_A04G0199.1,GhM_A04G0200.1 | AT5G42240||AT1G43780 | scpl44; scpl44 (serine carboxypeptidase-like 44); serine-type carboxypeptidase||scpl42; scpl42 (serine carboxypeptidase-like 42); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system;GO:0005618|cell wall | GhM_A04G0052.1,GhM_D05G4367.1,GhM_A07G1493.1,GhM_D05G3787.1,GhM_A07G1492.1 | 10 | 2 | Gossypium | Cotton | |||
| TA1163:GhM_A10G1238.1,GhM_A10G1242.1;TA2490:GhM_D10G1878.1,GhM_D10G1879.1 | AT4G13510||AT4G28700||AT1G64780 | AMT1;4; AMT1;4 (AMMONIUM TRANSPORTER 1;4); ammonium transmembrane transporter/ high affinity secondary active ammonium transmembrane transporter||ATAMT1;2, AMT1;2; ATAMT1;2 (AMMONIUM TRANSPORTER 1;2); ammonium transmembrane transporter||AMT1;1, ATAMT1, ATAMT1;1; AMT1;1 (AMMONIUM TRANSPORTER 1;1); ammonium transmembrane transporter | GO:0015398|high affinity secondary active ammonium transmembrane transporter activity;GO:0006810|transport;GO:0009624|response to nematode;GO:0005634|nucleus;GO:0015843|methylammonium transport;GO:0015696|ammonium transport;GO:0051258|protein polymerization;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008519|ammonium transmembrane transporter activity | GhM_A02G0496.1,GhM_A11G1579.1,GhM_A11G3065.1,GhM_D02G0490.1,GhM_D11G1574.1,GhM_D11G3001.1 | 10 | 2 | Gossypium | Cotton | |||
| TA1172:GhM_A10G1558.1,GhM_A10G1563.1;TA2480:GhM_D10G1546.1,GhM_D10G1548.1 | AT3G23810||AT4G13940 | SAHH2, ATSAHH2; SAHH2 (S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2); adenosylhomocysteinase/ binding / catalytic||HOG1, EMB1395, SAHH1, MEE58, ATSAHH1; MEE58 (MATERNAL EFFECT EMBRYO ARREST 58); adenosylhomocysteinase/ copper ion binding | GO:0005507|copper ion binding;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0004013|adenosylhomocysteinase activity;GO:0005488|binding;GO:0006730|one-carbon metabolic process;GO:0009793|embryonic development ending in seed dormancy;GO:0006346|methylation-dependent chromatin silencing;GO:0016441|posttranscriptional gene silencing;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A02G0219.1,GhM_A03G0860.1,GhM_A09G2503.1,GhM_D02G0216.1,GhM_D03G1249.1,GhM_D09G2386.1 | 10 | 2 | Gossypium | Cotton | |||
| TA1298:GhM_A11G3071.1,GhM_A11G3075.1;TA2150:GhM_A01G1376.1,GhM_A01G1379.1 | AT5G18480||AT3G14470||AT3G14460 | PGSIP6; PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0016020|membrane;GO:0005524|ATP binding | GhM_D13G2128.1,GhM_A13G2239.1,GhM_D11G3009.1,GhM_D11G3008.1,GhM_D11G3010.1,GhM_A11G3072.1 | 10 | 2 | Gossypium | Cotton | |||
| TA140:GhM_D01G0426.1,GhM_D01G0427.1,GhM_D01G0429.1,GhM_D01G0431.1,GhM_D01G0433.1,GhM_D01G0435.1;TA780:GhM_A01G0434.1,GhM_A01G0435.1,GhM_A01G0438.1 | AT1G61070||AT2G02130||AT2G02100||AT5G63660 | LCR74, PDF2.5; PDF2.5||LCR66, PDF2.4; LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)||LCR69, PDF2.2; LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase inhibitor||PDF2.3, LCR68; LCR68 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68); peptidase inhibitor | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0030414|peptidase inhibitor activity;GO:0006952|defense response;GO:0005886|plasma membrane | GhM_A01G0437.1 | 10 | 2 | Gossypium | Cotton | |||
| TA159:GhM_D10G2817.1,GhM_D10G2818.1,GhM_D10G2819.1,GhM_D10G2820.1,GhM_D10G2821.1,GhM_D10G2822.1;TA321:GhM_A10G2850.1,GhM_A10G2851.1,GhM_A10G2852.1,GhM_A10G2853.1 | AT3G46850||AT5G59190||AT4G00230 | XSP1; XSP1 (xylem serine peptidase 1); identical protein binding / serine-type endopeptidase||subtilase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0046686|response to cadmium ion;GO:0042802|identical protein binding;GO:0043086|negative regulation of catalytic activity;GO:0005618|cell wall;GO:0006508|proteolysis;GO:0005575|cellular_component | - | 10 | 2 | Gossypium | Cotton | |||
| TA1778:GhM_D03G1685.1,GhM_D03G1686.1;TA2969:GhM_A03G0443.1,GhM_A03G0444.1 | AT1G08090||AT5G60780||AT5G60770 | ATNRT2.4, NRT2.4; ATNRT2.4; nitrate transmembrane transporter||ATNRT2.3, NRT2.3; ATNRT2.3; nitrate transmembrane transporter||ATNRT2:1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1; ATNRT2:1 (NITRATE TRANSPORTER 2:1); nitrate transmembrane transporter | GO:0010167|response to nitrate;GO:0015112|nitrate transmembrane transporter activity;GO:0048527|lateral root development;GO:0015706|nitrate transport;GO:0016020|membrane | GhM_A08G2584.1,GhM_A05G1171.1,GhM_D05G1189.1,GhM_D09G1748.1,GhM_A09G1851.1,GhM_D08G2525.1 | 10 | 2 | Gossypium | Cotton | |||
| TA1814:GhM_D04G0736.1,GhM_D04G0743.1;TA3225:GhM_A05G4184.1,GhM_A05G4188.1 | AT3G55480 | adaptin family protein | GO:0006897|endocytosis;GO:0015031|protein transport;GO:0005794|Golgi apparatus;GO:0008565|protein transporter activity | GhM_A05G3449.1,GhM_D05G3418.1,GhM_D13G1592.1,GhM_D02G1291.1,GhM_A06G2477.1,GhM_A09G2199.1 | 10 | 2 | Gossypium | Cotton | |||
| TA191:GhM_A09G0177.1,GhM_A09G0178.1,GhM_A09G0179.1,GhM_A09G0180.1,GhM_A09G0181.1,GhM_A09G0184.1;TA424:GhM_D09G0173.1,GhM_D09G0174.1,GhM_D09G0175.1,GhM_D09G0180.1 | AT1G26800||AT3G13430 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | - | 10 | 2 | Gossypium | Cotton | |||
| TA193:GhM_A09G2885.1,GhM_A09G2886.1,GhM_A09G2887.1,GhM_A09G2888.1,GhM_A09G2889.1,GhM_A09G2890.1;TA1206:GhM_A10G2563.1,GhM_A10G2564.1 | AT5G27870||AT3G06830||AT5G49180||AT4G15980 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A05G3100.1,GhM_D05G3100.1 | 10 | 2 | Gossypium | Cotton | |||
| TA195:GhM_A10G0287.1,GhM_A10G0288.1,GhM_A10G0289.1,GhM_A10G0290.1,GhM_A10G0291.1;TA264:GhM_D10G0271.1,GhM_D10G0272.1,GhM_D10G0273.1,GhM_D10G0274.1,GhM_D10G0275.1 | AT4G28390||AT5G13490 | AAC3, ATAAC3; AAC3 (ADP/ATP CARRIER 3); ATP:ADP antiporter/ binding||AAC2; AAC2 (ADP/ATP carrier 2); ATP:ADP antiporter/ binding | GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005515|protein binding;GO:0005740|mitochondrial envelope;GO:0006810|transport;GO:0005488|binding;GO:0005739|mitochondrion;GO:0006839|mitochondrial transport;GO:0015865|purine nucleotide transport;GO:0005471|ATP:ADP antiporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | - | 10 | 2 | Gossypium | Cotton | |||
| TA2017:GhM_D06G0342.1,GhM_D06G0343.1;TA3270:GhM_A06G0329.1,GhM_A06G0330.1 | AT3G21175||AT4G24470 | ZML1, TIFY2B; ZML1 (ZIM-LIKE 1); sequence-specific DNA binding / transcription factor/ zinc ion binding||ZIM, TIFY1; TIFY1; transcription factor | GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0008270|zinc ion binding;GO:0007623|circadian rhythm | GhM_A01G1426.1,GhM_D01G1394.1,GhM_A02G0943.1,GhM_A05G2974.1,GhM_D05G2980.1,GhM_D02G0935.1 | 10 | 2 | Gossypium | Cotton | |||
| TA202:GhM_A11G1009.1,GhM_A11G1010.1,GhM_A11G1011.1,GhM_A11G1012.1,GhM_A11G1013.1;TA445:GhM_D11G1024.1,GhM_D11G1025.1,GhM_D11G1026.1,GhM_D11G1027.1 | AT5G23850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48980.1); Has 588 Blast hits to 567 proteins in 103 species: Archae - 2; Bacteria - 34; Metazoa - 301; Fungi - 69; Plants - 115; Viruses - 3; Other Eukaryotes - 64 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D12G1341.1 | 10 | 2 | Gossypium | Cotton | |||
| TA206:GhM_A11G2274.1,GhM_A11G2277.1,GhM_A11G2278.1,GhM_A11G2279.1,GhM_A11G2280.1;TA269:GhM_D11G2241.1,GhM_D11G2242.1,GhM_D11G2244.1,GhM_D11G2245.1,GhM_D11G2246.1 | AT3G50300||AT5G67150||AT3G50280||AT3G50270 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 10 | 2 | Gossypium | Cotton | |||
| TA216:GhM_A13G0167.1,GhM_A13G0169.1,GhM_A13G0171.1,GhM_A13G0172.1,GhM_A13G0173.1;TA1476:GhM_A13G0784.1,GhM_A13G0785.1 | AT1G06340 | agenet domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005575|cellular_component | GhM_D13G0602.1,GhM_D03G0528.1,GhM_A13G0795.1 | 10 | 2 | Gossypium | Cotton | |||
| TA2272:GhM_D07G2474.1,GhM_D07G2477.1;TA3408:GhM_A07G2574.1,GhM_A07G2577.1 | AT3G25100 | CDC45; CDC45 (cell division cycle 45) | GO:0006279|premeiotic DNA synthesis;GO:0005575|cellular_component;GO:0048229|gametophyte development;GO:0003674|molecular_function | GhM_D11G1627.1,GhM_D07G2475.1,GhM_A11G1639.1,GhM_A07G2575.1,GhM_A11G1640.1,GhM_D07G2476.1 | 10 | 2 | Gossypium | Cotton | |||
| TA2280:GhM_D07G2683.1,GhM_D07G2684.1;TA3592:GhM_A09G2993.1,GhM_A09G2995.1 | AT5G63320||AT1G78510 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal Domain protein 9); DNA binding (TAIR:AT5G14270.1); Has 44558 Blast hits to 24285 proteins in 1236 species: Archae - 185; Bacteria - 3450; Metazoa - 19774; Fungi - 4003; Plants - 1404; Viruses - 349; Other Eukaryotes - 15393 (source: NCBI BLink).||SPS1; SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase | GO:0005515|protein binding;GO:0006744|ubiquinone biosynthetic process;GO:0050347|trans-octaprenyltranstransferase activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0016564|transcription repressor activity;GO:0005783|endoplasmic reticulum | GhM_A03G0844.1,GhM_D13G2248.1,GhM_D03G1259.1,GhM_A11G3537.1,GhM_A13G2421.1,GhM_D05G2904.1 | 10 | 2 | Gossypium | Cotton | |||
| TA247:GhM_D07G1065.1,GhM_D07G1066.1,GhM_D07G1067.1,GhM_D07G1068.1,GhM_D07G1069.1;TA297:GhM_A07G1085.1,GhM_A07G1086.1,GhM_A07G1087.1,GhM_A07G1088.1,GhM_A07G1089.1 | AT3G07520||AT2G24710||AT5G48400 | ATGLR1.4, GLR1.4; GLR1.4 (GLUTAMATE RECEPTOR 1.4); cation channel/ intracellular ligand-gated ion channel||ATGLR2.3, GLR2.3; ATGLR2.3; intracellular ligand-gated ion channel||ATGLR1.2, GLR1.2; ATGLR1.2; intracellular ligand-gated ion channel | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0030003|cellular cation homeostasis;GO:0005261|cation channel activity;GO:0009416|response to light stimulus;GO:0005217|intracellular ligand-gated ion channel activity;GO:0006874|cellular calcium ion homeostasis;GO:0016020|membrane | - | 10 | 2 | Gossypium | Cotton | |||
| TA258:GhM_D09G1494.1,GhM_D09G1495.1,GhM_D09G1496.1,GhM_D09G1497.1,GhM_D09G1498.1;TA309:GhM_A09G1593.1,GhM_A09G1594.1,GhM_A09G1595.1,GhM_A09G1597.1,GhM_A09G1598.1 | AT5G06905||AT5G06900 | CYP712A2; CYP712A2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP93D1; CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 10 | 2 | Gossypium | Cotton | |||
| TA305:GhM_A09G0276.1,GhM_A09G0278.1,GhM_A09G0283.1,GhM_A09G0285.1,GhM_A09G0286.1;TA2369:GhM_D09G0257.1,GhM_D09G0258.1 | AT5G27530||AT1G70500||AT4G35670||AT5G39950 | polygalacturonase, putative / pectinase, putative||glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein||ATTRX2, ATH2, ATTRXH2, TRXH2; ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | GO:0012505|endomembrane system;GO:0004650|polygalacturonase activity;GO:0005975|carbohydrate metabolic process;GO:0006499|N-terminal protein myristoylation;GO:0005829|cytosol;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;GO:0005886|plasma membrane;GO:0000103|sulfate assimilation;GO:0005575|cellular_component | GhM_A05G4352.1,GhM_D04G0584.1,GhM_D09G0256.1 | 10 | 2 | Gossypium | Cotton | |||
| TA326:GhM_A11G0121.1,GhM_A11G0122.1,GhM_A11G0126.1,GhM_A11G0128.1;TA878:GhM_D11G0119.1,GhM_D11G0122.1,GhM_D11G0124.1 | AT4G33270||AT4G33260 | CDC20.2; CDC20.2; signal transducer||CDC20.1; CDC20.1; signal transducer | GO:0007165|signal transduction;GO:0005834|heterotrimeric G-protein complex;GO:0004871|signal transducer activity | GhM_A08G0978.1,GhM_A09G0525.1,GhM_D09G0550.1 | 10 | 2 | Gossypium | Cotton | |||
| TA355:GhM_D01G1128.1,GhM_D01G1130.1,GhM_D01G1131.1,GhM_D01G1132.1;TA402:GhM_A01G1155.1,GhM_A01G1157.1,GhM_A01G1158.1,GhM_A01G1159.1 | AT3G26040||AT1G24420 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_D01G1129.1,GhM_A11G3375.1 | 10 | 2 | Gossypium | Cotton | |||
| TA357:GhM_D01G2613.1,GhM_D01G2615.1,GhM_D01G2616.1,GhM_D01G2617.1;TA2191:GhM_A01G2685.1,GhM_A01G2686.1 | AT4G36810 | GGPS1; GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase | GO:0004311|farnesyltranstransferase activity;GO:0009507|chloroplast;GO:0008299|isoprenoid biosynthetic process;GO:0009513|etioplast | GhM_D11G2151.1,GhM_A11G2177.1,GhM_A11G0543.1,GhM_D11G0531.1 | 10 | 2 | Gossypium | Cotton | |||
| TA364:GhM_D02G1471.1,GhM_D02G1474.1,GhM_D02G1475.1,GhM_D02G1477.1;TA478:GhM_A03G1336.1,GhM_A03G1338.1,GhM_A03G1343.1,GhM_A03G1345.1 | AT1G69640||AT1G14290 | SBH1; SBH1 (SPHINGOID BASE HYDROXYLASE 1); catalytic/ sphingosine hydroxylase||SBH2; SBH2 (SPHINGOID BASE HYDROXYLASE 2); catalytic/ sphingosine hydroxylase | GO:0009640|photomorphogenesis;GO:0003824|catalytic activity;GO:0046520|sphingoid biosynthetic process;GO:0000170|sphingosine hydroxylase activity;GO:0005794|Golgi apparatus;GO:0005783|endoplasmic reticulum | GhM_A12G2127.1,GhM_D12G2033.1 | 10 | 2 | Gossypium | Cotton | |||
| TA381:GhM_D04G1946.1,GhM_D04G1947.1,GhM_D04G1949.1,GhM_D04G1950.1;TA489:GhM_A04G1457.1,GhM_A04G1458.1,GhM_A04G1460.1,GhM_A04G1461.1 | AT3G25190||AT1G76800||AT1G21140 | nodulin, putative | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0154.1,GhM_D01G0142.1 | 10 | 2 | Gossypium | Cotton | |||
| TA477:GhM_A03G0191.1,GhM_A03G0192.1,GhM_A03G0193.1,GhM_A03G0194.1;TA689:GhM_D03G1906.1,GhM_D03G1907.1,GhM_D03G1908.1 | - | - | - | GhM_A08G2261.1,GhM_D08G2214.1,GhM_D09G0268.1 | 10 | 2 | Gossypium | Cotton | |||
| TA492:GhM_A04G1894.1,GhM_A04G1895.1,GhM_A04G1896.1,GhM_A04G1897.1;TA715:GhM_D04G2366.1,GhM_D04G2367.1,GhM_D04G2368.1 | AT5G03490||AT1G51210 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A09G0009.1,GhM_D09G0005.1,GhM_D12G1955.1 | 10 | 2 | Gossypium | Cotton | |||
| TA594:GhM_A11G3817.1,GhM_A11G3818.1,GhM_A11G3819.1;TA901:GhM_D11G3734.1,GhM_D11G3735.1,GhM_D11G3736.1 | AT1G64950 | CYP89A5; CYP89A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | GhM_A02G1502.1,GhM_A08G2846.1,GhM_D03G0622.1,GhM_D08G2790.1 | 10 | 2 | Gossypium | Cotton | |||
| TA743:GhM_D05G4062.1,GhM_D05G4069.1,GhM_D05G4070.1;TA989:GhM_A04G0344.1,GhM_A04G0347.1,GhM_A04G0348.1 | AT3G15260||AT4G28400 | protein phosphatase 2C, putative / PP2C, putative | GO:0004722|protein serine/threonine phosphatase activity;GO:0003824|catalytic activity;GO:0005575|cellular_component | GhM_D05G4022.1,GhM_D01G0616.1,GhM_D04G1806.1,GhM_A04G1325.1 | 10 | 2 | Gossypium | Cotton | |||
| TA832:GhM_D08G2904.1,GhM_D08G2905.1,GhM_D08G2906.1;TA1106:GhM_A08G2967.1,GhM_A08G2968.1,GhM_A08G2969.1 | AT5G16940 | carbon-sulfur lyase | GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0016846|carbon-sulfur lyase activity | GhM_A04G1119.1,GhM_A10G2531.1,GhM_D04G1588.1,GhM_D06G1073.1 | 10 | 2 | Gossypium | Cotton | |||
| TA963:GhM_A02G1984.1,GhM_A02G1987.1,GhM_A02G1989.1;TA1731:GhM_D03G0278.1,GhM_D03G0279.1 | AT2G23140||AT5G67340 | armadillo/beta-catenin repeat family protein / U-box domain-containing protein||binding / ubiquitin-protein ligase | GO:0012505|endomembrane system;GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination | GhM_A11G2603.1,GhM_D11G2299.1,GhM_D12G1061.1,GhM_A12G0913.1,GhM_A02G1985.1 | 10 | 2 | Gossypium | Cotton | |||
| TA1696:GhM_D02G1929.1,GhM_D02G1930.1;TA2167:GhM_A01G2017.1,GhM_A01G2018.1;TA3014:GhM_A03G1872.1,GhM_A03G1873.1 | AT1G23460||AT1G10640||AT1G60590 | polygalacturonase||polygalacturonase, putative / pectinase, putative | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity;GO:0005575|cellular_component | GhM_D01G1928.1,GhM_D01G1930.1,GhM_A04G1784.1,GhM_D04G2260.1 | 10 | 3 | Gossypium | Cotton | |||
| TA2315:GhM_D08G1083.1,GhM_D08G1088.1;TA3454:GhM_A08G1111.1,GhM_A08G1115.1;TA3496:GhM_A08G3040.1,GhM_A08G3041.1 | AT4G28050||AT5G57810 | TET15; TET15 (TETRASPANIN15)||TET7; TET7 (TETRASPANIN7) | GO:0012505|endomembrane system;GO:0007568|aging;GO:0016021|integral to membrane;GO:0003674|molecular_function | GhM_A05G0084.1,GhM_D05G0088.1,GhM_D08G2971.1,GhM_D08G2972.1 | 10 | 3 | Gossypium | Cotton | |||
| TA375:GhM_D03G1957.1,GhM_D03G1958.1,GhM_D03G1965.1,GhM_D03G1970.1;TA2960:GhM_A03G0146.1,GhM_A03G0147.1;TA1789:GhM_D03G1964.1,GhM_D03G1966.1 | - | - | - | GhM_A03G0136.1,GhM_A03G0138.1 | 10 | 3 | Gossypium | Cotton | |||
| TA537:GhM_A10G0356.1,GhM_A10G0357.1,GhM_A10G0358.1;TA852:GhM_D10G0344.1,GhM_D10G0345.1,GhM_D10G0346.1;TA764:GhM_D06G1748.1,GhM_D06G1749.1,GhM_D06G1750.1 | AT5G45700||AT1G29780 | NLI interacting factor (NIF) family protein | GO:0016791|phosphatase activity;GO:0005739|mitochondrion | GhM_A06G1689.1 | 10 | 3 | Gossypium | Cotton | |||
| TA604:GhM_A12G1294.1,GhM_A12G1295.1,GhM_A12G1296.1;TA913:GhM_D12G1230.1,GhM_D12G1231.1,GhM_D12G1232.1;TA2324:GhM_D08G1817.1,GhM_D08G1818.1 | AT2G44840 | ATERF13, EREBP, ERF13; ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A08G1867.1,GhM_A08G1868.1 | 10 | 3 | Gossypium | Cotton | |||
| TA631:GhM_A13G1965.1,GhM_A13G1966.1,GhM_A13G1967.1;TA2822:GhM_D13G1863.1,GhM_D13G1864.1;TA1985:GhM_D05G4034.1,GhM_D05G4038.1 | AT3G23560||AT3G23550 | ALF5; ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter||MATE efflux family protein | GO:0015297|antiporter activity;GO:0009636|response to toxin;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A01G0655.1,GhM_D01G0621.1,GhM_A04G0332.1 | 10 | 3 | Gossypium | Cotton | |||
| TA633:GhM_A13G2084.1,GhM_A13G2085.1,GhM_A13G2087.1;TA2353:GhM_D08G2819.1,GhM_D08G2821.1;TA1105:GhM_A08G2874.1,GhM_A08G2875.1,GhM_A08G2876.1 | AT1G55290 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_D13G2649.1,GhM_A13G2758.1 | 10 | 3 | Gossypium | Cotton | |||
| TA801:GhM_D07G0325.1,GhM_D07G0328.1,GhM_D07G0329.1;TA3128:GhM_A05G0551.1,GhM_A05G0552.1;TA1067:GhM_A07G0327.1,GhM_A07G0329.1,GhM_A07G0330.1 | AT4G19820||AT4G19810||AT4G19750||AT4G23200 | glycosyl hydrolase family 18 protein||protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0003824|catalytic activity;GO:0004713|protein tyrosine kinase activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0004568|chitinase activity;GO:0005618|cell wall;GO:0005575|cellular_component;GO:0005773|vacuole;GO:0004674|protein serine/threonine kinase activity | GhM_D05G0575.1,GhM_D05G0576.1 | 10 | 3 | Gossypium | Cotton | |||
| TA938:GhM_D13G1004.1,GhM_D13G1005.1,GhM_D13G1007.1;TA1489:GhM_A13G1240.1,GhM_A13G1241.1;TA1690:GhM_D02G1588.1,GhM_D02G1589.1 | AT1G05260||AT3G01190 | peroxidase 27 (PER27) (P27) (PRXR7)||RCI3, RCI3A; RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase | GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0009409|response to cold;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0042538|hyperosmotic salinity response;GO:0005783|endoplasmic reticulum;GO:0009269|response to desiccation | GhM_A03G1470.1,GhM_A12G2023.1,GhM_D12G1931.1 | 10 | 3 | Gossypium | Cotton | |||
| TA1313:GhM_A11G3373.1,GhM_A11G3376.1;TA2638:GhM_D11G3285.1,GhM_D11G3288.1;TA2813:GhM_D13G1384.1,GhM_D13G1386.1;TA1497:GhM_A13G1503.1,GhM_A13G1504.1 | AT4G15920 | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3 and saliva related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), MtN3 and saliva related transmembrane protein (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 546 Blast hits to 527 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A13G2337.1,GhM_D13G2228.1 | 10 | 4 | Gossypium | Cotton | |||
| TA586:GhM_A11G3164.1,GhM_A11G3165.1,GhM_A11G3167.1;TA890:GhM_D11G3089.1,GhM_D11G3090.1,GhM_D11G3091.1;TA1525:GhM_A13G2263.1,GhM_A13G2266.1;TA2837:GhM_D13G2152.1,GhM_D13G2155.1 | AT3G23240 | ERF1, ATERF1; ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006952|defense response;GO:0009867|jasmonic acid mediated signaling pathway | - | 10 | 4 | Gossypium | Cotton | |||
| TA723:GhM_D05G1511.1,GhM_D05G1512.1,GhM_D05G1513.1;TA3151:GhM_A05G1499.1,GhM_A05G1500.1;TA1149:GhM_A10G0677.1,GhM_A10G0678.1;TA2458:GhM_D10G0648.1,GhM_D10G0652.1 | AT1G17710 | phosphatase | GO:0016791|phosphatase activity;GO:0008152|metabolic process | GhM_A10G0724.1 | 10 | 4 | Gossypium | Cotton | |||
| TA731:GhM_D05G2535.1,GhM_D05G2536.1,GhM_D05G2537.1;TA1027:GhM_A05G2524.1,GhM_A05G2525.1,GhM_A05G2526.1;TA2902:GhM_A02G0910.1,GhM_A02G0912.1;TA1675:GhM_D02G0907.1,GhM_D02G0909.1 | AT5G64260||AT4G08950 | EXO; EXO (EXORDIUM)||EXL2; EXL2 (EXORDIUM LIKE 2) | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0003674|molecular_function;GO:0009741|response to brassinosteroid stimulus;GO:0005618|cell wall | - | 10 | 4 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G0006.1,GhM_Scaf009G105.1,GhM_A08G0001.1,GhM_Scaf107G260.1,GhM_A01G2878.1,GhM_A08G0002.1,GhM_Scaf009G106.1,GhM_Scaf103G252.1,GhM_Scaf011G121.1 | 9 | 0 | Gossypium | Cotton | |||
| - | ATCG00180 | RPOC1; RNA polymerase beta' subunit-1 | GO:0009295|nucleoid | GhM_A01G0015.1,GhM_A05G3629.1,GhM_A06G1340.1,GhM_A12G1219.1,GhM_A06G1765.1,GhM_Scaf001G010.1,GhM_A13G2249.1,GhM_D13G2138.1,GhM_Scaf001G055.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G10950 | endomembrane protein 70, putative | GO:0016021|integral to membrane;GO:0016020|membrane;GO:0005794|Golgi apparatus | GhM_A01G0077.1,GhM_D01G0059.1,GhM_A04G1587.1,GhM_D04G2063.1,GhM_A12G0299.1,GhM_D12G0301.1,GhM_A13G0399.1,GhM_D13G0382.1,GhM_D10G1348.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G16785||AT3G05630 | PLDP2, PDLZ2, PLDZETA2; PLDP2; phospholipase D||PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1; PLDP1 (PHOSPHOLIPASE D P1); phospholipase D | GO:0048364|root development;GO:0016192|vesicle-mediated transport;GO:0009395|phospholipid catabolic process;GO:0009733|response to auxin stimulus;GO:0019375|galactolipid biosynthetic process;GO:0006995|cellular response to nitrogen starvation;GO:0004630|phospholipase D activity;GO:0016036|cellular response to phosphate starvation;GO:0005773|vacuole | GhM_A01G0302.1,GhM_D10G2038.1,GhM_A02G0574.1,GhM_D02G0561.1,GhM_A10G2100.1,GhM_D01G0279.1,GhM_D01G0278.1,GhM_A11G3388.1,GhM_D11G3299.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G15220 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0005819|spindle;GO:0005737|cytoplasm;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0645.1,GhM_D01G0612.1,GhM_A04G0358.1,GhM_D05G4011.1,GhM_A13G1970.1,GhM_D13G1868.1,GhM_D13G1869.1,GhM_A13G1971.1,GhM_D13G1870.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G53850 | haloacid dehalogenase-like hydrolase family protein | GO:0019509|L-methionine salvage from methylthioadenosine;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0008967|phosphoglycolate phosphatase activity;GO:0043874|acireductone synthase activity | GhM_A01G0659.1,GhM_D01G0624.1,GhM_A02G1207.1,GhM_A10G0856.1,GhM_D13G1860.1,GhM_A13G1962.1,GhM_A13G1977.1,GhM_D13G1876.1,GhM_A10G0857.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G54110||AT4G21450 | vesicle-associated membrane family protein / VAMP family protein||ATMAMI; ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0006970|response to osmotic stress | GhM_A01G0734.1,GhM_D01G0702.1,GhM_A10G0235.1,GhM_A05G1873.1,GhM_A06G1625.1,GhM_D06G1591.1,GhM_A13G0647.1,GhM_D13G0718.1,GhM_D10G0220.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G20290 | ATEHD1; ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding | GO:0005792|microsome;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0005509|calcium ion binding;GO:0005737|cytoplasm;GO:0005768|endosome;GO:0006897|endocytosis;GO:0016020|membrane | GhM_A01G0902.1,GhM_D01G0860.1,GhM_A10G0115.1,GhM_D10G0100.1,GhM_A11G3484.1,GhM_D11G3397.1,GhM_D11G2593.1,GhM_D07G1853.1,GhM_D02G1934.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G22340||AT1G62430 | ATCDS1; ATCDS1; phosphatidate cytidylyltransferase||phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative | GO:0012505|endomembrane system;GO:0008654|phospholipid biosynthetic process;GO:0004605|phosphatidate cytidylyltransferase activity;GO:0016020|membrane | GhM_A01G0908.1,GhM_D01G0866.1,GhM_A05G1959.1,GhM_D05G1969.1,GhM_A06G2640.1,GhM_D06G2627.1,GhM_A08G0329.1,GhM_A10G0107.1,GhM_D10G0091.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G55930||AT3G13070 | CBS domain-containing protein / transporter associated domain-containing protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A01G0947.1,GhM_D01G0904.1,GhM_A02G0818.1,GhM_D11G3385.1,GhM_A02G0929.1,GhM_A08G2287.1,GhM_A11G3472.1,GhM_A13G1822.1,GhM_D13G1703.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G19310||AT2G23780 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A01G1303.1,GhM_D01G1272.1,GhM_A06G0129.1,GhM_D06G0126.1,GhM_A12G0761.1,GhM_A02G2087.1,GhM_D03G0174.1,GhM_D12G0751.1,GhM_A11G2180.1 | 9 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G1338.1,GhM_D01G2182.1,GhM_A01G1649.1,GhM_Scaf292G390.1,GhM_A05G3245.1,GhM_A12G1166.1,GhM_A06G1619.1,GhM_D08G1317.1,GhM_A11G2657.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G24520||AT4G30210 | ATR2, AR2; ATR2 (ARABIDOPSIS P450 REDUCTASE 2); NADPH-hemoprotein reductase||ATR1, AR1; ATR1 (ARABIDOPSIS P450 REDUCTASE 1); NADPH-hemoprotein reductase | GO:0006979|response to oxidative stress;GO:0003958|NADPH-hemoprotein reductase activity;GO:0009507|chloroplast;GO:0009698|phenylpropanoid metabolic process;GO:0005783|endoplasmic reticulum | GhM_A01G1429.1,GhM_D01G1399.1,GhM_A05G0059.1,GhM_D05G0059.1,GhM_A08G0323.1,GhM_A05G2457.1,GhM_D05G2468.1,GhM_D08G0306.1,GhM_D11G0171.1 | 9 | 0 | Gossypium | Cotton | |||
| - | ATCG00160 | RPS2; Chloroplast ribosomal protein S2 | GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0003735|structural constituent of ribosome | GhM_A01G1446.1,GhM_A05G0943.1,GhM_A01G1540.1,GhM_D08G1214.1,GhM_A09G1339.1,GhM_D08G0828.1,GhM_D02G2388.1,GhM_Scaf220G350.1,GhM_D05G3511.1 | 9 | 0 | Gossypium | Cotton | |||
| - | ATCG00840 | RPL23.1, RPL23; One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex | GO:0000311|plastid large ribosomal subunit;GO:0009507|chloroplast;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A01G1653.1,GhM_A12G0958.1,GhM_A10G0926.1,GhM_Scaf005G079.1,GhM_D02G1382.1,GhM_D11G2396.1,GhM_D04G1003.1,GhM_D06G1288.1,GhM_D04G1181.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G01480||AT1G35510 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A01G1773.1,GhM_D01G1843.1,GhM_A03G1642.1,GhM_D02G1701.1,GhM_A12G1968.1,GhM_D12G1880.1,GhM_D13G1917.1,GhM_D02G0687.1,GhM_A02G0688.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G24764||AT1G68060||AT1G14840 | ATMAP70-4; ATMAP70-4 (microtubule-associated proteins 70-4); microtubule binding||ATMAP70-1; ATMAP70-1 (microtubule-associated proteins 70-1); microtubule binding||ATMAP70-2; ATMAP70-2 (microtubule-associated proteins 70-2); microtubule binding | GO:0008017|microtubule binding;GO:0010005|cortical microtubule, transverse to long axis;GO:0007010|cytoskeleton organization;GO:0005886|plasma membrane;GO:0005874|microtubule | GhM_A01G1847.1,GhM_D01G1766.1,GhM_A04G1872.1,GhM_D04G2343.1,GhM_A05G3578.1,GhM_D05G3539.1,GhM_A12G1982.1,GhM_D12G1892.1,GhM_D12G1893.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G46220 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1893.1,GhM_A11G2621.1,GhM_A04G0468.1,GhM_A08G0417.1,GhM_D08G0402.1,GhM_A08G0430.1,GhM_D08G0417.1,GhM_A13G1790.1,GhM_A13G0527.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G67330||AT1G27930 | unknown protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1995.1,GhM_D12G1863.1,GhM_A03G1698.1,GhM_D02G1774.1,GhM_A04G1825.1,GhM_D04G2303.1,GhM_A12G1948.1,GhM_D01G1896.1,GhM_D01G1895.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G06240 | emb2735; emb2735 (embryo defective 2735) | GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2095.1,GhM_A09G1781.1,GhM_A01G2210.1,GhM_A10G1183.1,GhM_A13G2013.1,GhM_D09G1620.1,GhM_A12G0920.1,GhM_D01G2063.1,GhM_D04G0007.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G77840||AT1G36730 | eukaryotic translation initiation factor 5, putative / eIF-5, putative | GO:0006446|regulation of translational initiation;GO:0005488|binding;GO:0006413|translational initiation;GO:0003743|translation initiation factor activity | GhM_A01G2341.1,GhM_D01G2288.1,GhM_A05G2588.1,GhM_A06G0473.1,GhM_D06G0491.1,GhM_D05G2601.1,GhM_A07G0901.1,GhM_D07G0905.1,GhM_D05G2600.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G42520||AT3G58570 | DEAD box RNA helicase, putative | GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A01G2472.1,GhM_D01G2411.1,GhM_A04G0628.1,GhM_D04G1167.1,GhM_A11G3955.1,GhM_A13G2760.1,GhM_D13G2652.1,GhM_D08G3005.1,GhM_A08G3073.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G03760||AT5G22740 | ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4; ATCSLA09; mannan synthase/ transferase, transferring glycosyl groups||ATCSLA02, CSLA02, ATCSLA2; ATCSLA02; mannan synthase/ transferase, transferring glycosyl groups | GO:0008150|biological_process;GO:0009617|response to bacterium;GO:0009294|DNA mediated transformation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0051753|mannan synthase activity;GO:0005575|cellular_component | GhM_A01G2607.1,GhM_D01G2535.1,GhM_A05G3282.1,GhM_D05G3267.1,GhM_A08G0092.1,GhM_D08G0076.1,GhM_A09G1230.1,GhM_D09G1161.1,GhM_D10G2445.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G36840 | ACT domain-containing protein | GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0016597|amino acid binding | GhM_A01G2639.1,GhM_D01G2565.1,GhM_A04G0935.1,GhM_D04G1389.1,GhM_A09G1822.1,GhM_D09G1715.1,GhM_D09G1714.1,GhM_A10G2561.1,GhM_D10G2477.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G05520||AT3G23660 | transport protein, putative | GO:0005515|protein binding;GO:0006810|transport;GO:0006886|intracellular protein transport;GO:0005215|transporter activity;GO:0030127|COPII vesicle coat;GO:0008270|zinc ion binding;GO:0006888|ER to Golgi vesicle-mediated transport | GhM_A02G0183.1,GhM_D02G0192.1,GhM_A03G1255.1,GhM_D02G1322.1,GhM_A09G2519.1,GhM_D09G2402.1,GhM_A10G1608.1,GhM_D10G1503.1,GhM_A10G1609.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G65660||AT3G45950 | splicing factor-related||SMP1; SMP1 (SWELLMAP 1); nucleic acid binding / single-stranded RNA binding | GO:0008150|biological_process;GO:0008284|positive regulation of cell proliferation;GO:0008380|RNA splicing;GO:0003676|nucleic acid binding;GO:0003727|single-stranded RNA binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A02G0318.1,GhM_A02G0444.1,GhM_D02G0439.1,GhM_A10G1315.1,GhM_D10G1821.1,GhM_A10G1316.1,GhM_D01G1452.1,GhM_D02G0340.1,GhM_D02G0339.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G22810||AT4G14710||AT3G63300 | phosphoinositide binding||ATARD2; acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | GO:0019509|L-methionine salvage from methylthioadenosine;GO:0035091|phosphoinositide binding;GO:0010309|acireductone dioxygenase [iron(II)-requiring] activity;GO:0007165|signal transduction;GO:0046872|metal ion binding;GO:0005575|cellular_component | GhM_A02G0371.1,GhM_D02G0392.1,GhM_A02G0372.1,GhM_A09G2685.1,GhM_D09G2563.1,GhM_D08G0777.1,GhM_A08G0816.1,GhM_A12G0031.1,GhM_D12G0030.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G04270 | RPS15; RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane | GhM_A02G0386.1,GhM_A09G2732.1,GhM_A07G2701.1,GhM_A10G1354.1,GhM_D02G0405.1,GhM_D10G1739.1,GhM_D09G2608.1,GhM_D11G1491.1,GhM_D07G2598.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G59520 | CW7; CW7 | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0532.1,GhM_A03G0655.1,GhM_D06G0266.1,GhM_A05G2381.1,GhM_D05G2394.1,GhM_D06G0308.1,GhM_A06G0266.1,GhM_D06G0307.1,GhM_A10G1916.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G36370||AT1G22020 | SHM6; SHM6 (serine hydroxymethyltransferase 6); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding||SHM7; SHM7 (serine hydroxymethyltransferase 7); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding | GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0030170|pyridoxal phosphate binding;GO:0004372|glycine hydroxymethyltransferase activity;GO:0005575|cellular_component;GO:0006563|L-serine metabolic process;GO:0006544|glycine metabolic process | GhM_A02G0887.1,GhM_D02G0884.1,GhM_A05G2583.1,GhM_A03G2526.1,GhM_D02G2549.1,GhM_A04G1588.1,GhM_D05G2597.1,GhM_D12G2474.1,GhM_D06G1270.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G25690 | CHUP1; CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) | GO:0009902|chloroplast relocation;GO:0009507|chloroplast;GO:0009707|chloroplast outer membrane | GhM_A02G1498.1,GhM_D04G2214.1,GhM_A04G0947.1,GhM_D06G1151.1,GhM_A06G2083.1,GhM_D10G2130.1,GhM_D10G2471.1,GhM_A12G2188.1,GhM_D12G2093.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G80000 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G15280.2); Has 2243 Blast hits to 1704 proteins in 212 species: Archae - 16; Bacteria - 151; Metazoa - 691; Fungi - 281; Plants - 163; Viruses - 64; Other Eukaryotes - 877 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1601.1,GhM_D03G0814.1,GhM_A05G1412.1,GhM_D05G1425.1,GhM_D10G0759.1,GhM_A10G0881.1,GhM_D09G1058.1,GhM_A09G1132.1,GhM_D05G1426.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G08170 | inositol 1,3,4-trisphosphate 5/6-kinase family protein | GO:0000287|magnesium ion binding;GO:0003824|catalytic activity;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0035300|inositol-1,3,4-trisphosphate 5/6-kinase activity;GO:0005737|cytoplasm;GO:0047325|inositol tetrakisphosphate 1-kinase activity;GO:0005524|ATP binding | GhM_A02G1794.1,GhM_D02G2408.1,GhM_A03G2391.1,GhM_D05G2418.1,GhM_A05G2405.1,GhM_A06G0293.1,GhM_D06G0294.1,GhM_D05G2967.1,GhM_A05G2957.1 | 9 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1820.1,GhM_A04G0695.1,GhM_D01G2183.1,GhM_A05G3246.1,GhM_D04G0632.1,GhM_D06G1325.1,GhM_A05G4373.1,GhM_D11G1840.1,GhM_A12G2022.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G65470||AT4G24530 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1881.1,GhM_D03G0381.1,GhM_A05G2459.1,GhM_D05G2470.1,GhM_A11G2444.1,GhM_D11G2440.1,GhM_A12G1184.1,GhM_D12G0893.1,GhM_D12G0894.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G37640||AT1G27770 | ACA1, PEA1; ACA1 (AUTO-INHIBITED CA2+-ATPASE 1); calcium channel/ calcium-transporting ATPase/ calmodulin binding||ACA2; ACA2 (CALCIUM ATPASE 2); calcium ion transmembrane transporter/ calcium-transporting ATPase/ calmodulin binding | GO:0008152|metabolic process;GO:0015085|calcium ion transmembrane transporter activity;GO:0005789|endoplasmic reticulum membrane;GO:0006810|transport;GO:0006754|ATP biosynthetic process;GO:0005516|calmodulin binding;GO:0005388|calcium-transporting ATPase activity;GO:0006812|cation transport;GO:0006816|calcium ion transport;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | GhM_A02G1968.1,GhM_D03G0295.1,GhM_A06G0249.1,GhM_D06G0252.1,GhM_A07G1556.1,GhM_D10G1062.1,GhM_A07G1557.1,GhM_A10G1024.1,GhM_A10G1025.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G33985||AT3G50350 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A02G2023.1,GhM_D03G0244.1,GhM_A12G0841.1,GhM_A10G1044.1,GhM_D10G1042.1,GhM_A11G2248.1,GhM_D11G2218.1,GhM_D12G1097.1,GhM_D08G1573.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G17910 | transferase, transferring acyl groups | GO:0016746|transferase activity, transferring acyl groups;GO:0006506|GPI anchor biosynthetic process;GO:0016021|integral to membrane;GO:0005789|endoplasmic reticulum membrane | GhM_A03G0058.1,GhM_D03G2045.1,GhM_A03G1682.1,GhM_A09G0420.1,GhM_A06G1567.1,GhM_A05G3211.1,GhM_A04G0850.1,GhM_A05G3220.1,GhM_A12G0844.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G47010 | UPF1, LBA1, ATUPF1; LBA1 (LOW-LEVEL BETA-AMYLASE 1); ATP binding / DNA binding / RNA helicase/ hydrolase | GO:0000184|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0016787|hydrolase activity;GO:0009744|response to sucrose stimulus;GO:0010182|sugar mediated signaling pathway;GO:0003677|DNA binding;GO:0003724|RNA helicase activity;GO:0005886|plasma membrane;GO:0016246|RNA interference;GO:0005524|ATP binding | GhM_A03G0093.1,GhM_D03G2007.1,GhM_A08G2119.1,GhM_D08G2074.1,GhM_A09G2404.1,GhM_D09G2295.1,GhM_D09G2292.1,GhM_D09G2293.1,GhM_D09G2294.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G17140 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1924 Blast hits to 1182 proteins in 161 species: Archae - 0; Bacteria - 16; Metazoa - 911; Fungi - 304; Plants - 271; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A03G0097.1,GhM_D03G2003.1,GhM_A08G2131.1,GhM_A03G0098.1,GhM_D03G2002.1,GhM_A08G2132.1,GhM_D08G2087.1,GhM_D08G2085.1,GhM_D08G2086.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G17570 | zinc finger (GATA type) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G0115.1,GhM_D03G1986.1,GhM_A08G2162.1,GhM_D08G2116.1,GhM_A09G2393.1,GhM_D12G2572.1,GhM_A12G2684.1,GhM_D09G2282.1,GhM_D09G2281.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G23030 | MATE efflux protein-related | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A03G0250.1,GhM_D03G1864.1,GhM_A08G2338.1,GhM_D12G3079.1,GhM_A09G0578.1,GhM_D09G0502.1,GhM_A11G0105.1,GhM_D11G0108.1,GhM_A12G3192.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G28840 | ankyrin repeat family protein | GO:0012505|endomembrane system | GhM_A03G0578.1,GhM_D03G1542.1,GhM_A05G1055.1,GhM_A04G0730.1,GhM_A06G1867.1,GhM_A13G0117.1,GhM_A07G1182.1,GhM_D07G1165.1,GhM_D05G1068.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G54140 | ATPTR1, PTR1; PTR1 (PEPTIDE TRANSPORTER 1); dipeptide transporter/ transporter/ tripeptide transporter | GO:0006807|nitrogen compound metabolic process;GO:0042937|tripeptide transporter activity;GO:0042936|dipeptide transporter activity;GO:0042939|tripeptide transport;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity;GO:0042938|dipeptide transport | GhM_A03G0664.1,GhM_D03G1442.1,GhM_A05G0993.1,GhM_D05G1010.1,GhM_A08G0080.1,GhM_D08G0065.1,GhM_A09G2020.1,GhM_D09G1922.1,GhM_D01G2713.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G24310||AT3G49290||AT5G24300 | SSI1, SSI, ATSS1; SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1); starch synthase/ transferase, transferring glycosyl groups||ABIL3; ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)||ABIL2; ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2) | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0010021|amylopectin biosynthetic process;GO:0009011|starch synthase activity;GO:0009570|chloroplast stroma;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A03G0706.1,GhM_D03G1405.1,GhM_D12G2947.1,GhM_A12G3063.1,GhM_D09G2150.1,GhM_A09G2242.1,GhM_A05G4922.1,GhM_D04G0026.1,GhM_D09G2149.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G63450||AT3G01900 | CYP94B2; CYP94B2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP94B1; CYP94B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A03G0714.1,GhM_D03G1395.1,GhM_A09G0489.1,GhM_D09G0446.1,GhM_A05G4023.1,GhM_D04G0913.1,GhM_A09G0490.1,GhM_A11G0452.1,GhM_D11G0433.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G41040||AT3G48720 | transferase family protein | GO:0008150|biological_process;GO:0052325|cell wall pectin biosynthetic process;GO:0010345|suberin biosynthetic process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0016740|transferase activity;GO:0005575|cellular_component;GO:0050734|hydroxycinnamoyltransferase activity | GhM_A03G0732.1,GhM_A07G0601.1,GhM_D03G1375.1,GhM_D03G1374.1,GhM_A05G3996.1,GhM_D04G0886.1,GhM_A07G2969.1,GhM_D10G0862.1,GhM_A10G0783.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G62890||AT1G60030 | permease, putative||ATNAT7, NAT7; xanthine/uracil permease family protein | GO:0006810|transport;GO:0005618|cell wall;GO:0022857|transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A03G0837.1,GhM_D12G3256.1,GhM_A03G1917.1,GhM_D02G1971.1,GhM_A04G1770.1,GhM_D04G2246.1,GhM_A12G3370.1,GhM_D03G1265.1,GhM_D03G1266.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G62620||AT1G27120 | galactosyltransferase family protein | GO:0012505|endomembrane system;GO:0016757|transferase activity, transferring glycosyl groups;GO:0009507|chloroplast;GO:0005529|sugar binding;GO:0016758|transferase activity, transferring hexosyl groups;GO:0006486|protein amino acid glycosylation;GO:0008378|galactosyltransferase activity;GO:0016020|membrane | GhM_A03G1017.1,GhM_D03G1094.1,GhM_A03G1962.1,GhM_D02G2001.1,GhM_A03G1961.1,GhM_A04G1258.1,GhM_D04G1740.1,GhM_A07G0844.1,GhM_D07G0842.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G39090||AT4G16190 | RD19, RD19A; RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase||cysteine proteinase, putative | GO:0005634|nucleus;GO:0006970|response to osmotic stress;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0006508|proteolysis;GO:0042742|defense response to bacterium;GO:0005773|vacuole;GO:0009269|response to desiccation | GhM_A03G1061.1,GhM_D02G1077.1,GhM_A03G2577.1,GhM_D02G2603.1,GhM_A13G0348.1,GhM_D13G0334.1,GhM_D05G2134.1,GhM_A05G2114.1,GhM_D07G0292.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G69850 | ATNRT1:2, NTL1; ATNRT1:2 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1:2); calcium ion binding / transporter | GO:0009624|response to nematode;GO:0005509|calcium ion binding;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A03G1351.1,GhM_D02G1340.1,GhM_A12G2145.1,GhM_D12G2053.1,GhM_A12G2146.1,GhM_D13G0762.1,GhM_A12G2229.1,GhM_D12G2134.1,GhM_A13G0577.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G68160||AT1G60670 | unknown protein||INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10820.2); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_A03G1484.1,GhM_D02G1599.1,GhM_D13G0281.1,GhM_A04G1883.1,GhM_D04G2356.1,GhM_Scaf079G233.1,GhM_A13G0294.1,GhM_A12G2013.1,GhM_D12G1922.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G27290||AT1G55980||AT1G56000||AT5G20990 | unknown protein||B73, SIR4, CNX, CHL6, CNX1; B73; molybdenum ion binding||electron carrier/ oxidoreductase||amine oxidase-related | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016491|oxidoreductase activity;GO:0009734|auxin mediated signaling pathway;GO:0006777|Mo-molybdopterin cofactor biosynthetic process;GO:0005575|cellular_component;GO:0030151|molybdenum ion binding;GO:0009055|electron carrier activity | GhM_A03G1537.1,GhM_D02G1755.1,GhM_D13G1838.1,GhM_D10G1907.1,GhM_A13G2062.1,GhM_D13G1952.1,GhM_D07G2058.1,GhM_D12G1868.1,GhM_A12G1952.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G67580 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G1727.1,GhM_D02G1813.1,GhM_A04G1813.1,GhM_D04G2287.1,GhM_D12G2287.1,GhM_A12G2391.1,GhM_A07G0647.1,GhM_D07G0641.1,GhM_D12G2286.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G26000 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1746.1,GhM_D02G1832.1,GhM_A04G1809.1,GhM_D04G2283.1,GhM_D08G1005.1,GhM_D03G0449.1,GhM_D12G1847.1,GhM_A12G1921.1,GhM_D10G1022.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G23860 | SRZ-21, SRZ21, RSZP21; RSZP21 (RS-CONTAINING ZINC FINGER PROTEIN 21); protein binding | GO:0005634|nucleus;GO:0005515|protein binding;GO:0000398|nuclear mRNA splicing, via spliceosome;GO:0016607|nuclear speck | GhM_A03G1904.1,GhM_D02G1955.1,GhM_D01G1706.1,GhM_D05G0709.1,GhM_A05G0689.1,GhM_A06G1294.1,GhM_D06G1303.1,GhM_A13G2400.1,GhM_D13G2298.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G06590 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G2170.1,GhM_D09G1561.1,GhM_A05G4186.1,GhM_A07G0684.1,GhM_A09G1662.1,GhM_A08G1381.1,GhM_D06G0115.1,GhM_A12G3039.1,GhM_D06G1594.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G38220 | aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative | GO:0010043|response to zinc ion;GO:0016787|hydrolase activity;GO:0004046|aminoacylase activity;GO:0046983|protein dimerization activity;GO:0005773|vacuole | GhM_A03G2254.1,GhM_D02G2282.1,GhM_A04G1444.1,GhM_D04G1933.1,GhM_A09G0003.1,GhM_A13G0756.1,GhM_A08G0066.1,GhM_D13G0628.1,GhM_D09G0823.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G54570||AT3G05060||AT5G27120 | esterase/lipase/thioesterase family protein||SAR DNA-binding protein, putative | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0010287|plastoglobule;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0016020|membrane | GhM_A03G2496.1,GhM_D02G2519.1,GhM_A08G2743.1,GhM_D08G2685.1,GhM_A08G2742.1,GhM_A11G3232.1,GhM_D11G3154.1,GhM_A13G2299.1,GhM_D13G2186.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G26840 | SUM1, SUMO 1, SUMO1, ATSUMO1; SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag | GO:0005515|protein binding;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0009408|response to heat;GO:0031386|protein tag;GO:0016925|protein sumoylation | GhM_A04G0121.1,GhM_D05G4284.1,GhM_A07G1007.1,GhM_D07G0998.1,GhM_A07G2405.1,GhM_D07G2319.1,GhM_A08G0613.1,GhM_D08G0583.1,GhM_D13G1743.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G09770||AT3G06140 | zinc finger (C3HC4-type RING finger) family protein | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0006499|N-terminal protein myristoylation | GhM_A04G0980.1,GhM_D04G1437.1,GhM_A09G1877.1,GhM_D09G1774.1,GhM_A09G1878.1,GhM_A09G0785.1,GhM_D09G0726.1,GhM_A11G4073.1,GhM_D11G3970.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G02580||AT3G55240 | unknown protein||Overexpression leads to PEL (Pseudo-Etiolation in Light) phenotype. | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0032502|developmental process;GO:0003674|molecular_function;GO:0005575|cellular_component | GhM_A04G1043.1,GhM_A11G4088.1,GhM_D11G3983.1,GhM_A13G1313.1,GhM_A06G2194.1,GhM_D06G2174.1,GhM_A09G1974.1,GhM_D09G1872.1,GhM_D13G1184.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G02000 | ROXY1; ROXY1; disulfide oxidoreductase | GO:0015036|disulfide oxidoreductase activity;GO:0005634|nucleus;GO:0006467|protein thiol-disulfide exchange;GO:0048653|anther development;GO:0005737|cytoplasm;GO:0048441|petal development;GO:0016481|negative regulation of transcription;GO:0048455|stamen formation;GO:0048448|stamen morphogenesis;GO:0048453|sepal formation;GO:0048451|petal formation | GhM_A04G1294.1,GhM_D04G1776.1,GhM_A05G3994.1,GhM_D04G0884.1,GhM_A07G2964.1,GhM_D07G2868.1,GhM_A12G1847.1,GhM_D12G1780.1,GhM_D02G2060.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G25350||AT2G25490 | EBF1, FBL6; EBF1 (EIN3-BINDING F BOX PROTEIN 1); protein binding / ubiquitin-protein ligase||EBF2; EBF2 (EIN3-BINDING F BOX PROTEIN 2); protein binding | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0004842|ubiquitin-protein ligase activity;GO:0009723|response to ethylene stimulus | GhM_A05G0170.1,GhM_D05G0180.1,GhM_A07G0459.1,GhM_D07G0456.1,GhM_A08G3070.1,GhM_D08G3000.1,GhM_A09G1383.1,GhM_D09G1301.1,GhM_D07G0457.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G26640||AT5G43760 | KCS20; KCS20 (3-KETOACYL-COA SYNTHASE 20); fatty acid elongase||KCS11; KCS11 (3-KETOACYL-COA SYNTHASE 11); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0003824|catalytic activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0009416|response to light stimulus;GO:0008415|acyltransferase activity;GO:0016020|membrane;GO:0009922|fatty acid elongase activity;GO:0009409|response to cold | GhM_A05G0214.1,GhM_D05G0218.1,GhM_A06G0693.1,GhM_D06G0699.1,GhM_A09G2715.1,GhM_D09G2594.1,GhM_A10G1441.1,GhM_D10G1680.1,GhM_D08G3017.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G64440 | AtFAAH; AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase); N-(long-chain-acyl)ethanolamine deacylase/ amidase | GO:0047412|N-(long-chain-acyl)ethanolamine deacylase activity;GO:0004040|amidase activity;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0042742|defense response to bacterium;GO:0005773|vacuole | GhM_A05G0220.1,GhM_D05G0225.1,GhM_D13G0523.1,GhM_A12G0191.1,GhM_D12G0198.1,GhM_A13G0540.1,GhM_D01G1901.1,GhM_D05G1289.1,GhM_D07G2031.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G19390 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0341.1,GhM_D05G0359.1,GhM_A06G0882.1,GhM_A05G0342.1,GhM_D05G0360.1,GhM_A07G0153.1,GhM_D07G0152.1,GhM_D05G0001.1,GhM_D06G0888.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G32060 | 40S ribosomal protein S12 (RPS12C) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005634|nucleus;GO:0003735|structural constituent of ribosome;GO:0006412|translation | GhM_A05G0566.1,GhM_D05G0588.1,GhM_A06G1164.1,GhM_D06G1195.1,GhM_A08G3212.1,GhM_A13G2449.1,GhM_D13G2347.1,GhM_D08G3145.1,GhM_D09G2877.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G30960 | CIPK6, SIP3, SNRK3.14, ATCIPK6; SIP3 (SOS3-INTERACTING PROTEIN 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0007275|multicellular organismal development;GO:0009628|response to abiotic stimulus;GO:0005524|ATP binding;GO:0010540|basipetal auxin transport;GO:0009651|response to salt stress;GO:0042538|hyperosmotic salinity response;GO:0009414|response to water deprivation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0570.1,GhM_D05G0593.1,GhM_A06G1167.1,GhM_D06G1197.1,GhM_A07G0348.1,GhM_D07G0348.1,GhM_A13G2447.1,GhM_D13G2345.1,GhM_D11G2532.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G24230 | leucine-rich repeat transmembrane protein kinase, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0574.1,GhM_D05G0597.1,GhM_A06G1171.1,GhM_D06G1203.1,GhM_A07G0350.1,GhM_D07G0349.1,GhM_A07G0349.1,GhM_D13G2340.1,GhM_A13G2443.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G24870 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A05G0702.1,GhM_D05G0723.1,GhM_A07G0020.1,GhM_D07G0024.1,GhM_D06G1327.1,GhM_A06G1500.1,GhM_D10G1486.1,GhM_A07G1471.1,GhM_D08G0312.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G51130||AT2G44900||AT3G20760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20760.1); Has 200 Blast hits to 198 proteins in 89 species: Archae - 0; Bacteria - 0; Metazoa - 63; Fungi - 88; Plants - 37; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).||armadillo/beta-catenin repeat family protein / F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, cotyledon; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51130.1); Has 190 Blast hits to 190 proteins in 77 species: Archae - 0; Bacteria - 4; Metazoa - 67; Fungi - 72; Plants - 37; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | GO:0008150|biological_process;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0003674|molecular_function;GO:0005488|binding;GO:0005634|nucleus;GO:0048527|lateral root development;GO:0004842|ubiquitin-protein ligase activity;GO:0005575|cellular_component | GhM_A05G0727.1,GhM_D05G0750.1,GhM_D02G1486.1,GhM_D01G2213.1,GhM_D07G1594.1,GhM_D03G1095.1,GhM_D11G2491.1,GhM_D07G1593.1,GhM_D07G1818.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G02850||AT5G12110||AT1G30230 | elongation factor 1B alpha-subunit 1 (eEF1Balpha1)||elongation factor 1-beta / EF-1-beta||BGLU11; BGLU11 (BETA GLUCOSIDASE 11); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0006414|translational elongation;GO:0003824|catalytic activity;GO:0003746|translation elongation factor activity;GO:0005975|carbohydrate metabolic process;GO:0046686|response to cadmium ion;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0005853|eukaryotic translation elongation factor 1 complex;GO:0005886|plasma membrane | GhM_A05G0792.1,GhM_D05G0817.1,GhM_A13G2841.1,GhM_D13G2722.1,GhM_D05G0816.1,GhM_A08G2499.1,GhM_D08G2442.1,GhM_A12G2398.1,GhM_D12G2292.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G27460 | sec23/sec24 transport family protein | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0006886|intracellular protein transport;GO:0005215|transporter activity;GO:0030127|COPII vesicle coat;GO:0008270|zinc ion binding;GO:0006888|ER to Golgi vesicle-mediated transport | GhM_A05G0891.1,GhM_D08G0096.1,GhM_A05G0892.1,GhM_A08G0110.1,GhM_D05G0910.1,GhM_D06G1648.1,GhM_D05G3454.1,GhM_D11G2427.1,GhM_D06G0933.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G45630||AT5G60170 | RNA recognition motif (RRM)-containing protein||RNA binding / nucleic acid binding / nucleotide binding / protein binding / zinc ion binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A05G1105.1,GhM_D05G1122.1,GhM_A13G2938.1,GhM_A08G0028.1,GhM_A07G1126.1,GhM_D07G1107.1,GhM_D05G1121.1,GhM_D08G0022.1,GhM_D13G2840.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT1G66950||AT2G36380 | PDR11, ATPDR11; PDR11 (PLEIOTROPIC DRUG RESISTANCE 11); ATPase, coupled to transmembrane movement of substances||PDR6, ATPDR6; PDR6; ATPase, coupled to transmembrane movement of substances | GO:0016020|membrane;GO:0006810|transport | GhM_A05G1280.1,GhM_D05G1297.1,GhM_A05G3274.1,GhM_D04G0234.1,GhM_A05G4706.1,GhM_D05G3257.1,GhM_A09G1736.1,GhM_D09G1665.1,GhM_D05G3256.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G15890||AT1G52540||AT1G70460 | protein kinase, putative||protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G1362.1,GhM_D05G1375.1,GhM_A05G4107.1,GhM_D04G0998.1,GhM_A08G1187.1,GhM_A05G4106.1,GhM_D08G1056.1,GhM_A06G2409.1,GhM_D06G2410.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G23090 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G2345.1,GhM_D05G2359.1,GhM_A06G0241.1,GhM_D02G2444.1,GhM_A12G0902.1,GhM_D12G1054.1,GhM_A13G0496.1,GhM_D13G0485.1,GhM_D06G0244.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G04250 | OTU-like cysteine protease family protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A05G3353.1,GhM_D05G3326.1,GhM_A05G4884.1,GhM_D04G0064.1,GhM_D05G3192.1,GhM_D09G0635.1,GhM_D10G1141.1,GhM_D08G1911.1,GhM_D07G1284.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G14030 | translocon-associated protein beta (TRAPB) family protein | GO:0005886|plasma membrane | GhM_A05G3979.1,GhM_D04G0871.1,GhM_A07G2954.1,GhM_D07G2856.1,GhM_A09G0018.1,GhM_D09G0009.1,GhM_A10G0788.1,GhM_D10G0854.1,GhM_D02G1678.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G01990||AT1G69040 | ACR6; ACR6; amino acid binding||ACR4; ACR4 (ACT REPEAT 4); amino acid binding | GO:0008152|metabolic process;GO:0009735|response to cytokinin stimulus;GO:0005829|cytosol;GO:0016597|amino acid binding;GO:0006521|regulation of cellular amino acid metabolic process | GhM_A05G3998.1,GhM_D04G0888.1,GhM_A09G0611.1,GhM_D09G0475.1,GhM_D03G1910.1,GhM_D06G1988.1,GhM_D01G0893.1,GhM_D09G0543.1,GhM_D12G0976.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G39850 | 40S ribosomal protein S9 (RPS9C) | GO:0016020|membrane | GhM_A05G4362.1,GhM_A11G0392.1,GhM_A09G0238.1,GhM_A10G1138.1,GhM_D04G0575.1,GhM_D07G2545.1,GhM_D11G0373.1,GhM_D09G0219.1,GhM_D10G0956.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G59650 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A05G4392.1,GhM_A10G1783.1,GhM_D10G1355.1,GhM_D02G1596.1,GhM_D10G0796.1,GhM_D04G0551.1,GhM_D08G0830.1,GhM_D05G1700.1,GhM_D08G2571.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G15000 | 60S ribosomal protein L27 (RPL27C) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005622|intracellular;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A05G4602.1,GhM_D04G0348.1,GhM_A07G0988.1,GhM_D07G0979.1,GhM_A07G2354.1,GhM_D07G2287.1,GhM_A08G0661.1,GhM_A11G1832.1,GhM_D11G1825.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G54130||AT1G02270 | endonuclease/exonuclease/phosphatase family protein / calcium-binding EF hand family protein||calcium-binding EF hand family protein | GO:0005634|nucleus;GO:0005509|calcium ion binding | GhM_A05G4929.1,GhM_D04G0018.1,GhM_A08G1673.1,GhM_A07G1623.1,GhM_D07G1589.1,GhM_A08G1674.1,GhM_D08G1628.1,GhM_A11G1199.1,GhM_D11G1205.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G48930||AT5G23740 | EMB1080; EMB1080 (embryo defective 1080); structural constituent of ribosome||RPS11-BETA; RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0005618|cell wall;GO:0022627|cytosolic small ribosomal subunit;GO:0009793|embryonic development ending in seed dormancy;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane | GhM_A06G0588.1,GhM_D06G0592.1,GhM_A08G0718.1,GhM_A08G3059.1,GhM_A08G1162.1,GhM_D08G1147.1,GhM_A13G2651.1,GhM_D13G2554.1,GhM_D08G2987.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G13600 | calmodulin-binding family protein | GO:0008150|biological_process;GO:0005516|calmodulin binding;GO:0005575|cellular_component | GhM_A06G1278.1,GhM_D06G1360.1,GhM_A08G1011.1,GhM_D08G0966.1,GhM_A13G2756.1,GhM_A08G0175.1,GhM_D08G0162.1,GhM_D13G2647.1,GhM_D13G2622.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G47370 | 40S ribosomal protein S20 (RPS20B) | GO:0015935|small ribosomal subunit;GO:0003723|RNA binding;GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0016020|membrane | GhM_A07G0493.1,GhM_D11G0088.1,GhM_A09G0652.1,GhM_A09G2172.1,GhM_D09G2086.1,GhM_A11G0084.1,GhM_D07G0487.1,GhM_D09G0599.1,GhM_D12G3128.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G61790 | CNX1, ATCNX1; calnexin 1 (CNX1) | GO:0051082|unfolded protein binding;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0005792|microsome;GO:0005509|calcium ion binding;GO:0005739|mitochondrion;GO:0005783|endoplasmic reticulum;GO:0006457|protein folding;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A07G0572.1,GhM_D07G0561.1,GhM_A09G3017.1,GhM_D09G2878.1,GhM_A11G0484.1,GhM_D11G0465.1,GhM_A12G2471.1,GhM_D12G2356.1,GhM_D13G0009.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G25500||AT3G25493 | ||AFH1, FH1, AHF1, ATFH1; AFH1 (FORMIN HOMOLOGY 1); actin binding / actin filament binding / protein binding | ;GO:0005515|protein binding;GO:0030036|actin cytoskeleton organization;GO:0005886|plasma membrane;GO:0003779|actin binding;GO:0016020|membrane;GO:0051015|actin filament binding | GhM_A07G1080.1,GhM_D07G1061.1,GhM_D01G1280.1,GhM_D02G1258.1,GhM_D11G2892.1,GhM_A11G1700.1,GhM_D11G1687.1,GhM_D01G1279.1,GhM_D02G1259.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G25140||AT3G02350 | GAUT8, QUA1; QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||GAUT9; GAUT9 (Galacturonosyltransferase 9); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0016051|carbohydrate biosynthetic process;GO:0045489|pectin biosynthetic process;GO:0005739|mitochondrion;GO:0016758|transferase activity, transferring hexosyl groups;GO:0005794|Golgi apparatus;GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0010289|homogalacturonan biosynthetic process | GhM_A07G1120.1,GhM_D07G1102.1,GhM_A07G1969.1,GhM_D07G1916.1,GhM_A12G0642.1,GhM_A07G2281.1,GhM_D07G2211.1,GhM_A12G0641.1,GhM_D12G0644.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G00660 | DEAD/DEAH box helicase, putative | GO:0019048|virus-host interaction;GO:0003676|nucleic acid binding;GO:0016032|viral reproduction;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A07G1748.1,GhM_D07G1717.1,GhM_A08G0423.1,GhM_D08G0410.1,GhM_A08G1772.1,GhM_D08G1725.1,GhM_A11G1007.1,GhM_D11G1022.1,GhM_D04G1665.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G02580 | NADH-ubiquinone oxidoreductase 24 kDa subunit, putative | GO:0005747|mitochondrial respiratory chain complex I;GO:0006979|response to oxidative stress;GO:0006120|mitochondrial electron transport, NADH to ubiquinone;GO:0008137|NADH dehydrogenase (ubiquinone) activity;GO:0005739|mitochondrion;GO:0045271|respiratory chain complex I;GO:0008270|zinc ion binding | GhM_A07G2686.1,GhM_D07G2583.1,GhM_A08G0591.1,GhM_D08G0561.1,GhM_D03G1554.1,GhM_D11G0381.1,GhM_D05G3265.1,GhM_D10G1837.1,GhM_D08G1139.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G28600 | NPGR2; NPGR2 (no pollen germination related 2); calmodulin binding | GO:0005886|plasma membrane;GO:0005516|calmodulin binding | GhM_A07G2758.1,GhM_D07G2660.1,GhM_A08G2481.1,GhM_D08G2428.1,GhM_A11G1558.1,GhM_D11G1552.1,GhM_D07G2661.1,GhM_A07G2759.1,GhM_D07G2662.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G62010 | unknown protein | GO:0005575|cellular_component | GhM_A08G0447.1,GhM_D08G0432.1,GhM_A08G1668.1,GhM_D08G1623.1,GhM_A11G1209.1,GhM_D11G1215.1,GhM_A11G1369.1,GhM_A11G1370.1,GhM_A13G0526.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G63150||AT5G27540 | MIRO1, emb2473; MIRO1 (Miro-related GTP-ase 1); GTP binding||MIRO2, ATCBG; MIRO2 (MIRO-RELATED GTP-ASE 2); GTPase/ calcium ion binding | GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0005509|calcium ion binding;GO:0009737|response to abscisic acid stimulus;GO:0005739|mitochondrion | GhM_A08G0854.1,GhM_D08G0808.1,GhM_A08G2709.1,GhM_D08G2647.1,GhM_A11G3742.1,GhM_D11G3664.1,GhM_D02G1318.1,GhM_D05G0706.1,GhM_D07G1139.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G24990||AT1G22050||AT2G47890 | MUB6; MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)||zinc finger (B-box type) family protein||ATGP4; ATGP4 | GO:0003674|molecular_function;GO:0005622|intracellular;GO:0005886|plasma membrane;GO:0006464|protein modification process;GO:0005575|cellular_component | GhM_A08G0916.1,GhM_D08G0873.1,GhM_A11G1379.1,GhM_D11G1372.1,GhM_A12G0085.1,GhM_A08G1588.1,GhM_D08G1537.1,GhM_D08G1538.1,GhM_D12G0094.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G10770||AT5G53510||AT4G27730 | ATOPT6, OPT6; OPT6 (OLIGOPEPTIDE TRANSPORTER 1); oligopeptide transporter||ATOPT9, OPT9; ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9); oligopeptide transporter||ATOPT7, OPT7; OPT7 (OLIGOPEPTIDE TRANSPORTER 7); oligopeptide transporter | GO:0006857|oligopeptide transport;GO:0015198|oligopeptide transporter activity;GO:0016020|membrane;GO:0005886|plasma membrane | GhM_A08G1414.1,GhM_D08G1406.1,GhM_A08G1415.1,GhM_D11G0506.1,GhM_A11G0521.1,GhM_D11G0505.1,GhM_D11G0172.1,GhM_A11G0174.1,GhM_D09G2158.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G62240 | zinc finger (C2H2 type) family protein | GO:0005515|protein binding;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A08G1650.1,GhM_D08G1606.1,GhM_A11G1246.1,GhM_D11G1250.1,GhM_A11G1245.1,GhM_A12G1585.1,GhM_D12G1536.1,GhM_D11G3362.1,GhM_A11G3450.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT2G45340||AT5G51560 | leucine-rich repeat transmembrane protein kinase, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A08G1823.1,GhM_D08G1773.1,GhM_A12G3234.1,GhM_A09G0649.1,GhM_D09G0598.1,GhM_D06G1223.1,GhM_D07G2053.1,GhM_D12G3123.1,GhM_D08G1774.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G52420 | unknown protein | GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A09G2215.1,GhM_D09G2121.1,GhM_D02G0681.1,GhM_D09G1074.1,GhM_D06G2614.1,GhM_D12G0958.1,GhM_D09G0409.1,GhM_D13G1301.1,GhM_D11G2085.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT4G16760||AT2G35690 | ACX1, ATACX1; ACX1 (ACYL-COA OXIDASE 1); acyl-CoA oxidase||ACX5; ACX5 (ACYL-COA OXIDASE 5); FAD binding / acyl-CoA dehydrogenase/ acyl-CoA oxidase/ electron carrier/ oxidoreductase/ oxidoreductase, acting on the CH-CH group of donors | GO:0009695|jasmonic acid biosynthetic process;GO:0009055|electron carrier activity;GO:0005777|peroxisome;GO:0009620|response to fungus;GO:0003997|acyl-CoA oxidase activity;GO:0009555|pollen development;GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors;GO:0046686|response to cadmium ion;GO:0009611|response to wounding;GO:0001676|long-chain fatty acid metabolic process;GO:0002213|defense response to insect;GO:0016491|oxidoreductase activity;GO:0006635|fatty acid beta-oxidation;GO:0050660|FAD binding;GO:0003995|acyl-CoA dehydrogenase activity | GhM_A09G2388.1,GhM_D09G2276.1,GhM_A11G0310.1,GhM_D11G0295.1,GhM_A12G2702.1,GhM_D12G2589.1,GhM_D06G1844.1,GhM_D10G1085.1,GhM_D12G0104.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT3G53210||AT1G75500 | nodulin MtN21 family protein | GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A10G1112.1,GhM_D10G0984.1,GhM_D03G0824.1,GhM_D09G1004.1,GhM_D04G0660.1,GhM_D07G0595.1,GhM_D09G0166.1,GhM_D11G0667.1,GhM_D05G3781.1 | 9 | 0 | Gossypium | Cotton | |||
| - | AT5G26850 | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: cyclin-related (TAIR:AT2G41830.1); Has 199 Blast hits to 197 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 19; Plants - 59; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_A11G3431.1,GhM_D11G3341.1,GhM_A13G1536.1,GhM_D13G1420.1,GhM_A13G1537.1,GhM_D13G1421.1,GhM_A13G1538.1,GhM_A13G1539.1,GhM_D13G1422.1 | 9 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D01G1734.1,GhM_D07G1645.1,GhM_D02G1068.1,GhM_D06G1429.1,GhM_D06G0847.1,GhM_D11G0589.1,GhM_D03G0858.1,GhM_D12G0934.1,GhM_D03G1379.1 | 9 | 0 | Gossypium | Cotton | |||
| TA1032:GhM_A05G2938.1,GhM_A05G2940.1,GhM_A05G2942.1 | AT3G16150 | L-asparaginase, putative / L-asparagine amidohydrolase, putative | GO:0006516|glycoprotein catabolic process;GO:0004067|asparaginase activity;GO:0005575|cellular_component | GhM_A05G2316.1,GhM_D05G2949.1,GhM_D02G0984.1,GhM_D06G0226.1,GhM_D05G2332.1,GhM_A06G0222.1 | 9 | 1 | Gossypium | Cotton | |||
| TA112:GhM_D05G4014.1,GhM_D05G4017.1,GhM_D05G4018.1,GhM_D05G4019.1,GhM_D05G4030.1,GhM_D05G4045.1,GhM_D05G4046.1 | AT1G12775||AT1G12300||AT1G12700 | pentatricopeptide (PPR) repeat-containing protein||LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269 proteins in 197 species: Archae - 2; Bacteria - 23; Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0; Other Eukaryotes - 1551 (source: NCBI BLink).||helicase domain-containing protein / pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003676|nucleic acid binding;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A05G2996.1,GhM_A10G1595.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1228:GhM_A11G0103.1,GhM_A11G0104.1 | AT5G51990||AT1G12630||AT5G52020 | DNA binding / transcription activator/ transcription factor||AP2 domain-containing protein||CBF4, DREB1D; CBF4 (C- REPEAT-BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0050832|defense response to fungus | GhM_A09G0586.1,GhM_D11G0106.1,GhM_D09G0500.1,GhM_A12G3196.1,GhM_A09G2189.1,GhM_D11G0107.1,GhM_D09G2103.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1504:GhM_A13G1794.1,GhM_A13G1800.1 | AT1G21970||AT5G47640||AT2G37060||AT2G38880 | NF-YB8; NF-YB8 (NUCLEAR FACTOR Y, SUBUNIT B8); transcription factor||LEC1, EMB 212, EMB212, NF-YB9; LEC1 (LEAFY COTYLEDON 1); transcription activator/ transcription factor||NF-YB2; NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2); transcription factor||NF-YB1; NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0043193|positive regulation of gene-specific transcription;GO:0016602|CCAAT-binding factor complex;GO:0045723|positive regulation of fatty acid biosynthetic process;GO:0010262|somatic embryogenesis;GO:0006355|regulation of transcription, DNA-dependent;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0045893|positive regulation of transcription, DNA-dependent | GhM_D13G1671.1,GhM_A01G0974.1,GhM_A01G2683.1,GhM_A05G3397.1,GhM_D13G1678.1,GhM_D01G0933.1,GhM_D01G2611.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1605:GhM_D01G2003.1,GhM_D01G2005.1 | AT2G21190||AT4G38790 | ER lumen protein retaining receptor family protein | GO:0004872|receptor activity;GO:0006621|protein retention in ER lumen;GO:0016021|integral to membrane;GO:0015031|protein transport;GO:0046923|ER retention sequence binding | GhM_A01G2034.1,GhM_A03G2625.1,GhM_A06G0043.1,GhM_A12G0438.1,GhM_D02G2644.1,GhM_D12G0357.1,GhM_D06G0040.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1838:GhM_D04G1821.1,GhM_D04G1822.1 | AT4G03550||AT4G04970 | ATGSL1, ATGSL01, GSL01, GSL1; GSL1 (GLUCAN SYNTHASE-LIKE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups||ATGSL05, GSL05, ATGSL5, PMR4, GSL5; ATGSL05 (GLUCAN SYNTHASE-LIKE 5); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | GO:0042742|defense response to bacterium;GO:0009863|salicylic acid mediated signaling pathway;GO:0009965|leaf morphogenesis;GO:0009620|response to fungus;GO:0009555|pollen development;GO:0010150|leaf senescence;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0052544|callose deposition in cell wall during defense response;GO:0006952|defense response;GO:0006075|1,3-beta-glucan biosynthetic process;GO:0003843|1,3-beta-glucan synthase activity;GO:0052542|callose deposition during defense response;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0000003|reproduction;GO:0000148|1,3-beta-glucan synthase complex | GhM_A04G1341.1,GhM_A03G2101.1,GhM_D02G2127.1,GhM_D13G0737.1,GhM_A13G0629.1,GhM_A05G1821.1,GhM_D05G1836.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1847:GhM_D04G2045.1,GhM_D04G2046.1 | AT2G09990 | 40S ribosomal protein S16 (RPS16A) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0016020|membrane | GhM_A01G0103.1,GhM_A03G2468.1,GhM_A04G1568.1,GhM_A13G0459.1,GhM_D01G0083.1,GhM_D02G2491.1,GhM_D13G0449.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1996:GhM_D05G4297.1,GhM_D05G4300.1 | AT1G16240 | SYP51, ATSYP51; SYP51 (SYNTAXIN OF PLANTS 51); SNAP receptor | GO:0010008|endosome membrane;GO:0016192|vesicle-mediated transport;GO:0005773|vacuole;GO:0005484|SNAP receptor activity | GhM_A01G0914.1,GhM_A04G0110.1,GhM_A13G1842.1,GhM_D01G0872.1,GhM_D13G1728.1,GhM_D08G0315.1,GhM_A08G0332.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2109:GhM_A01G0385.1,GhM_A01G0386.1 | AT1G66340||AT2G40940 | ERS1, ERS; ERS1 (ETHYLENE RESPONSE SENSOR 1); ethylene binding / protein histidine kinase/ receptor||ETR1, EIN1, ETR; ETR1 (ETHYLENE RESPONSE 1); ethylene binding / protein histidine kinase/ two-component response regulator | GO:0009739|response to gibberellin stimulus;GO:0005789|endoplasmic reticulum membrane;GO:0009733|response to auxin stimulus;GO:0009690|cytokinin metabolic process;GO:0051740|ethylene binding;GO:0005783|endoplasmic reticulum;GO:0006952|defense response;GO:0010119|regulation of stomatal movement;GO:0004673|protein histidine kinase activity;GO:0016020|membrane;GO:0000156|two-component response regulator activity;GO:0009737|response to abscisic acid stimulus;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0009871|jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway;GO:0009625|response to insect;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0050665|hydrogen peroxide biosynthetic process;GO:0004872|receptor activity;GO:0010182|sugar mediated signaling pathway;GO:0052544|callose deposition in cell wall during defense response;GO:0009727|detection of ethylene stimulus;GO:0042742|defense response to bacterium | GhM_D01G0371.1,GhM_D05G3854.1,GhM_A04G0529.1,GhM_A12G1671.1,GhM_D11G1323.1,GhM_D12G1617.1,GhM_A11G1322.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2158:GhM_A01G1719.1,GhM_A01G1720.1 | AT1G12780 | UGE1; UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization | GO:0006950|response to stress;GO:0003978|UDP-glucose 4-epimerase activity;GO:0046983|protein dimerization activity;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0046369|galactose biosynthetic process | GhM_A07G2965.1,GhM_D12G2703.1,GhM_A03G1620.1,GhM_A12G2814.1,GhM_A07G2436.1,GhM_D08G2297.1,GhM_A08G2350.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2364:GhM_D09G0090.1,GhM_D09G0093.1 | AT1G30330 | ARF6; ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor | GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0009908|flower development;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity | GhM_A09G0092.1,GhM_A05G1632.1,GhM_A10G0493.1,GhM_A12G0967.1,GhM_D05G1647.1,GhM_D12G0828.1,GhM_D10G0474.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2471:GhM_D10G0973.1,GhM_D10G0975.1 | AT4G36130 | 60S ribosomal protein L8 (RPL8C) | GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0005773|vacuole | GhM_A02G2168.1,GhM_A10G1121.1,GhM_A11G0513.1,GhM_A11G2056.1,GhM_D03G0104.1,GhM_D07G0676.1,GhM_D11G0495.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2541:GhM_D11G0168.1,GhM_D11G0170.1 | AT4G27745||AT4G27740 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27745.1); Has 684 Blast hits to 682 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 132; Plants - 111; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: yippee family protein (TAIR:AT5G53940.1); Has 697 Blast hits to 697 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 132; Plants - 110; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G1416.1,GhM_A11G0171.1,GhM_A12G2953.1,GhM_D03G1412.1,GhM_D08G1407.1,GhM_D12G2841.1,GhM_A11G0172.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2697:GhM_D12G0911.1,GhM_D12G0914.1 | - | - | - | GhM_A02G1687.1,GhM_A05G3781.1,GhM_A07G2364.1,GhM_A11G2983.1,GhM_D07G2886.1,GhM_Scaf202G326.1,GhM_Scaf227G353.1 | 9 | 1 | Gossypium | Cotton | |||
| TA2879:GhM_A02G0228.1,GhM_A02G0229.1 | AT4G13800||AT1G34470||AT3G23870 | permease-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2278.1,GhM_D02G0225.1,GhM_D01G2235.1,GhM_A03G2774.1,GhM_D02G2779.1,GhM_D04G2191.1,GhM_A04G1719.1 | 9 | 1 | Gossypium | Cotton | |||
| TA359:GhM_D02G0090.1,GhM_D02G0091.1,GhM_D02G0092.1,GhM_D02G0100.1 | AT3G59770||AT3G25520||AT5G39740 | ATL5, PGY3, OLI5, RPL5A; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome||OLI7, RPL5B; 60S ribosomal protein L5 (RPL5B)||SAC9; SAC9; inositol or phosphatidylinositol phosphatase | GO:0009644|response to high light intensity;GO:0022626|cytosolic ribosome;GO:0006913|nucleocytoplasmic transport;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0005730|nucleolus;GO:0008283|cell proliferation;GO:0016020|membrane;GO:0005773|vacuole;GO:0009965|leaf morphogenesis;GO:0006970|response to osmotic stress;GO:0022625|cytosolic large ribosomal subunit;GO:0046488|phosphatidylinositol metabolic process;GO:0005737|cytoplasm;GO:0006412|translation;GO:0042254|ribosome biogenesis;GO:0009955|adaxial/abaxial pattern formation;GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0009507|chloroplast;GO:0008097|5S rRNA binding;GO:0005634|nucleus;GO:0005840|ribosome;GO:0010015|root morphogenesis;GO:0009409|response to cold | GhM_A02G0080.1,GhM_A09G2598.1,GhM_D09G2476.1,GhM_A02G0081.1,GhM_D07G2422.1 | 9 | 1 | Gossypium | Cotton | |||
| TA3611:GhM_Scaf024G147.1,GhM_Scaf024G148.1 | - | - | - | GhM_A03G1076.1,GhM_A05G3869.1,GhM_A06G1732.1,GhM_Scaf005G088.1,GhM_Scaf182G307.1,GhM_Scaf058G210.1,GhM_Scaf095G243.1 | 9 | 1 | Gossypium | Cotton | |||
| TA413:GhM_D08G0529.1,GhM_D08G0532.1,GhM_D08G0533.1,GhM_D08G0534.1 | AT1G07390||AT3G53240||AT1G54475||AT1G58190||AT4G13810 | ||AtRLP47; AtRLP47 (Receptor Like Protein 47); protein binding||AtRLP1; protein binding||AtRLP45; AtRLP45 (Receptor Like Protein 45); protein binding||AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding | ;GO:0005515|protein binding;GO:0012505|endomembrane system;GO:0006952|defense response;GO:0007165|signal transduction;GO:0005575|cellular_component | GhM_A05G4645.1,GhM_A08G0533.1,GhM_A10G2757.1,GhM_A08G0564.1,GhM_D08G0507.1 | 9 | 1 | Gossypium | Cotton | |||
| TA826:GhM_D08G1952.1,GhM_D08G1953.1,GhM_D08G1954.1 | AT1G31780||AT4G19185 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 281 Blast hits to 279 proteins in 131 species: Archae - 0; Bacteria - 2; Metazoa - 132; Fungi - 106; Plants - 21; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).||integral membrane family protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2004.1,GhM_A03G0017.1,GhM_A08G2005.1,GhM_A12G2554.1,GhM_D03G2087.1,GhM_D12G2439.1 | 9 | 1 | Gossypium | Cotton | |||
| TA92:GhM_A03G0221.1,GhM_A03G0222.1,GhM_A03G0223.1,GhM_A03G0224.1,GhM_A03G0225.1,GhM_A03G0226.1,GhM_A03G0227.1,GhM_A03G0228.1 | AT4G12320||AT4G12330||AT4G12310 | CYP706A7; CYP706A7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A6; CYP706A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A5; CYP706A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D03G1885.1 | 9 | 1 | Gossypium | Cotton | |||
| TA1036:GhM_A05G3184.1,GhM_A05G3186.1,GhM_A05G3187.1;TA1959:GhM_D05G3185.1,GhM_D05G3187.1 | AT5G07030||AT3G54400 | aspartyl protease family protein||aspartic-type endopeptidase | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0048046|apoplast;GO:0005618|cell wall;GO:0006508|proteolysis | GhM_A05G4786.1,GhM_A10G2351.1,GhM_D04G0189.1,GhM_D10G2271.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1047:GhM_A05G4375.1,GhM_A05G4376.1,GhM_A05G4378.1;TA1809:GhM_D04G0564.1,GhM_D04G0565.1 | AT3G28960||AT5G15240 | amino acid transporter family protein | GO:0005886|plasma membrane;GO:0016020|membrane;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity | GhM_A11G0802.1,GhM_D11G0821.1,GhM_A05G4377.1,GhM_D13G0842.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1244:GhM_A11G0987.1,GhM_A11G0989.1;TA2572:GhM_D11G1001.1,GhM_D11G1003.1 | AT4G00750||AT4G00740 | dehydration-responsive family protein||dehydration-responsive protein-related | GO:0008150|biological_process;GO:0005794|Golgi apparatus | GhM_A07G1767.1,GhM_D07G1732.1,GhM_A08G0426.1,GhM_D08G0412.1,GhM_D08G1715.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1249:GhM_A11G1112.1,GhM_A11G1113.1;TA2576:GhM_D11G1122.1,GhM_D11G1123.1 | AT4G01070 | GT72B1, UGT72B1; GT72B1; UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups | GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0042178|xenobiotic catabolic process;GO:0009636|response to toxin;GO:0009651|response to salt stress;GO:0006805|xenobiotic metabolic process;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A11G1111.1,GhM_A07G1695.1,GhM_A12G1469.1,GhM_D07G1661.1,GhM_D12G1406.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1435:GhM_A12G2835.1,GhM_A12G2837.1;TA2748:GhM_D12G2722.1,GhM_D12G2724.1 | AT4G11600||AT1G63460||AT2G43350||AT2G31570 | ATGPX2; ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase||glutathione peroxidase, putative||ATGPX3; ATGPX3 (GLUTATHIONE PEROXIDASE 3); glutathione peroxidase||ATGPX6, PHGPX, LSC803; ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase | GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0009738|abscisic acid mediated signaling pathway;GO:0042631|cellular response to water deprivation;GO:0042542|response to hydrogen peroxide;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0004602|glutathione peroxidase activity;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A08G0929.1,GhM_A08G2375.1,GhM_A09G2075.1,GhM_D08G0884.1,GhM_D09G1982.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1468:GhM_A13G0508.1,GhM_A13G0510.1;TA3190:GhM_A05G2939.1,GhM_A05G2941.1 | AT5G67500||AT1G78110 | unknown protein||VDAC2, ATVDAC2; VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006820|anion transport;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0009617|response to bacterium;GO:0005741|mitochondrial outer membrane;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008308|voltage-gated anion channel activity | GhM_D13G0497.1,GhM_A02G1633.1,GhM_A11G2747.1,GhM_A13G0509.1,GhM_A13G2792.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1469:GhM_A13G0547.1,GhM_A13G0549.1;TA2783:GhM_D13G0532.1,GhM_D13G0534.1 | AT4G37940 | AGL21; AGL21; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G2365.1,GhM_A11G0605.1,GhM_A12G0188.1,GhM_D02G2384.1,GhM_D12G0196.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1502:GhM_A13G1755.1,GhM_A13G1757.1;TA2819:GhM_D13G1631.1,GhM_D13G1633.1 | AT5G23810||AT1G55730||AT3G13320 | AAP7; AAP7; amino acid transmembrane transporter||CAX2, atcax2; CAX2 (CATION EXCHANGER 2); calcium:cation antiporter/ calcium:hydrogen antiporter||ATCAX5, CAX5; ATCAX5; calcium:cation antiporter/ cation:cation antiporter | GO:0012505|endomembrane system;GO:0015369|calcium:hydrogen antiporter activity;GO:0015368|calcium:cation antiporter activity;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0006828|manganese ion transport;GO:0006812|cation transport;GO:0015491|cation:cation antiporter activity;GO:0015691|cadmium ion transport;GO:0006816|calcium ion transport;GO:0030001|metal ion transport;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0005773|vacuole | GhM_A04G0023.1,GhM_A04G0024.1,GhM_D05G4396.1,GhM_D05G4397.1,GhM_A01G1013.1 | 9 | 2 | Gossypium | Cotton | |||
| TA152:GhM_D06G2435.1,GhM_D06G2436.1,GhM_D06G2437.1,GhM_D06G2438.1,GhM_D06G2439.1,GhM_D06G2440.1;TA3335:GhM_A06G2438.1,GhM_A06G2439.1 | AT1G74170||AT1G58190||AT1G74180||AT1G07390 | AtRLP1; protein binding||AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding||AtRLP14; AtRLP14 (Receptor Like Protein 14); protein binding||AtRLP13; AtRLP13 (Receptor Like Protein 13); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0007165|signal transduction;GO:0005575|cellular_component | GhM_A05G0141.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1634:GhM_D02G0055.1,GhM_D02G0057.1;TA2870:GhM_A02G0046.1,GhM_A02G0048.1 | AT5G01820||AT5G58380 | ATSR1, SnRK3.15, CIPK14, ATCIPK14; ATSR1 (ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||CIPK10, PKS2, SIP1, SNRK3.8; SIP1 (SOS3-INTERACTING PROTEIN 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005773|vacuole;GO:0004674|protein serine/threonine kinase activity | GhM_D09G2485.1,GhM_A09G2604.1,GhM_A10G1857.1,GhM_D05G3149.1,GhM_A05G3147.1 | 9 | 2 | Gossypium | Cotton | |||
| TA163:GhM_D11G3185.1,GhM_D11G3186.1,GhM_D11G3187.1,GhM_D11G3188.1,GhM_D11G3189.1,GhM_D11G3190.1;TA1310:GhM_A11G3264.1,GhM_A11G3267.1 | AT4G27190 | disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A11G3265.1 | 9 | 2 | Gossypium | Cotton | |||
| TA172:GhM_A02G0302.1,GhM_A02G0303.1,GhM_A02G0304.1,GhM_A02G0305.1,GhM_A02G0306.1,GhM_A02G0308.1;TA671:GhM_D02G0328.1,GhM_D02G0329.1,GhM_D02G0330.1 | AT2G29420||AT1G78340||AT2G29460 | ATGSTU7, GST25; ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase||ATGSTU22; ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase||ATGSTU4, GST22; ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4); glutathione transferase | GO:0009751|response to salicylic acid stimulus;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm | - | 9 | 2 | Gossypium | Cotton | |||
| TA175:GhM_A04G0380.1,GhM_A04G0381.1,GhM_A04G0383.1,GhM_A04G0384.1,GhM_A04G0387.1,GhM_A04G0388.1;TA3064:GhM_A04G0487.1,GhM_A04G0489.1 | AT4G27190||AT4G27220 | disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_D05G3987.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1780:GhM_D03G1756.1,GhM_D03G1757.1;TA2966:GhM_A03G0370.1,GhM_A03G0371.1 | AT5G05340 | peroxidase, putative | GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0004601|peroxidase activity;GO:0048046|apoplast;GO:0005618|cell wall | GhM_A05G3155.1,GhM_D05G3158.1,GhM_D03G1755.1,GhM_A05G4764.1,GhM_D04G0173.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1837:GhM_D04G1767.1,GhM_D04G1769.1;TA3087:GhM_A04G1283.1,GhM_A04G1285.1 | AT5G08680||AT5G08670||ATCG00480 | ATP synthase beta chain, mitochondrial, putative||ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism||ATPB; chloroplast-encoded gene for beta subunit of ATP synthase | GO:0005747|mitochondrial respiratory chain complex I;GO:0005507|copper ion binding;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0000275|mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);GO:0046933|hydrogen ion transporting ATP synthase activity, rotational mechanism;GO:0031977|thylakoid lumen;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005618|cell wall;GO:0050897|cobalt ion binding;GO:0016020|membrane;GO:0008270|zinc ion binding | GhM_A01G1685.1,GhM_D01G1668.1,GhM_A07G2152.1,GhM_D02G1062.1,GhM_D01G0722.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1881:GhM_D05G0503.1,GhM_D05G0504.1;TA3127:GhM_A05G0479.1,GhM_A05G0480.1 | AT4G32940 | GAMMA-VPE, GAMMAVPE; GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase | GO:0006508|proteolysis;GO:0006624|vacuolar protein processing;GO:0000323|lytic vacuole | GhM_D10G0580.1,GhM_A06G1089.1,GhM_A07G0267.1,GhM_D07G0266.1,GhM_D06G1099.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1912:GhM_D05G1598.1,GhM_D05G1599.1;TA3155:GhM_A05G1583.1,GhM_A05G1584.1 | AT1G53840||AT3G14310||AT1G53830 | ATPME2; ATPME2; pectinesterase||ATPME3; ATPME3; pectinesterase||ATPME1; ATPME1; pectinesterase | GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0009624|response to nematode;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0005576|extracellular region;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A06G1889.1,GhM_D06G1875.1,GhM_A10G0558.1,GhM_D10G0533.1,GhM_D05G0420.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1920:GhM_D05G1864.1,GhM_D05G1865.1;TA3162:GhM_A05G1853.1,GhM_A05G1854.1 | AT4G21580||AT1G11200||AT4G21570 | unknown protein||oxidoreductase, zinc-binding dehydrogenase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_A10G0217.1,GhM_D10G0202.1,GhM_A05G1855.1,GhM_A10G0219.1,GhM_D10G0204.1 | 9 | 2 | Gossypium | Cotton | |||
| TA2047:GhM_D06G1597.1,GhM_D06G1599.1;TA3302:GhM_A06G1634.1,GhM_A06G1635.1 | AT4G05020||AT1G07180||AT4G21490||AT2G29990 | NDB3; NDB3; NADH dehydrogenase||NDA2; NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2); FAD binding / NADH dehydrogenase/ oxidoreductase||NDB2; NDB2 (NAD(P)H dehydrogenase B2); FAD binding / disulfide oxidoreductase/ oxidoreductase||ATNDI1, NDA1; NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase | GO:0003954|NADH dehydrogenase activity;GO:0005739|mitochondrion;GO:0050660|FAD binding;GO:0031304|intrinsic to mitochondrial inner membrane;GO:0016491|oxidoreductase activity | GhM_D10G0215.1,GhM_A07G1257.1,GhM_D07G1237.1,GhM_A09G1196.1,GhM_A10G0230.1 | 9 | 2 | Gossypium | Cotton | |||
| TA2084:GhM_D06G2557.1,GhM_D06G2558.1;TA3338:GhM_A06G2564.1,GhM_A06G2565.1 | AT1G28960 | ATNUDT15, ATNUDX15; ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15); hydrolase | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005739|mitochondrion | GhM_A06G1569.1,GhM_D06G1686.1,GhM_D10G0315.1,GhM_A10G0326.1,GhM_D07G2835.1 | 9 | 2 | Gossypium | Cotton | |||
| TA2274:GhM_D07G2509.1,GhM_D07G2510.1;TA3410:GhM_A07G2607.1,GhM_A07G2608.1 | AT2G20190 | ATCLASP, CLASP; CLASP (CLIP-ASSOCIATED PROTEIN); binding | GO:0050821|protein stabilization;GO:0007067|mitosis;GO:0005488|binding;GO:0016049|cell growth;GO:0005876|spindle microtubule;GO:0005886|plasma membrane | GhM_A07G1903.1,GhM_A08G2493.1,GhM_D08G2439.1,GhM_D07G1859.1,GhM_D07G1858.1 | 9 | 2 | Gossypium | Cotton | |||
| TA2298:GhM_D08G0501.1,GhM_D08G0502.1;TA2764:GhM_D13G0013.1,GhM_D13G0014.1 | AT4G36890 | IRX14; IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase | GO:0016757|transferase activity, transferring glycosyl groups;GO:0048367|shoot development;GO:0042285|xylosyltransferase activity;GO:0010051|xylem and phloem pattern formation;GO:0010417|glucuronoxylan biosynthetic process;GO:0010154|fruit development;GO:0016020|membrane | GhM_A02G2002.1,GhM_A08G0525.1,GhM_A11G2292.1,GhM_D03G0265.1,GhM_D11G2261.1 | 9 | 2 | Gossypium | Cotton | |||
| TA230:GhM_D04G1310.1,GhM_D04G1311.1,GhM_D04G1312.1,GhM_D04G1313.1,GhM_D04G1315.1;TA998:GhM_A04G0859.1,GhM_A04G0861.1,GhM_A04G0864.1 | AT2G36480 | zinc finger (C2H2-type) family protein | GO:0008150|biological_process;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A04G0860.1 | 9 | 2 | Gossypium | Cotton | |||
| TA231:GhM_D04G2293.1,GhM_D04G2294.1,GhM_D04G2295.1,GhM_D04G2296.1,GhM_D04G2297.1;TA3109:GhM_A04G1818.1,GhM_A04G1819.1 | AT1G67980||AT4G34050 | caffeoyl-CoA 3-O-methyltransferase, putative||CCOAMT; CCoAMT; caffeoyl-CoA O-methyltransferase | GO:0042409|caffeoyl-CoA O-methyltransferase activity;GO:0046686|response to cadmium ion;GO:0009809|lignin biosynthetic process;GO:0005829|cytosol;GO:0009805|coumarin biosynthetic process | GhM_D09G0819.1,GhM_A09G0883.1 | 9 | 2 | Gossypium | Cotton | |||
| TA243:GhM_D06G1899.1,GhM_D06G1900.1,GhM_D06G1901.1,GhM_D06G1902.1,GhM_D06G1904.1;TA1061:GhM_A06G1919.1,GhM_A06G1921.1,GhM_A06G1922.1 | AT4G05200||AT4G23230||AT4G23180 | protein kinase family protein||CRK10, RLK4; CRK10 (CYSTEINE-RICH RLK10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A06G1913.1 | 9 | 2 | Gossypium | Cotton | |||
| TA244:GhM_A01G0418.1,GhM_A01G0420.1,GhM_A01G0422.1,GhM_A01G0423.1,GhM_A01G0424.1;TA350:GhM_D01G0402.1,GhM_D01G0404.1,GhM_D01G0406.1,GhM_D01G0407.1 | - | - | - | - | 9 | 2 | Gossypium | Cotton | |||
| TA246:GhM_A01G0670.1,GhM_A01G0671.1,GhM_A01G0672.1,GhM_A01G0673.1,GhM_A01G0674.1;TA352:GhM_D01G0635.1,GhM_D01G0637.1,GhM_D01G0639.1,GhM_D01G0640.1 | AT4G21700 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast | - | 9 | 2 | Gossypium | Cotton | |||
| TA263:GhM_D09G2632.1,GhM_D09G2633.1,GhM_D09G2634.1,GhM_D09G2635.1,GhM_D09G2636.1;TA535:GhM_A09G2760.1,GhM_A09G2761.1,GhM_A09G2762.1,GhM_A09G2763.1 | AT1G06620 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0010302|2-oxoglutarate-dependent dioxygenase activity | - | 9 | 2 | Gossypium | Cotton | |||
| TA2641:GhM_D11G3351.1,GhM_D11G3353.1;TA3031:GhM_A03G2533.1,GhM_A03G2539.1 | AT5G22250 | CCR4-NOT transcription complex protein, putative | GO:0005634|nucleus;GO:0003676|nucleic acid binding | GhM_A03G2304.1,GhM_D02G2558.1,GhM_A11G3441.1,GhM_D02G2565.1,GhM_D10G2954.1 | 9 | 2 | Gossypium | Cotton | |||
| TA270:GhM_D11G2915.1,GhM_D11G2916.1,GhM_D11G2917.1,GhM_D11G2918.1,GhM_D11G2920.1;TA1295:GhM_A11G2990.1,GhM_A11G2991.1 | AT1G28030||AT1G52820||AT1G52800 | 2-oxoglutarate-dependent dioxygenase, putative||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0010302|2-oxoglutarate-dependent dioxygenase activity;GO:0016491|oxidoreductase activity | GhM_A11G2979.1,GhM_D05G4131.1 | 9 | 2 | Gossypium | Cotton | |||
| TA277:GhM_D12G0116.1,GhM_D12G0117.1,GhM_D12G0118.1,GhM_D12G0119.1,GhM_D12G0120.1;TA337:GhM_A12G0108.1,GhM_A12G0109.1,GhM_A12G0110.1,GhM_A12G0111.1 | AT3G62730 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 9 | 2 | Gossypium | Cotton | |||
| TA299:GhM_A07G1475.1,GhM_A07G1476.1,GhM_A07G1477.1,GhM_A07G1478.1,GhM_A07G1479.1;TA405:GhM_D07G1448.1,GhM_D07G1450.1,GhM_D07G1451.1,GhM_D07G1452.1 | AT5G12400 | PHD finger transcription factor, putative | GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent | - | 9 | 2 | Gossypium | Cotton | |||
| TA301:GhM_A08G0261.1,GhM_A08G0262.1,GhM_A08G0263.1,GhM_A08G0264.1,GhM_A08G0266.1;TA818:GhM_D08G0253.1,GhM_D08G0254.1,GhM_D08G0256.1 | - | - | - | GhM_D08G0255.1 | 9 | 2 | Gossypium | Cotton | |||
| TA302:GhM_A08G0495.1,GhM_A08G0496.1,GhM_A08G0497.1,GhM_A08G0498.1,GhM_A08G0499.1;TA412:GhM_D08G0476.1,GhM_D08G0477.1,GhM_D08G0478.1,GhM_D08G0479.1 | AT4G11290||AT1G44970||AT4G33420||AT1G05260||AT3G01190||AT1G77100 | peroxidase 27 (PER27) (P27) (PRXR7)||RCI3, RCI3A; RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase||peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0009409|response to cold;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0042538|hyperosmotic salinity response;GO:0009269|response to desiccation;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | - | 9 | 2 | Gossypium | Cotton | |||
| TA306:GhM_A09G0729.1,GhM_A09G0730.1,GhM_A09G0732.1,GhM_A09G0733.1,GhM_A09G0734.1;TA429:GhM_D09G0674.1,GhM_D09G0675.1,GhM_D09G0677.1,GhM_D09G0678.1 | AT3G18180||AT3G18170 | transferase, transferring glycosyl groups | GO:0008150|biological_process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 9 | 2 | Gossypium | Cotton | |||
| TA307:GhM_A09G0829.1,GhM_A09G0833.1,GhM_A09G0834.1,GhM_A09G0835.1,GhM_A09G0836.1;TA836:GhM_D09G0771.1,GhM_D09G0772.1,GhM_D09G0775.1 | AT5G59540||AT1G06620||AT2G30830 | 2-oxoglutarate-dependent dioxygenase, putative||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008150|biological_process;GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity;GO:0010302|2-oxoglutarate-dependent dioxygenase activity;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A09G0832.1 | 9 | 2 | Gossypium | Cotton | |||
| TA316:GhM_A10G2250.1,GhM_A10G2256.1,GhM_A10G2260.1,GhM_A10G2267.1;TA865:GhM_D10G2181.1,GhM_D10G2186.1,GhM_D10G2189.1 | AT5G38020||AT3G21950||AT3G11480 | methyltransferase||BSMT1, ATBSMT1; BSMT1; S-adenosylmethionine-dependent methyltransferase||S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0006633|fatty acid biosynthetic process;GO:0008168|methyltransferase activity;GO:0046686|response to cadmium ion;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0009611|response to wounding;GO:0006952|defense response;GO:0005575|cellular_component;GO:0051707|response to other organism | GhM_D10G2174.1,GhM_D10G2183.1 | 9 | 2 | Gossypium | Cotton | |||
| TA384:GhM_D04G2318.1,GhM_D04G2319.1,GhM_D04G2322.1,GhM_D04G2323.1;TA491:GhM_A04G1846.1,GhM_A04G1847.1,GhM_A04G1852.1,GhM_A04G1853.1 | - | - | - | GhM_D04G2324.1 | 9 | 2 | Gossypium | Cotton | |||
| TA386:GhM_D05G0693.1,GhM_D05G0694.1,GhM_D05G0695.1,GhM_D05G0696.1;TA493:GhM_A05G0674.1,GhM_A05G0675.1,GhM_A05G0676.1,GhM_A05G0677.1 | AT5G10770 | chloroplast nucleoid DNA-binding protein, putative | GO:0006508|proteolysis;GO:0003677|DNA binding | GhM_D06G1291.1 | 9 | 2 | Gossypium | Cotton | |||
| TA389:GhM_D05G2335.1,GhM_D05G2336.1,GhM_D05G2337.1,GhM_D05G2338.1;TA499:GhM_A05G2319.1,GhM_A05G2320.1,GhM_A05G2321.1,GhM_A05G2322.1 | AT1G34300||AT3G13380||AT5G24080||AT4G00340 | BRL3; BRL3 (BRI1-LIKE 3); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase||protein kinase family protein||RLK4; RLK4 (RECEPTOR-LIKE PROTEIN KINASE 4); protein kinase/ sugar binding||lectin protein kinase family protein | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G2945.1 | 9 | 2 | Gossypium | Cotton | |||
| TA393:GhM_D05G4339.1,GhM_D05G4342.1,GhM_D05G4346.1,GhM_D05G4349.1;TA3042:GhM_A04G0066.1,GhM_A04G0068.1 | AT1G55900||AT3G13170 | TIM50, emb1860; TIM50||ATSPO11-1; ATSPO11-1; ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic | GO:0006259|DNA metabolic process;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0000706|meiotic DNA double-strand break processing;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0006265|DNA topological change;GO:0007131|reciprocal meiotic recombination;GO:0005739|mitochondrion;GO:0007129|synapsis;GO:0042138|meiotic DNA double-strand break formation;GO:0003677|DNA binding;GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity;GO:0005743|mitochondrial inner membrane;GO:0051026|chiasma assembly;GO:0034090|maintenance of meiotic sister chromatid cohesion;GO:0005524|ATP binding | GhM_D01G0923.1,GhM_A08G0335.1,GhM_D08G0318.1 | 9 | 2 | Gossypium | Cotton | |||
| TA409:GhM_D07G2625.1,GhM_D07G2629.1,GhM_D07G2631.1,GhM_D07G2633.1;TA515:GhM_A07G2727.1,GhM_A07G2729.1,GhM_A07G2731.1,GhM_A07G2733.1 | AT3G23240 | ERF1, ATERF1; ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006952|defense response;GO:0009867|jasmonic acid mediated signaling pathway | GhM_A11G1534.1 | 9 | 2 | Gossypium | Cotton | |||
| TA432:GhM_D09G2434.1,GhM_D09G2435.1,GhM_D09G2436.1,GhM_D09G2437.1;TA533:GhM_A09G2553.1,GhM_A09G2554.1,GhM_A09G2555.1,GhM_A09G2557.1 | AT1G06000||AT1G73880 | UGT89B1; UGT89B1 (UDP-GLUCOSYL TRANSFERASE 89B1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl group||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0051555|flavonol biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A09G2556.1 | 9 | 2 | Gossypium | Cotton | |||
| TA496:GhM_A05G2006.1,GhM_A05G2007.1,GhM_A05G2008.1,GhM_A05G2009.1;TA725:GhM_D05G2018.1,GhM_D05G2019.1,GhM_D05G2020.1 | AT1G20670||AT1G76380 | DNA-binding bromodomain-containing protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A02G1097.1,GhM_D02G1130.1 | 9 | 2 | Gossypium | Cotton | |||
| TA504:GhM_A06G2035.1,GhM_A06G2036.1,GhM_A06G2038.1,GhM_A06G2040.1;TA766:GhM_D06G2018.1,GhM_D06G2019.1,GhM_D06G2021.1 | AT5G47550 | cysteine protease inhibitor, putative / cystatin, putative | GO:0008150|biological_process;GO:0004869|cysteine-type endopeptidase inhibitor activity;GO:0005618|cell wall | GhM_A01G2857.1,GhM_D01G2784.1 | 9 | 2 | Gossypium | Cotton | |||
| TA522:GhM_A08G2152.1,GhM_A08G2153.1,GhM_A08G2155.1,GhM_A08G2156.1;TA828:GhM_D08G2108.1,GhM_D08G2109.1,GhM_D08G2110.1 | AT4G17030 | ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1; ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) | GO:0012505|endomembrane system;GO:0009826|unidimensional cell growth;GO:0019953|sexual reproduction;GO:0009828|plant-type cell wall loosening;GO:0005576|extracellular region | GhM_A03G0106.1,GhM_D03G1995.1 | 9 | 2 | Gossypium | Cotton | |||
| TA552:GhM_A10G2225.1,GhM_A10G2227.1,GhM_A10G2228.1;TA2498:GhM_D10G2153.1,GhM_D10G2154.1 | AT4G32510||AT5G25430||AT1G15460 | anion exchanger||ATBOR4, BOR4; BOR4 (REQUIRES HIGH BORON 4); anion exchanger | GO:0046713|boron transport;GO:0006820|anion transport;GO:0015380|anion exchanger activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A05G0110.1,GhM_A06G2476.1,GhM_A08G3053.1,GhM_D05G0113.1 | 9 | 2 | Gossypium | Cotton | |||
| TA579:GhM_A11G2107.1,GhM_A11G2109.1,GhM_A11G2114.1;TA886:GhM_D11G2084.1,GhM_D11G2086.1,GhM_D11G2092.1 | AT1G43910||AT4G05380||AT2G18193 | AAA-type ATPase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A12G0705.1,GhM_D12G0699.1,GhM_D11G2692.1 | 9 | 2 | Gossypium | Cotton | |||
| TA589:GhM_A11G3466.1,GhM_A11G3468.1,GhM_A11G3469.1;TA1315:GhM_A11G3400.1,GhM_A11G3407.1 | AT4G16143||AT3G06720||AT5G37620 | DC1 domain-containing protein||AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, IMPA1; IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding / protein transporter||IMPA-2; IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005730|nucleolus;GO:0005829|cytosol;GO:0005618|cell wall;GO:0006606|protein import into nucleus;GO:0008270|zinc ion binding;GO:0005635|nuclear envelope;GO:0005575|cellular_component;GO:0008565|protein transporter activity | GhM_A11G3408.1,GhM_A11G3448.1,GhM_D11G3379.1,GhM_D11G3312.1 | 9 | 2 | Gossypium | Cotton | |||
| TA616:GhM_A12G3236.1,GhM_A12G3237.1,GhM_A12G3238.1;TA925:GhM_D12G3125.1,GhM_D12G3126.1,GhM_D12G3127.1 | AT4G12300||AT4G22690||AT4G12320 | CYP706A1; CYP706A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A6; CYP706A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A4; CYP706A4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005739|mitochondrion;GO:0005506|iron ion binding;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A10G2720.1,GhM_D10G2659.1,GhM_A10G2721.1 | 9 | 2 | Gossypium | Cotton | |||
| TA641:GhM_A13G2531.1,GhM_A13G2532.1,GhM_A13G2533.1;TA945:GhM_D13G2445.1,GhM_D13G2446.1,GhM_D13G2447.1 | AT2G06520 | PSBX; PSBX (photosystem II subunit X) | GO:0003674|molecular_function;GO:0009535|chloroplast thylakoid membrane;GO:0015979|photosynthesis | GhM_A05G0353.1,GhM_A07G0164.1,GhM_D05G0372.1 | 9 | 2 | Gossypium | Cotton | |||
| TA691:GhM_D04G0100.1,GhM_D04G0101.1,GhM_D04G0102.1;TA3250:GhM_A05G4850.1,GhM_A05G4851.1 | AT5G17050 | UGT78D2; UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2); UDP-glycosyltransferase/ anthocyanidin 3-O-glucosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0047213|anthocyanidin 3-O-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity | GhM_A06G0652.1,GhM_D06G0657.1,GhM_D08G1045.1,GhM_A08G1179.1 | 9 | 2 | Gossypium | Cotton | |||
| TA714:GhM_D04G2348.1,GhM_D04G2349.1,GhM_D04G2351.1;TA3112:GhM_A04G1876.1,GhM_A04G1877.1 | AT1G14685||AT2G01930 | BPC1, BBR, ATBPC1; BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor||BPC2, BBR/BPC2, ATBPC2; BPC2 (BASIC PENTACYSTEINE 2); DNA binding / transcription factor | GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0016566|specific transcriptional repressor activity;GO:0003700|transcription factor activity;GO:0003677|DNA binding | GhM_A01G1730.1,GhM_A03G1515.1,GhM_D01G1718.1,GhM_D02G1629.1 | 9 | 2 | Gossypium | Cotton | |||
| TA753:GhM_D06G0134.1,GhM_D06G0135.1,GhM_D06G0136.1;TA3261:GhM_A06G0138.1,GhM_A06G0139.1 | AT5G42650 | AOS, CYP74A, DDE2; AOS (ALLENE OXIDE SYNTHASE); allene oxide synthase/ hydro-lyase/ oxygen binding | GO:0009579|thylakoid;GO:0009941|chloroplast envelope;GO:0016020|membrane | GhM_A03G1557.1,GhM_A05G2916.1,GhM_D05G2932.1,GhM_D02G1036.1 | 9 | 2 | Gossypium | Cotton | |||
| TA756:GhM_D06G0302.1,GhM_D06G0311.1,GhM_D06G0312.1;TA3267:GhM_A06G0299.1,GhM_A06G0300.1 | AT1G09980||AT1G58350 | ZW18; ZW18||INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: ZW18 (TAIR:AT1G58350.2); Has 342 Blast hits to 275 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005739|mitochondrion | GhM_A01G1414.1,GhM_D01G1385.1,GhM_A05G2409.1,GhM_D05G2421.1 | 9 | 2 | Gossypium | Cotton | |||
| TA761:GhM_D06G0466.1,GhM_D06G0467.1,GhM_D06G0468.1;TA1054:GhM_A06G0455.1,GhM_A06G0456.1,GhM_A06G0457.1 | - | - | - | GhM_A08G1453.1,GhM_A10G2704.1,GhM_D10G2645.1 | 9 | 2 | Gossypium | Cotton | |||
| TA833:GhM_D08G2928.1,GhM_D08G2929.1,GhM_D08G2931.1;TA3494:GhM_A08G2993.1,GhM_A08G2994.1 | AT3G12800 | SDRB, DECR; SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B); binding / catalytic/ oxidoreductase | GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | GhM_A04G0571.1,GhM_A08G2992.1,GhM_A12G0526.1,GhM_D12G0520.1 | 9 | 2 | Gossypium | Cotton | |||
| TA910:GhM_D12G0903.1,GhM_D12G0904.1,GhM_D12G0908.1;TA911:GhM_D12G0905.1,GhM_D12G0906.1,GhM_D12G0907.1 | - | - | - | GhM_A03G0236.1,GhM_A03G1999.1,GhM_D03G1877.1 | 9 | 2 | Gossypium | Cotton | |||
| TA954:GhM_A02G0603.1,GhM_A02G0604.1,GhM_A02G0605.1;TA1662:GhM_D02G0597.1,GhM_D02G0598.1 | AT3G16910 | AAE7, ACN1; AAE7 (ACYL-ACTIVATING ENZYME 7); AMP binding / acetate-CoA ligase | GO:0003987|acetate-CoA ligase activity;GO:0005777|peroxisome;GO:0016208|AMP binding;GO:0006083|acetate metabolic process;GO:0006097|glyoxylate cycle | GhM_A09G0912.1,GhM_A10G2150.1,GhM_D09G0846.1,GhM_D10G2086.1 | 9 | 2 | Gossypium | Cotton | |||
| TA961:GhM_A02G1919.1,GhM_A02G1921.1,GhM_A02G1929.1;TA1732:GhM_D03G0341.1,GhM_D03G0343.1 | AT5G65700||AT5G65710 | BAM1; BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase||HSL2; HSL2 (HAESA-Like 2); ATP binding / kinase/ protein serine/threonine kinase | GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0048229|gametophyte development;GO:0010480|microsporocyte differentiation;GO:0048437|floral organ development;GO:0048653|anther development;GO:0009934|regulation of meristem structural organization;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0010075|regulation of meristem growth;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A11G2500.1,GhM_A12G1078.1,GhM_D12G0968.1,GhM_D11G2389.1 | 9 | 2 | Gossypium | Cotton | |||
| TA1104:GhM_A08G2831.1,GhM_A08G2832.1,GhM_A08G2839.1;TA2350:GhM_D08G2778.1,GhM_D08G2779.1;TA2808:GhM_D13G1220.1,GhM_D13G1221.1 | AT5G33340||AT1G64830 | CDR1; CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase||aspartyl protease family protein | GO:0012505|endomembrane system;GO:0010337|regulation of salicylic acid metabolic process;GO:0048046|apoplast;GO:0010310|regulation of hydrogen peroxide metabolic process;GO:0006508|proteolysis;GO:0042742|defense response to bacterium | GhM_A13G1050.1,GhM_A13G1178.1 | 9 | 3 | Gossypium | Cotton | |||
| TA1467:GhM_A13G0474.1,GhM_A13G0475.1;TA2781:GhM_D13G0460.1,GhM_D13G0461.1;TA1550:GhM_D01G0088.1,GhM_D01G0089.1 | AT4G35220 | cyclase family protein | GO:0012505|endomembrane system | GhM_A12G0244.1,GhM_D12G0251.1,GhM_A01G0109.1 | 9 | 3 | Gossypium | Cotton | |||
| TA1734:GhM_D03G0365.1,GhM_D03G0367.1;TA2936:GhM_A02G1898.1,GhM_A02G1901.1;TA2698:GhM_D12G0952.1,GhM_D12G0953.1 | AT2G22620 | lyase | GO:0005975|carbohydrate metabolic process;GO:0016829|lyase activity | GhM_A11G2463.1,GhM_A12G1156.1,GhM_A12G1097.1 | 9 | 3 | Gossypium | Cotton | |||
| TA1937:GhM_D05G2452.1,GhM_D05G2453.1;TA3176:GhM_A05G2442.1,GhM_A05G2443.1;TA2151:GhM_A01G1424.1,GhM_A01G1425.1 | AT1G09910||AT4G24430||AT1G09890 | lyase | GO:0008150|biological_process;GO:0005975|carbohydrate metabolic process;GO:0016829|lyase activity;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A06G0325.1,GhM_D06G0338.1,GhM_D01G1396.1 | 9 | 3 | Gossypium | Cotton | |||
| TA2032:GhM_D06G0995.1,GhM_D06G0996.1;TA3291:GhM_A06G1022.1,GhM_A06G1023.1;TA3351:GhM_A07G0206.1,GhM_A07G0207.1 | AT4G33220||AT2G26440||AT5G20860||AT3G43270 | pectinesterase family protein||PME44, ATPME44; enzyme inhibitor/ pectinesterase | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_D13G2404.1,GhM_D07G0208.1,GhM_D07G0206.1 | 9 | 3 | Gossypium | Cotton | |||
| TA2340:GhM_D08G2351.1,GhM_D08G2353.1;TA3479:GhM_A08G2406.1,GhM_A08G2408.1;TA2678:GhM_D12G0071.1,GhM_D12G0073.1 | AT2G48010 | RKF3; RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase/ receptor signaling protein serine/threonine kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0004702|receptor signaling protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_D11G1393.1,GhM_A11G1403.1,GhM_A12G0068.1 | 9 | 3 | Gossypium | Cotton | |||
| TA296:GhM_A06G2262.1,GhM_A06G2263.1,GhM_A06G2272.1,GhM_A06G2278.1,GhM_A06G2280.1;TA3324:GhM_A06G2241.1,GhM_A06G2242.1;TA2070:GhM_D06G2240.1,GhM_D06G2253.1 | AT3G27500||AT1G35610||AT5G59920||AT3G21210||AT5G22355||AT2G43220||AT1G55420 | DC1 domain-containing protein||ULI3; ULI3; diacylglycerol binding / heme binding||EDA11; EDA11 (embryo sac development arrest 11); protein binding / zinc ion binding||protein binding / zinc ion binding | GO:0006950|response to stress;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0020037|heme binding;GO:0019992|diacylglycerol binding;GO:0009411|response to UV;GO:0005737|cytoplasm;GO:0009561|megagametogenesis;GO:0010224|response to UV-B;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 9 | 3 | Gossypium | Cotton | |||
| TA356:GhM_D01G1554.1,GhM_D01G1555.1,GhM_D01G1556.1,GhM_D01G1560.1;TA1135:GhM_A10G0345.1,GhM_A10G0346.1;TA2450:GhM_D10G0332.1,GhM_D10G0333.1 | AT1G17020 | SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0010260|organ senescence;GO:0009813|flavonoid biosynthetic process;GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005575|cellular_component | GhM_A01G1590.1 | 9 | 3 | Gossypium | Cotton | |||
| TA388:GhM_D05G1675.1,GhM_D05G1676.1,GhM_D05G1677.1,GhM_D05G1678.1;TA3156:GhM_A05G1667.1,GhM_A05G1668.1;TA2054:GhM_D06G1789.1,GhM_D06G1790.1 | AT2G34500||AT2G34490 | CYP710A2; CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2); C-22 sterol desaturase/ oxygen binding||CYP710A1; CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1); C-22 sterol desaturase/ oxygen binding | GO:0012505|endomembrane system | GhM_A06G1802.1 | 9 | 3 | Gossypium | Cotton | |||
| TA563:GhM_A10G2765.1,GhM_A10G2766.1,GhM_A10G2770.1;TA2522:GhM_D10G2694.1,GhM_D10G2695.1;TA873:GhM_D10G2698.1,GhM_D10G2701.1,GhM_D10G2702.1 | AT2G16050||AT1G55420 | EDA11; EDA11 (embryo sac development arrest 11); protein binding / zinc ion binding||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT1G20990.1); Has 719 Blast hits to 448 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 717; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009561|megagametogenesis;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A10G2769.1 | 9 | 3 | Gossypium | Cotton | |||
| TA614:GhM_A12G3104.1,GhM_A12G3105.1,GhM_A12G3106.1;TA923:GhM_D12G2990.1,GhM_D12G2991.1,GhM_D12G2992.1;TA2065:GhM_D06G2117.1,GhM_D06G2118.1 | AT5G09280||AT1G11920 | pectate lyase family protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0030570|pectate lyase activity;GO:0016829|lyase activity;GO:0005575|cellular_component | GhM_A08G2593.1 | 9 | 3 | Gossypium | Cotton | |||
| TA656:GhM_D01G1722.1,GhM_D01G1723.1,GhM_D01G1724.1;TA787:GhM_A01G1735.1,GhM_A01G1736.1,GhM_A01G1737.1;TA2883:GhM_A02G0357.1,GhM_A02G0358.1 | AT1G59950||AT1G59960 | aldo/keto reductase, putative | GO:0009651|response to salt stress;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_D02G0382.1 | 9 | 3 | Gossypium | Cotton | |||
| TA683:GhM_D03G1316.1,GhM_D03G1319.1,GhM_D03G1321.1;TA2983:GhM_A03G0775.1,GhM_A03G0781.1;TA2984:GhM_A03G0777.1,GhM_A03G0779.1 | AT5G62360||AT4G25250||AT5G51520||AT5G62350 | invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)||invertase/pectin methylesterase inhibitor family protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0030599|pectinesterase activity;GO:0005575|cellular_component | GhM_D03G1322.1,GhM_D03G1231.1 | 9 | 3 | Gossypium | Cotton | |||
| TA770:GhM_D06G2255.1,GhM_D06G2261.1,GhM_D06G2262.1;TA1065:GhM_A06G2273.1,GhM_A06G2274.1,GhM_A06G2277.1;TA771:GhM_D06G2256.1,GhM_D06G2257.1,GhM_D06G2258.1 | AT3G49601 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37820.1); Has 58354 Blast hits to 32469 proteins in 1203 species: Archae - 56; Bacteria - 5471; Metazoa - 26539; Fungi - 6511; Plants - 2874; Viruses - 282; Other Eukaryotes - 16621 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 9 | 3 | Gossypium | Cotton | |||
| TA1015:GhM_A05G0204.1,GhM_A05G0205.1,GhM_A05G0207.1;TA1873:GhM_D05G0210.1,GhM_D05G0211.1;TA1528:GhM_A13G2317.1,GhM_A13G2319.1;TA2839:GhM_D13G2205.1,GhM_D13G2207.1 | AT1G50680||AT1G51120 | AP2 domain-containing transcription factor, putative | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 9 | 4 | Gossypium | Cotton | |||
| TA1023:GhM_A05G2326.1,GhM_A05G2327.1,GhM_A05G2332.1;TA1932:GhM_D05G2342.1,GhM_D05G2347.1;TA2905:GhM_A02G0985.1,GhM_A02G0988.1;TA1678:GhM_D02G0978.1,GhM_D02G0981.1 | AT4G37320||AT4G37360||AT4G37340||AT4G37370||AT5G10600||AT5G10610 | CYP81D3; CYP81D3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D2; CYP81D2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81K2; CYP81K2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D8; CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81K1; CYP81K1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D5; CYP81D5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0005506|iron ion binding;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 9 | 4 | Gossypium | Cotton | |||
| TA1055:GhM_A06G0558.1,GhM_A06G0559.1,GhM_A06G0561.1;TA2027:GhM_D06G0567.1,GhM_D06G0568.1;TA3356:GhM_A07G0337.1,GhM_A07G0338.1;TA2205:GhM_D07G0336.1,GhM_D07G0337.1 | AT2G25680 | MOT1; MOT1 (molybdate transporter 1); molybdate ion transmembrane transporter/ sulfate transmembrane transporter | GO:0005739|mitochondrion;GO:0015689|molybdate ion transport;GO:0015116|sulfate transmembrane transporter activity;GO:0015098|molybdate ion transmembrane transporter activity;GO:0005773|vacuole | - | 9 | 4 | Gossypium | Cotton | |||
| TA1133:GhM_A10G0334.1,GhM_A10G0335.1;TA2449:GhM_D10G0322.1,GhM_D10G0323.1;TA3159:GhM_A05G1761.1,GhM_A05G1762.1;TA1916:GhM_D05G1771.1,GhM_D05G1773.1 | AT2G31100||AT4G18550 | lipase class 3 family protein||triacylglycerol lipase | GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | GhM_D05G1772.1 | 9 | 4 | Gossypium | Cotton | |||
| TA609:GhM_A12G1883.1,GhM_A12G1885.1,GhM_A12G1886.1;TA3212:GhM_A05G3662.1,GhM_A05G3663.1;TA1970:GhM_D05G3619.1,GhM_D05G3620.1;TA2729:GhM_D12G1813.1,GhM_D12G1814.1 | AT1G70520||AT1G70530 | protein kinase family protein | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 9 | 4 | Gossypium | Cotton | |||
| TA903:GhM_D12G0282.1,GhM_D12G0283.1,GhM_D12G0284.1;TA3248:GhM_A05G4725.1,GhM_A05G4729.1;TA1799:GhM_D04G0218.1,GhM_D04G0219.1;TA1356:GhM_A12G0277.1,GhM_A12G0278.1 | AT4G39490||AT2G23180||AT2G21910||AT1G65340 | CYP96A10; CYP96A10; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP96A5; CYP96A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A1; CYP96A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A3; CYP96A3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 9 | 4 | Gossypium | Cotton | |||
| TA930:GhM_D13G0405.1,GhM_D13G0412.1,GhM_D13G0413.1;TA1355:GhM_A12G0275.1,GhM_A12G0276.1;TA2683:GhM_D12G0280.1,GhM_D12G0281.1;TA1465:GhM_A13G0426.1,GhM_A13G0427.1 | AT2G15780 | glycine-rich protein | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0009055|electron carrier activity | - | 9 | 4 | Gossypium | Cotton | |||
| - | AT1G12640 | membrane bound O-acyl transferase (MBOAT) family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008415|acyltransferase activity | GhM_A01G0022.1,GhM_A06G2683.1,GhM_A03G1158.1,GhM_D02G1193.1,GhM_A10G0013.1,GhM_A07G0004.1,GhM_D06G2670.1,GhM_D11G0003.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G42190||AT1G75950 | ASK2, SKP1B; ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein binding / ubiquitin-protein ligase||SKP1, ASK1, ATSKP1, SKP1A, UIP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase | GO:0007140|male meiosis;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0005819|spindle;GO:0046686|response to cadmium ion;GO:0009793|embryonic development ending in seed dormancy;GO:0005634|nucleus;GO:0000151|ubiquitin ligase complex;GO:0007067|mitosis;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0045910|negative regulation of DNA recombination;GO:0009524|phragmoplast;GO:0004842|ubiquitin-protein ligase activity | GhM_A01G0045.1,GhM_D01G0027.1,GhM_A01G2111.1,GhM_D01G2079.1,GhM_A02G2201.1,GhM_D03G0069.1,GhM_A06G0024.1,GhM_D06G0018.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G78160 | APUM7; APUM7 (Arabidopsis Pumilio 7); RNA binding / binding | GO:0003729|mRNA binding;GO:0003723|RNA binding;GO:0005737|cytoplasm | GhM_A01G0158.1,GhM_D01G0134.1,GhM_A13G0797.1,GhM_D13G0588.1,GhM_D12G2188.1,GhM_D02G1088.1,GhM_D08G1065.1,GhM_D04G0787.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G35300 | TMT2; TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2); carbohydrate transmembrane transporter/ nucleoside transmembrane transporter/ sugar:hydrogen symporter | GO:0015144|carbohydrate transmembrane transporter activity;GO:0005337|nucleoside transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0005773|vacuole | GhM_A01G0167.1,GhM_D01G0145.1,GhM_A04G1449.1,GhM_A01G1116.1,GhM_D01G1081.1,GhM_A13G0767.1,GhM_D13G0622.1,GhM_D04G1938.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G08290 | YLS8; YLS8; catalytic | GO:0003824|catalytic activity;GO:0010150|leaf senescence;GO:0005681|spliceosomal complex;GO:0005634|nucleus;GO:0007067|mitosis;GO:0005737|cytoplasm | GhM_A01G0179.1,GhM_D01G0159.1,GhM_A04G1398.1,GhM_D04G1887.1,GhM_A13G0701.1,GhM_D13G0671.1,GhM_D10G1860.1,GhM_D11G2601.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G54680 | ILR3; ILR3 (iaa-leucine resistant3); DNA binding / transcription factor | GO:0005634|nucleus | GhM_A01G0188.1,GhM_D01G0168.1,GhM_A13G1908.1,GhM_A01G0788.1,GhM_D01G0750.1,GhM_A11G3508.1,GhM_D11G3420.1,GhM_D13G1804.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G03420 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0199.1,GhM_D01G0179.1,GhM_A03G2126.1,GhM_D02G2144.1,GhM_A04G1357.1,GhM_D04G1843.1,GhM_A12G1789.1,GhM_D12G1734.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G64560 | magnesium transporter CorA-like family protein (MRS2-2) | GO:0015095|magnesium ion transmembrane transporter activity;GO:0016020|membrane;GO:0030001|metal ion transport;GO:0046873|metal ion transmembrane transporter activity | GhM_A01G0270.1,GhM_D01G0236.1,GhM_A07G2695.1,GhM_D07G2593.1,GhM_A08G0783.1,GhM_D08G0750.1,GhM_A10G1357.1,GhM_D10G1740.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G18410 | PIR, KLK, PIR121, SRA1, PIRP; PIR121; transcription activator | GO:0016563|transcription activator activity;GO:0010090|trichome morphogenesis;GO:0030036|actin cytoskeleton organization;GO:0045010|actin nucleation;GO:0031209|SCAR complex | GhM_A01G0351.1,GhM_A12G2442.1,GhM_A02G0403.1,GhM_A12G0974.1,GhM_A03G1661.1,GhM_A12G1183.1,GhM_A04G1074.1,GhM_A11G1228.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G56070 | LOS1; LOS1; copper ion binding / translation elongation factor/ translation factor, nucleic acid binding | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005730|nucleolus;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G0369.1,GhM_D01G0358.1,GhM_A04G0543.1,GhM_D05G3845.1,GhM_A11G3692.1,GhM_D11G3613.1,GhM_A13G2055.1,GhM_D13G1945.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G53400 | unknown protein | GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation | GhM_A01G0524.1,GhM_D01G0497.1,GhM_A04G0444.1,GhM_D05G3929.1,GhM_A05G1716.1,GhM_A10G0364.1,GhM_D10G0352.1,GhM_D05G1726.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G78700 | brassinosteroid signalling positive regulator-related | GO:0008150|biological_process;GO:0030528|transcription regulator activity;GO:0005575|cellular_component | GhM_A01G0537.1,GhM_D01G0505.1,GhM_A06G2546.1,GhM_D06G2539.1,GhM_A10G0360.1,GhM_D10G0348.1,GhM_A11G3646.1,GhM_D11G3556.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G46020 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0624.1,GhM_D01G0591.1,GhM_A04G0377.1,GhM_D05G3992.1,GhM_A10G0313.1,GhM_D10G0298.1,GhM_A13G1988.1,GhM_D13G1889.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G53140 | dynamin family protein | GO:0003924|GTPase activity | GhM_A01G0661.1,GhM_D01G0626.1,GhM_A04G0324.1,GhM_D05G4048.1,GhM_D04G1743.1,GhM_D11G2345.1,GhM_D11G1619.1,GhM_D13G1441.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G27320||AT5G54430 | ATPHOS34, PHOS34; universal stress protein (USP) family protein||ATPHOS32, PHOS32; universal stress protein (USP) family protein | GO:0006950|response to stress;GO:0002238|response to molecule of fungal origin;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005829|cytosol;GO:0005886|plasma membrane | GhM_A01G0743.1,GhM_D01G0709.1,GhM_A04G0243.1,GhM_D05G4143.1,GhM_A11G3533.1,GhM_D11G3455.1,GhM_A13G1926.1,GhM_D13G1819.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G27270||AT5G58800 | quinone reductase family protein | GO:0005886|plasma membrane;GO:0010181|FMN binding;GO:0016481|negative regulation of transcription;GO:0016491|oxidoreductase activity | GhM_A01G0761.1,GhM_D01G0719.1,GhM_A03G0685.1,GhM_D03G1421.1,GhM_A04G0234.1,GhM_D05G4154.1,GhM_A10G0200.1,GhM_D10G0191.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G27100||AT5G54780 | RAB GTPase activator | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity;GO:0005739|mitochondrion | GhM_A01G0808.1,GhM_D01G0773.1,GhM_A04G0203.1,GhM_D05G4177.1,GhM_A08G0283.1,GhM_D08G0273.1,GhM_A11G3498.1,GhM_D11G3415.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G07100 | protein transport protein Sec24, putative | GO:0030127|COPII vesicle coat;GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A01G0941.1,GhM_D05G4320.1,GhM_A01G0942.1,GhM_D01G0899.1,GhM_A04G0092.1,GhM_A11G3476.1,GhM_D11G3389.1,GhM_D11G3388.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G55730||AT4G12730 | FLA2; FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)||FLA1; FLA1 (FASCICLIN-LIKE ARAB INOGALACTAN 1) | GO:0046658|anchored to plasma membrane;GO:0010583|response to cyclopentenone;GO:0005618|cell wall;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G0976.1,GhM_D01G0935.1,GhM_A13G1798.1,GhM_D13G1675.1,GhM_A07G2482.1,GhM_D07G2383.1,GhM_A11G1747.1,GhM_D11G1732.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G55840||AT5G47730 | SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putative||SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer protein | GO:0005488|binding;GO:0005215|transporter activity;GO:0005575|cellular_component;GO:0006810|transport | GhM_A01G0989.1,GhM_D01G0958.1,GhM_A04G0051.1,GhM_D05G4368.1,GhM_A13G1784.1,GhM_A06G2069.1,GhM_D06G2051.1,GhM_D13G1660.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G31320 | LBD4; LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) | GO:0008150|biological_process | GhM_A01G1028.1,GhM_D01G0986.1,GhM_A05G1607.1,GhM_D05G1622.1,GhM_A06G1835.1,GhM_D06G1845.1,GhM_A10G0523.1,GhM_D10G0497.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G12830 | auxin-responsive family protein | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_A01G1044.1,GhM_D01G1003.1,GhM_A05G3722.1,GhM_D05G3809.1,GhM_A13G1666.1,GhM_A08G3001.1,GhM_D08G2933.1,GhM_D13G1544.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G61170 | 40S ribosomal protein S19 (RPS19C) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005773|vacuole | GhM_A01G1067.1,GhM_A08G2990.1,GhM_D01G1036.1,GhM_A09G2961.1,GhM_D09G2821.1,GhM_A13G1721.1,GhM_D13G1599.1,GhM_D08G2926.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G38290 | ATAMT2, AMT2;1; ATAMT2 (AMMONIUM TRANSPORTER 2); ammonium transmembrane transporter/ high affinity secondary active ammonium transmembrane transporter | GO:0009624|response to nematode;GO:0015696|ammonium transport;GO:0015398|high affinity secondary active ammonium transmembrane transporter activity;GO:0005886|plasma membrane;GO:0008519|ammonium transmembrane transporter activity | GhM_A01G1089.1,GhM_D01G1052.1,GhM_A08G0799.1,GhM_D08G0765.1,GhM_A11G1478.1,GhM_D11G1467.1,GhM_D13G2168.1,GhM_A13G2283.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G42970||AT1G12900 | GAPA-2; GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase||GAPB; GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0051287|NAD or NADH binding;GO:0009744|response to sucrose stimulus;GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0008943|glyceraldehyde-3-phosphate dehydrogenase activity;GO:0006006|glucose metabolic process;GO:0004365|glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity;GO:0019253|reductive pentose-phosphate cycle;GO:0048046|apoplast;GO:0009416|response to light stimulus;GO:0010319|stromule;GO:0009507|chloroplast;GO:0005488|binding;GO:0008886|glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity;GO:0009535|chloroplast thylakoid membrane;GO:0006096|glycolysis;GO:0009409|response to cold | GhM_A01G1124.1,GhM_D01G1087.1,GhM_A05G2000.1,GhM_D05G2012.1,GhM_A07G2983.1,GhM_D07G2884.1,GhM_A10G0774.1,GhM_D10G0871.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G35090 | CAT2; CAT2 (CATALASE 2); catalase | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast | GhM_A01G1145.1,GhM_D01G1104.1,GhM_A02G2245.1,GhM_D03G0025.1,GhM_A05G2011.1,GhM_D05G2022.1,GhM_A07G2170.1,GhM_D07G2108.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G38510 | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar proton pump B subunit, putative / V-ATPase 57 kDa subunit, putative | GO:0009941|chloroplast envelope;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0015986|ATP synthesis coupled proton transport;GO:0046034|ATP metabolic process;GO:0015992|proton transport;GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G1191.1,GhM_D01G1169.1,GhM_A05G2865.1,GhM_D05G2866.1,GhM_A09G2141.1,GhM_D09G2055.1,GhM_A11G0043.1,GhM_D11G0045.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G42990||AT1G75440 | UBC18; UBC18 (ubiquitin-conjugating enzyme 18); small conjugating protein ligase/ ubiquitin-protein ligase||UBC16; UBC16 (ubiquitin-conjugating enzyme 16); small conjugating protein ligase/ ubiquitin-protein ligase | GO:0019787|small conjugating protein ligase activity;GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process | GhM_A01G1266.1,GhM_D01G1235.1,GhM_A02G2152.1,GhM_D03G0121.1,GhM_A05G2126.1,GhM_D05G2147.1,GhM_A12G0706.1,GhM_D12G0700.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G16580||AT5G66720 | catalytic||5-azacytidine resistance protein -related | GO:0009570|chloroplast stroma;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity | GhM_A01G1298.1,GhM_D01G1270.1,GhM_A05G2188.1,GhM_D05G2213.1,GhM_A11G2168.1,GhM_A02G2104.1,GhM_D03G0163.1,GhM_D11G2143.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G42890||AT4G17650 | aromatic-rich family protein||ATSCP2, SCP2; SCP2 (STEROL CARRIER PROTEIN 2); oxidoreductase/ sterol carrier | GO:0009845|seed germination;GO:0008150|biological_process;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0046487|glyoxylate metabolic process;GO:0032365|intracellular lipid transport;GO:0032934|sterol binding;GO:0006635|fatty acid beta-oxidation;GO:0016491|oxidoreductase activity | GhM_A01G1339.1,GhM_D01G1309.1,GhM_A05G2270.1,GhM_D05G2287.1,GhM_D06G0194.1,GhM_A05G2274.1,GhM_D05G2291.1,GhM_A06G0188.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G28410 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 325 Blast hits to 311 proteins in 62 species: Archae - 4; Bacteria - 12; Metazoa - 199; Fungi - 2; Plants - 61; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1406.1,GhM_A01G1495.1,GhM_A02G2033.1,GhM_D10G0288.1,GhM_A09G1349.1,GhM_A10G0303.1,GhM_A10G2586.1,GhM_A05G4636.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G49630 | AAP6; AAP6 (AMINO ACID PERMEASE 6); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | GO:0005886|plasma membrane | GhM_A01G1411.1,GhM_D01G1384.1,GhM_A05G2408.1,GhM_D05G2420.1,GhM_A05G2961.1,GhM_D05G2969.1,GhM_A06G0295.1,GhM_D06G0297.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G35780||AT1G78150 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1444.1,GhM_D01G1417.1,GhM_A05G2552.1,GhM_D05G2563.1,GhM_A05G3005.1,GhM_D05G3008.1,GhM_A06G0412.1,GhM_D06G0421.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G41740 | VLN2, ATVLN2; VLN2 (VILLIN 2); actin binding | GO:0005515|protein binding;GO:0003779|actin binding;GO:0007010|cytoskeleton organization;GO:0005575|cellular_component | GhM_A01G1486.1,GhM_D01G1491.1,GhM_A01G2457.1,GhM_D01G2396.1,GhM_A02G1441.1,GhM_D03G0876.1,GhM_A11G3931.1,GhM_D11G3843.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G41370 | XPB1, ATXPB1; XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1); ATP binding / ATP-dependent DNA helicase/ ATP-dependent helicase/ DNA binding / helicase/ hydrolase/ nucleic acid binding | GO:0004003|ATP-dependent DNA helicase activity;GO:0016787|hydrolase activity;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0009411|response to UV;GO:0009636|response to toxin;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A01G1487.1,GhM_A01G1908.1,GhM_D03G1812.1,GhM_A03G0312.1,GhM_A11G0251.1,GhM_A03G0313.1,GhM_A06G1276.1,GhM_D11G0246.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G76490 | HMG1, HMGR1; HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1); hydroxymethylglutaryl-CoA reductase | GO:0042282|hydroxymethylglutaryl-CoA reductase activity;GO:0016020|membrane;GO:0008299|isoprenoid biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0016126|sterol biosynthetic process | GhM_A01G1502.1,GhM_D01G1473.1,GhM_A03G2250.1,GhM_A12G0132.1,GhM_A04G1441.1,GhM_D04G1928.1,GhM_A13G0752.1,GhM_D01G0148.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G57650 | LPAT2; LPAT2; 1-acylglycerol-3-phosphate O-acyltransferase | GO:0008152|metabolic process;GO:0005783|endoplasmic reticulum;GO:0003841|1-acylglycerol-3-phosphate O-acyltransferase activity | GhM_A01G1546.1,GhM_D09G1476.1,GhM_A01G2449.1,GhM_D01G2387.1,GhM_A09G1578.1,GhM_D02G0609.1,GhM_D07G1154.1,GhM_D01G1508.1 | 8 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G1576.1,GhM_A08G0003.1,GhM_A03G1723.1,GhM_A03G1217.1,GhM_A12G1079.1,GhM_A03G1131.1,GhM_A07G1011.1,GhM_A04G1072.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G57890||AT2G42230 | tubulin-specific chaperone C-related | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A01G1602.1,GhM_D01G1567.1,GhM_A01G2431.1,GhM_D01G2367.1,GhM_A04G0649.1,GhM_D04G1096.1,GhM_A09G1604.1,GhM_D09G1503.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G74050||AT1G18540 | 60S ribosomal protein L6 (RPL6C)||60S ribosomal protein L6 (RPL6A) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005622|intracellular;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A01G1603.1,GhM_D04G1066.1,GhM_A01G2434.1,GhM_D01G2370.1,GhM_A04G0669.1,GhM_D01G1568.1,GhM_A11G3946.1,GhM_D11G3855.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00070 | PSBK; PSII K protein | GO:0015979|photosynthesis | GhM_A01G1647.1,GhM_D03G0586.1,GhM_A05G4554.1,GhM_A07G1041.1,GhM_A09G1337.1,GhM_D05G3428.1,GhM_D09G0535.1,GhM_D10G1554.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G70300||AT5G14880 | KUP6; KUP6; potassium ion transmembrane transporter||potassium transporter, putative | GO:0006813|potassium ion transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0015079|potassium ion transmembrane transporter activity | GhM_A01G1668.1,GhM_D01G1689.1,GhM_A04G1775.1,GhM_A05G4305.1,GhM_D04G0629.1,GhM_A09G0337.1,GhM_D09G0312.1,GhM_D04G2251.1 | 8 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G1702.1,GhM_A08G1343.1,GhM_A06G1404.1,GhM_A08G1591.1,GhM_A10G2577.1,GhM_A06G0992.1,GhM_A06G1476.1,GhM_A05G3683.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G68130 | AtIDD14; AtIDD14 (Arabidopsis thaliana Indeterminate(ID)-Domain 14); nucleic acid binding / transcription factor/ zinc ion binding | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003676|nucleic acid binding;GO:0003700|transcription factor activity;GO:0008270|zinc ion binding | GhM_A01G1732.1,GhM_D01G1719.1,GhM_A03G1519.1,GhM_D02G1630.1,GhM_A05G3569.1,GhM_D05G3530.1,GhM_D12G1905.1,GhM_A12G1995.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G23190||AT5G51820 | PGM, ATPGMP, PGM1, STF1; PGM (PHOSPHOGLUCOMUTASE); phosphoglucomutase||phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative | GO:0000287|magnesium ion binding;GO:0009507|chloroplast;GO:0009941|chloroplast envelope;GO:0016868|intramolecular transferase activity, phosphotransferases;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0005975|carbohydrate metabolic process;GO:0009590|detection of gravity;GO:0019252|starch biosynthetic process;GO:0005737|cytoplasm;GO:0004614|phosphoglucomutase activity;GO:0009570|chloroplast stroma;GO:0048046|apoplast;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0010319|stromule;GO:0009409|response to cold | GhM_A01G1794.1,GhM_D01G1818.1,GhM_A01G1795.1,GhM_A04G1863.1,GhM_A01G1796.1,GhM_D04G2334.1,GhM_A12G3212.1,GhM_D12G3100.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G01630||AT1G66250 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative||glycosyl hydrolase family 17 protein | GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0046658|anchored to plasma membrane;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0031225|anchored to membrane;GO:0005886|plasma membrane | GhM_A01G1817.1,GhM_D02G1687.1,GhM_A03G1615.1,GhM_D01G1796.1,GhM_A07G2275.1,GhM_D07G2204.1,GhM_A08G0672.1,GhM_D08G0641.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G68050||AT5G57360 | ZTL, LKP1, ADO1, FKL2; ZTL (ZEITLUPE); protein binding / ubiquitin-protein ligase||ADO3, FKF1; FKF1 (FLAVIN-BINDING, KELCH REPEAT, F BOX 1); signal transducer/ two-component sensor/ ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0045449|regulation of transcription;GO:0009908|flower development;GO:0009882|blue light photoreceptor activity;GO:0005575|cellular_component;GO:0043153|entrainment of circadian clock by photoperiod;GO:0009637|response to blue light;GO:0004842|ubiquitin-protein ligase activity;GO:0010498|proteasomal protein catabolic process;GO:0010114|response to red light;GO:0005829|cytosol;GO:0000155|two-component sensor activity;GO:0007623|circadian rhythm;GO:0042752|regulation of circadian rhythm;GO:0005515|protein binding;GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0004871|signal transducer activity;GO:0009911|positive regulation of flower development | GhM_A01G1850.1,GhM_D01G1763.1,GhM_A05G0046.1,GhM_D05G0046.1,GhM_A08G0275.1,GhM_D08G0265.1,GhM_A12G1984.1,GhM_D12G1895.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G13080 | WRKY75, ATWRKY75; WRKY75; transcription factor | GO:0032107|regulation of response to nutrient levels;GO:0005634|nucleus;GO:0043620|regulation of transcription in response to stress;GO:0006355|regulation of transcription, DNA-dependent;GO:0048527|lateral root development;GO:0003700|transcription factor activity | GhM_A01G1902.1,GhM_D01G1880.1,GhM_A05G4007.1,GhM_D04G0896.1,GhM_D10G0845.1,GhM_A10G0796.1,GhM_D09G0464.1,GhM_A09G0620.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G26580||AT1G70600||AT1G23290 | structural constituent of ribosome||RPL27A, RPL27AB; RPL27AB; structural constituent of ribosome||INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide region (InterPro:IPR013026); Has 2147 Blast hits to 1154 proteins in 168 species: Archae - 2; Bacteria - 99; Metazoa - 1301; Fungi - 180; Plants - 105; Viruses - 57; Other Eukaryotes - 403 (source: NCBI BLink). | GO:0008150|biological_process;GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A01G1987.1,GhM_D01G1946.1,GhM_A03G1845.1,GhM_A09G0332.1,GhM_A04G1791.1,GhM_D04G2266.1,GhM_D02G1905.1,GhM_D09G0306.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G12860 | DiT1; DiT1 (dicarboxylate transporter 1); oxoglutarate:malate antiporter | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009624|response to nematode;GO:0009536|plastid;GO:0015743|malate transport;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion;GO:0016020|membrane;GO:0015367|oxoglutarate:malate antiporter activity | GhM_A01G2055.1,GhM_D01G1354.1,GhM_A05G4752.1,GhM_A08G1684.1,GhM_D09G0465.1,GhM_D09G2089.1,GhM_A09G1472.1,GhM_D09G1377.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G35140 | transducin family protein / WD-40 repeat family protein | GO:0000166|nucleotide binding | GhM_A01G2130.1,GhM_A04G1637.1,GhM_A03G2666.1,GhM_D04G2120.1,GhM_A12G0388.1,GhM_D12G0407.1,GhM_D01G2104.1,GhM_D02G2686.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G17200 | ubiquitin family protein | GO:0006464|protein modification process;GO:0003674|molecular_function | GhM_A01G2181.1,GhM_D01G2146.1,GhM_A03G2703.1,GhM_D02G2720.1,GhM_A04G1650.1,GhM_D04G2134.1,GhM_A12G0360.1,GhM_D12G0436.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G36990 | unknown protein | GO:0009507|chloroplast | GhM_A01G2344.1,GhM_D01G2292.1,GhM_A02G0885.1,GhM_D02G0882.1,GhM_A06G0483.1,GhM_D06G0499.1,GhM_A05G3019.1,GhM_D05G3021.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G57200||AT3G08550 | unknown protein||ELD1, ABI8, KOB1; KOB1 (KOBITO) | GO:0008150|biological_process;GO:0009826|unidimensional cell growth;GO:0003674|molecular_function;GO:0009737|response to abscisic acid stimulus;GO:0005737|cytoplasm;GO:0030244|cellulose biosynthetic process;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0009543|chloroplast thylakoid lumen;GO:0005886|plasma membrane;GO:0009749|response to glucose stimulus | GhM_A01G2426.1,GhM_D01G2361.1,GhM_A11G3890.1,GhM_A05G3969.1,GhM_D04G0847.1,GhM_A13G0156.1,GhM_D13G0153.1,GhM_D11G3800.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G52660 | RNA recognition motif (RRM)-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A01G2558.1,GhM_D01G2492.1,GhM_A04G0814.1,GhM_D04G1236.1,GhM_A08G0109.1,GhM_A05G0893.1,GhM_D05G0911.1,GhM_D08G0095.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G52990 | pyruvate kinase, putative | GO:0000287|magnesium ion binding;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0030955|potassium ion binding;GO:0016020|membrane;GO:0006096|glycolysis;GO:0004743|pyruvate kinase activity | GhM_A01G2610.1,GhM_D01G2538.1,GhM_A04G0881.1,GhM_A09G1792.1,GhM_D09G1683.1,GhM_A10G2532.1,GhM_D10G2451.1,GhM_D04G1338.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G53030||AT3G44850 | protein kinase-related||SRPK4; SRPK4 (Ser/Arg-rich protein kinase 4); kinase/ protein kinase | GO:0006979|response to oxidative stress;GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2617.1,GhM_D01G2545.1,GhM_A04G0887.1,GhM_D04G1342.1,GhM_A05G0931.1,GhM_D05G0951.1,GhM_A09G1163.1,GhM_D09G1092.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G03040 | iqd2; iqd2 (IQ-domain 2); calmodulin binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005516|calmodulin binding | GhM_A01G2673.1,GhM_D01G2601.1,GhM_A09G1892.1,GhM_D09G1789.1,GhM_A13G1054.1,GhM_D13G1165.1,GhM_D04G1455.1,GhM_A04G1005.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G39800 | P5CS1, ATP5CS; P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1); delta1-pyrroline-5-carboxylate synthetase | GO:0048364|root development;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0009737|response to abscisic acid stimulus;GO:0006561|proline biosynthetic process;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0042538|hyperosmotic salinity response;GO:0017084|delta1-pyrroline-5-carboxylate synthetase activity;GO:0009414|response to water deprivation;GO:0016020|membrane;GO:0009269|response to desiccation | GhM_A01G2736.1,GhM_D01G2664.1,GhM_A04G1113.1,GhM_D04G1578.1,GhM_A10G2838.1,GhM_D10G2803.1,GhM_A11G4110.1,GhM_D11G4003.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G54020||AT2G37940 | phosphatidic acid phosphatase-related / PAP2-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase-related / PAP2-related (TAIR:AT3G54020.1); Has 316 Blast hits to 316 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 213; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | GO:0045140|inositol phosphoceramide synthase activity;GO:0030148|sphingolipid biosynthetic process;GO:0005739|mitochondrion | GhM_A01G2765.1,GhM_D01G2692.1,GhM_A04G1133.1,GhM_D04G1598.1,GhM_A09G2005.1,GhM_D09G1905.1,GhM_A11G4117.1,GhM_D11G4007.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G38090 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_A01G2790.1,GhM_D01G2715.1,GhM_A04G1158.1,GhM_D04G1626.1,GhM_A09G2022.1,GhM_D09G1924.1,GhM_A11G4124.1,GhM_D11G4015.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G30060||AT5G58590 | Ran-binding protein 1b (RanBP1b)||RANBP1; RANBP1 (RAN BINDING PROTEIN 1); protein binding | GO:0000060|protein import into nucleus, translocation;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0046907|intracellular transport | GhM_A01G2802.1,GhM_D01G2726.1,GhM_A05G1185.1,GhM_D05G1204.1,GhM_A08G2603.1,GhM_D08G2545.1,GhM_A13G2977.1,GhM_D13G2881.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G59920||AT5G09550 | RAB GDP-dissociation inhibitor||ATGDI2; ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2); RAB GDP-dissociation inhibitor | GO:0043087|regulation of GTPase activity;GO:0015031|protein transport;GO:0005093|RAB GDP-dissociation inhibitor activity;GO:0005575|cellular_component | GhM_A01G2861.1,GhM_D01G2788.1,GhM_A03G2351.1,GhM_D02G2370.1,GhM_A04G1494.1,GhM_D04G1985.1,GhM_A13G0565.1,GhM_D13G0550.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G08850 | RAPTOR1B, ATRAPTOR1B, RAPTOR1; RAPTOR1; nucleotide binding / protein binding | GO:0000166|nucleotide binding;GO:0005515|protein binding;GO:0009793|embryonic development ending in seed dormancy;GO:0016049|cell growth | GhM_A02G0059.1,GhM_D02G0066.1,GhM_A07G1287.1,GhM_A05G4726.1,GhM_D02G2832.1,GhM_A10G1842.1,GhM_D10G1293.1,GhM_A11G0002.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G43420 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0006694|steroid biosynthetic process;GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity;GO:0005886|plasma membrane | GhM_A02G0127.1,GhM_D02G0132.1,GhM_A05G3763.1,GhM_D05G3770.1,GhM_D01G0849.1,GhM_A10G1750.1,GhM_D10G1382.1,GhM_D01G0436.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G31510||AT1G65430 | IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)||zinc finger protein-related | GO:0005515|protein binding;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding | GhM_A02G0160.1,GhM_D02G0165.1,GhM_A11G3848.1,GhM_D11G3765.1,GhM_A13G1212.1,GhM_D13G1209.1,GhM_D09G2422.1,GhM_A09G2541.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G14780||AT1G28380 | NSL1; NSL1 (necrotic spotted lesions 1)||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24290.2); Has 119 Blast hits to 118 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0010337|regulation of salicylic acid metabolic process;GO:0003674|molecular_function;GO:0009626|plant-type hypersensitive response;GO:0009651|response to salt stress;GO:0052542|callose deposition during defense response;GO:0005575|cellular_component | GhM_A02G0171.1,GhM_D02G0176.1,GhM_A09G2526.1,GhM_D09G2408.1,GhM_A10G1653.1,GhM_D10G1478.1,GhM_D05G3612.1,GhM_D06G0991.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G22330 | ATCES1; ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | GO:0003824|catalytic activity;GO:0006672|ceramide metabolic process;GO:0016811|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A02G0246.1,GhM_D02G0241.1,GhM_A06G2639.1,GhM_D06G2626.1,GhM_A09G2497.1,GhM_D09G2380.1,GhM_A10G1541.1,GhM_D10G1573.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G04810||AT2G32730 | 26S proteasome regulatory subunit, putative | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0030234|enzyme regulator activity;GO:0005634|nucleus;GO:0005488|binding;GO:0008540|proteasome regulatory particle, base subcomplex;GO:0030163|protein catabolic process;GO:0005829|cytosol;GO:0005886|plasma membrane | GhM_A02G0279.1,GhM_D02G0301.1,GhM_A03G1243.1,GhM_D02G1453.1,GhM_A05G3769.1,GhM_D05G3766.1,GhM_A09G2482.1,GhM_D09G2367.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G24160 | PMP; PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN) | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A02G0281.1,GhM_D02G0303.1,GhM_A09G2474.1,GhM_D09G2361.1,GhM_A10G1505.1,GhM_D10G1615.1,GhM_D07G1614.1,GhM_D01G1688.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G06190 | ATBPM2, BPM2; BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding | GO:0005515|protein binding;GO:0006970|response to osmotic stress;GO:0005634|nucleus;GO:0042631|cellular response to water deprivation | GhM_A02G0295.1,GhM_D02G0318.1,GhM_A08G0573.1,GhM_D08G0545.1,GhM_A08G2413.1,GhM_A11G1416.1,GhM_D11G1405.1,GhM_D08G2358.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G63930 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0316.1,GhM_D02G0338.1,GhM_A09G2456.1,GhM_D09G2343.1,GhM_A11G3054.1,GhM_D11G2983.1,GhM_A08G2786.1,GhM_D08G2730.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G14240 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein-related (TAIR:AT4G14230.1); Has 6770 Blast hits to 6657 proteins in 1347 species: Archae - 62; Bacteria - 4461; Metazoa - 254; Fungi - 179; Plants - 121; Viruses - 0; Other Eukaryotes - 1693 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0323.1,GhM_D02G0345.1,GhM_A08G0577.1,GhM_D08G0548.1,GhM_A08G0874.1,GhM_D08G0829.1,GhM_A10G1365.1,GhM_D10G1750.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G14920||AT4G16760 | ACX1, ATACX1; ACX1 (ACYL-COA OXIDASE 1); acyl-CoA oxidase||DNA binding / protein binding / zinc ion binding | GO:0009695|jasmonic acid biosynthetic process;GO:0005515|protein binding;GO:0005777|peroxisome;GO:0009620|response to fungus;GO:0003997|acyl-CoA oxidase activity;GO:0009555|pollen development;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0009611|response to wounding;GO:0001676|long-chain fatty acid metabolic process;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0002213|defense response to insect;GO:0006635|fatty acid beta-oxidation;GO:0008270|zinc ion binding | GhM_A02G0347.1,GhM_D02G0370.1,GhM_A09G2651.1,GhM_D09G2533.1,GhM_A09G2662.1,GhM_A07G1895.1,GhM_A07G2766.1,GhM_A09G1527.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G63410 | APG1, VTE3, IEP37, E37; APG1 (ALBINO OR PALE GREEN MUTANT 1); 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase/ S-adenosylmethionine-dependent methyltransferase/ methyltransferase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0010189|vitamin E biosynthetic process;GO:0008168|methyltransferase activity;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0010236|plastoquinone biosynthetic process;GO:0009706|chloroplast inner membrane;GO:0051741|2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | GhM_A02G0378.1,GhM_D02G0398.1,GhM_A08G0803.1,GhM_D08G0766.1,GhM_A10G1420.1,GhM_D10G1698.1,GhM_A11G1476.1,GhM_D11G1465.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G35890 | La domain-containing protein | GO:0009507|chloroplast | GhM_A02G0856.1,GhM_A02G2205.1,GhM_D03G0065.1,GhM_A09G0630.1,GhM_D11G1997.1,GhM_A11G2009.1,GhM_D11G0490.1,GhM_A11G0508.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G24560||AT5G65450 | UBP17; UBP17 (UBIQUITIN-SPECIFIC PROTEASE 17); cysteine-type endopeptidase/ ubiquitin thiolesterase/ zinc ion binding||UBP16; UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16); ubiquitin thiolesterase/ ubiquitin-specific protease/ zinc ion binding | GO:0012505|endomembrane system;GO:0048364|root development;GO:0048367|shoot development;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004221|ubiquitin thiolesterase activity;GO:0009908|flower development;GO:0005739|mitochondrion;GO:0048366|leaf development;GO:0008283|cell proliferation;GO:0008270|zinc ion binding | GhM_A02G0936.1,GhM_D02G0931.1,GhM_D02G1983.1,GhM_A06G0350.1,GhM_D06G0362.1,GhM_D03G0451.1,GhM_A02G1726.1,GhM_D12G2316.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G43460 | 60S ribosomal protein L38 (RPL38A) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A02G1049.1,GhM_A10G1743.1,GhM_A05G4170.1,GhM_D02G0126.1,GhM_A09G2566.1,GhM_D09G2446.1,GhM_D02G1273.1,GhM_D10G1390.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00020 | PSBA; Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | GO:0009579|thylakoid;GO:0016020|membrane | GhM_A02G1053.1,GhM_A08G1348.1,GhM_A04G1559.1,GhM_D12G1433.1,GhM_A04G1640.1,GhM_D03G1913.1,GhM_D07G2283.1,GhM_D01G1898.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G33120||AT4G10450 | 60S ribosomal protein L9 (RPL90D)||60S ribosomal protein L9 (RPL90B) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A02G1148.1,GhM_D03G1076.1,GhM_A08G1483.1,GhM_D08G1372.1,GhM_A11G0194.1,GhM_D11G0193.1,GhM_A12G2997.1,GhM_D12G2884.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G18196 | metal ion binding | GO:0005575|cellular_component | GhM_A02G1154.1,GhM_A08G1478.1,GhM_D08G1379.1,GhM_A12G2989.1,GhM_A09G2273.1,GhM_D09G2178.1,GhM_D03G1070.1,GhM_D12G2875.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G11280 | ACS6; ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6); 1-aminocyclopropane-1-carboxylate synthase | GO:0009693|ethylene biosynthetic process;GO:0005515|protein binding;GO:0008631|induction of apoptosis by oxidative stress;GO:0009733|response to auxin stimulus;GO:0009611|response to wounding;GO:0009612|response to mechanical stimulus;GO:0009753|response to jasmonic acid stimulus;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0009723|response to ethylene stimulus;GO:0005575|cellular_component;GO:0009605|response to external stimulus | GhM_A02G1313.1,GhM_D03G0930.1,GhM_A08G1548.1,GhM_D08G1503.1,GhM_A11G0255.1,GhM_D11G0251.1,GhM_A12G2872.1,GhM_D12G2763.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G42130||AT4G04640 | ATPC1; ATPC1; enzyme regulator||mitochondrial substrate carrier family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0030234|enzyme regulator activity;GO:0006810|transport;GO:0009772|photosynthetic electron transport in photosystem II;GO:0005488|binding;GO:0006754|ATP biosynthetic process;GO:0009544|chloroplast ATP synthase complex;GO:0009579|thylakoid;GO:0006839|mitochondrial transport;GO:0009535|chloroplast thylakoid membrane;GO:0015986|ATP synthesis coupled proton transport;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A02G1363.1,GhM_D03G0782.1,GhM_A08G0488.1,GhM_D08G0471.1,GhM_D08G1567.1,GhM_D12G0226.1,GhM_A10G0139.1,GhM_D10G0129.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G21540||AT5G16340||AT5G16370 | AAE5; AAE5 (ACYL ACTIVATING ENZYME 5); catalytic||AMP-binding protein, putative | GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity | GhM_A02G1384.1,GhM_A02G1399.1,GhM_D03G0742.1,GhM_D03G0759.1,GhM_D09G2358.1,GhM_A09G2472.1,GhM_A10G1492.1,GhM_D10G1623.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G57870 | eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | GO:0005515|protein binding;GO:0016070|RNA metabolic process;GO:0003723|RNA binding;GO:0003743|translation initiation factor activity;GO:0005488|binding;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0006412|translation;GO:0006413|translational initiation | GhM_A02G1491.1,GhM_D03G0688.1,GhM_A05G0102.1,GhM_D05G0106.1,GhM_A08G3047.1,GhM_D08G2977.1,GhM_A13G2702.1,GhM_D13G2590.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G29950 | transcription factor/ transcription regulator | GO:0005634|nucleus;GO:0045449|regulation of transcription | GhM_A02G1499.1,GhM_A04G0946.1,GhM_D06G1150.1,GhM_A06G2082.1,GhM_D10G2129.1,GhM_A10G0421.1,GhM_D10G0412.1,GhM_D04G2215.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G19480||AT5G56950 | NFA03, NFA3, NAP1;3; NAP1;3 (NUCLEOSOME ASSEMBLY PROTEIN 1;3); DNA binding||NFA02, NFA2, NAP1;2; NAP1;2 (NUCLEOSOME ASSEMBLY PROTEIN 1;2); DNA binding | GO:0006334|nucleosome assembly;GO:0005488|binding;GO:0005634|nucleus;GO:0006281|DNA repair;GO:0005737|cytoplasm;GO:0009294|DNA mediated transformation;GO:0003677|DNA binding | GhM_A02G1511.1,GhM_D03G0627.1,GhM_A06G0872.1,GhM_A05G0326.1,GhM_D05G0339.1,GhM_A07G0144.1,GhM_D07G0144.1,GhM_D06G0876.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G16270 | INVOLVED IN: intracellular protein transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), ENTH/VHS (InterPro:IPR008942); Has 113 Blast hits to 112 proteins in 49 species: Archae - 0; Bacteria - 3; Metazoa - 48; Fungi - 1; Plants - 23; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). | GO:0006886|intracellular protein transport;GO:0016020|membrane | GhM_A02G1559.1,GhM_D03G0673.1,GhM_A05G1453.1,GhM_D05G1467.1,GhM_A06G2446.1,GhM_D06G2444.1,GhM_D03G0958.1,GhM_D13G2289.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G52245||AT3G16120 | ||dynein light chain, putative | ;GO:0007017|microtubule-based process;GO:0005875|microtubule associated complex;GO:0003777|microtubule motor activity | GhM_A02G1577.1,GhM_D03G0796.1,GhM_A06G0756.1,GhM_D06G0757.1,GhM_A09G1107.1,GhM_D09G1037.1,GhM_D06G1176.1,GhM_A06G1148.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G19640 | ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, ATRAB-F2B, RAB-F2B; ARA7; GTP binding | GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005525|GTP binding;GO:0005768|endosome | GhM_A02G1586.1,GhM_D03G0804.1,GhM_A05G0246.1,GhM_D05G0254.1,GhM_A06G0727.1,GhM_D06G0730.1,GhM_A07G0081.1,GhM_D07G0063.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G79985 | - | - | GhM_A02G1590.1,GhM_A10G0885.1,GhM_A05G1415.1,GhM_D05G1431.1,GhM_A09G1120.1,GhM_Scaf046G179.1,GhM_D02G1189.1,GhM_D03G0807.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G80410||AT1G54490 | EMB2753; EMB2753 (EMBRYO DEFECTIVE 2753); binding||AIN1, EIN5, XRN4, ATXRN4; XRN4 (EXORIBONUCLEASE 4); 5'-3' exonuclease/ 5'-3' exoribonuclease/ nucleic acid binding | GO:0009826|unidimensional cell growth;GO:0009630|gravitropism;GO:0009873|ethylene mediated signaling pathway;GO:0008409|5'-3' exonuclease activity;GO:0040029|regulation of gene expression, epigenetic;GO:0005488|binding;GO:0005634|nucleus;GO:0009961|response to 1-Aminocyclopropane-1-carboxylic Acid;GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA;GO:0003676|nucleic acid binding;GO:0009723|response to ethylene stimulus;GO:0016020|membrane;GO:0000291|nuclear-transcribed mRNA catabolic process, exonucleolytic;GO:0004534|5'-3' exoribonuclease activity | GhM_A02G1604.1,GhM_D10G0766.1,GhM_A05G1410.1,GhM_D05G1423.1,GhM_A10G0875.1,GhM_D03G0818.1,GhM_D08G1550.1,GhM_D06G0298.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G80300 | NTT1, ATNTT1; NTT1 (NUCLEOTIDE TRANSPORTER 1); ATP:ADP antiporter | GO:0009941|chloroplast envelope;GO:0016020|membrane;GO:0006810|transport;GO:0005471|ATP:ADP antiporter activity | GhM_A02G1629.1,GhM_D03G0827.1,GhM_A05G1375.1,GhM_D05G1385.1,GhM_A06G2427.1,GhM_D10G0780.1,GhM_A10G0862.1,GhM_D06G2425.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G39390||AT1G34020 | transporter-related||ATNST-KT1, NST-K1; NST-K1 (NUCLEOTIDE SUGAR TRANSPORTER-KT 1); nucleotide-sugar transmembrane transporter | GO:0015780|nucleotide-sugar transport;GO:0000139|Golgi membrane;GO:0005338|nucleotide-sugar transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A02G1780.1,GhM_D03G0504.1,GhM_A05G2759.1,GhM_D05G2762.1,GhM_A05G3050.1,GhM_D05G3050.1,GhM_A11G0648.1,GhM_D11G0657.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G03050||AT5G16910||AT4G38190 | ATCSLD2, CSLD2; CSLD2 (CELLULOSE-SYNTHASE LIKE D2); cellulose synthase/ transferase, transferring glycosyl groups||CSLD3, KJK, ATCSLD3; CSLD3 (CELLULOSE SYNTHASE-LIKE D3); cellulose synthase/ transferase, transferring glycosyl groups||ATCSLD4, CSLD4; ATCSLD4; cellulose synthase/ transferase, transferring glycosyl groups | GO:0009846|pollen germination;GO:0016759|cellulose synthase activity;GO:0010583|response to cyclopentenone;GO:0048767|root hair elongation;GO:0005794|Golgi apparatus;GO:0000271|polysaccharide biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0030173|integral to Golgi membrane;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005783|endoplasmic reticulum;GO:0009409|response to cold | GhM_A02G1827.1,GhM_D03G0557.1,GhM_A04G1439.1,GhM_D04G1926.1,GhM_A08G2866.1,GhM_D08G2809.1,GhM_A12G2596.1,GhM_D12G2484.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G22360||AT4G39960 | DNAJ heat shock family protein | GO:0051082|unfolded protein binding;GO:0009507|chloroplast;GO:0005524|ATP binding;GO:0009408|response to heat;GO:0006457|protein folding;GO:0009535|chloroplast thylakoid membrane;GO:0031072|heat shock protein binding | GhM_A02G1853.1,GhM_D03G0410.1,GhM_A12G0947.1,GhM_D12G0841.1,GhM_A12G0948.1,GhM_A12G0164.1,GhM_D12G0171.1,GhM_D12G0840.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G49700||AT4G37770 | ETO3, ACS9; ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9); 1-aminocyclopropane-1-carboxylate synthase||ACS8; ACS8; 1-aminocyclopropane-1-carboxylate synthase | GO:0009693|ethylene biosynthetic process;GO:0005515|protein binding;GO:0006417|regulation of translation;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0005575|cellular_component | GhM_A02G1939.1,GhM_D03G0329.1,GhM_A10G1013.1,GhM_D10G1070.1,GhM_A11G0594.1,GhM_D11G0590.1,GhM_A11G2516.1,GhM_D11G2375.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G23150||AT1G47240 | NRAMP3, ATNRAMP3; NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3); inorganic anion transmembrane transporter/ manganese ion transmembrane transporter/ metal ion transmembrane transporter||NRAMP2, ATNRAMP2; NRAMP2; inorganic anion transmembrane transporter/ metal ion transmembrane transporter | GO:0006875|cellular metal ion homeostasis;GO:0015103|inorganic anion transmembrane transporter activity;GO:0046873|metal ion transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0030001|metal ion transport;GO:0005773|vacuole | GhM_A02G1993.1,GhM_D03G0275.1,GhM_A05G2333.1,GhM_D05G2348.1,GhM_A11G2605.1,GhM_D11G2297.1,GhM_D12G1062.1,GhM_A12G0912.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G36830||AT1G75000 | GNS1/SUR4 membrane family protein | GO:0008150|biological_process;GO:0016021|integral to membrane;GO:0003674|molecular_function | GhM_A02G2088.1,GhM_D03G0173.1,GhM_A11G2179.1,GhM_D11G2153.1,GhM_D06G0125.1,GhM_A03G1561.1,GhM_D02G1040.1,GhM_A06G0127.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G65650 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G2111.1,GhM_D03G0157.1,GhM_A11G2161.1,GhM_D11G2135.1,GhM_D05G2203.1,GhM_A05G2178.1,GhM_A06G0111.1,GhM_D06G0109.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G21320 | zinc finger (B-box type) family protein | GO:0012505|endomembrane system;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A02G2163.1,GhM_D03G0110.1,GhM_A11G2073.1,GhM_A10G1117.1,GhM_D10G0979.1,GhM_D11G2052.1,GhM_A12G0693.1,GhM_D12G0688.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G35840||AT2G17730 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0009299|mRNA transcription;GO:0009416|response to light stimulus;GO:0031351|integral to plastid membrane;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A02G2212.1,GhM_D03G0058.1,GhM_A11G0505.1,GhM_D11G0487.1,GhM_A11G1998.1,GhM_D11G1988.1,GhM_A12G0667.1,GhM_D12G0667.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G17220 | protein kinase, putative | GO:0004713|protein tyrosine kinase activity | GhM_A02G2249.1,GhM_D03G0022.1,GhM_A03G2265.1,GhM_D02G2293.1,GhM_A12G0144.1,GhM_D12G0152.1,GhM_A13G0771.1,GhM_D13G0616.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G46860||AT4G17730 | SYP23, ATSYP23; SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor||VAM3, ATVAM3, SYP22, ATSYP22, SGR3; VAM3; SNAP receptor | GO:0006944|cellular membrane fusion;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0005773|vacuole;GO:0005484|SNAP receptor activity | GhM_A03G0051.1,GhM_D03G2052.1,GhM_A08G2059.1,GhM_D12G2496.1,GhM_A09G2437.1,GhM_D09G2320.1,GhM_A12G2609.1,GhM_D08G2007.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G17980 | anac071; anac071 (Arabidopsis NAC domain containing protein 71); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_A03G0081.1,GhM_D03G2020.1,GhM_A08G2094.1,GhM_D08G2048.1,GhM_A12G2640.1,GhM_D12G2529.1,GhM_D11G0320.1,GhM_A11G0333.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G32450 | NRT1.5; NRT1.5 (NITRATE TRANSPORTER 1.5); nitrate transmembrane transporter/ transporter | GO:0015112|nitrate transmembrane transporter activity;GO:0010167|response to nitrate;GO:0015706|nitrate transport;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A03G0086.1,GhM_D03G2016.1,GhM_A06G2075.1,GhM_D06G2061.1,GhM_A08G2102.1,GhM_D08G2055.1,GhM_A13G0146.1,GhM_D13G0143.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G47100||AT4G17615 | CBL1, ATCBL1, SCABP5; CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding||CBL9; CBL9; calcium ion binding | GO:0006950|response to stress;GO:0005509|calcium ion binding;GO:0010107|potassium ion import;GO:0006970|response to osmotic stress;GO:0008287|protein serine/threonine phosphatase complex;GO:0006499|N-terminal protein myristoylation;GO:0005737|cytoplasm;GO:0010118|stomatal movement;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0009738|abscisic acid mediated signaling pathway;GO:0009409|response to cold | GhM_A03G0103.1,GhM_D03G1998.1,GhM_A09G2396.1,GhM_D09G2285.1,GhM_A11G0323.1,GhM_D11G0310.1,GhM_D08G2098.1,GhM_A08G2142.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G16820 | lipase class 3 family protein | GO:0004806|triglyceride lipase activity;GO:0006629|lipid metabolic process | GhM_A03G0129.1,GhM_D03G1976.1,GhM_A08G2178.1,GhM_D08G2133.1,GhM_A11G0315.1,GhM_D11G0300.1,GhM_A12G2688.1,GhM_D12G2576.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G22620||AT4G12410 | auxin-responsive family protein | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_A03G0187.1,GhM_D03G1912.1,GhM_A08G2256.1,GhM_D08G2206.1,GhM_A12G2730.1,GhM_A09G2375.1,GhM_D09G2263.1,GhM_D12G2617.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G12440||AT4G12040 | zinc finger (AN1-like) family protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A03G0198.1,GhM_D03G1902.1,GhM_A09G0367.1,GhM_D09G0338.1,GhM_A09G2364.1,GhM_D09G2251.1,GhM_A12G2778.1,GhM_D12G2665.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G12420 | ACR8; ACR8; amino acid binding | GO:0009737|response to abscisic acid stimulus;GO:0005575|cellular_component;GO:0016597|amino acid binding | GhM_A03G0207.1,GhM_D03G1896.1,GhM_A08G2286.1,GhM_D08G2239.1,GhM_A09G2367.1,GhM_D09G2254.1,GhM_A11G0232.1,GhM_D11G0226.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G61230||AT2G39900||AT2G45800 | LIM domain-containing protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A03G0282.1,GhM_D03G1840.1,GhM_A11G0245.1,GhM_D08G2302.1,GhM_A08G2355.1,GhM_A12G2822.1,GhM_D12G2711.1,GhM_D11G0239.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G63850 | PRLI-interacting factor-related | GO:0008150|biological_process;GO:0005515|protein binding | GhM_A03G0323.1,GhM_D03G1800.1,GhM_A08G1574.1,GhM_D08G1523.1,GhM_A09G2325.1,GhM_D09G2227.1,GhM_A12G2860.1,GhM_D12G2749.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G25740||AT5G52650 | 40S ribosomal protein S10 (RPS10A)||40S ribosomal protein S10 (RPS10C) | GO:0022626|cytosolic ribosome;GO:0005618|cell wall;GO:0022627|cytosolic small ribosomal subunit;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane | GhM_A03G0331.1,GhM_D03G1794.1,GhM_A08G1558.1,GhM_D09G2226.1,GhM_A09G0622.1,GhM_D09G0570.1,GhM_A09G2324.1,GhM_D08G1511.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G40470 | LBD15; LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15) | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_A03G0368.1,GhM_D03G1758.1,GhM_A05G3153.1,GhM_D05G3156.1,GhM_A05G4763.1,GhM_D04G0171.1,GhM_A13G0069.1,GhM_D13G0073.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G30160||AT1G07030 | mitochondrial substrate carrier family protein | GO:0006810|transport;GO:0005488|binding;GO:0006839|mitochondrial transport;GO:0016020|membrane;GO:0005215|transporter activity;GO:0005743|mitochondrial inner membrane | GhM_A03G0391.1,GhM_D03G1733.1,GhM_A05G1201.1,GhM_D05G1220.1,GhM_A09G2061.1,GhM_D09G1966.1,GhM_A13G2991.1,GhM_D13G2900.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G30020 | protein phosphatase 2C, putative / PP2C, putative | GO:0009507|chloroplast;GO:0009620|response to fungus;GO:0008287|protein serine/threonine phosphatase complex;GO:0009611|response to wounding;GO:0004722|protein serine/threonine phosphatase activity;GO:0050832|defense response to fungus | GhM_A03G0419.1,GhM_D03G1709.1,GhM_A08G2601.1,GhM_D08G2543.1,GhM_A13G2975.1,GhM_D13G2879.1,GhM_D05G1202.1,GhM_A05G1184.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G60690 | REV, IFL, IFL1; REV (REVOLUTA); DNA binding / lipid binding / transcription factor | GO:0030154|cell differentiation;GO:0009944|polarity specification of adaxial/abaxial axis;GO:0009855|determination of bilateral symmetry;GO:0010051|xylem and phloem pattern formation;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0008289|lipid binding;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009956|radial pattern formation;GO:0010014|meristem initiation | GhM_A03G0469.1,GhM_D03G1661.1,GhM_A05G1141.1,GhM_D05G1158.1,GhM_A08G2568.1,GhM_D08G2503.1,GhM_A13G2947.1,GhM_D13G2850.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G59300 | UBC7, ATUBC7; UBC7 (UBIQUITIN CARRIER PROTEIN 7); protein binding / ubiquitin-protein ligase | GO:0005515|protein binding;GO:0005622|intracellular;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004842|ubiquitin-protein ligase activity | GhM_A03G0564.1,GhM_D03G1566.1,GhM_A05G1065.1,GhM_D05G1079.1,GhM_A07G1168.1,GhM_D07G1150.1,GhM_A13G2920.1,GhM_D13G2819.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G29190 | APUM2; APUM2 (Arabidopsis Pumilio 2); RNA binding / binding | GO:0003729|mRNA binding;GO:0003723|RNA binding;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A03G0622.1,GhM_D03G1492.1,GhM_A05G1030.1,GhM_D05G1041.1,GhM_A07G1201.1,GhM_D07G1187.1,GhM_A08G0067.1,GhM_D08G0052.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G46960||AT4G13020 | MHK; MHK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ATP binding / ATP-dependent helicase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;GO:0005524|ATP binding;GO:0005773|vacuole | GhM_A03G0660.1,GhM_D03G1447.1,GhM_D03G1384.1,GhM_D10G2300.1,GhM_D07G2559.1,GhM_D04G0609.1,GhM_D07G1932.1,GhM_D09G0743.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G09200||AT2G40010 | 60S acidic ribosomal protein P0 (RPP0A)||60S acidic ribosomal protein P0 (RPP0B) | GO:0022626|cytosolic ribosome;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0006414|translational elongation;GO:0010043|response to zinc ion;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0009651|response to salt stress;GO:0005730|nucleolus;GO:0005829|cytosol;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0042254|ribosome biogenesis;GO:0009409|response to cold | GhM_A03G0683.1,GhM_D03G1424.1,GhM_A05G3885.1,GhM_D04G0797.1,GhM_A10G2937.1,GhM_D10G2898.1,GhM_A13G0197.1,GhM_D13G0187.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G24318 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | GhM_A03G0704.1,GhM_D03G1407.1,GhM_A08G1259.1,GhM_D08G1158.1,GhM_A09G2249.1,GhM_D09G2155.1,GhM_D07G2250.1,GhM_D10G0936.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G50180||AT5G40540||AT3G27560 | ATN1; ATN1; kinase/ protein serine/threonine kinase/ protein serine/threonine/tyrosine kinase/ protein tyrosine kinase||protein kinase, putative | GO:0004713|protein tyrosine kinase activity;GO:0005739|mitochondrion;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A03G0768.1,GhM_A07G2873.1,GhM_A05G4259.1,GhM_D04G0679.1,GhM_A09G0403.1,GhM_D07G2777.1,GhM_D03G1333.1,GhM_D09G0370.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G16900 | sugar binding / transferase, transferring glycosyl groups | GO:0006506|GPI anchor biosynthetic process;GO:0031227|intrinsic to endoplasmic reticulum membrane | GhM_A03G0890.1,GhM_A07G1961.1,GhM_A04G1270.1,GhM_A13G2003.1,GhM_A10G2461.1,GhM_D13G1902.1,GhM_A13G1696.1,GhM_A10G2462.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G61380 | TOC1, APRR1, PRR1; TOC1 (TIMING OF CAB EXPRESSION 1); transcription regulator/ two-component response regulator | GO:0030528|transcription regulator activity;GO:0005634|nucleus;GO:0010031|circumnutation;GO:0006355|regulation of transcription, DNA-dependent;GO:0007623|circadian rhythm;GO:0000156|two-component response regulator activity | GhM_A03G0908.1,GhM_D03G1148.1,GhM_D02G1531.1,GhM_D13G1017.1,GhM_D07G0940.1,GhM_D11G3453.1,GhM_D01G1487.1,GhM_D11G1289.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G15740 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0960.1,GhM_D03G1195.1,GhM_A07G0712.1,GhM_D07G0705.1,GhM_A07G2288.1,GhM_D07G2220.1,GhM_A11G0430.1,GhM_D11G0412.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G75220 | integral membrane protein, putative | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0055085|transmembrane transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity | GhM_A03G1038.1,GhM_D02G1055.1,GhM_A06G0103.1,GhM_D06G0100.1,GhM_A11G0538.1,GhM_D11G0524.1,GhM_A11G2137.1,GhM_D11G2112.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G45249 | ABF2, AREB1; ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2); DNA binding / protein binding / transcription activator/ transcription factor | GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0043193|positive regulation of gene-specific transcription;GO:0010255|glucose mediated signaling pathway;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway | GhM_A03G1087.1,GhM_D02G1001.1,GhM_A05G2281.1,GhM_D05G2298.1,GhM_A05G2930.1,GhM_D05G2944.1,GhM_A07G0210.1,GhM_D07G0211.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G18310 | unknown protein | GO:0008150|biological_process | GhM_A03G1143.1,GhM_D11G4024.1,GhM_A06G1895.1,GhM_D02G0670.1,GhM_A10G2251.1,GhM_A11G4133.1,GhM_A11G3496.1,GhM_D07G2301.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00900 | RPS7.1, RPS7; encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex | GO:0009507|chloroplast | GhM_A03G1156.1,GhM_A12G1627.1,GhM_A05G1590.1,GhM_D01G1510.1,GhM_A08G2600.1,GhM_D08G2541.1,GhM_D02G1476.1,GhM_A09G0681.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G32700 | LUH; WD-40 repeat family protein | GO:0003674|molecular_function;GO:0009908|flower development;GO:0016481|negative regulation of transcription;GO:0009790|embryonic development;GO:0005575|cellular_component | GhM_A03G1241.1,GhM_D02G1451.1,GhM_D10G1608.1,GhM_D10G1863.1,GhM_A07G2597.1,GhM_D07G2500.1,GhM_A11G1610.1,GhM_D11G1603.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G02860 | SUT2, ATSUC3, SUC3; SUT2 (SUCROSE TRANSPORTER 2); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | GO:0015144|carbohydrate transmembrane transporter activity;GO:0009611|response to wounding;GO:0008515|sucrose transmembrane transporter activity;GO:0008506|sucrose:hydrogen symporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0015770|sucrose transport | GhM_A03G1322.1,GhM_D02G1462.1,GhM_A03G1323.1,GhM_D13G0812.1,GhM_A03G1324.1,GhM_A13G0873.1,GhM_A12G2133.1,GhM_D12G2041.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00490 | RBCL; large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | GO:0022626|cytosolic ribosome;GO:0009941|chloroplast envelope;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005618|cell wall;GO:0016020|membrane | GhM_A03G1573.1,GhM_Scaf185G311.1,GhM_A04G0774.1,GhM_A07G2073.1,GhM_A10G2075.1,GhM_A13G1394.1,GhM_D09G0160.1,GhM_A12G2276.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G23800||AT3G48000 | ALDH2B4, ALDH2, ALDH2A; ALDH2B4 (ALDEHYDE DEHYDROGENASE 2B4); 3-chloroallyl aldehyde dehydrogenase/ ATP binding / aldehyde dehydrogenase (NAD)||ALDH2B7, ALDH2B; ALDH2B7; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) | GO:0004029|aldehyde dehydrogenase (NAD) activity;GO:0004028|3-chloroallyl aldehyde dehydrogenase activity;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0005524|ATP binding | GhM_A03G1898.1,GhM_D02G1952.1,GhM_A07G2819.1,GhM_D07G2729.1,GhM_A12G1864.1,GhM_D12G1799.1,GhM_A12G3337.1,GhM_D12G3223.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G15900 | phox (PX) domain-containing protein | GO:0007165|signal transduction;GO:0035091|phosphoinositide binding;GO:0005575|cellular_component | GhM_A03G2020.1,GhM_D13G0396.1,GhM_A04G1582.1,GhM_D04G2058.1,GhM_A10G1188.1,GhM_A12G0287.1,GhM_D12G0292.1,GhM_A13G0414.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G20780 | mannitol transporter, putative | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0055085|transmembrane transport;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane | GhM_A03G2112.1,GhM_Scaf116G272.1,GhM_A04G1354.1,GhM_D04G1840.1,GhM_A12G1802.1,GhM_D02G2138.1,GhM_A09G0991.1,GhM_D09G0927.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G19950 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A03G2209.1,GhM_D04G1892.1,GhM_A04G1404.1,GhM_D12G1676.1,GhM_A12G1726.1,GhM_A13G0712.1,GhM_D13G0665.1,GhM_D02G2236.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G50360||AT3G19960 | ATM1; ATM1 (ARABIDOPSIS THALIANA MYOSIN 1); motor||VIIIA, ATVIIIA; VIIIA; motor | GO:0030048|actin filament-based movement;GO:0016459|myosin complex;GO:0009524|phragmoplast;GO:0009504|cell plate;GO:0005886|plasma membrane;GO:0003774|motor activity | GhM_A03G2216.1,GhM_D02G2242.1,GhM_A12G1716.1,GhM_D13G0660.1,GhM_A13G0719.1,GhM_D12G1665.1,GhM_D12G1664.1,GhM_D12G1666.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G08520 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_A03G2226.1,GhM_D02G2250.1,GhM_A04G1415.1,GhM_D04G1900.1,GhM_A13G0728.1,GhM_D13G0654.1,GhM_A12G1721.1,GhM_D12G1670.1 | 8 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G2332.1,GhM_D02G2363.1,GhM_A05G2476.1,GhM_D05G2489.1,GhM_A05G2980.1,GhM_A06G0355.1,GhM_D05G2989.1,GhM_D06G0367.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G49340 | ATPI4K ALPHA; ATPI4K ALPHA; 1-phosphatidylinositol 4-kinase/ inositol or phosphatidylinositol kinase | GO:0005886|plasma membrane;GO:0004428|inositol or phosphatidylinositol kinase activity;GO:0004430|1-phosphatidylinositol 4-kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A03G2378.1,GhM_D02G2396.1,GhM_A04G1523.1,GhM_D04G2008.1,GhM_D07G1926.1,GhM_D01G1485.1,GhM_D04G1286.1,GhM_D10G2195.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G10200 | WLIM1; WLIM1; transcription factor/ zinc ion binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003700|transcription factor activity;GO:0008270|zinc ion binding | GhM_A03G2405.1,GhM_D02G2425.1,GhM_A04G1539.1,GhM_D04G2021.1,GhM_A06G0255.1,GhM_D06G0258.1,GhM_A12G3371.1,GhM_D12G3257.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G34050 | caffeoyl-CoA 3-O-methyltransferase, putative | GO:0046686|response to cadmium ion;GO:0005829|cytosol;GO:0042409|caffeoyl-CoA O-methyltransferase activity;GO:0009805|coumarin biosynthetic process | GhM_A03G2470.1,GhM_A13G0458.1,GhM_A04G1571.1,GhM_D04G2047.1,GhM_A12G0249.1,GhM_D13G0448.1,GhM_D12G0258.1,GhM_D12G0259.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G16400||AT4G34610 | BLH6; BLH6 (BELL1-LIKE HOMEODOMAIN 6); DNA binding / transcription factor||BLH7; BLH7 (bell1-like homeodomain 7); DNA binding / transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A03G2567.1,GhM_D02G2594.1,GhM_A12G0462.1,GhM_D12G0332.1,GhM_D02G2596.1,GhM_A13G0358.1,GhM_D13G0347.1,GhM_D02G2595.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G22840||AT4G10040 | CYTC-1, ATCYTC-A; CYTC-1 (CYTOCHROME C-1); electron carrier/ heme binding / iron ion binding||CYTC-2; CYTC-2 (cytochrome c-2); electron carrier/ heme binding / iron ion binding | GO:0005507|copper ion binding;GO:0005739|mitochondrion;GO:0008283|cell proliferation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0009055|electron carrier activity | GhM_A03G2791.1,GhM_D02G2797.1,GhM_A04G1763.1,GhM_D04G2240.1,GhM_A05G2841.1,GhM_D05G2842.1,GhM_A13G1588.1,GhM_D13G1471.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G62220 | exostosin family protein | GO:0003824|catalytic activity;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A04G0374.1,GhM_D05G3994.1,GhM_A11G0094.1,GhM_A06G2442.1,GhM_D04G1689.1,GhM_A12G3224.1,GhM_D12G3110.1,GhM_D11G0098.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G09830||AT2G39110 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A04G0958.1,GhM_D04G1411.1,GhM_A09G1856.1,GhM_D09G1753.1,GhM_A10G2593.1,GhM_A05G3355.1,GhM_D05G3328.1,GhM_D10G2506.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G23390 | 60S ribosomal protein L36a/L44 (RPL36aA) | GO:0005840|ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A04G1391.1,GhM_A12G1730.1,GhM_A13G0694.1,GhM_D04G1880.1,GhM_D12G1680.1,GhM_D08G1244.1,GhM_A12G1009.1,GhM_D13G0679.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G14900||AT2G39540 | gibberellin-regulated family protein | GO:0012505|endomembrane system;GO:0009739|response to gibberellin stimulus;GO:0003674|molecular_function | GhM_A04G1557.1,GhM_D04G2035.1,GhM_A06G0234.1,GhM_A05G2947.1,GhM_A05G2336.1,GhM_D05G2351.1,GhM_D05G2955.1,GhM_D06G0238.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G34200 | EDA9; EDA9 (embryo sac development arrest 9); ATP binding | GO:0009507|chloroplast;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A04G1562.1,GhM_D04G2039.1,GhM_A06G0224.1,GhM_D06G0228.1,GhM_A12G0243.1,GhM_D12G0250.1,GhM_A13G0478.1,GhM_D13G0464.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G02360||AT5G41670 | 6-phosphogluconate dehydrogenase family protein | GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0009750|response to fructose stimulus;GO:0009744|response to sucrose stimulus;GO:0005488|binding;GO:0046686|response to cadmium ion;GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0050661|NADP or NADPH binding;GO:0050662|coenzyme binding;GO:0009749|response to glucose stimulus;GO:0016491|oxidoreductase activity | GhM_A04G1891.1,GhM_D07G2210.1,GhM_A04G1892.1,GhM_A07G2282.1,GhM_D08G0638.1,GhM_A08G0669.1,GhM_A12G2894.1,GhM_D12G2784.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G26830||AT1G69670 | CUL3A, ATCUL3A, ATCUL3, CUL3; ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3); protein binding / ubiquitin-protein ligase||CUL3B, ATCUL3B; CUL3B (CULLIN 3B); protein binding / ubiquitin-protein ligase | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009639|response to red or far red light;GO:0009793|embryonic development ending in seed dormancy;GO:0000151|ubiquitin ligase complex;GO:0009911|positive regulation of flower development;GO:0007049|cell cycle;GO:0009960|endosperm development;GO:0004842|ubiquitin-protein ligase activity | GhM_A04G1924.1,GhM_D04G2394.1,GhM_A05G3516.1,GhM_D05G3466.1,GhM_A05G3517.1,GhM_A09G0240.1,GhM_A05G3518.1,GhM_D09G0216.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G24765||AT3G23760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferase, transferring glycosyl groups (TAIR:AT4G14100.1); Has 63 Blast hits to 60 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).||ARF3, ARL1, ATARL1; ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G0073.1,GhM_D05G0075.1,GhM_D05G0076.1,GhM_A05G0685.1,GhM_D05G0703.1,GhM_A08G1184.1,GhM_D08G1053.1,GhM_D11G2495.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G41040||AT2G12646 | methyltransferase-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734); BEST Arabidopsis thaliana protein match is: zinc-binding protein, putative (TAIR:AT3G60670.1); Has 191 Blast hits to 191 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 191; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008168|methyltransferase activity;GO:0010287|plastoglobule;GO:0005575|cellular_component | GhM_A05G0135.1,GhM_D05G0144.1,GhM_A06G0595.1,GhM_D06G0598.1,GhM_A08G1165.1,GhM_D08G1144.1,GhM_D08G2988.1,GhM_A08G3060.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G20350 | TIP1; TIP1 (TIP GROWTH DEFECTIVE 1); S-acyltransferase/ acyl binding | GO:0009651|response to salt stress;GO:0009932|cell tip growth;GO:0016417|S-acyltransferase activity;GO:0000035|acyl binding | GhM_A05G0142.1,GhM_D05G0150.1,GhM_A06G0606.1,GhM_D06G0604.1,GhM_A08G1203.1,GhM_D08G1130.1,GhM_A13G2643.1,GhM_D13G2547.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G26710 | BAS1, CYP734A1, CYP72B1; BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1); oxygen binding / steroid hydroxylase | GO:0012505|endomembrane system;GO:0009741|response to brassinosteroid stimulus;GO:0009416|response to light stimulus;GO:0019825|oxygen binding;GO:0010268|brassinosteroid homeostasis;GO:0008395|steroid hydroxylase activity;GO:0016131|brassinosteroid metabolic process | GhM_A05G0209.1,GhM_D05G0213.1,GhM_A06G0682.1,GhM_D06G0687.1,GhM_A07G0029.1,GhM_D07G0033.1,GhM_A08G3080.1,GhM_D08G3012.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G19660 | ATSBT6.1, S1P, ATS1P; S1P (SITE-1 PROTEASE); endopeptidase/ serine-type endopeptidase | GO:0004252|serine-type endopeptidase activity;GO:0042538|hyperosmotic salinity response;GO:0005794|Golgi apparatus;GO:0006972|hyperosmotic response;GO:0006508|proteolysis;GO:0005783|endoplasmic reticulum | GhM_A05G0255.1,GhM_D05G0264.1,GhM_A06G1519.1,GhM_A10G1838.1,GhM_A08G3103.1,GhM_D08G3033.1,GhM_A12G0270.1,GhM_D07G2086.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G29140 | MATE efflux protein-related | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A05G0280.1,GhM_D05G0290.1,GhM_A06G0802.1,GhM_D06G0806.1,GhM_A07G0104.1,GhM_D07G0106.1,GhM_A08G3124.1,GhM_D08G3050.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G19740||AT5G56710 | 60S ribosomal protein L31 (RPL31A)||60S ribosomal protein L31 (RPL31C) | GO:0022626|cytosolic ribosome;GO:0005618|cell wall;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0042254|ribosome biogenesis | GhM_A05G0299.1,GhM_D05G0315.1,GhM_A06G0831.1,GhM_D08G3064.1,GhM_A08G3139.1,GhM_A13G2559.1,GhM_D13G2472.1,GhM_D06G0838.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G29480||AT2G19680||AT4G26210 | mitochondrial ATP synthase g subunit family protein | GO:0000276|mitochondrial proton-transporting ATP synthase complex, coupling factor F(o);GO:0005739|mitochondrion;GO:0015078|hydrogen ion transmembrane transporter activity;GO:0015992|proton transport;GO:0015986|ATP synthesis coupled proton transport | GhM_A05G0308.1,GhM_D05G0320.1,GhM_A05G0473.1,GhM_D05G0497.1,GhM_A06G0841.1,GhM_D06G0846.1,GhM_A07G0123.1,GhM_D07G0122.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G57020||AT1G17520 | NMT1, ATNMT1; NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE); glycylpeptide N-tetradecanoyltransferase/ myristoyltransferase||DNA-binding protein, putative | GO:0010064|embryonic shoot morphogenesis;GO:0005634|nucleus;GO:0040007|growth;GO:0006499|N-terminal protein myristoylation;GO:0004379|glycylpeptide N-tetradecanoyltransferase activity;GO:0005840|ribosome;GO:0005829|cytosol;GO:0019107|myristoyltransferase activity;GO:0000786|nucleosome | GhM_A05G0334.1,GhM_D05G0348.1,GhM_A05G1524.1,GhM_D05G1540.1,GhM_A06G0878.1,GhM_D06G0884.1,GhM_A13G2545.1,GhM_D05G1541.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G19120||AT3G14080 | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | GO:0008150|biological_process;GO:0005634|nucleus;GO:0005732|small nucleolar ribonucleoprotein complex;GO:0003674|molecular_function | GhM_A05G0372.1,GhM_D05G0391.1,GhM_A05G1559.1,GhM_D05G1573.1,GhM_A06G0932.1,GhM_D06G0938.1,GhM_A07G0183.1,GhM_D07G0182.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G20820 | auxin-responsive protein-related | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_A05G0388.1,GhM_D05G0407.1,GhM_A06G0959.1,GhM_D06G0966.1,GhM_A07G0200.1,GhM_D07G0200.1,GhM_A13G2508.1,GhM_D13G2411.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G14270||AT4G33240 | phosphatidylinositol-4-phosphate 5-kinase family protein||1-phosphatidylinositol-4-phosphate 5-kinase/ ATP binding / phosphatidylinositol phosphate kinase/ protein binding / zinc ion binding | GO:0005515|protein binding;GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0035091|phosphoinositide binding;GO:0005739|mitochondrion;GO:0046488|phosphatidylinositol metabolic process;GO:0044267|cellular protein metabolic process;GO:0007165|signal transduction;GO:0016307|phosphatidylinositol phosphate kinase activity;GO:0008270|zinc ion binding;GO:0005524|ATP binding | GhM_A05G0398.1,GhM_D05G0416.1,GhM_A06G1016.1,GhM_D06G0999.1,GhM_A06G1018.1,GhM_A06G1019.1,GhM_A07G0205.1,GhM_D07G0205.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G21482 | CKX7, ATCKX5; CKX7 (CYTOKININ OXIDASE 7); cytokinin dehydrogenase/ oxidoreductase | GO:0009823|cytokinin catabolic process;GO:0019139|cytokinin dehydrogenase activity;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A05G0418.1,GhM_D05G0437.1,GhM_A06G1001.1,GhM_D06G1013.1,GhM_A08G3171.1,GhM_D08G3098.1,GhM_A13G2492.1,GhM_D13G2392.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G12010||AT4G29780 | unknown protein | GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A05G0437.1,GhM_D05G0458.1,GhM_A06G0881.1,GhM_D06G0887.1,GhM_D13G2457.1,GhM_A13G2544.1,GhM_A07G0246.1,GhM_D07G0247.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G33040 | glutaredoxin family protein | GO:0045454|cell redox homeostasis;GO:0015035|protein disulfide oxidoreductase activity;GO:0009055|electron carrier activity | GhM_A05G0450.1,GhM_D05G0473.1,GhM_A06G1047.1,GhM_D06G1056.1,GhM_A08G3177.1,GhM_D08G3104.1,GhM_A13G2485.1,GhM_D13G2383.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G15215||AT3G18380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding / transcription factor (TAIR:AT3G18380.1); Has 41 Blast hits to 40 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||sequence-specific DNA binding / transcription factor | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G0503.1,GhM_D05G0525.1,GhM_A13G2478.1,GhM_A06G1111.1,GhM_D06G1124.1,GhM_D13G2373.1,GhM_D06G0903.1,GhM_D07G1477.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G11500 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0530.1,GhM_D05G0547.1,GhM_A07G0311.1,GhM_D07G0310.1,GhM_A08G3202.1,GhM_D08G3135.1,GhM_A10G1582.1,GhM_D10G1527.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G31985 | 60S ribosomal protein L39 (RPL39C) | GO:0005840|ribosome;GO:0022625|cytosolic large ribosomal subunit | GhM_A05G0549.1,GhM_A07G0326.1,GhM_D07G0324.1,GhM_A08G3206.1,GhM_D08G3139.1,GhM_A13G2459.1,GhM_D13G2353.1,GhM_D05G0573.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G25350 | EBF2; EBF2 (EIN3-BINDING F BOX PROTEIN 2); protein binding | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0009723|response to ethylene stimulus | GhM_A05G0590.1,GhM_D05G0623.1,GhM_A06G1197.1,GhM_D06G1227.1,GhM_A07G0364.1,GhM_D07G0363.1,GhM_A13G2431.1,GhM_D13G2328.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G19400 | SMG7; SMG7 | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0779.1,GhM_D05G0803.1,GhM_A07G1447.1,GhM_D07G1422.1,GhM_A09G1418.1,GhM_D09G1330.1,GhM_A13G2825.1,GhM_D13G2710.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G26770 | plectin-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0803.1,GhM_D05G0825.1,GhM_A07G0028.1,GhM_D09G1308.1,GhM_A08G1514.1,GhM_A09G1399.1,GhM_D13G2718.1,GhM_A13G2838.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G06480||AT3G11780 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A05G0853.1,GhM_D05G0873.1,GhM_A07G1371.1,GhM_D07G1349.1,GhM_D07G2192.1,GhM_D06G1295.1,GhM_D13G1339.1,GhM_D07G2351.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G27600 | SKD1, VPS4; SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1); ATP binding / nucleoside-triphosphatase/ nucleotide binding | GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity | GhM_A05G0908.1,GhM_A09G1257.1,GhM_A07G1315.1,GhM_D07G1295.1,GhM_A08G0103.1,GhM_D08G0089.1,GhM_D05G0926.1,GhM_D09G1187.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G27100 | SE; SE (SERRATE); DNA binding / transcription factor | GO:0048367|shoot development;GO:0009507|chloroplast;GO:0031053|primary microRNA processing;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0048507|meristem development;GO:0010267|production of ta-siRNAs involved in RNA interference;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0003700|transcription factor activity;GO:0005829|cytosol;GO:0016607|nuclear speck;GO:0009955|adaxial/abaxial pattern formation;GO:0016568|chromatin modification | GhM_A05G1110.1,GhM_D05G1127.1,GhM_A08G0026.1,GhM_D08G0020.1,GhM_A08G2548.1,GhM_D08G2481.1,GhM_A13G2940.1,GhM_D13G2843.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G49840||AT5G53350||AT1G33360 | ATP-dependent Clp protease ATP-binding subunit ClpX, putative||ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding||CLPX; CLPX; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | GO:0005759|mitochondrial matrix;GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005739|mitochondrion;GO:0016887|ATPase activity;GO:0015031|protein transport;GO:0005524|ATP binding | GhM_A05G1214.1,GhM_D05G1234.1,GhM_A09G2241.1,GhM_A08G2949.1,GhM_D08G2889.1,GhM_D09G2148.1,GhM_A12G3072.1,GhM_D12G2955.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G51540 | INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005794|Golgi apparatus | GhM_A05G1264.1,GhM_D05G1281.1,GhM_A05G4043.1,GhM_D04G0934.1,GhM_A09G0469.1,GhM_D09G0429.1,GhM_A10G0041.1,GhM_D10G0030.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G79000 | HAC1, PCAT2, ATHPCAT2; HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1); H3/H4 histone acetyltransferase/ histone acetyltransferase/ transcription cofactor | GO:0006473|protein amino acid acetylation;GO:0005634|nucleus;GO:0009908|flower development;GO:0006355|regulation of transcription, DNA-dependent;GO:0009294|DNA mediated transformation;GO:0006358|regulation of transcription from RNA polymerase II promoter, global;GO:0003712|transcription cofactor activity;GO:0004402|histone acetyltransferase activity;GO:0048573|photoperiodism, flowering | GhM_A05G1294.1,GhM_D05G1310.1,GhM_A06G2376.1,GhM_D06G2384.1,GhM_A10G0025.1,GhM_D10G0016.1,GhM_D06G1454.1,GhM_D06G1453.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G80490||AT3G15880 | TPR1; TPR1 (TOPLESS-RELATED 1)||WSIP2, TPR4; protein binding | GO:0012505|endomembrane system;GO:0010072|primary shoot apical meristem specification;GO:0005515|protein binding;GO:0005829|cytosol | GhM_A05G1348.1,GhM_D05G1362.1,GhM_A06G0639.1,GhM_D06G0634.1,GhM_A06G2393.1,GhM_D06G2400.1,GhM_A09G1157.1,GhM_D09G1086.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G80230||AT3G15640 | cytochrome c oxidase family protein | GO:0005740|mitochondrial envelope;GO:0005739|mitochondrion;GO:0004129|cytochrome-c oxidase activity;GO:0046872|metal ion binding;GO:0050897|cobalt ion binding;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A05G1380.1,GhM_A10G0852.1,GhM_A06G1363.1,GhM_D06G1534.1,GhM_A06G2424.1,GhM_D06G2422.1,GhM_D05G1390.1,GhM_D10G0789.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G17500 | ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | GO:0008152|metabolic process;GO:0015914|phospholipid transport;GO:0006754|ATP biosynthetic process;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A05G1520.1,GhM_D05G1536.1,GhM_A05G4841.1,GhM_D04G0111.1,GhM_A09G1087.1,GhM_D09G1022.1,GhM_A10G0644.1,GhM_D10G0613.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G17290||AT1G72330 | AlaAT1; AlaAT1 (ALANINE AMINOTRANSFERAS); ATP binding / L-alanine:2-oxoglutarate aminotransferase||ALAAT2; ALAAT2 (ALANINE AMINOTRANSFERASE 2); ATP binding / L-alanine:2-oxoglutarate aminotransferase | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0019272|L-alanine biosynthetic process from pyruvate;GO:0006096|glycolysis;GO:0046686|response to cadmium ion;GO:0009058|biosynthetic process;GO:0004021|L-alanine:2-oxoglutarate aminotransferase activity;GO:0005739|mitochondrion;GO:0019481|L-alanine catabolic process, by transamination;GO:0005524|ATP binding;GO:0001666|response to hypoxia | GhM_A05G1582.1,GhM_D05G1597.1,GhM_A10G0559.1,GhM_D10G0534.1,GhM_D10G0734.1,GhM_D08G1041.1,GhM_D13G0677.1,GhM_D13G1849.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00730||ATCG00720 | PETD; A chloroplast gene encoding subunit IV of the cytochrome b6/f complex||PETB; Encodes the cytochrome b(6) subunit of the cytochrome b6f complex. | GO:0009055|electron carrier activity;GO:0009507|chloroplast;GO:0045156|electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity;GO:0016020|membrane;GO:0016491|oxidoreductase activity | GhM_A05G1591.1,GhM_A09G1342.1,GhM_A07G1595.1,GhM_Scaf236G363.1,GhM_A12G2279.1,GhM_D02G1376.1,GhM_A13G1120.1,GhM_D04G1750.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G19640 | ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, ATRAB-F2B, RAB-F2B; ARA7; GTP binding | GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0005525|GTP binding;GO:0005768|endosome | GhM_A05G1609.1,GhM_D05G1624.1,GhM_A06G1843.1,GhM_D06G1856.1,GhM_A06G2508.1,GhM_D06G2503.1,GhM_A09G1046.1,GhM_D09G0980.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G46170 | F-box family protein | GO:0010286|heat acclimation;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1648.1,GhM_D05G1659.1,GhM_A06G1821.1,GhM_D06G1804.1,GhM_A06G2519.1,GhM_D06G2513.1,GhM_A10G0469.1,GhM_D10G0449.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G46290 | KAS I; KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I); catalytic/ fatty-acid synthase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0006633|fatty acid biosynthetic process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0009058|biosynthetic process;GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0004312|fatty-acid synthase activity | GhM_A05G1675.1,GhM_D05G1685.1,GhM_A06G1798.1,GhM_D06G1782.1,GhM_A08G1436.1,GhM_D08G1420.1,GhM_A09G1064.1,GhM_D09G1000.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G61150 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif, subgroup (InterPro:IPR013720), CTLH, C-terminal to LisH motif (InterPro:IPR006595), LisH dimerisation motif (InterPro:IPR006594), CT11-RanBPM (InterPro:IPR013144); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11110.1); Has 740 Blast hits to 708 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 144; Plants - 139; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1838.1,GhM_D05G1851.1,GhM_A06G2595.1,GhM_D06G2586.1,GhM_A09G0986.1,GhM_D09G0922.1,GhM_A10G0249.1,GhM_D10G0234.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G11120 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1842.1,GhM_D05G1854.1,GhM_A06G1647.1,GhM_D06G1608.1,GhM_A10G0246.1,GhM_D10G0231.1,GhM_A13G0639.1,GhM_D13G0726.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G61850 | galactolipase/ phospholipase | GO:0009695|jasmonic acid biosynthetic process;GO:0004620|phospholipase activity;GO:0009620|response to fungus;GO:0005575|cellular_component;GO:0047714|galactolipase activity | GhM_A05G1901.1,GhM_D05G1913.1,GhM_A06G1951.1,GhM_D06G1931.1,GhM_A10G0162.1,GhM_D10G0149.1,GhM_D09G0895.1,GhM_A09G0962.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G22120||AT3G21620 | early-responsive to dehydration protein-related / ERD protein-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A05G1941.1,GhM_D05G1953.1,GhM_A07G2392.1,GhM_D07G2307.1,GhM_A10G0126.1,GhM_D10G0111.1,GhM_A11G1808.1,GhM_D11G1796.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G07880 | Rho GDP-dissociation inhibitor family protein | GO:0010053|root epidermal cell differentiation;GO:0009932|cell tip growth;GO:0005737|cytoplasm;GO:0005094|Rho GDP-dissociation inhibitor activity | GhM_A05G1963.1,GhM_D05G1972.1,GhM_A07G1047.1,GhM_D07G1035.1,GhM_A07G2440.1,GhM_D07G2347.1,GhM_A08G0644.1,GhM_D08G0613.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G16480||AT2G35740 | ATINT4, INT4; INT4 (INOSITOL TRANSPORTER 4); carbohydrate transmembrane transporter/ myo-inositol:hydrogen symporter/ sugar:hydrogen symporter||ATINT3, INT3; INT3 (NOSITOL TRANSPORTER 3); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005366|myo-inositol:hydrogen symporter activity;GO:0055085|transmembrane transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane | GhM_A05G1968.1,GhM_D05G1980.1,GhM_D10G0083.1,GhM_A05G3482.1,GhM_A06G2032.1,GhM_D06G2016.1,GhM_A10G0099.1,GhM_D05G3431.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G47550 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0000145|exocyst | GhM_A05G2211.1,GhM_D05G2231.1,GhM_A05G2913.1,GhM_D05G2929.1,GhM_D05G2927.1,GhM_D05G2928.1,GhM_A11G2634.1,GhM_D11G2619.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G22450||AT5G57815 | COX6B, ATCOX6B2; COX6B (CYTOCHROME C OXIDASE 6B); cytochrome-c oxidase||cytochrome c oxidase subunit 6b, putative | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0055114|oxidation reduction;GO:0005739|mitochondrion;GO:0009579|thylakoid;GO:0009651|response to salt stress;GO:0004129|cytochrome-c oxidase activity;GO:0009535|chloroplast thylakoid membrane | GhM_A05G2511.1,GhM_D05G2522.1,GhM_A05G2990.1,GhM_D05G2997.1,GhM_A08G1112.1,GhM_A05G4130.1,GhM_D04G1018.1,GhM_D08G1084.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G63090||AT3G27650 | LOB; LOB (LATERAL ORGAN BOUNDARIES)||LBD25; LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25) | GO:0008150|biological_process;GO:0010199|organ boundary specification between lateral organs and the meristem;GO:0005575|cellular_component | GhM_A05G2848.1,GhM_D05G2850.1,GhM_A09G0392.1,GhM_A05G4272.1,GhM_D04G0667.1,GhM_A11G0772.1,GhM_D11G0784.1,GhM_D09G0356.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G26910 | 60S ribosomal protein L10 (RPL10B) | GO:0009941|chloroplast envelope;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane | GhM_A05G3124.1,GhM_D05G3119.1,GhM_A05G4808.1,GhM_D04G0145.1,GhM_A10G2237.1,GhM_D10G2161.1,GhM_A13G2994.1,GhM_D13G2903.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G39390||AT3G09500 | 60S ribosomal protein L35 (RPL35B)||60S ribosomal protein L35 (RPL35A) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A05G3412.1,GhM_D05G3386.1,GhM_A08G0046.1,GhM_D08G0037.1,GhM_A10G2658.1,GhM_D10G2574.1,GhM_D03G1605.1,GhM_D13G1181.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G39630 | glycosyl transferase family 2 protein | GO:0006486|protein amino acid glycosylation;GO:0009058|biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005783|endoplasmic reticulum | GhM_A05G3447.1,GhM_D05G3416.1,GhM_A09G0758.1,GhM_D06G1009.1,GhM_A10G2775.1,GhM_D10G2707.1,GhM_A11G4113.1,GhM_D13G0180.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G55770||AT2G39900 | LIM domain-containing protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A05G3486.1,GhM_A13G0208.1,GhM_A06G2158.1,GhM_D06G2137.1,GhM_A10G2887.1,GhM_D10G2866.1,GhM_D05G3435.1,GhM_D13G0195.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G26850||AT4G18030 | dehydration-responsive family protein | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A05G3519.1,GhM_D05G3467.1,GhM_A07G0771.1,GhM_D07G0762.1,GhM_A12G2652.1,GhM_D12G2542.1,GhM_A13G0886.1,GhM_D13G0831.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G57870 | ATSK42; ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42); ATP binding / protein kinase/ protein serine/threonine kinase | GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G3766.1,GhM_A11G2673.1,GhM_A06G1393.1,GhM_D01G1601.1,GhM_A06G1944.1,GhM_A07G1711.1,GhM_Scaf001G035.1,GhM_Scaf051G200.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G40110 | yippee family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G3893.1,GhM_D04G0804.1,GhM_A09G2031.1,GhM_D09G1933.1,GhM_A11G4131.1,GhM_D11G4022.1,GhM_A13G0195.1,GhM_D13G0185.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G40095||AT3G55880 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G3894.1,GhM_D04G0805.1,GhM_A06G2145.1,GhM_D06G2126.1,GhM_A10G2948.1,GhM_D10G2909.1,GhM_A13G0192.1,GhM_D13G0182.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G27010 | AT-TCP20, PCF1, TCP20; AT-TCP20; transcription factor | GO:0009653|anatomical structure morphogenesis;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G4000.1,GhM_D04G0890.1,GhM_A07G2947.1,GhM_D07G2847.1,GhM_A09G0613.1,GhM_D09G0474.1,GhM_A10G0791.1,GhM_D10G0851.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G04800 | 40S ribosomal protein S17 (RPS17D) | GO:0005622|intracellular | GhM_A05G4269.1,GhM_D04G0669.1,GhM_A07G2858.1,GhM_D07G2763.1,GhM_A09G0394.1,GhM_D09G0358.1,GhM_A10G1166.1,GhM_D10G0931.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G27700 | RNA recognition motif (RRM)-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A05G4273.1,GhM_D04G0666.1,GhM_A09G0386.1,GhM_D09G0353.1,GhM_D11G0787.1,GhM_A11G0775.1,GhM_D11G0786.1,GhM_A11G0774.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G01150||AT5G53180 | PTB, ATPTB1, PTB1; PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1); RNA binding / nucleic acid binding / nucleotide binding||ATPTB2, PTB2; PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2); RNA binding / nucleic acid binding / nucleotide binding | GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0009846|pollen germination;GO:0005737|cytoplasm;GO:0003676|nucleic acid binding | GhM_A05G4395.1,GhM_D04G0549.1,GhM_A09G0168.1,GhM_A08G1237.1,GhM_D08G1307.1,GhM_A12G3087.1,GhM_D12G2972.1,GhM_D09G0165.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G29100||AT5G39510 | VTI13, ATVTI13; VTI13; SNARE binding / receptor||VTI11, ATVTI1A, ATVTI11, ZIG, SGR4, VTI1A; SGR4 (SHOOT GRAVITROPSIM 4); receptor | GO:0012505|endomembrane system;GO:0005770|late endosome;GO:0009630|gravitropism;GO:0004872|receptor activity;GO:0006944|cellular membrane fusion;GO:0005802|trans-Golgi network;GO:0005774|vacuolar membrane;GO:0006896|Golgi to vacuole transport;GO:0006623|protein targeting to vacuole;GO:0000149|SNARE binding;GO:0000325|plant-type vacuole;GO:0006891|intra-Golgi vesicle-mediated transport;GO:0005886|plasma membrane;GO:0030140|trans-Golgi network transport vesicle;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G4403.1,GhM_D04G0540.1,GhM_A07G2662.1,GhM_D07G2565.1,GhM_A11G0816.1,GhM_D11G0835.1,GhM_D11G0390.1,GhM_A11G0405.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G17230 | PSY; phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | GO:0016767|geranylgeranyl-diphosphate geranylgeranyltransferase activity;GO:0046905|phytoene synthase activity;GO:0009507|chloroplast;GO:0016117|carotenoid biosynthetic process | GhM_A05G4536.1,GhM_D04G0410.1,GhM_A07G0888.1,GhM_D07G0891.1,GhM_A09G0101.1,GhM_D09G0100.1,GhM_D06G1367.1,GhM_A06G1268.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G41310||AT3G57040 | ARR9, ATRR4; ARR9 (RESPONSE REGULATOR 9); transcription regulator/ two-component response regulator||ATRR3, ARR8; ATRR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator | GO:0030528|transcription regulator activity;GO:0009735|response to cytokinin stimulus;GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway;GO:0000160|two-component signal transduction system (phosphorelay);GO:0007623|circadian rhythm;GO:0000156|two-component response regulator activity | GhM_A05G4777.1,GhM_D04G0184.1,GhM_A10G2331.1,GhM_A06G0528.1,GhM_D06G0540.1,GhM_D10G2253.1,GhM_D13G0060.1,GhM_A13G0057.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G53460 | GLT1; GLT1; glutamate synthase (NADH) | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0009536|plastid;GO:0006537|glutamate biosynthetic process;GO:0042128|nitrate assimilation;GO:0009570|chloroplast stroma;GO:0016040|glutamate synthase (NADH) activity | GhM_A05G4909.1,GhM_A12G3080.1,GhM_A05G4910.1,GhM_D12G2963.1,GhM_A08G1227.1,GhM_D08G1210.1,GhM_D08G1208.1,GhM_D08G1209.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G53420 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27900.2); Has 863 Blast hits to 863 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 840; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4912.1,GhM_D04G0034.1,GhM_A08G1244.1,GhM_D08G1207.1,GhM_A11G0164.1,GhM_D11G0161.1,GhM_A12G3077.1,GhM_D12G2960.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G16110||AT3G02555 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G0574.1,GhM_D06G0579.1,GhM_A12G0599.1,GhM_A07G2243.1,GhM_D07G2165.1,GhM_D12G0597.1,GhM_A11G1903.1,GhM_D11G1893.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G17050||AT1G78510 | SPS2; SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase||SPS1; SPS1 (solanesyl diphosphate synthase 1); trans-octaprenyltranstransferase | GO:0006744|ubiquinone biosynthetic process;GO:0050347|trans-octaprenyltranstransferase activity;GO:0009507|chloroplast;GO:0005783|endoplasmic reticulum | GhM_A06G0601.1,GhM_A11G2643.1,GhM_A13G2036.1,GhM_A06G1141.1,GhM_A06G1790.1,GhM_A13G1816.1,GhM_A12G2251.1,GhM_D13G1926.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G26650 | AKT1, ATAKT1; AKT1 (ARABIDOPSIS K TRANSPORTER 1); cyclic nucleotide binding / inward rectifier potassium channel | GO:0030551|cyclic nucleotide binding;GO:0048767|root hair elongation;GO:0006813|potassium ion transport;GO:0009651|response to salt stress;GO:0005242|inward rectifier potassium channel activity;GO:0005886|plasma membrane | GhM_A06G0687.1,GhM_D06G0695.1,GhM_A07G0030.1,GhM_D07G0034.1,GhM_A13G2608.1,GhM_D13G2507.1,GhM_D08G3015.1,GhM_A08G3084.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G08510 | FATB; FATB (fatty acyl-ACP thioesterases B); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | GO:0016297|acyl-[acyl-carrier-protein] hydrolase activity;GO:0009536|plastid;GO:0000036|acyl carrier activity;GO:0006633|fatty acid biosynthetic process | GhM_A06G0712.1,GhM_D06G0714.1,GhM_A07G0037.1,GhM_D07G0041.1,GhM_A08G3093.1,GhM_D08G3023.1,GhM_A13G2585.1,GhM_D13G2498.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G13640 | ATPDAT, PDAT; ATPDAT; phosphatidylcholine-sterol O-acyltransferase | GO:0005773|vacuole | GhM_A06G0893.1,GhM_D06G0899.1,GhM_A08G3153.1,GhM_D08G3078.1,GhM_A09G1084.1,GhM_A06G2484.1,GhM_D06G2483.1,GhM_D09G1020.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G45550 | mob1/phocein family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005634|nucleus | GhM_A06G0901.1,GhM_D06G0912.1,GhM_A08G2013.1,GhM_D08G1966.1,GhM_A11G0359.1,GhM_D11G0344.1,GhM_A12G2575.1,GhM_D12G2460.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G74960 | FAB1, KAS2; FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase | GO:0009507|chloroplast | GhM_A06G0951.1,GhM_D06G0958.1,GhM_A06G0952.1,GhM_D08G3086.1,GhM_A08G3161.1,GhM_A10G0005.1,GhM_A13G2509.1,GhM_D13G2413.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G26030 | FC1, FC-I, ATFC-I; FC1 (ferrochelatase 1); ferrochelatase | GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0009536|plastid;GO:0033014|tetrapyrrole biosynthetic process;GO:0005739|mitochondrion;GO:0004325|ferrochelatase activity;GO:0006783|heme biosynthetic process | GhM_A06G1064.1,GhM_D06G1091.1,GhM_D07G1860.1,GhM_D01G1837.1,GhM_D11G3052.1,GhM_D02G1509.1,GhM_D04G0752.1,GhM_D07G1861.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G21820 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G1142.1,GhM_A07G2306.1,GhM_A08G1931.1,GhM_D03G0851.1,GhM_A11G2249.1,GhM_D11G2610.1,GhM_D03G0073.1,GhM_D05G3442.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G20280 | ATSPS1F; ATSPS1F (sucrose phosphate synthase 1F); sucrose-phosphate synthase/ transferase, transferring glycosyl groups | GO:0005985|sucrose metabolic process;GO:0009058|biosynthetic process;GO:0046524|sucrose-phosphate synthase activity;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A06G1213.1,GhM_D06G1240.1,GhM_A06G1214.1,GhM_A08G3224.1,GhM_D08G3155.1,GhM_A13G2637.1,GhM_D13G2541.1,GhM_D13G2644.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G18280 | ATAPY2, APY2; ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2); ATPase/ nucleotide diphosphatase | GO:0009846|pollen germination;GO:0016887|ATPase activity;GO:0017110|nucleoside-diphosphatase activity;GO:0005794|Golgi apparatus | GhM_A06G1658.1,GhM_A08G1117.1,GhM_A08G2300.1,GhM_A13G2216.1,GhM_A11G3021.1,GhM_D11G2949.1,GhM_A12G2421.1,GhM_A11G2428.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G58610 | ketol-acid reductoisomerase | GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009082|branched chain family amino acid biosynthetic process;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0004455|ketol-acid reductoisomerase activity;GO:0005618|cell wall | GhM_A06G1702.1,GhM_D06G1719.1,GhM_A07G0719.1,GhM_D07G0713.1,GhM_A10G0016.1,GhM_D10G0010.1,GhM_A10G0017.1,GhM_D02G0004.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G30040 | ATGA2OX2; ATGA2OX2 (GIBBERELLIN 2-OXIDASE); gibberellin 2-beta-dioxygenase | GO:0045487|gibberellin catabolic process;GO:0045543|gibberellin 2-beta-dioxygenase activity;GO:0010114|response to red light;GO:0009639|response to red or far red light | GhM_A06G1809.1,GhM_D06G1795.1,GhM_A06G2522.1,GhM_D06G2516.1,GhM_A10G0449.1,GhM_D10G0430.1,GhM_D09G0995.1,GhM_A09G1059.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G59740||AT1G33440 | proton-dependent oligopeptide transport (POT) family protein | GO:0009624|response to nematode;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A06G1909.1,GhM_D10G0891.1,GhM_A08G2960.1,GhM_D08G2898.1,GhM_A08G2959.1,GhM_A10G1986.1,GhM_D06G1895.1,GhM_D06G1894.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G55950 | CCR3, ATCRR3; CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3); kinase | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A06G2138.1,GhM_D06G2119.1,GhM_A10G2966.1,GhM_D10G2915.1,GhM_A13G0188.1,GhM_D13G0177.1,GhM_D05G3495.1,GhM_D06G1482.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G18240 | ATSS4, SSIV, SS4; ATSS4; transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009507|chloroplast;GO:0005982|starch metabolic process | GhM_A06G2534.1,GhM_D06G2527.1,GhM_A10G0418.1,GhM_D10G0407.1,GhM_D03G1038.1,GhM_D05G3159.1,GhM_D04G1521.1,GhM_D06G1449.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G47690 | binding | GO:0005488|binding;GO:0009507|chloroplast | GhM_A06G2661.1,GhM_D06G2648.1,GhM_A09G0944.1,GhM_D09G0880.1,GhM_D11G2849.1,GhM_D08G0605.1,GhM_D02G1309.1,GhM_D02G1734.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G50330||AT4G24810 | ABC1 family protein||ATP binding / protein kinase | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component | GhM_A07G0651.1,GhM_D07G0645.1,GhM_A07G0652.1,GhM_D09G2847.1,GhM_A07G2016.1,GhM_A11G2648.1,GhM_A09G2988.1,GhM_D01G1318.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G25600 | calcium ion binding | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005509|calcium ion binding | GhM_A07G0692.1,GhM_D07G0685.1,GhM_D12G2115.1,GhM_A12G2204.1,GhM_A12G2352.1,GhM_A11G0437.1,GhM_D11G0418.1,GhM_D12G2248.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G17850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: rhodanese-like domain-containing protein (TAIR:AT2G40760.1); Has 3833 Blast hits to 3832 proteins in 847 species: Archae - 0; Bacteria - 1695; Metazoa - 46; Fungi - 2; Plants - 52; Viruses - 0; Other Eukaryotes - 2038 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A07G0759.1,GhM_D07G0749.1,GhM_D06G2238.1,GhM_D03G0555.1,GhM_D03G1140.1,GhM_D08G1860.1,GhM_D03G1721.1,GhM_D05G3954.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G73830||AT1G25330||AT1G18400 | BEE3; BEE3 (BR ENHANCED EXPRESSION 3); DNA binding / transcription factor||BEE1; BEE1 (BR Enhanced Expression 1); transcription factor||basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A07G0796.1,GhM_D07G0794.1,GhM_D11G0061.1,GhM_A09G0703.1,GhM_D09G0650.1,GhM_A09G2160.1,GhM_D09G2074.1,GhM_A11G0061.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G48830 | 40S ribosomal protein S7 (RPS7A) | GO:0005886|plasma membrane;GO:0009507|chloroplast;GO:0005618|cell wall | GhM_A07G0797.1,GhM_D07G0796.1,GhM_A09G0705.1,GhM_D09G0652.1,GhM_A09G2159.1,GhM_D09G2073.1,GhM_A11G0059.1,GhM_D11G0060.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G49010 | ATBBC1, BBC1, RSU2; ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0005829|cytosol;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A07G0995.1,GhM_D07G0986.1,GhM_A07G2154.1,GhM_D07G2094.1,GhM_A08G0657.1,GhM_D08G0626.1,GhM_A11G1818.1,GhM_D11G1806.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G25120||AT4G13040 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein||AP2 domain-containing transcription factor family protein | GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005744|mitochondrial inner membrane presequence translocase complex;GO:0015031|protein transport;GO:0005743|mitochondrial inner membrane;GO:0008565|protein transporter activity | GhM_A07G1125.1,GhM_D07G1106.1,GhM_A07G1964.1,GhM_D07G1913.1,GhM_A07G2566.1,GhM_D07G2468.1,GhM_A11G1643.1,GhM_D11G1630.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G12470 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0009706|chloroplast inner membrane | GhM_A07G1494.1,GhM_D07G1463.1,GhM_A08G1917.1,GhM_D08G1871.1,GhM_A09G1456.1,GhM_D09G1360.1,GhM_A13G2805.1,GhM_D13G2691.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G47470 | ATPDIL2-1, UNE5, MEE30, PDI11, ATPDI11; UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | GO:0009505|plant-type cell wall;GO:0046686|response to cadmium ion;GO:0009793|embryonic development ending in seed dormancy;GO:0009553|embryo sac development;GO:0048868|pollen tube development;GO:0005886|plasma membrane;GO:0003756|protein disulfide isomerase activity;GO:0009567|double fertilization forming a zygote and endosperm;GO:0005783|endoplasmic reticulum | GhM_A07G1550.1,GhM_D07G1518.1,GhM_A08G1619.1,GhM_A08G0517.1,GhM_A12G1647.1,GhM_D12G1596.1,GhM_D08G1571.1,GhM_D11G1304.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G47440||AT4G02100 | DNAJ heat shock N-terminal domain-containing protein | GO:0005488|binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A07G1552.1,GhM_D07G1521.1,GhM_A08G1624.1,GhM_D08G1578.1,GhM_A11G1295.1,GhM_D11G1294.1,GhM_A12G1643.1,GhM_D12G1590.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G02640||AT5G49360 | BXL2, ATBXL2; BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds||BXL1, ATBXL1; BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds | GO:0005975|carbohydrate metabolic process;GO:0009505|plant-type cell wall;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast | GhM_A07G1559.1,GhM_D07G1525.1,GhM_A09G2869.1,GhM_D09G2742.1,GhM_A10G2149.1,GhM_D10G2084.1,GhM_D12G1589.1,GhM_A12G1642.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G47400||AT5G61310||AT3G62410 | cytochrome c oxidase subunit Vc, putative / COX5C, putative||CP12-1, CP12; CP12-1||CP12-2, CP12; CP12-2; protein binding | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0005746|mitochondrial respiratory chain;GO:0003674|molecular_function;GO:0009744|response to sucrose stimulus;GO:0019253|reductive pentose-phosphate cycle;GO:0009570|chloroplast stroma;GO:0009416|response to light stimulus;GO:0018316|peptide cross-linking via L-cystine;GO:0004129|cytochrome-c oxidase activity | GhM_A07G1566.1,GhM_D07G1532.1,GhM_A08G1629.1,GhM_D08G1584.1,GhM_A12G1622.1,GhM_D12G1578.1,GhM_D11G1286.1,GhM_A11G1288.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G02560 | CLPP5, NCLPP5, NCLPP1; CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009534|chloroplast thylakoid;GO:0004252|serine-type endopeptidase activity;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009840|chloroplastic endopeptidase Clp complex;GO:0018119|peptidyl-cysteine S-nitrosylation;GO:0009532|plastid stroma | GhM_A07G1567.1,GhM_D07G1533.1,GhM_A11G1282.1,GhM_D11G1280.1,GhM_A12G1616.1,GhM_D12G1571.1,GhM_D02G1160.1,GhM_D02G1545.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G46990||AT3G62100 | IAA30; IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30); transcription factor||IAA20; IAA20 (INDOLE-3-ACETIC ACID INDUCIBLE 20); transcription factor | GO:0048364|root development;GO:0009630|gravitropism;GO:0009507|chloroplast;GO:0009647|skotomorphogenesis;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010583|response to cyclopentenone;GO:0010262|somatic embryogenesis;GO:0003700|transcription factor activity;GO:0010588|cotyledon vascular tissue pattern formation | GhM_A07G1606.1,GhM_D07G1568.1,GhM_A12G1562.1,GhM_D12G1513.1,GhM_D08G1615.1,GhM_A08G1660.1,GhM_D11G1231.1,GhM_A11G1230.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G61690 | unknown protein | - | GhM_A07G1688.1,GhM_D07G1653.1,GhM_A08G0436.1,GhM_D08G0422.1,GhM_A11G1120.1,GhM_D11G1131.1,GhM_A12G1473.1,GhM_D12G1411.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G61460 | BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0010200|response to chitin;GO:0009741|response to brassinosteroid stimulus;GO:0008270|zinc ion binding | GhM_A07G1728.1,GhM_D07G1698.1,GhM_A08G1791.1,GhM_D08G1745.1,GhM_A11G1055.1,GhM_D11G1068.1,GhM_A12G1433.1,GhM_D12G1362.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G37600||AT3G53740 | 60S ribosomal protein L36 (RPL36B)||60S ribosomal protein L36 (RPL36A) | GO:0022626|cytosolic ribosome;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A07G1745.1,GhM_D07G1715.1,GhM_A08G1309.1,GhM_D08G1279.1,GhM_A09G0537.1,GhM_A12G3150.1,GhM_D12G3035.1,GhM_D09G0536.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G44940 | AP2 domain-containing transcription factor TINY, putative | GO:0009507|chloroplast | GhM_A07G1826.1,GhM_D07G1785.1,GhM_A11G0892.1,GhM_D11G0907.1,GhM_A08G1862.1,GhM_D08G1811.1,GhM_A12G1289.1,GhM_D12G1222.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G31200 | ADF6, ATADF6; ADF6 (ACTIN DEPOLYMERIZING FACTOR 6); actin binding | GO:0008150|biological_process;GO:0005622|intracellular;GO:0003779|actin binding | GhM_A07G1832.1,GhM_D07G1790.1,GhM_A09G0840.1,GhM_D09G0783.1,GhM_A09G2806.1,GhM_D09G2682.1,GhM_A11G1537.1,GhM_D11G1526.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G28530 | anac074; anac074 (Arabidopsis NAC domain containing protein 74); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_A07G1847.1,GhM_D07G1808.1,GhM_A07G2746.1,GhM_D07G2645.1,GhM_A08G2472.1,GhM_D08G2421.1,GhM_A11G1547.1,GhM_D11G1541.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G39740||AT3G25520 | ATL5, PGY3, OLI5, RPL5A; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome||OLI7, RPL5B; 60S ribosomal protein L5 (RPL5B) | GO:0022626|cytosolic ribosome;GO:0006913|nucleocytoplasmic transport;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0005730|nucleolus;GO:0008283|cell proliferation;GO:0016020|membrane;GO:0005773|vacuole;GO:0009965|leaf morphogenesis;GO:0022625|cytosolic large ribosomal subunit;GO:0005737|cytoplasm;GO:0006412|translation;GO:0042254|ribosome biogenesis;GO:0009955|adaxial/abaxial pattern formation;GO:0009507|chloroplast;GO:0008097|5S rRNA binding;GO:0005634|nucleus;GO:0005840|ribosome;GO:0010015|root morphogenesis | GhM_A07G2033.1,GhM_D07G1976.1,GhM_A07G2520.1,GhM_D08G0596.1,GhM_A08G0630.1,GhM_A10G1810.1,GhM_D10G1324.1,GhM_D06G0965.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G51550 | EXL3; EXL3 (EXORDIUM LIKE 3) | GO:0009505|plant-type cell wall;GO:0003674|molecular_function | GhM_A07G2619.1,GhM_D11G0087.1,GhM_A09G0654.1,GhM_D09G0601.1,GhM_A11G0083.1,GhM_D12G3129.1,GhM_A12G3241.1,GhM_D07G2519.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G01090 | AKIN10, SNRK1.1, KIN10; AKIN10 (Arabidopsis SNF1 kinase homolog 10); protein binding / protein kinase | GO:0000152|nuclear ubiquitin ligase complex;GO:0005515|protein binding;GO:0009594|detection of nutrient;GO:0006950|response to stress;GO:0004672|protein kinase activity;GO:0010050|vegetative phase change;GO:0010182|sugar mediated signaling pathway;GO:0010149|senescence;GO:0003006|reproductive developmental process;GO:0009738|abscisic acid mediated signaling pathway;GO:0004674|protein serine/threonine kinase activity | GhM_A07G2665.1,GhM_D07G2566.1,GhM_A09G0148.1,GhM_D09G0147.1,GhM_A11G0129.1,GhM_D11G0836.1,GhM_A11G0817.1,GhM_D11G0125.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G02590 | UNE12; UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009567|double fertilization forming a zygote and endosperm | GhM_A07G2685.1,GhM_D07G2582.1,GhM_A08G0790.1,GhM_D08G0756.1,GhM_A08G2446.1,GhM_D08G2396.1,GhM_A11G1492.1,GhM_D11G1479.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G01780 | LIM domain-containing protein | GO:0008150|biological_process;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A08G0424.1,GhM_D08G0411.1,GhM_A08G1771.1,GhM_D08G1724.1,GhM_A11G1006.1,GhM_D11G1021.1,GhM_A12G1395.1,GhM_D12G1338.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G46420 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0437.1,GhM_D08G0423.1,GhM_A08G1713.1,GhM_D08G1660.1,GhM_A11G1123.1,GhM_D11G1133.1,GhM_A12G1474.1,GhM_D12G1412.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G02450||AT2G47690 | NADH-ubiquinone oxidoreductase-related||glycine-rich protein | GO:0005747|mitochondrial respiratory chain complex I;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0009853|photorespiration;GO:0045271|respiratory chain complex I;GO:0005886|plasma membrane;GO:0031966|mitochondrial membrane | GhM_A08G0546.1,GhM_D08G0512.1,GhM_A08G0953.1,GhM_D08G0908.1,GhM_A12G1699.1,GhM_D12G1648.1,GhM_A12G1704.1,GhM_D12G1653.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G47850 | zinc finger (CCCH-type) family protein | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A08G0558.1,GhM_D08G0522.1,GhM_A08G0922.1,GhM_D08G0879.1,GhM_A11G1374.1,GhM_D11G1367.1,GhM_A12G0095.1,GhM_D12G0103.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G62980 | TIR1; TIR1 (TRANSPORT INHIBITOR RESPONSE 1); auxin binding / protein binding / ubiquitin-protein ligase | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0002237|response to molecule of bacterial origin;GO:0009733|response to auxin stimulus;GO:0010152|pollen maturation;GO:0000151|ubiquitin ligase complex;GO:0010011|auxin binding;GO:0048443|stamen development;GO:0004842|ubiquitin-protein ligase activity;GO:0016036|cellular response to phosphate starvation;GO:0010311|lateral root formation | GhM_A08G0561.1,GhM_D08G0526.1,GhM_A08G0913.1,GhM_D08G0867.1,GhM_A08G1587.1,GhM_D08G1536.1,GhM_A11G1384.1,GhM_D11G1374.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G60220 | ATL4; ATL4; protein binding / zinc ion binding | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A08G0717.1,GhM_D08G0685.1,GhM_A12G1323.1,GhM_D12G1259.1,GhM_D08G1843.1,GhM_A08G1891.1,GhM_D11G0878.1,GhM_A11G0863.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G02120 | VAD1; VAD1 (VASCULAR ASSOCIATED DEATH1) | GO:0009507|chloroplast;GO:0042742|defense response to bacterium;GO:0043069|negative regulation of programmed cell death | GhM_A08G0742.1,GhM_D08G1823.1,GhM_A08G1872.1,GhM_D12G1234.1,GhM_A12G1298.1,GhM_D12G1368.1,GhM_D08G0709.1,GhM_A08G0743.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G03080 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT3G22790.1); Has 169162 Blast hits to 69460 proteins in 2232 species: Archae - 2114; Bacteria - 24914; Metazoa - 82448; Fungi - 11850; Plants - 6375; Viruses - 760; Other Eukaryotes - 40701 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A08G0818.1,GhM_D08G0780.1,GhM_A08G2433.1,GhM_D08G2381.1,GhM_A11G1466.1,GhM_D11G1458.1,GhM_A12G0035.1,GhM_D12G0034.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G05560 | 60S ribosomal protein L22-2 (RPL22B) | GO:0005886|plasma membrane;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A08G0959.1,GhM_D08G0915.1,GhM_A11G1340.1,GhM_D11G1339.1,GhM_A11G3369.1,GhM_D11G3281.1,GhM_A12G1694.1,GhM_D12G1640.1 | 8 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A08G1301.1,GhM_D08G1290.1,GhM_A09G2219.1,GhM_D09G2126.1,GhM_A11G0137.1,GhM_D11G0133.1,GhM_A12G3137.1,GhM_D12G3023.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G46225||AT4G32940 | GAMMA-VPE, GAMMAVPE; GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME); cysteine-type endopeptidase||ABIL1; ABIL1 (Abi-1-like 1) | GO:0003674|molecular_function;GO:0010090|trichome morphogenesis;GO:0006624|vacuolar protein processing;GO:0000323|lytic vacuole;GO:0045010|actin nucleation;GO:0031209|SCAR complex;GO:0006508|proteolysis | GhM_A08G1731.1,GhM_D08G1689.1,GhM_A12G1452.1,GhM_D12G1390.1,GhM_D08G1479.1,GhM_D03G1084.1,GhM_D08G1203.1,GhM_D10G2175.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G00360||AT1G63710 | CYP86A7; CYP86A7; fatty acid (omega-1)-hydroxylase/ oxygen binding||CYP86A2, ATT1; CYP86A2 (CYTOCHROME P450 86 A2); fatty acid (omega-1)-hydroxylase/ oxygen binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008393|fatty acid (omega-1)-hydroxylase activity;GO:0006631|fatty acid metabolic process;GO:0019825|oxygen binding | GhM_A08G1787.1,GhM_D08G1742.1,GhM_A08G2392.1,GhM_D08G2337.1,GhM_A11G1039.1,GhM_D11G1052.1,GhM_A12G2850.1,GhM_D12G2736.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G55040 | zinc finger (Ran-binding) family protein | GO:0005634|nucleus;GO:0008270|zinc ion binding;GO:0005488|binding | GhM_A08G2702.1,GhM_D08G2642.1,GhM_D05G3529.1,GhM_D10G2265.1,GhM_D09G0387.1,GhM_A11G3337.1,GhM_D11G3251.1,GhM_D11G3164.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G05090 | transducin family protein / WD-40 repeat family protein | GO:0000166|nucleotide binding;GO:0010311|lateral root formation | GhM_A08G2744.1,GhM_D08G2687.1,GhM_A11G3229.1,GhM_D11G3152.1,GhM_A13G1442.1,GhM_D13G1340.1,GhM_A13G2296.1,GhM_D13G2183.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT2G02760 | ATUBC2, UBC2; ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0033523|histone H2B ubiquitination;GO:0009650|UV protection;GO:0004842|ubiquitin-protein ligase activity;GO:0010228|vegetative to reproductive phase transition of meristem | GhM_A08G2809.1,GhM_D08G2758.1,GhM_A11G2855.1,GhM_D11G2809.1,GhM_A12G2137.1,GhM_D12G2045.1,GhM_A12G2237.1,GhM_D12G2141.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G16560 | Per1-like family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A08G3007.1,GhM_D08G2939.1,GhM_A13G2053.1,GhM_A12G3197.1,GhM_A11G0102.1,GhM_D11G0105.1,GhM_D12G3084.1,GhM_D13G1944.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G39990||AT5G15050 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0008375|acetylglucosaminyltransferase activity;GO:0016051|carbohydrate biosynthetic process | GhM_A08G3071.1,GhM_D08G3001.1,GhM_A09G0307.1,GhM_D09G0275.1,GhM_A10G1152.1,GhM_D10G0947.1,GhM_A11G0797.1,GhM_D11G0816.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G17090 | CT-BMY, BAM3, BMY8; CT-BMY (CHLOROPLAST BETA-AMYLASE); beta-amylase | GO:0016161|beta-amylase activity;GO:0009570|chloroplast stroma;GO:0000024|maltose biosynthetic process;GO:0005983|starch catabolic process;GO:0009409|response to cold | GhM_A09G2400.1,GhM_A12G2666.1,GhM_A09G2401.1,GhM_D12G2556.1,GhM_A09G2402.1,GhM_D11G0313.1,GhM_A11G0326.1,GhM_D09G2289.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G67380||AT3G50000||AT2G23070 | CKA2, ATCKA2; CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase||CKA1, ATCKA1; CKA1 (CASEIN KINASE ALPHA 1); kinase||casein kinase II alpha chain, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A10G1029.1,GhM_D10G1058.1,GhM_A11G0585.1,GhM_D11G0580.1,GhM_A11G2576.1,GhM_D11G2323.1,GhM_A12G0901.1,GhM_D12G1053.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT4G37790 | HAT22; HAT22; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009735|response to cytokinin stimulus;GO:0006355|regulation of transcription, DNA-dependent | GhM_A10G1548.1,GhM_D10G1552.1,GhM_A11G0595.1,GhM_D11G0591.1,GhM_A11G2512.1,GhM_D11G2380.1,GhM_A12G1059.1,GhM_D12G0981.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G59820||AT1G65540 | calcium-binding mitochondrial protein-related||calcium-binding EF hand family protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0005509|calcium ion binding | GhM_A10G1829.1,GhM_D10G1303.1,GhM_A13G1060.1,GhM_D13G1158.1,GhM_D01G1171.1,GhM_D12G1448.1,GhM_D11G2763.1,GhM_D13G0823.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G05420 | ACBP4; ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding | GO:0005634|nucleus;GO:0005829|cytosol;GO:0000062|acyl-CoA binding;GO:0006869|lipid transport | GhM_A11G3347.1,GhM_D11G3261.1,GhM_A11G3736.1,GhM_D11G3658.1,GhM_A13G1487.1,GhM_D13G1371.1,GhM_A13G2331.1,GhM_D13G2220.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G27700 | structural constituent of ribosome | GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A11G3356.1,GhM_A13G2332.1,GhM_A11G3733.1,GhM_D11G3654.1,GhM_A13G1491.1,GhM_D11G3271.1,GhM_D13G2221.1,GhM_D13G1375.1 | 8 | 0 | Gossypium | Cotton | |||
| - | ATCG00810 | RPL22; encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex | GO:0009507|chloroplast | GhM_A12G0263.1,GhM_D02G2835.1,GhM_A13G1126.1,GhM_Scaf005G076.1,GhM_D03G0922.1,GhM_Scaf005G086.1,GhM_D11G0749.1,GhM_Scaf304G393.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G51120||AT2G28320 | DNA binding / nucleic acid binding / protein binding / zinc ion binding||pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein | GO:0005515|protein binding;GO:0016570|histone modification;GO:0005634|nucleus;GO:0035091|phosphoinositide binding;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0007165|signal transduction;GO:0006352|transcription initiation;GO:0005886|plasma membrane;GO:0008270|zinc ion binding | GhM_D01G0817.1,GhM_D09G1745.1,GhM_D03G1496.1,GhM_D01G1006.1,GhM_D09G0459.1,GhM_D06G1581.1,GhM_D13G1747.1,GhM_D06G1734.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G52210||AT1G04650 | unknown protein||mRNA capping enzyme family protein | GO:0005575|cellular_component;GO:0006370|mRNA capping;GO:0003674|molecular_function | GhM_D01G1539.1,GhM_D03G0625.1,GhM_D08G0530.1,GhM_D04G1147.1,GhM_D08G1273.1,GhM_D11G2219.1,GhM_D12G0861.1,GhM_D10G2446.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT1G37113 | unknown protein | GO:0009507|chloroplast | GhM_D02G1216.1,GhM_D04G0894.1,GhM_D04G1026.1,GhM_D12G1720.1,GhM_D11G2309.1,GhM_D13G0864.1,GhM_D07G0996.1,GhM_D11G2468.1 | 8 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D02G1351.1,GhM_D06G1593.1,GhM_D03G0832.1,GhM_D05G3740.1,GhM_D04G1105.1,GhM_D11G2791.1,GhM_D12G1365.1,GhM_D12G0933.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT5G24710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like (InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336 species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794; Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_D02G1581.1,GhM_D10G1927.1,GhM_D02G2513.1,GhM_D06G1212.1,GhM_D06G0751.1,GhM_D12G2223.1,GhM_D09G0068.1,GhM_D11G1522.1 | 8 | 0 | Gossypium | Cotton | |||
| - | AT3G05330||AT5G55760 | SRT1; SRT1 (sirtuin 1); DNA binding / NAD or NADH binding / NAD-dependent histone deacetylase/ zinc ion binding||ATN, ATTAN; ATN (TANGLED) | GO:0000914|phragmoplast assembly;GO:0003674|molecular_function;GO:0005677|chromatin silencing complex;GO:0006342|chromatin silencing;GO:0006355|regulation of transcription, DNA-dependent;GO:0007108|cytokinesis, initiation of separation;GO:0003677|DNA binding;GO:0017136|NAD-dependent histone deacetylase activity;GO:0006476|protein amino acid deacetylation;GO:0051287|NAD or NADH binding;GO:0009574|preprophase band;GO:0008270|zinc ion binding;GO:0005875|microtubule associated complex | GhM_D04G0484.1,GhM_Scaf001G008.1,GhM_D04G1363.1,GhM_D10G1037.1,GhM_D05G0515.1,GhM_D09G1790.1,GhM_D05G3136.1,GhM_D06G1868.1 | 8 | 0 | Gossypium | Cotton | |||
| TA1086:GhM_A08G0310.1,GhM_A08G0313.1,GhM_A08G0315.1 | AT4G15560 | CLA1, DEF, CLA, DXS, DXPS2; CLA1 (CLOROPLASTOS ALTERADOS 1); 1-deoxy-D-xylulose-5-phosphate synthase | GO:0015995|chlorophyll biosynthetic process;GO:0008661|1-deoxy-D-xylulose-5-phosphate synthase activity;GO:0009507|chloroplast;GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway | GhM_D08G0299.1,GhM_D12G0875.1,GhM_A12G1196.1,GhM_D10G1929.1,GhM_A10G1199.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1159:GhM_A10G1065.1,GhM_A10G1066.1 | AT5G60200||AT3G50410||AT5G65590 | Dof-type zinc finger domain-containing protein||OBP1; OBP1 (OBF BINDING PROTEIN 1); DNA binding / protein binding / transcription factor | GO:0048364|root development;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0042545|cell wall modification;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009733|response to auxin stimulus;GO:0045941|positive regulation of transcription;GO:0045787|positive regulation of cell cycle;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus | GhM_D10G1023.1,GhM_A12G0804.1,GhM_D12G0785.1,GhM_D10G1021.1,GhM_A12G0788.1,GhM_D12G0772.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1185:GhM_A10G1949.1,GhM_A10G1950.1 | AT5G23570 | SGS3, ATSGS3; SGS3 (SUPPRESSOR OF GENE SILENCING 3) | GO:0009616|virus induced gene silencing;GO:0051607|defense response to virus;GO:0010050|vegetative phase change;GO:0010267|production of ta-siRNAs involved in RNA interference | GhM_A05G0103.1,GhM_D10G1196.1,GhM_D05G0107.1,GhM_A12G0684.1,GhM_D01G0754.1,GhM_D10G2884.1 | 8 | 1 | Gossypium | Cotton | |||
| TA120:GhM_D10G2727.1,GhM_D10G2738.1,GhM_D10G2743.1,GhM_D10G2744.1,GhM_D10G2751.1,GhM_D10G2763.1,GhM_D10G2764.1 | AT1G15910||AT1G13790 | XH/XS domain-containing protein / XS zinc finger domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G2795.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1539:GhM_A13G2728.1,GhM_A13G2730.1 | AT5G19820 | emb2734; emb2734 (embryo defective 2734); binding / lyase | GO:0005488|binding;GO:0009793|embryonic development ending in seed dormancy;GO:0016829|lyase activity;GO:0030089|phycobilisome;GO:0005618|cell wall | GhM_A06G1280.1,GhM_D13G2624.1,GhM_D06G1357.1,GhM_A11G2898.1,GhM_A13G2729.1,GhM_D11G2854.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1656:GhM_D02G0498.1,GhM_D02G0499.1 | - | - | - | GhM_A01G2039.1,GhM_A02G0507.1,GhM_A02G0544.1,GhM_A07G2601.1,GhM_D02G0530.1,GhM_D07G2506.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1748:GhM_D03G0884.1,GhM_D03G0885.1 | - | - | - | GhM_A01G1691.1,GhM_A02G1426.1,GhM_A05G3802.1,GhM_A06G1354.1,GhM_A13G1275.1,GhM_D01G1651.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1875:GhM_D05G0293.1,GhM_D05G0295.1 | AT4G26300 | emb1027; emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA ligase/ arginine-tRNA ligase/ nucleotide binding | GO:0009507|chloroplast;GO:0000166|nucleotide binding;GO:0009793|embryonic development ending in seed dormancy;GO:0005524|ATP binding;GO:0005739|mitochondrion;GO:0006420|arginyl-tRNA aminoacylation;GO:0004814|arginine-tRNA ligase activity;GO:0004812|aminoacyl-tRNA ligase activity | GhM_A05G0284.1,GhM_A08G3127.1,GhM_D08G3053.1,GhM_D05G2040.1,GhM_D09G0916.1,GhM_D08G1800.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1885:GhM_D05G0607.1,GhM_D05G0609.1 | AT5G57940||AT1G19780 | ATCNGC5, CNGC5; ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel||ATCNGC8, CNGC8; ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8); calmodulin binding / cyclic nucleotide binding / ion channel | GO:0030551|cyclic nucleotide binding;GO:0005267|potassium channel activity;GO:0006811|ion transport;GO:0005516|calmodulin binding;GO:0016020|membrane | GhM_A05G0584.1,GhM_A05G0609.1,GhM_A05G1313.1,GhM_A13G2439.1,GhM_D13G2336.1,GhM_D05G1329.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1941:GhM_D05G2650.1,GhM_D05G2657.1 | AT4G32640||AT3G44340 | CEF; CEF (clone eighty-four); protein binding / transporter/ zinc ion binding||protein binding / zinc ion binding | GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0016192|vesicle-mediated transport;GO:0006886|intracellular protein transport;GO:0005215|transporter activity;GO:0030127|COPII vesicle coat;GO:0008270|zinc ion binding;GO:0006888|ER to Golgi vesicle-mediated transport | GhM_A05G2635.1,GhM_A06G0525.1,GhM_A13G2292.1,GhM_D02G0801.1,GhM_D06G0537.1,GhM_D13G2176.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1949:GhM_D05G2906.1,GhM_D05G2907.1 | AT2G21610 | PE11, ATPE11; pectinesterase family protein | GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0006499|N-terminal protein myristoylation;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A03G2547.1,GhM_A05G2154.1,GhM_A07G1415.1,GhM_D02G2573.1,GhM_D05G2177.1,GhM_D07G1393.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1989:GhM_D05G4098.1,GhM_D05G4099.1 | AT4G18975 | pentatricopeptide (PPR) repeat-containing protein | GO:0012505|endomembrane system | GhM_D01G1186.1,GhM_D01G1295.1,GhM_D12G2969.1,GhM_A05G4575.1,GhM_D05G3899.1,GhM_D12G1224.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2099:GhM_A01G0223.1,GhM_A01G0224.1 | AT1G06290 | ACX3, ATACX3; ACX3 (ACYL-COA OXIDASE 3); acyl-CoA oxidase | GO:0006635|fatty acid beta-oxidation;GO:0005777|peroxisome;GO:0051791|medium-chain fatty acid metabolic process;GO:0003997|acyl-CoA oxidase activity | GhM_D01G0200.1,GhM_A12G1832.1,GhM_D12G1766.1,GhM_A03G2069.1,GhM_D02G2094.1,GhM_D05G3206.1 | 8 | 1 | Gossypium | Cotton | |||
| TA239:GhM_D05G4332.1,GhM_D05G4338.1,GhM_D05G4341.1,GhM_D05G4345.1,GhM_D05G4348.1 | AT5G55600 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | GO:0003723|RNA binding;GO:0003677|DNA binding;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A04G0067.1,GhM_A01G0962.1,GhM_D01G0920.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2492:GhM_D10G1913.1,GhM_D10G1915.1 | AT5G18860||AT5G18890 | inosine-uridine preferring nucleoside hydrolase family protein | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0005618|cell wall | GhM_A02G0510.1,GhM_A09G2838.1,GhM_A10G1210.1,GhM_A10G1211.1,GhM_D02G0502.1,GhM_D09G2712.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2555:GhM_D11G0613.1,GhM_D11G0625.1 | AT2G22475 | GEM; GEM (GL2-EXPRESSION MODULATOR) | GO:0003674|molecular_function;GO:0010482|regulation of epidermal cell division;GO:0005575|cellular_component;GO:0048765|root hair cell differentiation;GO:0010026|trichome differentiation | GhM_A02G1719.1,GhM_A11G0616.1,GhM_A11G2425.1,GhM_A12G1177.1,GhM_D03G0442.1,GhM_D12G0947.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2605:GhM_D11G2176.1,GhM_D11G2179.1 | AT2G23520||AT4G37100 | catalytic/ pyridoxal phosphate binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0030170|pyridoxal phosphate binding;GO:0003824|catalytic activity | GhM_A06G0154.1,GhM_D06G0157.1,GhM_D10G1017.1,GhM_A02G2054.1,GhM_A11G2204.1,GhM_D03G0207.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2676:GhM_D11G3944.1,GhM_D11G3948.1 | AT3G53020||AT2G36620 | STV1, RPL24B, RPL24; STV1 (SHORT VALVE1); structural constituent of ribosome||RPL24A; RPL24A (ribosomal protein L24); structural constituent of ribosome | GO:0048467|gynoecium development;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0009734|auxin mediated signaling pathway;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_A01G2616.1,GhM_A09G1796.1,GhM_A09G2192.1,GhM_A11G4051.1,GhM_D01G2544.1,GhM_D09G1687.1 | 8 | 1 | Gossypium | Cotton | |||
| TA2861:GhM_D13G2779.1,GhM_D13G2780.1 | AT1G07170 | LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PHF5-like (InterPro:IPR005345); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30000.1); Has 292 Blast hits to 292 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 75; Plants - 47; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). | GO:0005575|cellular_component | GhM_A05G1133.1,GhM_A08G0087.1,GhM_A09G1194.1,GhM_A13G2878.1,GhM_D05G1147.1,GhM_D09G1126.1 | 8 | 1 | Gossypium | Cotton | |||
| TA3050:GhM_A04G0213.1,GhM_A04G0217.1 | AT1G50600||AT2G04890||AT5G48150 | SCL5; SCL5; transcription factor||SCL21; SCL21 (SCARECROW-LIKE 21); transcription factor||PAT1; PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor | GO:0009640|photomorphogenesis;GO:0045449|regulation of transcription;GO:0004871|signal transducer activity;GO:0005737|cytoplasm;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A01G0775.1,GhM_D01G0736.1,GhM_D13G1810.1,GhM_A13G1914.1,GhM_D05G4164.1,GhM_D05G4165.1 | 8 | 1 | Gossypium | Cotton | |||
| TA3186:GhM_A05G2793.1,GhM_A05G2797.1 | AT1G34260 | phosphatidylinositol-4-phosphate 5-kinase family protein | GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0005575|cellular_component;GO:0046488|phosphatidylinositol metabolic process;GO:0016307|phosphatidylinositol phosphate kinase activity | GhM_D05G2792.1,GhM_A09G1511.1,GhM_D09G1412.1,GhM_D09G1413.1,GhM_D09G1414.1,GhM_D09G1415.1 | 8 | 1 | Gossypium | Cotton | |||
| TA3397:GhM_A07G2379.1,GhM_A07G2381.1 | - | - | - | GhM_A07G1712.1,GhM_A07G1139.1,GhM_D07G1616.1,GhM_A08G1806.1,GhM_A02G1091.1,GhM_A10G1261.1 | 8 | 1 | Gossypium | Cotton | |||
| TA3578:GhM_A09G2480.1,GhM_A09G2481.1 | AT5G53560||AT5G48810||AT2G32720 | ATB5-A, B5 #2, ATCB5-E, CB5-E; CB5-E (CYTOCHROME B5 ISOFORM E); heme binding||B5 #4, ATCB5-B, CB5-B; CB5-B (CYTOCHROME B5 ISOFORM B); heme binding||ATB5-B, B5 #3, ATCB5-D, CB5-D; CB5-D (CYTOCHROME B5 ISOFORM D); heme binding | GO:0005789|endoplasmic reticulum membrane;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0042742|defense response to bacterium;GO:0009535|chloroplast thylakoid membrane;GO:0005773|vacuole | GhM_A07G2595.1,GhM_A08G2523.1,GhM_D11G1609.1,GhM_A11G1622.1,GhM_D08G2460.1,GhM_D07G2498.1 | 8 | 1 | Gossypium | Cotton | |||
| TA382:GhM_D04G2173.1,GhM_D04G2174.1,GhM_D04G2176.1,GhM_D04G2183.1 | AT4G31940 | CYP82C4; CYP82C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A04G1498.1,GhM_A04G1695.1,GhM_A12G0324.1,GhM_D12G0473.1 | 8 | 1 | Gossypium | Cotton | |||
| TA394:GhM_D05G4411.1,GhM_D05G4412.1,GhM_D05G4413.1,GhM_D05G4414.1 | AT5G56290 | PEX5, ATPEX5; PEX5 (PEROXIN 5); peroxisome matrix targeting signal-1 binding / protein binding | GO:0006625|protein targeting to peroxisome;GO:0005052|peroxisome matrix targeting signal-1 binding;GO:0005515|protein binding;GO:0009733|response to auxin stimulus | GhM_A01G0020.1,GhM_A03G1275.1,GhM_A04G0008.1,GhM_A05G3459.1 | 8 | 1 | Gossypium | Cotton | |||
| TA442:GhM_D10G2731.1,GhM_D10G2737.1,GhM_D10G2739.1,GhM_D10G2752.1 | AT2G04032||AT1G31260 | ZIP7; ZIP7 (ZINC TRANSPORTER 7 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter/ zinc ion transmembrane transporter||ZIP10; ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter | GO:0012505|endomembrane system;GO:0005385|zinc ion transmembrane transporter activity;GO:0046873|metal ion transmembrane transporter activity;GO:0006812|cation transport;GO:0006829|zinc ion transport;GO:0030001|metal ion transport;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0008324|cation transmembrane transporter activity | GhM_A03G1440.1,GhM_A13G0063.1,GhM_D02G1561.1,GhM_D13G0068.1 | 8 | 1 | Gossypium | Cotton | |||
| TA595:GhM_A11G3987.1,GhM_A11G3988.1,GhM_A11G4007.1 | AT3G11660||AT3G52470 | NHL1; NHL1||harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | GO:0012505|endomembrane system;GO:0051607|defense response to virus;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2515.1,GhM_D11G3884.1,GhM_D01G2449.1,GhM_A04G0733.1,GhM_D04G1122.1 | 8 | 1 | Gossypium | Cotton | |||
| TA73:GhM_A13G2589.1,GhM_A13G2590.1,GhM_A13G2592.1,GhM_A13G2595.1,GhM_A13G2597.1,GhM_A13G2598.1,GhM_A13G2599.1,GhM_A13G2600.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | - | 8 | 1 | Gossypium | Cotton | |||
| TA74:GhM_D01G0261.1,GhM_D01G0262.1,GhM_D01G0263.1,GhM_D01G0264.1,GhM_D01G0265.1,GhM_D01G0266.1,GhM_D01G0267.1,GhM_D01G0268.1 | AT5G07900||AT1G21150||AT1G62120 | mitochondrial transcription termination factor family protein / mTERF family protein||mitochondrial transcription termination factor-related / mTERF-related | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0016020|membrane;GO:0005575|cellular_component | - | 8 | 1 | Gossypium | Cotton | |||
| TA804:GhM_D07G1004.1,GhM_D07G1006.1,GhM_D07G1007.1 | AT2G05760||AT2G34190 | xanthine/uracil permease family protein | GO:0022857|transmembrane transporter activity;GO:0016020|membrane;GO:0006810|transport | GhM_A05G1737.1,GhM_A07G1019.1,GhM_A11G1798.1,GhM_D05G1745.1,GhM_D11G1785.1 | 8 | 1 | Gossypium | Cotton | |||
| TA844:GhM_D09G2259.1,GhM_D09G2260.1,GhM_D09G2261.1 | AT5G62350||AT4G12390||AT1G62760||AT3G47380 | invertase/pectin methylesterase inhibitor family protein||invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)||PME1; PME1 (PECTIN METHYLESTERASE INHIBITOR 1); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0030599|pectinesterase activity | GhM_A03G0190.1,GhM_A08G2259.1,GhM_A09G2372.1,GhM_D03G1909.1,GhM_A09G2373.1 | 8 | 1 | Gossypium | Cotton | |||
| TA916:GhM_D12G1520.1,GhM_D12G1522.1,GhM_D12G1523.1 | AT1G02520||AT2G47000 | MDR4, PGP4, ABCB4, ATPGP4; ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase||PGP11; PGP11 (P-GLYCOPROTEIN 11); ATPase, coupled to transmembrane movement of substances | GO:0009630|gravitropism;GO:0006810|transport;GO:0009735|response to cytokinin stimulus;GO:0009733|response to auxin stimulus;GO:0009926|auxin polar transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0010540|basipetal auxin transport;GO:0048767|root hair elongation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008559|xenobiotic-transporting ATPase activity;GO:0010315|auxin efflux | GhM_A08G1656.1,GhM_A11G1221.1,GhM_A12G1570.1,GhM_D08G1612.1,GhM_D11G1225.1 | 8 | 1 | Gossypium | Cotton | |||
| TA944:GhM_D13G2420.1,GhM_D13G2421.1,GhM_D13G2422.1 | AT1G19110 | inter-alpha-trypsin inhibitor heavy chain-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A06G0929.1,GhM_A07G0182.1,GhM_A13G2511.1,GhM_D06G0935.1,GhM_D13G2795.1 | 8 | 1 | Gossypium | Cotton | |||
| TA1016:GhM_A05G0231.1,GhM_A05G0232.1,GhM_A05G0233.1;TA1874:GhM_D05G0237.1,GhM_D05G0239.1 | AT3G24420 | hydrolase, alpha/beta fold family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016787|hydrolase activity | GhM_A06G0717.1,GhM_D05G0238.1,GhM_D06G0720.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1062:GhM_A06G2006.1,GhM_A06G2007.1,GhM_A06G2008.1;TA2058:GhM_D06G1990.1,GhM_D06G1992.1 | AT5G35810||AT4G03440||AT3G18670 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G54070.1); Has 446 Blast hits to 440 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||ankyrin repeat family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D03G1656.1,GhM_D10G0104.1,GhM_A10G0119.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1116:GhM_A09G2287.1,GhM_A09G2290.1,GhM_A09G2291.1;TA2426:GhM_D09G2191.1,GhM_D09G2193.1 | AT1G64660 | ATMGL; ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE); catalytic/ methionine gamma-lyase | GO:0019458|methionine catabolic process via 2-oxobutanoate;GO:0006520|cellular amino acid metabolic process;GO:0003824|catalytic activity;GO:0018826|methionine gamma-lyase activity;GO:0005829|cytosol | GhM_A09G2288.1,GhM_A12G2964.1,GhM_D12G2851.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1151:GhM_A10G0730.1,GhM_A10G0735.1;TA2461:GhM_D10G0710.1,GhM_D10G0712.1 | AT1G59870 | PEN3, PDR8, ATPDR8; PEN3 (PENETRATION 3); ATPase, coupled to transmembrane movement of substances / cadmium ion transmembrane transporter | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009627|systemic acquired resistance;GO:0005739|mitochondrion;GO:0015086|cadmium ion transmembrane transporter activity;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0052544|callose deposition in cell wall during defense response;GO:0031348|negative regulation of defense response;GO:0015691|cadmium ion transport;GO:0006855|drug transmembrane transport;GO:0009817|defense response to fungus, incompatible interaction;GO:0042344|indole glucosinolate catabolic process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0042742|defense response to bacterium | GhM_A05G1464.1,GhM_D05G1478.1,GhM_A02G1540.1,GhM_D03G0652.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1305:GhM_A11G3202.1,GhM_A11G3208.1;TA2630:GhM_D11G3121.1,GhM_D11G3126.1 | AT5G28150||AT3G04860 | unknown protein | GO:0008150|biological_process | GhM_A08G0835.1,GhM_D11G3697.1,GhM_A11G3779.1,GhM_D08G0793.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1309:GhM_A11G3250.1,GhM_A11G3253.1;TA2634:GhM_D11G3171.1,GhM_D11G3173.1 | AT3G13460||AT1G55500 | ECT4; ECT4||ECT2; ECT2; protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0005575|cellular_component | GhM_A08G2738.1,GhM_A13G1457.1,GhM_D08G2680.1,GhM_D13G1349.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1390:GhM_A12G1347.1,GhM_A12G1348.1;TA2709:GhM_D12G1285.1,GhM_D12G1286.1 | AT3G60750||AT2G45290 | transketolase, putative | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0009570|chloroplast stroma;GO:0009651|response to salt stress;GO:0004802|transketolase activity | GhM_A11G0927.1,GhM_D11G0942.1,GhM_A07G1800.1,GhM_D07G1762.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1426:GhM_A12G2505.1,GhM_A12G2506.1;TA3359:GhM_A07G0535.1,GhM_A07G0537.1 | AT5G61520||AT3G19930 | hexose transporter, putative||STP4, ATSTP4; STP4 (SUGAR TRANSPORTER 4); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005887|integral to plasma membrane;GO:0055085|transmembrane transport;GO:0015770|sucrose transport;GO:0008506|sucrose:hydrogen symporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0016021|integral to membrane;GO:0015145|monosaccharide transmembrane transporter activity | GhM_A03G0806.1,GhM_D07G0527.1,GhM_D12G2389.1,GhM_D03G1293.1 | 8 | 2 | Gossypium | Cotton | |||
| TA151:GhM_D06G2143.1,GhM_D06G2144.1,GhM_D06G2145.1,GhM_D06G2146.1,GhM_D06G2147.1,GhM_D06G2148.1;TA3318:GhM_A06G2165.1,GhM_A06G2166.1 | AT4G00230||AT5G59190||AT5G59120 | subtilase family protein||XSP1; XSP1 (xylem serine peptidase 1); identical protein binding / serine-type endopeptidase||ATSBT4.13; ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13); identical protein binding / serine-type endopeptidase | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0046686|response to cadmium ion;GO:0042802|identical protein binding;GO:0043086|negative regulation of catalytic activity;GO:0005618|cell wall;GO:0006508|proteolysis;GO:0005575|cellular_component | - | 8 | 2 | Gossypium | Cotton | |||
| TA1556:GhM_D01G0283.1,GhM_D01G0285.1;TA2103:GhM_A01G0306.1,GhM_A01G0307.1 | AT3G16857||AT4G16110 | ARR2; ARR2 (ARABIDOPSIS RESPONSE REGULATOR 2); transcription factor/ two-component response regulator||ARR1; ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1); transcription factor/ two-component response regulator | GO:0048367|shoot development;GO:0009873|ethylene mediated signaling pathway;GO:0010150|leaf senescence;GO:0009735|response to cytokinin stimulus;GO:0031537|regulation of anthocyanin metabolic process;GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway;GO:0003700|transcription factor activity;GO:0010119|regulation of stomatal movement;GO:0010380|regulation of chlorophyll biosynthetic process;GO:0009723|response to ethylene stimulus;GO:0000156|two-component response regulator activity | GhM_A09G2871.1,GhM_D10G2059.1,GhM_A10G2125.1,GhM_D09G2744.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1559:GhM_D01G0350.1,GhM_D01G0351.1;TA2106:GhM_A01G0358.1,GhM_A01G0360.1 | AT1G79090 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A13G2057.1,GhM_A08G3006.1,GhM_D08G2938.1,GhM_D13G1947.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1625:GhM_D01G2673.1,GhM_D01G2674.1;TA2194:GhM_A01G2746.1,GhM_A01G2747.1 | AT1G07510||AT2G29080 | ftsh3; ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase||ftsh10; ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding | GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0009536|plastid;GO:0005524|ATP binding;GO:0005739|mitochondrion;GO:0030163|protein catabolic process;GO:0006508|proteolysis;GO:0017111|nucleoside-triphosphatase activity;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A05G1036.1,GhM_D05G1047.1,GhM_D09G1825.1,GhM_A09G1926.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1647:GhM_D02G0289.1,GhM_D02G0302.1;TA2881:GhM_A02G0259.1,GhM_A02G0280.1 | AT4G13600||AT1G79480 | LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family protein 17 (TAIR:AT5G67460.1); Has 136128 Blast hits to 57102 proteins in 1817 species: Archae - 165; Bacteria - 17617; Metazoa - 56967; Fungi - 20796; Plants - 12784; Viruses - 3661; Other Eukaryotes - 24138 (source: NCBI BLink).||EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding (TAIR:AT5G08000.1); Has 804 Blast hits to 768 proteins in 66 species: Archae - 0; Bacteria - 9; Metazoa - 8; Fungi - 36; Plants - 728; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | ;GO:0012505|endomembrane system | GhM_D10G1581.1,GhM_A10G1506.1,GhM_D10G1614.1,GhM_A03G1238.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1708:GhM_D02G2546.1,GhM_D02G2547.1;TA3030:GhM_A03G2523.1,GhM_A03G2524.1 | AT1G10960||AT1G60950 | ATFD1; ATFD1 (FERREDOXIN 1); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding||FED A, ATFD2; FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | GO:0009767|photosynthetic electron transport chain;GO:0009507|chloroplast;GO:0051536|iron-sulfur cluster binding;GO:0009570|chloroplast stroma;GO:0009416|response to light stimulus;GO:0051537|2 iron, 2 sulfur cluster binding;GO:0009055|electron carrier activity | GhM_D12G0300.1,GhM_A12G0298.1,GhM_D13G0383.1,GhM_A13G0401.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1755:GhM_D03G1122.1,GhM_D03G1127.1;TA2988:GhM_A03G0886.1,GhM_A03G0889.1 | AT5G03260 | LAC11; LAC11 (laccase 11); laccase | GO:0012505|endomembrane system;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0046274|lignin catabolic process | GhM_A13G0287.1,GhM_D13G0274.1,GhM_A10G1096.1,GhM_D11G2105.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1756:GhM_D03G1124.1,GhM_D03G1126.1;TA2989:GhM_A03G0887.1,GhM_A03G0888.1 | AT1G18800 | NRP2; NRP2 (NAP1-RELATED PROTEIN 2); DNA binding / chromatin binding / histone binding | GO:0030154|cell differentiation;GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0003682|chromatin binding;GO:0003677|DNA binding;GO:0008283|cell proliferation;GO:0010311|lateral root formation;GO:0042393|histone binding | GhM_A11G0396.1,GhM_A07G0773.1,GhM_D11G0377.1,GhM_D07G0764.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1781:GhM_D03G1821.1,GhM_D03G1824.1;TA2965:GhM_A03G0300.1,GhM_A03G0303.1 | AT4G11410||AT4G23430 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0009706|chloroplast inner membrane;GO:0016491|oxidoreductase activity | GhM_A09G0526.1,GhM_D08G1282.1,GhM_D08G2334.1,GhM_D09G0549.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1808:GhM_D04G0554.1,GhM_D04G0561.1;TA3232:GhM_A05G4382.1,GhM_A05G4387.1 | AT3G01170 | structural constituent of ribosome | GO:0009507|chloroplast;GO:0005840|ribosome;GO:0005622|intracellular;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A11G0805.1,GhM_D09G0172.1,GhM_A09G0176.1,GhM_D11G0825.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1877:GhM_D05G0382.1,GhM_D05G0384.1;TA3121:GhM_A05G0363.1,GhM_A05G0365.1 | AT1G72610||AT5G20630 | GLP3, GLP3A, GLP3B, ATGER3, GER3; GER3 (GERMIN 3); oxalate oxidase||GLP1, ATGER1, GER1; GER1 (GERMIN-LIKE PROTEIN 1); oxalate oxidase | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0005634|nucleus;GO:0031012|extracellular matrix;GO:0048046|apoplast;GO:0005618|cell wall;GO:0018119|peptidyl-cysteine S-nitrosylation;GO:0009409|response to cold | GhM_A07G0175.1,GhM_D07G0175.1,GhM_A09G1080.1,GhM_D09G1019.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1880:GhM_D05G0452.1,GhM_D05G0453.1;TA3126:GhM_A05G0431.1,GhM_A05G0433.1 | AT5G12020 | HSP17.6II; HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) | GO:0009408|response to heat;GO:0005575|cellular_component | GhM_D06G1034.1,GhM_A06G1034.1,GhM_A07G0240.1,GhM_D07G0241.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1968:GhM_D05G3472.1,GhM_D05G3473.1;TA3208:GhM_A05G3524.1,GhM_A05G3527.1 | AT1G14040 | LOCATED IN: integral to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03240.1); Has 732 Blast hits to 696 proteins in 144 species: Archae - 0; Bacteria - 0; Metazoa - 238; Fungi - 246; Plants - 151; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | GO:0016021|integral to membrane | GhM_A03G1373.1,GhM_A12G2110.1,GhM_D12G2012.1,GhM_D02G1497.1 | 8 | 2 | Gossypium | Cotton | |||
| TA196:GhM_A10G1551.1,GhM_A10G1552.1,GhM_A10G1553.1,GhM_A10G1554.1,GhM_A10G1555.1;TA2481:GhM_D10G1559.1,GhM_D10G1561.1 | AT4G14480 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_D10G1547.1 | 8 | 2 | Gossypium | Cotton | |||
| TA197:GhM_A10G1763.1,GhM_A10G1764.1,GhM_A10G1765.1,GhM_A10G1766.1,GhM_A10G1767.1;TA860:GhM_D10G1367.1,GhM_D10G1369.1,GhM_D10G1370.1 | AT1G74170||AT1G58190||AT5G49290 | AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding||protein binding||AtRLP13; AtRLP13 (Receptor Like Protein 13); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction | - | 8 | 2 | Gossypium | Cotton | |||
| TA2041:GhM_D06G1316.1,GhM_D06G1318.1;TA3296:GhM_A06G1504.1,GhM_A06G1505.1 | AT4G31480 | coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0030117|membrane coat;GO:0030126|COPI vesicle coat;GO:0030276|clathrin binding;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005198|structural molecule activity | GhM_A05G0695.1,GhM_D05G0716.1,GhM_A13G2398.1,GhM_D13G2296.1 | 8 | 2 | Gossypium | Cotton | |||
| TA2066:GhM_D06G2130.1,GhM_D06G2131.1;TA3317:GhM_A06G2140.1,GhM_A06G2141.1 | AT2G40116||AT3G08510 | phosphoinositide-specific phospholipase C family protein||ATPLC2; ATPLC2 (PHOSPHOLIPASE C 2); phospholipase C | GO:0004629|phospholipase C activity;GO:0006629|lipid metabolic process;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A05G3898.1,GhM_A10G2965.1,GhM_D10G2914.1,GhM_D04G0809.1 | 8 | 2 | Gossypium | Cotton | |||
| TA208:GhM_A11G3596.1,GhM_A11G3597.1,GhM_A11G3598.1,GhM_A11G3599.1,GhM_A11G3601.1;TA2650:GhM_D11G3507.1,GhM_D11G3509.1 | AT4G10780||AT1G61180||AT1G12220||AT1G61300||AT4G27220 | RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding||disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0005622|intracellular;GO:0009816|defense response to bacterium, incompatible interaction;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_D11G3510.1 | 8 | 2 | Gossypium | Cotton | |||
| TA2155:GhM_A01G1599.1,GhM_A01G1600.1;TA2858:GhM_D13G2662.1,GhM_D13G2663.1 | AT3G12120 | FAD2; FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | GO:0016720|delta12-fatty acid dehydrogenase activity;GO:0045485|omega-6 fatty acid desaturase activity;GO:0006629|lipid metabolic process;GO:0005783|endoplasmic reticulum | GhM_D01G1565.1,GhM_A11G3950.1,GhM_D11G3859.1,GhM_A13G2774.1 | 8 | 2 | Gossypium | Cotton | |||
| TA221:GhM_D01G0584.1,GhM_D01G0586.1,GhM_D01G0587.1,GhM_D01G0588.1,GhM_D01G0590.1;TA782:GhM_A01G0620.1,GhM_A01G0621.1,GhM_A01G0622.1 | AT5G54010||AT1G64920||AT4G27560||AT5G54060 | glycosyltransferase family protein||UF3GT; UF3GT (udp-glucose:flavonoid 3-O-glucosyltransferase); transferase, transferring glycosyl groups | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0006499|N-terminal protein myristoylation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 8 | 2 | Gossypium | Cotton | |||
| TA224:GhM_D02G0366.1,GhM_D02G0367.1,GhM_D02G0368.1,GhM_D02G0373.1,GhM_D02G0374.1;TA953:GhM_A02G0345.1,GhM_A02G0346.1,GhM_A02G0350.1 | AT4G03550 | ATGSL05, GSL05, ATGSL5, PMR4, GSL5; ATGSL05 (GLUCAN SYNTHASE-LIKE 5); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | GO:0042742|defense response to bacterium;GO:0009863|salicylic acid mediated signaling pathway;GO:0009965|leaf morphogenesis;GO:0009620|response to fungus;GO:0009555|pollen development;GO:0010150|leaf senescence;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0052544|callose deposition in cell wall during defense response;GO:0006952|defense response;GO:0006075|1,3-beta-glucan biosynthetic process;GO:0003843|1,3-beta-glucan synthase activity;GO:0052542|callose deposition during defense response;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0000003|reproduction;GO:0000148|1,3-beta-glucan synthase complex | - | 8 | 2 | Gossypium | Cotton | |||
| TA2300:GhM_D08G0514.1,GhM_D08G0515.1;TA3435:GhM_A08G0548.1,GhM_A08G0549.1 | AT4G02500 | ATXT2, XXT2, XT2; XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase | GO:0016021|integral to membrane;GO:0005739|mitochondrion | GhM_A02G0556.1,GhM_A11G1351.1,GhM_D02G0542.1,GhM_D11G1350.1 | 8 | 2 | Gossypium | Cotton | |||
| TA2321:GhM_D08G1599.1,GhM_D08G1600.1;TA3461:GhM_A08G1643.1,GhM_A08G1644.1 | AT1G09330||AT2G47190||AT3G06490 | unknown protein||MYB108, AtMYB108, BOS1; MYB108 (myb domain protein 108); DNA binding / transcription factor||ATMYB2, MYB2; MYB2 (MYB DOMAIN PROTEIN 2); DNA binding / calmodulin binding / transcription activator/ transcription factor | GO:0008150|biological_process;GO:0016563|transcription activator activity;GO:0009620|response to fungus;GO:0003674|molecular_function;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0005516|calmodulin binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009414|response to water deprivation;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0016021|integral to membrane | GhM_A02G0636.1,GhM_A11G3443.1,GhM_D11G3355.1,GhM_D02G0631.1 | 8 | 2 | Gossypium | Cotton | |||
| TA2334:GhM_D08G2221.1,GhM_D08G2226.1;TA3476:GhM_A08G2268.1,GhM_A08G2272.1 | AT1G12330 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_D08G2222.1,GhM_A12G2768.1,GhM_D12G2655.1,GhM_D13G0641.1 | 8 | 2 | Gossypium | Cotton | |||
| TA235:GhM_D05G3200.1,GhM_D05G3201.1,GhM_D05G3202.1,GhM_D05G3203.1,GhM_D05G3204.1;TA1037:GhM_A05G3208.1,GhM_A05G3209.1,GhM_A05G3210.1 | AT5G07010||AT5G43690||AT5G07000 | ATST2B, ST2B; ST2B (SULFOTRANSFERASE 2B); hydroxyjasmonate sulfotransferase/ sulfotransferase||ATST2A, ST2A; ST2A (SULFOTRANSFERASE 2A); hydroxyjasmonate sulfotransferase/ sulfotransferase||sulfotransferase family protein | GO:0008150|biological_process;GO:0009694|jasmonic acid metabolic process;GO:0008146|sulfotransferase activity;GO:0009753|response to jasmonic acid stimulus;GO:0005575|cellular_component | - | 8 | 2 | Gossypium | Cotton | |||
| TA2484:GhM_D10G1631.1,GhM_D10G1635.1;TA3506:GhM_A09G0008.1,GhM_A09G0015.1 | AT5G13930 | CHS, TT4, ATCHS; TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | GO:0010224|response to UV-B;GO:0006979|response to oxidative stress;GO:0016210|naringenin-chalcone synthase activity;GO:0031540|regulation of anthocyanin biosynthetic process;GO:0005634|nucleus;GO:0009926|auxin polar transport;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus;GO:0009813|flavonoid biosynthetic process;GO:0009629|response to gravity;GO:0009705|plant-type vacuole membrane;GO:0005783|endoplasmic reticulum;GO:0009715|chalcone biosynthetic process | GhM_A02G0287.1,GhM_A05G3699.1,GhM_D09G0004.1,GhM_D05G3650.1 | 8 | 2 | Gossypium | Cotton | |||
| TA251:GhM_D08G0102.1,GhM_D08G0103.1,GhM_D08G0104.1,GhM_D08G0105.1,GhM_D08G0106.1;TA1084:GhM_A08G0118.1,GhM_A08G0119.1,GhM_A08G0120.1 | AT3G11550||AT2G27370 | integral membrane family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 8 | 2 | Gossypium | Cotton | |||
| TA278:GhM_D12G0609.1,GhM_D12G0610.1,GhM_D12G0611.1,GhM_D12G0612.1,GhM_D12G0613.1;TA1368:GhM_A12G0613.1,GhM_A12G0614.1 | AT1G48750||AT1G73780||AT5G38170 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0008289|lipid binding;GO:0006869|lipid transport | GhM_D02G2421.1 | 8 | 2 | Gossypium | Cotton | |||
| TA284:GhM_D13G2522.1,GhM_D13G2523.1,GhM_D13G2524.1,GhM_D13G2525.1,GhM_D13G2526.1;TA642:GhM_A13G2623.1,GhM_A13G2624.1,GhM_A13G2625.1 | AT5G20230||AT5G53870||AT2G25060||AT3G17675 | plastocyanin-like domain-containing protein||copper ion binding / electron carrier||ATBCB, BCB; ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding / electron carrier | GO:0005507|copper ion binding;GO:0006979|response to oxidative stress;GO:0015690|aluminum ion transport;GO:0046658|anchored to plasma membrane;GO:0009611|response to wounding;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0009646|response to absence of light;GO:0005773|vacuole;GO:0009055|electron carrier activity | - | 8 | 2 | Gossypium | Cotton | |||
| TA293:GhM_A05G3471.1,GhM_A05G3472.1,GhM_A05G3473.1,GhM_A05G3474.1,GhM_A05G3475.1;TA2097:GhM_A01G0209.1,GhM_A01G0210.1 | AT1G15890||AT1G12220||AT1G61190||AT3G15700||AT1G63350||AT5G63020 | RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding||disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein, putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0005622|intracellular;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005575|cellular_component | GhM_D01G0188.1 | 8 | 2 | Gossypium | Cotton | |||
| TA294:GhM_A05G4585.1,GhM_A05G4587.1,GhM_A05G4588.1,GhM_A05G4589.1,GhM_A05G4591.1;TA697:GhM_D04G0359.1,GhM_D04G0363.1,GhM_D04G0366.1 | AT4G33460 | ATNAP13, EMB2751; ATNAP13; transporter | GO:0009793|embryonic development ending in seed dormancy;GO:0009941|chloroplast envelope;GO:0005215|transporter activity | - | 8 | 2 | Gossypium | Cotton | |||
| TA314:GhM_A10G0662.1,GhM_A10G0664.1,GhM_A10G0666.1,GhM_A10G0667.1;TA436:GhM_D10G0631.1,GhM_D10G0632.1,GhM_D10G0634.1,GhM_D10G0635.1 | AT3G22060 | receptor protein kinase-related | GO:0009737|response to abscisic acid stimulus;GO:0003674|molecular_function;GO:0005773|vacuole;GO:0005618|cell wall | - | 8 | 2 | Gossypium | Cotton | |||
| TA351:GhM_D01G0560.1,GhM_D01G0561.1,GhM_D01G0562.1,GhM_D01G0563.1;TA399:GhM_A01G0595.1,GhM_A01G0596.1,GhM_A01G0598.1,GhM_A01G0599.1 | AT2G42300 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 8 | 2 | Gossypium | Cotton | |||
| TA362:GhM_D02G0676.1,GhM_D02G0677.1,GhM_D02G0678.1,GhM_D02G0679.1;TA2265:GhM_D07G2292.1,GhM_D07G2293.1 | AT3G21760||AT3G21780 | UGT71B6; UGT71B6 (UDP-glucosyl transferase 71B6); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0010294|abscisic acid glucosyltransferase activity;GO:0009651|response to salt stress;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0046345|abscisic acid catabolic process;GO:0005575|cellular_component | GhM_A02G0682.1,GhM_A07G2370.1 | 8 | 2 | Gossypium | Cotton | |||
| TA398:GhM_A01G0541.1,GhM_A01G0542.1,GhM_A01G0545.1,GhM_A01G0546.1;TA1569:GhM_D01G0507.1,GhM_D01G0514.1 | AT1G74100||AT5G43690||AT2G03760||AT2G14920||AT4G26280 | ATST4A, ST4A; ST4A (SULFOTRANSFERASE 4A); brassinosteroid sulfotransferase/ sulfotransferase||ST, ATST1, RAR047, ST1; ST; brassinosteroid sulfotransferase/ sulfotransferase||sulfotransferase family protein||SOT16, ATSOT16, CORI-7, ATST5A; SOT16 (SULFOTRANSFERASE 16); desulfoglucosinolate sulfotransferase/ sulfotransferase | GO:0008150|biological_process;GO:0009735|response to cytokinin stimulus;GO:0019761|glucosinolate biosynthetic process;GO:0032260|response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance;GO:0008146|sulfotransferase activity;GO:0047364|desulfoglucosinolate sulfotransferase activity;GO:0006952|defense response;GO:0016131|brassinosteroid metabolic process;GO:0005575|cellular_component | GhM_A11G0097.1,GhM_D11G0102.1 | 8 | 2 | Gossypium | Cotton | |||
| TA401:GhM_A01G1032.1,GhM_A01G1034.1,GhM_A01G1035.1,GhM_A01G1039.1;TA652:GhM_D01G0990.1,GhM_D01G0991.1,GhM_D01G0992.1 | AT2G04240 | XERICO; XERICO; protein binding / zinc ion binding | GO:0005515|protein binding;GO:0009739|response to gibberellin stimulus;GO:0009687|abscisic acid metabolic process;GO:0010200|response to chitin;GO:0006970|response to osmotic stress;GO:0009651|response to salt stress;GO:0008270|zinc ion binding | GhM_D01G0999.1 | 8 | 2 | Gossypium | Cotton | |||
| TA410:GhM_D07G2688.1,GhM_D07G2689.1,GhM_D07G2690.1,GhM_D07G2694.1;TA516:GhM_A07G2782.1,GhM_A07G2783.1,GhM_A07G2784.1,GhM_A07G2789.1 | AT3G28600||AT3G28580||AT5G40010 | AAA-type ATPase family protein||AATP1; AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0012505|endomembrane system;GO:0016887|ATPase activity;GO:0009737|response to abscisic acid stimulus;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding;GO:0005783|endoplasmic reticulum | - | 8 | 2 | Gossypium | Cotton | |||
| TA448:GhM_D11G2873.1,GhM_D11G2875.1,GhM_D11G2876.1,GhM_D11G2877.1;TA1293:GhM_A11G2933.1,GhM_A11G2934.1 | AT4G27190||AT1G61190 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A11G2941.1,GhM_A11G2942.1 | 8 | 2 | Gossypium | Cotton | |||
| TA471:GhM_A02G1847.1,GhM_A02G1849.1,GhM_A02G1850.1,GhM_A02G1851.1;TA1736:GhM_D03G0411.1,GhM_D03G0413.1 | AT1G22360||AT1G22400||AT1G22370 | AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A2; AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||UGT85A1, ATUGT85A1; UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A02G1692.1,GhM_A02G1975.1 | 8 | 2 | Gossypium | Cotton | |||
| TA513:GhM_A07G2624.1,GhM_A07G2625.1,GhM_A07G2626.1,GhM_A07G2627.1;TA812:GhM_D07G2523.1,GhM_D07G2524.1,GhM_D07G2526.1 | - | - | - | GhM_A03G1122.1 | 8 | 2 | Gossypium | Cotton | |||
| TA514:GhM_A07G2708.1,GhM_A07G2709.1,GhM_A07G2710.1,GhM_A07G2711.1;TA813:GhM_D07G2606.1,GhM_D07G2608.1,GhM_D07G2609.1 | - | - | - | GhM_D07G2607.1 | 8 | 2 | Gossypium | Cotton | |||
| TA527:GhM_A09G0540.1,GhM_A09G0541.1,GhM_A09G0542.1,GhM_A09G0543.1;TA991:GhM_A04G0452.1,GhM_A04G0454.1,GhM_A04G0455.1 | - | - | - | GhM_A05G3714.1 | 8 | 2 | Gossypium | Cotton | |||
| TA559:GhM_A10G2575.1,GhM_A10G2576.1,GhM_A10G2579.1;TA2512:GhM_D10G2489.1,GhM_D10G2490.1 | - | - | - | GhM_A04G1364.1,GhM_A11G2758.1,GhM_D10G2495.1 | 8 | 2 | Gossypium | Cotton | |||
| TA561:GhM_A10G2697.1,GhM_A10G2698.1,GhM_A10G2699.1;TA871:GhM_D10G2611.1,GhM_D10G2612.1,GhM_D10G2613.1 | AT5G04530 | KCS19; KCS19 (3-KETOACYL-COA SYNTHASE 19); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0009416|response to light stimulus;GO:0008415|acyltransferase activity;GO:0016020|membrane;GO:0009409|response to cold | GhM_A05G4222.1,GhM_D04G0709.1 | 8 | 2 | Gossypium | Cotton | |||
| TA572:GhM_A11G0547.1,GhM_A11G0548.1,GhM_A11G0549.1;TA882:GhM_D11G0535.1,GhM_D11G0539.1,GhM_D11G0541.1 | AT2G23770||AT2G33580 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | GO:0016998|cell wall macromolecule catabolic process;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity | GhM_D11G0536.1,GhM_D11G0540.1 | 8 | 2 | Gossypium | Cotton | |||
| TA602:GhM_A12G0754.1,GhM_A12G0757.1,GhM_A12G0758.1;TA908:GhM_D12G0745.1,GhM_D12G0747.1,GhM_D12G0748.1 | AT3G50740||AT5G66690||AT2G18570 | UGT72E1; UGT72E1 (UDP-glucosyl transferase 72E1); UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups||UGT72E2; UGT72E2; UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0047209|coniferyl-alcohol glucosyltransferase activity;GO:0008152|metabolic process;GO:0009808|lignin metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_D12G0746.1,GhM_A12G0756.1 | 8 | 2 | Gossypium | Cotton | |||
| TA610:GhM_A12G2028.1,GhM_A12G2029.1,GhM_A12G2030.1;TA917:GhM_D12G1936.1,GhM_D12G1937.1,GhM_D12G1938.1 | AT1G05210||AT2G32380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05210.1); Has 102 Blast hits to 102 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 9; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 97, predicted (InterPro:IPR016964); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32380.1); Has 101 Blast hits to 101 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 9; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G1463.1,GhM_D02G1578.1 | 8 | 2 | Gossypium | Cotton | |||
| TA649:GhM_D01G0684.1,GhM_D01G0686.1,GhM_D01G0687.1;TA783:GhM_A01G0717.1,GhM_A01G0719.1,GhM_A01G0720.1 | AT5G54370 | late embryogenesis abundant protein-related / LEA protein-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D05G4130.1,GhM_A04G0261.1 | 8 | 2 | Gossypium | Cotton | |||
| TA708:GhM_D04G1882.1,GhM_D04G1883.1,GhM_D04G1890.1;TA1003:GhM_A04G1393.1,GhM_A04G1394.1,GhM_A04G1402.1 | AT5G08260||AT5G23210 | scpl35; scpl35 (serine carboxypeptidase-like 35); serine-type carboxypeptidase||SCPL34; SCPL34; serine-type carboxypeptidase | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0006508|proteolysis;GO:0005773|vacuole | GhM_D13G0673.1,GhM_A13G0698.1 | 8 | 2 | Gossypium | Cotton | |||
| TA744:GhM_D05G4078.1,GhM_D05G4079.1,GhM_D05G4080.1;TA987:GhM_A04G0308.1,GhM_A04G0309.1,GhM_A04G0312.1 | AT3G15353 | MT3; MT3 (METALLOTHIONEIN 3); copper ion binding | GO:0005507|copper ion binding;GO:0006878|cellular copper ion homeostasis;GO:0005575|cellular_component | GhM_D01G0633.1,GhM_A11G3588.1 | 8 | 2 | Gossypium | Cotton | |||
| TA870:GhM_D10G2448.1,GhM_D10G2449.1,GhM_D10G2450.1;TA2853:GhM_D13G2511.1,GhM_D13G2512.1 | AT3G48310||AT1G13080||AT5G57260||AT3G26210||AT3G26270||AT3G48270 | CYP71B10; CYP71B10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A22; CYP71A22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B2; CYP71B2 (CYTOCHROME P450 71B2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B25; CYP71B25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A26; CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0010286|heat acclimation;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A10G2530.1,GhM_A11G0441.1,GhM_A13G2613.1 | 8 | 2 | Gossypium | Cotton | |||
| TA1020:GhM_A05G1344.1,GhM_A05G1345.1,GhM_A05G1346.1;TA1906:GhM_D05G1359.1,GhM_D05G1360.1;TA1152:GhM_A10G0802.1,GhM_A10G0803.1 | AT1G15780 | unknown protein | GO:0005575|cellular_component | GhM_D10G0839.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1260:GhM_A11G1452.1,GhM_A11G1454.1;TA2585:GhM_D11G1444.1,GhM_D11G1446.1;TA2306:GhM_D08G0789.1,GhM_D08G0790.1 | AT3G22490||AT1G03120||AT3G22500 | late embryogenesis abundant protein, putative / LEA protein, putative||ATECP31; ATECP31||ATRAB28; ATRAB28 | GO:0009845|seed germination;GO:0003674|molecular_function;GO:0007275|multicellular organismal development;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0006873|cellular ion homeostasis;GO:0010226|response to lithium ion;GO:0005730|nucleolus;GO:0005575|cellular_component | GhM_A08G0827.1,GhM_A08G0829.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1400:GhM_A12G1687.1,GhM_A12G1688.1;TA3450:GhM_A08G0967.1,GhM_A08G0968.1;TA2308:GhM_D08G0924.1,GhM_D08G0925.1 | AT1G02816||AT4G02370||AT4G02360 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A11G1333.1,GhM_D11G1334.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1462:GhM_A13G0332.1,GhM_A13G0334.1;TA2777:GhM_D13G0319.1,GhM_D13G0322.1;TA1547:GhM_D01G0040.1,GhM_D01G0045.1 | AT4G38960||AT4G39070||AT2G21320 | zinc finger (B-box type) family protein | GO:0012505|endomembrane system;GO:0045449|regulation of transcription;GO:0010200|response to chitin;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A01G0058.1,GhM_A01G0063.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1514:GhM_A13G2051.1,GhM_A13G2052.1;TA2108:GhM_A01G0373.1,GhM_A01G0375.1;TA2825:GhM_D13G1942.1,GhM_D13G1943.1 | AT3G12900 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0008150|biological_process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A11G3691.1,GhM_D11G3612.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1917:GhM_D05G1791.1,GhM_D05G1792.1;TA3306:GhM_A06G1766.1,GhM_A06G1770.1;TA2051:GhM_D06G1687.1,GhM_D06G1688.1 | AT4G18450||AT3G23240||AT5G47220 | ATERF2, ATERF-2, ERF2; ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2); DNA binding / transcription activator/ transcription factor||ethylene-responsive factor, putative||ERF1, ATERF1; ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0016563|transcription activator activity;GO:0010200|response to chitin;GO:0005634|nucleus;GO:0045941|positive regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006952|defense response;GO:0009867|jasmonic acid mediated signaling pathway;GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway | GhM_A05G1776.1,GhM_A05G1777.1 | 8 | 3 | Gossypium | Cotton | |||
| TA2071:GhM_D06G2241.1,GhM_D06G2250.1;TA3327:GhM_A06G2271.1,GhM_A06G2279.1;TA2072:GhM_D06G2242.1,GhM_D06G2264.1 | AT2G42220||AT5G51120 | rhodanese-like domain-containing protein||PABN1, ATPABN1; PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008143|poly(A) RNA binding;GO:0009535|chloroplast thylakoid membrane;GO:0005575|cellular_component | GhM_A01G2395.1,GhM_D01G2337.1 | 8 | 3 | Gossypium | Cotton | |||
| TA485:GhM_A04G0505.1,GhM_A04G0506.1,GhM_A04G0507.1,GhM_A04G0508.1;TA1979:GhM_D05G3868.1,GhM_D05G3869.1;TA3597:GhM_Scaf066G215.1,GhM_Scaf066G216.1 | AT1G67390||AT1G80960 | F-box protein-related||F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 8 | 3 | Gossypium | Cotton | |||
| TA665:GhM_D02G0155.1,GhM_D02G0156.1,GhM_D02G0157.1;TA2875:GhM_A02G0150.1,GhM_A02G0151.1;TA1635:GhM_D02G0069.1,GhM_D02G0070.1 | AT3G27473||AT4G02190||AT1G55380||AT3G13590||AT5G59930||AT4G13992||AT3G26550 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling cascade; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein kinase C, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT4G16015.1); Has 1471 Blast hits to 614 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 1295; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).||DC1 domain-containing protein||DC1 domain-containing protein / UV-B light-insensitive protein, putative | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A13G0073.1 | 8 | 3 | Gossypium | Cotton | |||
| TA706:GhM_D04G1696.1,GhM_D04G1697.1,GhM_D04G1698.1;TA1000:GhM_A04G1212.1,GhM_A04G1214.1,GhM_A04G1217.1;TA3084:GhM_A04G1213.1,GhM_A04G1216.1 | AT1G45616||AT3G11010||AT2G15080 | AtRLP19; AtRLP19 (Receptor Like Protein 19); kinase/ protein binding||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding||AtRLP34; AtRLP34 (Receptor Like Protein 34); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005575|cellular_component | - | 8 | 3 | Gossypium | Cotton | |||
| TA712:GhM_D04G2113.1,GhM_D04G2115.1,GhM_D04G2116.1;TA2172:GhM_A01G2117.1,GhM_A01G2118.1;TA1609:GhM_D01G2087.1,GhM_D01G2088.1 | AT4G38540 | monooxygenase, putative (MO2) | GO:0008152|metabolic process | GhM_A04G1633.1 | 8 | 3 | Gossypium | Cotton | |||
| TA1186:GhM_A10G2006.1,GhM_A10G2007.1;TA3519:GhM_A09G0465.1,GhM_A09G0466.1;TA2374:GhM_D09G0424.1,GhM_D09G0425.1;TA2468:GhM_D10G0909.1,GhM_D10G0910.1 | AT3G27250 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 8 | 4 | Gossypium | Cotton | |||
| TA1261:GhM_A11G1459.1,GhM_A11G1460.1;TA2586:GhM_D11G1451.1,GhM_D11G1452.1;TA2677:GhM_D12G0042.1,GhM_D12G0043.1;TA1349:GhM_A12G0042.1,GhM_A12G0043.1 | AT3G22600||AT2G48130 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0008289|lipid binding;GO:0031225|anchored to membrane;GO:0006869|lipid transport | - | 8 | 4 | Gossypium | Cotton | |||
| TA1270:GhM_A11G2004.1,GhM_A11G2006.1;TA2948:GhM_A02G2208.1,GhM_A02G2209.1;TA1721:GhM_D03G0061.1,GhM_D03G0062.1;TA2599:GhM_D11G1993.1,GhM_D11G1995.1 | AT4G35880||AT2G17760 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0031225|anchored to membrane | - | 8 | 4 | Gossypium | Cotton | |||
| TA1440:GhM_A12G3056.1,GhM_A12G3057.1;TA3573:GhM_A09G2247.1,GhM_A09G2248.1;TA2425:GhM_D09G2153.1,GhM_D09G2154.1;TA2753:GhM_D12G2940.1,GhM_D12G2941.1 | AT5G53480 | importin beta-2, putative | GO:0005488|binding;GO:0009507|chloroplast;GO:0006886|intracellular protein transport | - | 8 | 4 | Gossypium | Cotton | |||
| TA1655:GhM_D02G0481.1,GhM_D02G0483.1;TA2890:GhM_A02G0487.1,GhM_A02G0488.1;TA2921:GhM_A02G1655.1,GhM_A02G1656.1;TA1749:GhM_D03G0887.1,GhM_D03G0890.1 | AT2G44800||AT2G36690 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008150|biological_process;GO:0009058|biosynthetic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | - | 8 | 4 | Gossypium | Cotton | |||
| TA1816:GhM_D04G0904.1,GhM_D04G0905.1;TA3219:GhM_A05G4014.1,GhM_A05G4015.1;TA3420:GhM_A07G2932.1,GhM_A07G2933.1;TA2287:GhM_D07G2830.1,GhM_D07G2831.1 | AT4G30170||AT5G14130||AT5G67400||AT4G37530 | peroxidase 73 (PER73) (P73) (PRXR11)||peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0009651|response to salt stress;GO:0009055|electron carrier activity | - | 8 | 4 | Gossypium | Cotton | |||
| TA1900:GhM_D05G1198.1,GhM_D05G1199.1;TA3144:GhM_A05G1180.1,GhM_A05G1181.1;TA2344:GhM_D08G2535.1,GhM_D08G2536.1;TA3483:GhM_A08G2594.1,GhM_A08G2595.1 | AT2G28120 | nodulin family protein | GO:0005886|plasma membrane;GO:0006499|N-terminal protein myristoylation | - | 8 | 4 | Gossypium | Cotton | |||
| - | AT3G19240||AT4G33400 | dem protein-related / defective embryo and meristems protein-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), Vacuolar import and degradation, Vid27-related (InterPro:IPR013863); BEST Arabidopsis thaliana protein match is: dem protein-related / defective embryo and meristems protein-related (TAIR:AT4G33400.1); Has 206 Blast hits to 202 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 117; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0005634|nucleus;GO:0006499|N-terminal protein myristoylation;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A01G0100.1,GhM_D01G0080.1,GhM_A03G2484.1,GhM_A06G0186.1,GhM_D06G0193.1,GhM_A03G2485.1,GhM_D02G2505.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G19420 | ATPEN2; ATPEN2 (ARABIDOPSIS THALIANA PTEN 2); phosphatase/ protein tyrosine phosphatase | GO:0016311|dephosphorylation;GO:0016791|phosphatase activity;GO:0004725|protein tyrosine phosphatase activity | GhM_A01G0106.1,GhM_D01G0086.1,GhM_A01G0107.1,GhM_A03G2458.1,GhM_D02G2481.1,GhM_A12G0246.1,GhM_D12G0254.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G15534||AT1G52855 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0195.1,GhM_D01G0175.1,GhM_A03G2133.1,GhM_A01G0715.1,GhM_D01G0683.1,GhM_D05G4127.1,GhM_D02G2153.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G26240 | CLC-D, ATCLC-D; CLC-D (CHLORIDE CHANNEL D); anion channel/ voltage-gated chloride channel | GO:0009826|unidimensional cell growth;GO:0005802|trans-Golgi network;GO:0010038|response to metal ion;GO:0005247|voltage-gated chloride channel activity;GO:0005622|intracellular;GO:0005253|anion channel activity | GhM_A01G0260.1,GhM_D01G0228.1,GhM_A10G1399.1,GhM_D10G1730.1,GhM_D10G1729.1,GhM_D10G1728.1,GhM_D10G1727.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G78630 | emb1473; emb1473 (embryo defective 1473); structural constituent of ribosome | GO:0009507|chloroplast;GO:0009793|embryonic development ending in seed dormancy;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation | GhM_A01G0493.1,GhM_D01G0480.1,GhM_A05G2960.1,GhM_A13G2027.1,GhM_A11G3331.1,GhM_D13G1921.1,GhM_A13G2009.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G29310||AT2G34250 | protein transport protein sec61, putative||P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005739|mitochondrion;GO:0009306|protein secretion;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0016020|membrane | GhM_A01G0519.1,GhM_D01G0496.1,GhM_A05G1718.1,GhM_D05G1728.1,GhM_A06G2549.1,GhM_D06G2542.1,GhM_A08G1353.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G50640 | ERF3, ATERF3; ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3); DNA binding / protein binding / transcription factor/ transcription repressor | GO:0005515|protein binding;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016564|transcription repressor activity | GhM_A01G0900.1,GhM_D01G0858.1,GhM_A04G0118.1,GhM_A11G3485.1,GhM_A08G0328.1,GhM_D08G0311.1,GhM_D11G3398.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G26840 | ORC6, ATORC6; ORC6 (ORIGIN RECOGNITION COMPLEX PROTEIN 6); DNA binding | GO:0000808|origin recognition complex;GO:0003677|DNA binding;GO:0006260|DNA replication | GhM_A01G1058.1,GhM_A13G0883.1,GhM_A01G1548.1,GhM_A07G0643.1,GhM_D13G0828.1,GhM_A08G2891.1,GhM_A12G2080.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G51030 | ATTRX1, ATTRX H1; ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | GO:0045454|cell redox homeostasis;GO:0005829|cytosol;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor | GhM_A01G1262.1,GhM_D01G1228.1,GhM_A05G2121.1,GhM_A10G1110.1,GhM_D10G0986.1,GhM_A11G2093.1,GhM_D11G2072.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G17670 | senescence-associated protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1469.1,GhM_A12G2664.1,GhM_A08G2128.1,GhM_D08G2083.1,GhM_A09G2403.1,GhM_D09G2291.1,GhM_D12G2554.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G58050 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1582.1,GhM_D01G1547.1,GhM_A04G0690.1,GhM_D04G1215.1,GhM_A09G1629.1,GhM_D01G1703.1,GhM_D09G1526.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G38280 | FAC1, ATAMPD; FAC1 (EMBRYONIC FACTOR1); AMP deaminase | GO:0009168|purine ribonucleoside monophosphate biosynthetic process;GO:0005792|microsome;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0005829|cytosol;GO:0003876|AMP deaminase activity | GhM_A01G1690.1,GhM_D01G1652.1,GhM_A09G2048.1,GhM_A04G1201.1,GhM_D04G1677.1,GhM_Scaf001G020.1,GhM_D09G1952.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G02410 | cytochrome c oxidase assembly protein CtaG / Cox11 family | GO:0008150|biological_process;GO:0005507|copper ion binding | GhM_A01G1733.1,GhM_A05G3923.1,GhM_A06G1698.1,GhM_A10G0898.1,GhM_A07G1332.1,GhM_D07G1310.1,GhM_A11G2391.1 | 7 | 0 | Gossypium | Cotton | |||
| - | ATCG00905 | RPS12C, RPS12; chloroplast gene encoding ribosomal protein s12. The gene is located in three distinct loci on the chloroplast genome and is transpliced to make one transcript. | GO:0000312|plastid small ribosomal subunit;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A01G1761.1,GhM_A03G1150.1,GhM_A02G1227.1,GhM_A04G0819.1,GhM_A02G1241.1,GhM_D02G0729.1,GhM_D10G2085.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G27090||AT2G20450 | 60S ribosomal protein L14 (RPL14A)||60S ribosomal protein L14 (RPL14B) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005783|endoplasmic reticulum;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0042254|ribosome biogenesis;GO:0005773|vacuole | GhM_A01G1798.1,GhM_A10G1372.1,GhM_A05G0715.1,GhM_D04G0140.1,GhM_A07G2151.1,GhM_D13G0878.1,GhM_D09G0736.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G55570||AT3G13390||AT3G13400 | sks13; sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase||sks12; sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase||sks11; sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0016491|oxidoreductase activity | GhM_A01G1821.1,GhM_D01G1792.1,GhM_A08G0173.1,GhM_D08G1007.1,GhM_D01G1793.1,GhM_A08G1048.1,GhM_A13G2734.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G01690 | binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005488|binding | GhM_A01G1841.1,GhM_D01G1773.1,GhM_A04G1869.1,GhM_D04G2340.1,GhM_A05G3580.1,GhM_D05G3542.1,GhM_A12G1980.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G27330 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27350.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | GO:0006979|response to oxidative stress;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1910.1,GhM_D01G1888.1,GhM_A06G2052.1,GhM_A12G1949.1,GhM_D12G1864.1,GhM_A03G1689.1,GhM_D02G1762.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G67430||AT1G27400 | 60S ribosomal protein L17 (RPL17A)||60S ribosomal protein L17 (RPL17B) | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G1924.1,GhM_D01G1992.1,GhM_A04G1817.1,GhM_D04G2292.1,GhM_A09G3003.1,GhM_D09G2859.1,GhM_D13G2250.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G13180 | DIS1, ARP3, ATARP3; DIS1 (DISTORTED TRICHOMES 1); ATP binding / actin binding / protein binding / structural constituent of cytoskeleton | GO:0005200|structural constituent of cytoskeleton;GO:0005515|protein binding;GO:0009825|multidimensional cell growth;GO:0005885|Arp2/3 protein complex;GO:0010090|trichome morphogenesis;GO:0000902|cell morphogenesis;GO:0007015|actin filament organization;GO:0003779|actin binding;GO:0005524|ATP binding | GhM_A01G1952.1,GhM_D01G1973.1,GhM_A03G1777.1,GhM_D02G1857.1,GhM_A12G1910.1,GhM_D12G1836.1,GhM_D10G1218.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G27910||AT1G24330 | PUB45, ATPUB45; PUB45 (PLANT U-BOX 45); ubiquitin-protein ligase||armadillo/beta-catenin repeat family protein / U-box domain-containing family protein | GO:0009507|chloroplast;GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination | GhM_A01G2008.1,GhM_D01G1919.1,GhM_A01G2009.1,GhM_D02G1802.1,GhM_A03G1719.1,GhM_A05G3607.1,GhM_D05G3567.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G42340||AT3G46510 | PUB13, ATPUB13; PUB13 (PLANT U-BOX 13); ubiquitin-protein ligase||binding / ubiquitin-protein ligase | GO:0005488|binding;GO:0005634|nucleus;GO:0000151|ubiquitin ligase complex;GO:0005829|cytosol;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination | GhM_A01G2179.1,GhM_D01G2145.1,GhM_A03G2701.1,GhM_D02G2719.1,GhM_A03G2702.1,GhM_A02G1093.1,GhM_D02G1126.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G64950||AT1G70330 | ENT1,AT, ATENT1; ENT1,AT (EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1); nucleoside transmembrane transporter/ nucleoside transmembrane transporter, against a concentration gradient||mitochondrial transcription termination factor-related / mTERF-related | GO:0008150|biological_process;GO:0006810|transport;GO:0003674|molecular_function;GO:0010174|nucleoside transmembrane transporter activity, against a concentration gradient;GO:0005337|nucleoside transmembrane transporter activity;GO:0005739|mitochondrion;GO:0005886|plasma membrane | GhM_A01G2323.1,GhM_A03G0446.1,GhM_D11G2986.1,GhM_D04G1631.1,GhM_A03G0366.1,GhM_A05G3644.1,GhM_A12G1260.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G37130 | NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2; NIA2 (NITRATE REDUCTASE 2); nitrate reductase (NADH)/ nitrate reductase | GO:0009703|nitrate reductase (NADH) activity;GO:0008940|nitrate reductase activity;GO:0042128|nitrate assimilation;GO:0009416|response to light stimulus;GO:0006809|nitric oxide biosynthetic process;GO:0005886|plasma membrane;GO:0009610|response to symbiotic fungus;GO:0005773|vacuole | GhM_A01G2346.1,GhM_D01G2293.1,GhM_A02G0883.1,GhM_D02G0875.1,GhM_A08G0678.1,GhM_D08G0649.1,GhM_A08G0679.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G22890||AT1G19920 | APS2, ASA1; APS2; sulfate adenylyltransferase (ATP)||APS1; APS1 (ATP SULFURYLASE 1); sulfate adenylyltransferase (ATP) | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0009570|chloroplast stroma;GO:0004781|sulfate adenylyltransferase (ATP) activity;GO:0005886|plasma membrane;GO:0000103|sulfate assimilation | GhM_A01G2453.1,GhM_A02G0375.1,GhM_D02G0395.1,GhM_A05G2096.1,GhM_D05G2115.1,GhM_A09G2699.1,GhM_D09G2577.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G11760 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2492.1,GhM_D01G2432.1,GhM_A09G1678.1,GhM_D09G1579.1,GhM_A11G3961.1,GhM_D11G3868.1,GhM_D06G1512.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G2540.1,GhM_A03G1929.1,GhM_A08G1382.1,GhM_A08G1697.1,GhM_D01G1360.1,GhM_D09G1725.1,GhM_D11G0091.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G02230 | haloacid dehalogenase-like hydrolase family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0003824|catalytic activity | GhM_A01G2748.1,GhM_D01G2675.1,GhM_A04G1083.1,GhM_D04G1544.1,GhM_A11G4103.1,GhM_D11G3998.1,GhM_D13G1193.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G09100 | mRNA capping enzyme family protein | GO:0006260|DNA replication;GO:0006281|DNA repair;GO:0003910|DNA ligase (ATP) activity;GO:0006310|DNA recombination;GO:0005524|ATP binding | GhM_A01G2782.1,GhM_D01G2706.1,GhM_A04G1154.1,GhM_D04G1622.1,GhM_A09G0761.1,GhM_D11G4011.1,GhM_A11G4121.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G18410 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2863.1,GhM_A12G0590.1,GhM_A06G0004.1,GhM_D12G0586.1,GhM_D02G2830.1,GhM_A09G0012.1,GhM_D10G2992.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G04410||AT5G43330 | malate dehydrogenase, cytosolic, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0005975|carbohydrate metabolic process;GO:0030060|L-malate dehydrogenase activity;GO:0044262|cellular carbohydrate metabolic process;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity;GO:0010043|response to zinc ion;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0009570|chloroplast stroma;GO:0016615|malate dehydrogenase activity;GO:0016020|membrane;GO:0005773|vacuole;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0009507|chloroplast;GO:0006108|malate metabolic process;GO:0005634|nucleus;GO:0005488|binding;GO:0006096|glycolysis | GhM_A02G0443.1,GhM_D02G0438.1,GhM_A09G2475.1,GhM_D09G2362.1,GhM_A10G1317.1,GhM_D12G1220.1,GhM_A12G1287.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G06400||AT5G18620 | CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding||CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / nucleosome binding | GO:0008094|DNA-dependent ATPase activity;GO:0031491|nucleosome binding;GO:0005634|nucleus;GO:0016049|cell growth;GO:0043044|ATP-dependent chromatin remodeling;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0006338|chromatin remodeling;GO:0009553|embryo sac development;GO:0004386|helicase activity;GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;GO:0005524|ATP binding;GO:0016585|chromatin remodeling complex | GhM_A02G0534.1,GhM_D02G0520.1,GhM_A09G2930.1,GhM_D09G2794.1,GhM_A10G2021.1,GhM_D10G1962.1,GhM_A11G1711.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G16940 | calmodulin-binding protein | GO:0008150|biological_process;GO:0030528|transcription regulator activity;GO:0005516|calmodulin binding;GO:0005575|cellular_component | GhM_A02G0606.1,GhM_D02G0599.1,GhM_A09G0914.1,GhM_D09G0849.1,GhM_A10G2152.1,GhM_D10G2088.1,GhM_D12G0948.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G22780 | PFL, RPS18A, PFL1; PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding / structural constituent of ribosome | GO:0015935|small ribosomal subunit;GO:0003723|RNA binding;GO:0022627|cytosolic small ribosomal subunit;GO:0003676|nucleic acid binding;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0005618|cell wall;GO:0006412|translation;GO:0005886|plasma membrane;GO:0006413|translational initiation | GhM_A02G0730.1,GhM_A05G2760.1,GhM_A05G3051.1,GhM_A06G1420.1,GhM_D02G0722.1,GhM_D05G2763.1,GhM_D06G1418.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G39940 | COI1; COI1 (CORONATINE INSENSITIVE 1); protein binding / ubiquitin-protein ligase | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0009861|jasmonic acid and ethylene-dependent systemic resistance;GO:0009867|jasmonic acid mediated signaling pathway;GO:0009611|response to wounding;GO:0010118|stomatal movement;GO:0006952|defense response;GO:0009753|response to jasmonic acid stimulus;GO:0031348|negative regulation of defense response;GO:0009625|response to insect;GO:0004842|ubiquitin-protein ligase activity;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium | GhM_A02G0774.1,GhM_D04G0794.1,GhM_A05G3878.1,GhM_A10G2895.1,GhM_D10G2874.1,GhM_D06G2136.1,GhM_A06G2157.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G44170 | ALDH3H1, ALDH4; ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1); 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) | GO:0004029|aldehyde dehydrogenase (NAD) activity;GO:0004028|3-chloroallyl aldehyde dehydrogenase activity;GO:0009737|response to abscisic acid stimulus;GO:0009536|plastid;GO:0005783|endoplasmic reticulum;GO:0009651|response to salt stress;GO:0016020|membrane;GO:0005773|vacuole;GO:0009269|response to desiccation | GhM_A02G0860.1,GhM_D02G0849.1,GhM_A05G2642.1,GhM_D05G2655.1,GhM_A05G2641.1,GhM_A06G0530.1,GhM_D06G0542.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G11050 | protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A02G0935.1,GhM_A03G2528.1,GhM_D02G2551.1,GhM_A09G1095.1,GhM_A12G0302.1,GhM_D12G0304.1,GhM_A12G0303.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G78880 | balbiani ring 1-related / BR1-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A02G1054.1,GhM_D02G1278.1,GhM_A05G1265.1,GhM_D05G1282.1,GhM_A06G1397.1,GhM_A10G0042.1,GhM_D10G0031.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G50920||AT1G10300 | GTP-binding protein-related | GO:0000166|nucleotide binding;GO:0016020|membrane;GO:0005525|GTP binding | GhM_A02G1314.1,GhM_D03G0929.1,GhM_A12G1511.1,GhM_D12G1451.1,GhM_D10G2663.1,GhM_D12G1452.1,GhM_D12G1453.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G65020 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 53 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 18; Metazoa - 9; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | GO:0005886|plasma membrane | GhM_A02G1680.1,GhM_D03G0590.1,GhM_A08G2859.1,GhM_A08G1297.1,GhM_A08G1357.1,GhM_D08G2802.1,GhM_A11G2664.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G10290 | leucine-rich repeat family protein / protein kinase family protein | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A02G1854.1,GhM_A11G0627.1,GhM_D11G0635.1,GhM_A11G2389.1,GhM_D11G2499.1,GhM_D03G0408.1,GhM_D03G0409.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G64970 | mitochondrial substrate carrier family protein | GO:0006810|transport;GO:0005488|binding;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0006839|mitochondrial transport;GO:0005215|transporter activity;GO:0005743|mitochondrial inner membrane | GhM_A02G1866.1,GhM_D03G0394.1,GhM_A05G2542.1,GhM_D05G2551.1,GhM_D11G1623.1,GhM_D11G2517.1,GhM_A11G2375.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G65730||AT4G37800 | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | GO:0012505|endomembrane system;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0005975|carbohydrate metabolic process;GO:0009414|response to water deprivation;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0006073|cellular glucan metabolic process;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0005618|cell wall | GhM_A02G1934.1,GhM_D03G0334.1,GhM_A11G0597.1,GhM_D11G0592.1,GhM_A11G2508.1,GhM_D11G2381.1,GhM_D12G0979.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G37680 | HHP4; HHP4 (heptahelical protein 4); receptor | GO:0004872|receptor activity;GO:0009725|response to hormone stimulus;GO:0016021|integral to membrane;GO:0009744|response to sucrose stimulus | GhM_A02G1955.1,GhM_D03G0311.1,GhM_A11G0591.1,GhM_D11G0586.1,GhM_A11G2540.1,GhM_D11G2352.1,GhM_A13G1374.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G36800 | RCE1; RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase | GO:0019788|NEDD8 ligase activity;GO:0009733|response to auxin stimulus;GO:0019787|small conjugating protein ligase activity;GO:0009790|embryonic development;GO:0005575|cellular_component | GhM_A02G2099.1,GhM_A11G0542.1,GhM_D11G0529.1,GhM_A11G2175.1,GhM_D11G2150.1,GhM_A12G0759.1,GhM_D12G0749.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G31970 | STRS1; STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding | GO:0003676|nucleic acid binding;GO:0005524|ATP binding;GO:0004386|helicase activity | GhM_A03G0027.1,GhM_D03G2076.1,GhM_D04G0464.1,GhM_D02G1430.1,GhM_D08G2348.1,GhM_D06G1042.1,GhM_D10G2118.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G18020 | APRR2, PRR2; APRR2; transcription factor/ two-component response regulator | GO:0003700|transcription factor activity;GO:0007623|circadian rhythm;GO:0000156|two-component response regulator activity | GhM_A03G0087.1,GhM_D03G2015.1,GhM_A08G2108.1,GhM_D08G2061.1,GhM_A12G2651.1,GhM_D05G2745.1,GhM_D12G2541.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G47120 | ATBI-1, BI-1, ATBI1; ATBI1 (BAX INHIBITOR 1) | GO:0000038|very-long-chain fatty acid metabolic process;GO:0042981|regulation of apoptosis;GO:0006983|ER overload response;GO:0005737|cytoplasm;GO:0006915|apoptosis;GO:0009414|response to water deprivation;GO:0006916|anti-apoptosis;GO:0005635|nuclear envelope;GO:0043069|negative regulation of programmed cell death;GO:0005783|endoplasmic reticulum | GhM_A03G0116.1,GhM_A08G2166.1,GhM_D08G2122.1,GhM_A11G0319.1,GhM_D11G0305.1,GhM_A12G2686.1,GhM_D12G2574.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G12390 | cornichon family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A03G0210.1,GhM_A12G2774.1,GhM_A08G2281.1,GhM_D08G2234.1,GhM_A09G2368.1,GhM_D09G2255.1,GhM_D12G2661.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G0317.1,GhM_A04G0535.1,GhM_A13G1132.1,GhM_A06G1369.1,GhM_A06G1410.1,GhM_A09G0075.1,GhM_D05G2741.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G23500||AT3G48950 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity;GO:0005618|cell wall | GhM_A03G0327.1,GhM_D08G1516.1,GhM_A08G1566.1,GhM_A11G0140.1,GhM_D11G0136.1,GhM_A12G3134.1,GhM_D12G3020.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G51770||AT5G58550 | EOL2; EOL2 (ETO1-LIKE 2); binding / protein binding||ETO1; ETO1 (ETHYLENE OVERPRODUCER 1); protein binding, bridging | GO:0009693|ethylene biosynthetic process;GO:0005515|protein binding;GO:0010364|regulation of ethylene biosynthetic process;GO:0010182|sugar mediated signaling pathway;GO:0048528|post-embryonic root development;GO:0043161|proteasomal ubiquitin-dependent protein catabolic process;GO:0017145|stem cell division;GO:0005575|cellular_component;GO:0030674|protein binding, bridging | GhM_A03G0403.1,GhM_D03G1722.1,GhM_A08G2617.1,GhM_D08G2557.1,GhM_A08G2618.1,GhM_A13G2982.1,GhM_D13G2886.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G07150||AT2G30040 | MAPKKK13; MAPKKK13; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||MAPKKK14; MAPKKK14; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G0418.1,GhM_D03G1710.1,GhM_A08G2602.1,GhM_D08G2544.1,GhM_A13G2976.1,GhM_D13G2880.1,GhM_D05G1203.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G59950 | RNA and export factor-binding protein, putative | GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0009507|chloroplast | GhM_A03G0556.1,GhM_D03G1576.1,GhM_A07G1164.1,GhM_D07G1147.1,GhM_A08G0052.1,GhM_D13G2823.1,GhM_A13G2923.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G06475||AT5G46295 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0560.1,GhM_A06G2530.1,GhM_D06G2524.1,GhM_A10G0424.1,GhM_A05G1676.1,GhM_D05G1686.1,GhM_D10G0414.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G06720 | INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 7944 Blast hits to 5342 proteins in 373 species: Archae - 33; Bacteria - 667; Metazoa - 2609; Fungi - 1045; Plants - 414; Viruses - 80; Other Eukaryotes - 3096 (source: NCBI BLink). | GO:0005634|nucleus;GO:0042254|ribosome biogenesis | GhM_A03G0573.1,GhM_D10G2422.1,GhM_A10G2506.1,GhM_D03G1548.1,GhM_D03G1551.1,GhM_D03G1549.1,GhM_D03G1550.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G55440 | ATCTIMC, TPI; TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0010043|response to zinc ion;GO:0006096|glycolysis;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0004807|triose-phosphate isomerase activity;GO:0009651|response to salt stress;GO:0044262|cellular carbohydrate metabolic process;GO:0005829|cytosol;GO:0005618|cell wall;GO:0018119|peptidyl-cysteine S-nitrosylation;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A03G0597.1,GhM_D03G1528.1,GhM_A05G1049.1,GhM_D05G1060.1,GhM_A08G0062.1,GhM_D10G2720.1,GhM_A10G2786.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G76560 | CP12-3; CP12-3 | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A03G0752.1,GhM_D10G2288.1,GhM_A05G2521.1,GhM_A10G2370.1,GhM_A07G1765.1,GhM_A05G3190.1,GhM_D05G3190.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G50920 | CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1; CLPC1; ATP binding / ATP-dependent peptidase/ ATPase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009532|plastid stroma;GO:0045037|protein import into chloroplast stroma;GO:0005524|ATP binding;GO:0005739|mitochondrion;GO:0009658|chloroplast organization;GO:0009570|chloroplast stroma;GO:0010380|regulation of chlorophyll biosynthetic process;GO:0005618|cell wall;GO:0016887|ATPase activity;GO:0009535|chloroplast thylakoid membrane;GO:0031897|Tic complex | GhM_A03G0763.1,GhM_D03G1337.1,GhM_A07G0587.1,GhM_D07G0574.1,GhM_A11G3821.1,GhM_A12G2456.1,GhM_D11G3739.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G25130 | peptide methionine sulfoxide reductase, putative | GO:0009570|chloroplast stroma | GhM_A03G0819.1,GhM_D03G1283.1,GhM_A09G3023.1,GhM_D09G2884.1,GhM_A12G2487.1,GhM_D12G2371.1,GhM_D13G0004.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G51150 | unknown protein | GO:0009507|chloroplast | GhM_A03G0828.1,GhM_D03G1275.1,GhM_A07G0559.1,GhM_D07G0548.1,GhM_A09G3020.1,GhM_D09G2880.1,GhM_D13G0007.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G26618||AT5G47880 | ERF1-3; ERF1-3 (eukaryotic release factor 1-3); translation release factor||ERF1-1; ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor | GO:0003747|translation release factor activity;GO:0006415|translational termination;GO:0005737|cytoplasm | GhM_A03G0894.1,GhM_D03G1132.1,GhM_A07G2270.1,GhM_D07G2200.1,GhM_A11G0397.1,GhM_D11G0379.1,GhM_D11G0378.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G65620||AT2G03350 | unknown protein||peptidase M3 family protein / thimet oligopeptidase family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0009570|chloroplast stroma;GO:0005829|cytosol;GO:0006508|proteolysis;GO:0005575|cellular_component | GhM_A03G0915.1,GhM_D03G1156.1,GhM_A12G1093.1,GhM_A11G2476.1,GhM_D12G0956.1,GhM_D11G2418.1,GhM_D11G2419.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G33040 | ATP synthase gamma chain, mitochondrial (ATPC) | GO:0005730|nucleolus;GO:0009507|chloroplast;GO:0005618|cell wall | GhM_A03G0942.1,GhM_D03G1177.1,GhM_A07G0821.1,GhM_D07G0821.1,GhM_A12G2328.1,GhM_D12G2221.1,GhM_D06G1310.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G26690||AT2G03290 | emp24/gp25L/p24 family protein||protein transmembrane transporter | GO:0012505|endomembrane system;GO:0008320|protein transmembrane transporter activity;GO:0006810|transport;GO:0006886|intracellular protein transport;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A03G1376.1,GhM_D02G1500.1,GhM_A06G2037.1,GhM_A13G0934.1,GhM_A05G3528.1,GhM_D05G3475.1,GhM_D13G0886.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G21690||AT1G61890 | MATE efflux family protein | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A03G1461.1,GhM_D02G1577.1,GhM_A05G1912.1,GhM_D05G1926.1,GhM_A10G0149.1,GhM_D10G0138.1,GhM_A10G0150.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G39650 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1499.1,GhM_D10G2717.1,GhM_A05G4189.1,GhM_D04G0734.1,GhM_A10G2783.1,GhM_D02G1610.1,GhM_D02G1611.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G71110 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G1679.1,GhM_D02G1736.1,GhM_A12G1957.1,GhM_A12G1958.1,GhM_D12G1872.1,GhM_D03G1388.1,GhM_D11G2137.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G70330||AT3G57940||AT1G10490 | unknown protein||ENT1,AT, ATENT1; ENT1,AT (EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1); nucleoside transmembrane transporter/ nucleoside transmembrane transporter, against a concentration gradient | GO:0008150|biological_process;GO:0006810|transport;GO:0003674|molecular_function;GO:0010174|nucleoside transmembrane transporter activity, against a concentration gradient;GO:0005337|nucleoside transmembrane transporter activity;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A03G1790.1,GhM_A08G1325.1,GhM_D13G0136.1,GhM_A11G2119.1,GhM_D07G2578.1,GhM_A12G1146.1,GhM_D12G1155.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G52920||AT1G32440 | PKp3; PKp3 (plastidial pyruvate kinase 3); pyruvate kinase||PKP1, PKP-BETA1, PKP2; PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1); pyruvate kinase | GO:0009507|chloroplast;GO:0006633|fatty acid biosynthetic process;GO:0046686|response to cadmium ion;GO:0048316|seed development;GO:0005739|mitochondrion;GO:0006629|lipid metabolic process;GO:0009570|chloroplast stroma;GO:0006096|glycolysis;GO:0004743|pyruvate kinase activity | GhM_A03G1889.1,GhM_A12G3109.1,GhM_A08G1295.1,GhM_D08G1300.1,GhM_A11G0330.1,GhM_D11G0317.1,GhM_D12G2994.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G32640 | ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1; MYC2; DNA binding / transcription activator/ transcription factor | GO:0048364|root development;GO:0016563|transcription activator activity;GO:0009963|positive regulation of flavonoid biosynthetic process;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0009611|response to wounding;GO:0009759|indole glucosinolate biosynthetic process;GO:0045941|positive regulation of transcription;GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006568|tryptophan metabolic process;GO:0002213|defense response to insect;GO:0051090|regulation of transcription factor activity;GO:0009867|jasmonic acid mediated signaling pathway;GO:0009269|response to desiccation | GhM_A03G2056.1,GhM_A12G2624.1,GhM_A08G2077.1,GhM_D08G2031.1,GhM_A09G2428.1,GhM_D09G2310.1,GhM_D12G2512.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G11360 | universal stress protein (USP) family protein | GO:0006950|response to stress;GO:0005886|plasma membrane;GO:0005829|cytosol | GhM_A03G2161.1,GhM_D02G2185.1,GhM_A13G0660.1,GhM_A13G0676.1,GhM_D13G0709.1,GhM_D13G0693.1,GhM_D13G0710.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G22104 | phototropic-responsive NPH3 protein-related | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0004871|signal transducer activity | GhM_A03G2177.1,GhM_D02G2199.1,GhM_A04G1383.1,GhM_D04G1873.1,GhM_A12G1756.1,GhM_D12G1706.1,GhM_A12G1755.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G22040 | kelch repeat-containing F-box family protein | GO:0009507|chloroplast;GO:0006499|N-terminal protein myristoylation;GO:0003674|molecular_function | GhM_A03G2280.1,GhM_D02G2304.1,GhM_A12G0149.1,GhM_A13G0782.1,GhM_A12G0150.1,GhM_D12G0158.1,GhM_D13G0604.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G64300 | ATGCH, GCH, ATRIBA1, RFD1; ATGCH; 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II | GO:0009507|chloroplast;GO:0008686|3,4-dihydroxy-2-butanone-4-phosphate synthase activity;GO:0009231|riboflavin biosynthetic process;GO:0003935|GTP cyclohydrolase II activity;GO:0016020|membrane | GhM_A03G2323.1,GhM_D02G2355.1,GhM_A04G1486.1,GhM_D04G1976.1,GhM_A10G0979.1,GhM_A10G0980.1,GhM_D10G1103.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G38710 | glycine-rich protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003743|translation initiation factor activity | GhM_A03G2632.1,GhM_D02G2650.1,GhM_A12G0428.1,GhM_A04G1600.1,GhM_D04G2079.1,GhM_D12G0368.1,GhM_Scaf001G030.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G54240||AT4G27350 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G0001.1,GhM_D05G4142.1,GhM_A04G0244.1,GhM_D13G1821.1,GhM_A13G1928.1,GhM_A08G0295.1,GhM_D08G0284.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G54310 | AGD5; AGD5 (ARF-GAP domain 5); ARF GTPase activator/ DNA binding / zinc ion binding | GO:0008060|ARF GTPase activator activity;GO:0005802|trans-Golgi network;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005829|cytosol;GO:0005768|endosome;GO:0010227|floral organ abscission;GO:0032857|activation of ARF GTPase activity;GO:0008270|zinc ion binding | GhM_A04G0252.1,GhM_D05G4137.1,GhM_D05G1866.1,GhM_A10G0220.1,GhM_D10G0205.1,GhM_A13G1932.1,GhM_D13G1828.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G28715||AT2G33530||AT3G28710 | scpl46; scpl46 (serine carboxypeptidase-like 46); serine-type carboxypeptidase||H+-transporting two-sector ATPase, putative | GO:0009505|plant-type cell wall;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0015986|ATP synthesis coupled proton transport;GO:0000325|plant-type vacuole;GO:0015078|hydrogen ion transmembrane transporter activity;GO:0015992|proton transport;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0005773|vacuole | GhM_A04G0876.1,GhM_A07G2777.1,GhM_A09G0299.1,GhM_D09G0269.1,GhM_D07G2682.1,GhM_A07G2778.1,GhM_D04G1333.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G03280 | EIN2, PIR2, CKR1, ERA3, ORE3, ORE2, ATEIN2; EIN2 (ETHYLENE INSENSITIVE 2); transporter | GO:0016020|membrane;GO:0005215|transporter activity | GhM_A04G0966.1,GhM_D04G1423.1,GhM_A09G1865.1,GhM_D09G1761.1,GhM_A11G4071.1,GhM_D11G3968.1,GhM_D09G1183.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G68810||AT2G41130 | basic helix-loop-helix (bHLH) family protein | GO:0009941|chloroplast envelope;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A04G1060.1,GhM_A10G0339.1,GhM_A07G2385.1,GhM_D10G0327.1,GhM_A08G2836.1,GhM_D05G1767.1,GhM_A05G1757.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G01600||AT2G40300||AT3G11050 | ATFER4; ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding||ATFER1, FER1; ATFER1; ferric iron binding / iron ion binding||ATFER2; ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | GO:0009941|chloroplast envelope;GO:0042542|response to hydrogen peroxide;GO:0009908|flower development;GO:0006879|cellular iron ion homeostasis;GO:0015979|photosynthesis;GO:0055072|iron ion homeostasis;GO:0016491|oxidoreductase activity;GO:0010043|response to zinc ion;GO:0000302|response to reactive oxygen species;GO:0009617|response to bacterium;GO:0009570|chloroplast stroma;GO:0006826|iron ion transport;GO:0016020|membrane;GO:0008199|ferric iron binding;GO:0005506|iron ion binding;GO:0010039|response to iron ion;GO:0009507|chloroplast;GO:0005488|binding;GO:0009579|thylakoid;GO:0048366|leaf development;GO:0046914|transition metal ion binding;GO:0009535|chloroplast thylakoid membrane;GO:0009409|response to cold | GhM_A04G1234.1,GhM_D09G1964.1,GhM_A05G3501.1,GhM_D05G3447.1,GhM_A09G2059.1,GhM_D10G2944.1,GhM_A10G2992.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G28260 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G1347.1,GhM_D04G1831.1,GhM_A13G0631.1,GhM_D13G0736.1,GhM_A13G0632.1,GhM_D13G0734.1,GhM_D13G0735.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G29150 | ATS9, RPN6; ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9) | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0030163|protein catabolic process;GO:0008541|proteasome regulatory particle, lid subcomplex | GhM_A04G1911.1,GhM_D04G2381.1,GhM_A12G2106.1,GhM_D12G2008.1,GhM_A13G0936.1,GhM_D13G0888.1,GhM_A13G0937.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G21240||AT1G51680 | 4CL2, AT4CL2; 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase||4CL1, 4CL.1, AT4CL1; 4CL1 (4-COUMARATE:COA LIGASE 1); 4-coumarate-CoA ligase | GO:0016207|4-coumarate-CoA ligase activity;GO:0009620|response to fungus;GO:0009611|response to wounding;GO:0009411|response to UV;GO:0009698|phenylpropanoid metabolic process;GO:0005575|cellular_component | GhM_A05G0062.1,GhM_D05G0062.1,GhM_A05G1595.1,GhM_D05G1609.1,GhM_A10G0545.1,GhM_D10G0519.1,GhM_Scaf128G283.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G25620||AT3G51470 | protein phosphatase 2C, putative / PP2C, putative | GO:0006470|protein amino acid dephosphorylation;GO:0004722|protein serine/threonine phosphatase activity;GO:0008287|protein serine/threonine phosphatase complex;GO:0003824|catalytic activity | GhM_A05G0132.1,GhM_D05G0141.1,GhM_A06G0589.1,GhM_D06G0593.1,GhM_D04G1507.1,GhM_D10G1522.1,GhM_D13G1171.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G37990 | ribosome biogenesis regulatory protein (RRS1) family protein | GO:0005730|nucleolus;GO:0042254|ribosome biogenesis | GhM_A05G0183.1,GhM_D07G0444.1,GhM_A07G0447.1,GhM_D05G0192.1,GhM_D08G0200.1,GhM_A08G0211.1,GhM_D08G0199.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G19990 | RPT6A, ATSUG1; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0016887|ATPase activity;GO:0008540|proteasome regulatory particle, base subcomplex;GO:0005634|nucleus;GO:0005886|plasma membrane | GhM_A05G0212.1,GhM_D05G0216.1,GhM_A06G0689.1,GhM_A13G2603.1,GhM_D13G2504.1,GhM_D06G0697.1,GhM_D11G3096.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G53870||AT5G35530 | 40S ribosomal protein S3 (RPS3B)||40S ribosomal protein S3 (RPS3C) | GO:0022626|cytosolic ribosome;GO:0003723|RNA binding;GO:0022627|cytosolic small ribosomal subunit;GO:0009651|response to salt stress;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0016020|membrane | GhM_A05G0355.1,GhM_D05G0373.1,GhM_A05G0423.1,GhM_D05G0443.1,GhM_A07G0167.1,GhM_D07G0166.1,GhM_A07G0234.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G26150||AT5G12000||AT4G31230 | kinase||protein kinase family protein | GO:0006950|response to stress;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0438.1,GhM_D05G0459.1,GhM_A06G1040.1,GhM_D06G1043.1,GhM_A07G2985.1,GhM_A08G3231.1,GhM_D08G3163.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G11850 | protein kinase family protein | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity | GhM_A05G0462.1,GhM_D05G0485.1,GhM_A06G1077.1,GhM_D07G0257.1,GhM_A07G0258.1,GhM_D06G1080.1,GhM_D06G1081.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G32850||AT2G25850 | nPAP; nPAP (NUCLEAR POLY(A) POLYMERASE); nucleotidyltransferase/ protein binding||nucleotidyltransferase family protein | GO:0016779|nucleotidyltransferase activity;GO:0005634|nucleus;GO:0005515|protein binding;GO:0043631|RNA polyadenylation | GhM_A05G0494.1,GhM_D07G0285.1,GhM_A06G1102.1,GhM_A09G1096.1,GhM_A06G1103.1,GhM_D09G1031.1,GhM_A07G0283.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G11650 | hydrolase, alpha/beta fold family protein | GO:0009507|chloroplast;GO:0016787|hydrolase activity | GhM_A05G0505.1,GhM_D05G0527.1,GhM_A05G1117.1,GhM_A07G0288.1,GhM_A06G1113.1,GhM_D06G1126.1,GhM_D07G0291.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G25800 | INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20010.2); Has 242 Blast hits to 156 proteins in 35 species: Archae - 0; Bacteria - 8; Metazoa - 36; Fungi - 18; Plants - 94; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). | GO:0008150|biological_process | GhM_A05G0512.1,GhM_D05G0534.1,GhM_A08G3194.1,GhM_D08G3119.1,GhM_A13G2473.1,GhM_D13G2367.1,GhM_D13G2366.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G31750 | WIN2; WIN2 (HOPW1-1-INTERACTING 2); protein serine/threonine phosphatase | GO:0006470|protein amino acid dephosphorylation;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity;GO:0042742|defense response to bacterium | GhM_A05G0683.1,GhM_D08G3161.1,GhM_A06G1287.1,GhM_D06G1296.1,GhM_A08G3229.1,GhM_D05G0700.1,GhM_D05G0701.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G31350 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0716.1,GhM_D05G0737.1,GhM_A07G0006.1,GhM_D07G0005.1,GhM_A07G0007.1,GhM_A13G2393.1,GhM_D13G2292.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G03120 | ATSPP; ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase | GO:0009555|pollen development;GO:0009846|pollen germination;GO:0005789|endoplasmic reticulum membrane;GO:0005783|endoplasmic reticulum | GhM_A05G0785.1,GhM_D05G0811.1,GhM_A07G1455.1,GhM_D07G1432.1,GhM_A13G2829.1,GhM_D13G2713.1,GhM_D10G1721.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G35940 | BLH1, EDA29; BLH1 (BEL1-LIKE HOMEODOMAIN 1); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0042803|protein homodimerization activity;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010201|response to continuous far red light stimulus by the high-irradiance response system;GO:0046982|protein heterodimerization activity;GO:0010197|polar nucleus fusion;GO:0009610|response to symbiotic fungus | GhM_A05G0861.1,GhM_D05G0882.1,GhM_D07G1340.1,GhM_A07G1362.1,GhM_D07G1341.1,GhM_A09G1308.1,GhM_D09G1238.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G55110 | AtIDD7; AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A05G0899.1,GhM_A10G0653.1,GhM_A05G1507.1,GhM_D05G1522.1,GhM_A12G1332.1,GhM_D10G0622.1,GhM_A13G1194.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G08200 | AXS2; AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2); UDP-glucuronate decarboxylase | GO:0009226|nucleotide-sugar biosynthetic process;GO:0048040|UDP-glucuronate decarboxylase activity;GO:0005737|cytoplasm;GO:0048046|apoplast | GhM_A05G0928.1,GhM_D05G0948.1,GhM_A07G1283.1,GhM_D07G1261.1,GhM_A09G1219.1,GhM_D09G1151.1,GhM_A13G2871.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G40270||AT5G07150||AT1G25320 | leucine-rich repeat transmembrane protein kinase, putative||leucine-rich repeat family protein||protein kinase family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G1193.1,GhM_D05G1212.1,GhM_D08G2558.1,GhM_A08G2619.1,GhM_D11G1998.1,GhM_D02G1710.1,GhM_D12G0274.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G24490||AT3G58630 | transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G1418.1,GhM_A06G2434.1,GhM_D06G2431.1,GhM_A10G0886.1,GhM_Scaf046G178.1,GhM_D05G1434.1,GhM_A05G1419.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G55150||AT5G63120 | ethylene-responsive DEAD box RNA helicase, putative (RH30)||DEAD box RNA helicase, putative (RH20) | GO:0005524|ATP binding;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005575|cellular_component | GhM_A05G1503.1,GhM_D10G0636.1,GhM_A10G0668.1,GhM_D05G1517.1,GhM_A11G0500.1,GhM_D11G0482.1,GhM_D04G0501.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G54115 | ATCCX4, CCX4; CCX4 (CATION CALCIUM EXCHANGER 4); cation:cation antiporter | GO:0006812|cation transport;GO:0015491|cation:cation antiporter activity | GhM_A05G1561.1,GhM_D05G1575.1,GhM_A05G3403.1,GhM_D08G2682.1,GhM_D06G1890.1,GhM_A06G1899.1,GhM_D05G3741.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G53750 | RPT1A; RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | GO:0005886|plasma membrane | GhM_A05G1592.1,GhM_A10G0550.1,GhM_A06G2501.1,GhM_D06G2498.1,GhM_D05G1606.1,GhM_D10G0525.1,GhM_D08G0949.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G34410||AT3G06550 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 185 Blast hits to 183 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 97; Fungi - 25; Plants - 56; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).||O-acetyltransferase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G1685.1,GhM_D05G1693.1,GhM_A06G2535.1,GhM_D06G2528.1,GhM_A10G2196.1,GhM_D10G2125.1,GhM_D03G0695.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G70320||AT1G55860 | UPL2; UPL2 (UBIQUITIN-PROTEIN LIGASE 2); ubiquitin-protein ligase||UPL1; UPL1 (UBIQUITIN-PROTEIN LIGASE 1); ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0000151|ubiquitin ligase complex;GO:0005739|mitochondrion;GO:0005829|cytosol;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0016020|membrane | GhM_A05G2447.1,GhM_D05G2459.1,GhM_A05G2448.1,GhM_A05G2972.1,GhM_D05G2978.1,GhM_A06G0326.1,GhM_D06G0339.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G05545 | transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein | GO:0003677|DNA binding;GO:0004842|ubiquitin-protein ligase activity | GhM_A05G2467.1,GhM_A13G1499.1,GhM_A11G3365.1,GhM_D11G3278.1,GhM_A13G2333.1,GhM_D13G2224.1,GhM_D13G1382.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G22410||AT4G33510 | 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative||DHS2; DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase); 3-deoxy-7-phosphoheptulonate synthase | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0009073|aromatic amino acid family biosynthetic process;GO:0009423|chorismate biosynthetic process;GO:0003849|3-deoxy-7-phosphoheptulonate synthase activity;GO:0016020|membrane | GhM_A05G2519.1,GhM_D05G2531.1,GhM_A08G2146.1,GhM_A09G2394.1,GhM_D09G2283.1,GhM_A13G0812.1,GhM_D13G0578.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G71697 | ATCK1, CK; ATCK1 (CHOLINE KINASE 1); choline kinase | GO:0004103|choline kinase activity;GO:0009611|response to wounding;GO:0005575|cellular_component | GhM_A05G2764.1,GhM_D05G2767.1,GhM_A05G3053.1,GhM_D05G3052.1,GhM_A05G3054.1,GhM_A06G1419.1,GhM_D06G1421.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G71410||AT1G22870 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005488|binding;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G2803.1,GhM_D05G2803.1,GhM_A05G3102.1,GhM_D05G3102.1,GhM_A08G2977.1,GhM_D08G2915.1,GhM_A08G2976.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G07960 | phosphatidylinositol-4-phosphate 5-kinase family protein | GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0005524|ATP binding;GO:0046488|phosphatidylinositol metabolic process;GO:0016307|phosphatidylinositol phosphate kinase activity;GO:0005575|cellular_component | GhM_A05G3180.1,GhM_D05G3182.1,GhM_A05G4781.1,GhM_D04G0188.1,GhM_A05G4782.1,GhM_D10G2269.1,GhM_A10G2349.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G52250 | DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0008380|RNA splicing | GhM_A05G3382.1,GhM_D05G3356.1,GhM_A10G2621.1,GhM_A05G3383.1,GhM_D10G2535.1,GhM_A13G0275.1,GhM_D13G0260.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G55020 | RabGAP/TBC domain-containing protein | GO:0032313|regulation of Rab GTPase activity;GO:0005097|RAB GTPase activator activity;GO:0005829|cytosol | GhM_A05G3401.1,GhM_D05G3378.1,GhM_A10G2636.1,GhM_D10G2550.1,GhM_A13G0256.1,GhM_D13G0243.1,GhM_A13G0255.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G46110 | APE2, TPT; APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2); antiporter/ triose-phosphate transmembrane transporter | GO:0015297|antiporter activity;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006810|transport;GO:0016020|membrane | GhM_A05G3539.1,GhM_D05G3486.1,GhM_A09G1011.1,GhM_D09G0945.1,GhM_A10G0304.1,GhM_D10G0289.1,GhM_D13G2042.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G44530||AT2G35390 | ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative||ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) | GO:0000287|magnesium ion binding;GO:0009507|chloroplast;GO:0009156|ribonucleoside monophosphate biosynthetic process;GO:0009116|nucleoside metabolic process;GO:0044249|cellular biosynthetic process | GhM_A05G3956.1,GhM_D04G0861.1,GhM_A08G2104.1,GhM_D08G2057.1,GhM_A12G2645.1,GhM_D12G2533.1,GhM_A11G3266.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G11410 | ATPP2CA, AHG3, PP2CA; PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase | GO:0005515|protein binding;GO:0009737|response to abscisic acid stimulus;GO:0008287|protein serine/threonine phosphatase complex;GO:0004721|phosphoprotein phosphatase activity;GO:0009788|negative regulation of abscisic acid mediated signaling pathway;GO:0010119|regulation of stomatal movement;GO:0009414|response to water deprivation;GO:0004722|protein serine/threonine phosphatase activity;GO:0009738|abscisic acid mediated signaling pathway;GO:0009409|response to cold | GhM_A05G4168.1,GhM_D04G0758.1,GhM_A10G2825.1,GhM_D10G2789.1,GhM_A13G0232.1,GhM_D13G0217.1,GhM_D10G1824.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G13960||AT2G03340 | WRKY4; WRKY4; DNA binding / transcription factor||WRKY3; WRKY3; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009507|chloroplast;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G4406.1,GhM_D04G0537.1,GhM_A09G0144.1,GhM_D09G0144.1,GhM_A09G0163.1,GhM_A07G2667.1,GhM_D07G2568.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G63430 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4672.1,GhM_D04G0274.1,GhM_A07G2679.1,GhM_D07G2575.1,GhM_A10G2069.1,GhM_D11G1470.1,GhM_A11G1482.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G17650||AT1G48370||AT1G65730 | YSL8; YSL8 (YELLOW STRIPE LIKE 8); oligopeptide transporter||YSL7; YSL7 (YELLOW STRIPE LIKE 7); oligopeptide transporter||YSL5, PDE321; YSL5 (YELLOW STRIPE LIKE 5); oligopeptide transporter | GO:0005886|plasma membrane;GO:0015198|oligopeptide transporter activity;GO:0006857|oligopeptide transport | GhM_A05G4673.1,GhM_D04G0273.1,GhM_A08G2916.1,GhM_D08G2855.1,GhM_A08G2917.1,GhM_A13G0688.1,GhM_D13G0687.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G45140 | NRPC2; NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding | GO:0003899|DNA-directed RNA polymerase activity;GO:0003677|DNA binding;GO:0032549|ribonucleoside binding;GO:0006350|transcription;GO:0005575|cellular_component | GhM_A05G4750.1,GhM_D04G0199.1,GhM_A11G0053.1,GhM_D11G0055.1,GhM_A11G0054.1,GhM_A11G0055.1,GhM_D11G0056.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A05G4939.1,GhM_D04G0006.1,GhM_A08G0012.1,GhM_D08G0006.1,GhM_D01G1913.1,GhM_D01G2012.1,GhM_D12G0003.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G19490 | recA family protein | GO:0006259|DNA metabolic process;GO:0008094|DNA-dependent ATPase activity;GO:0000166|nucleotide binding;GO:0006281|DNA repair;GO:0003677|DNA binding;GO:0009432|SOS response;GO:0006310|DNA recombination;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A06G0871.1,GhM_D06G0875.1,GhM_A09G1299.1,GhM_A11G1597.1,GhM_A12G0409.1,GhM_A13G2548.1,GhM_D13G2461.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G19210 | AP2 domain-containing transcription factor, putative | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A06G0941.1,GhM_D06G0952.1,GhM_A08G3160.1,GhM_D08G3085.1,GhM_A10G0004.1,GhM_D07G0192.1,GhM_A07G0192.1 | 7 | 0 | Gossypium | Cotton | |||
| - | ATCG00530 | YCF10; hypothetical protein | GO:0012505|endomembrane system;GO:0016021|integral to membrane | GhM_A06G1132.1,GhM_A09G0557.1,GhM_Scaf146G296.1,GhM_D07G1101.1,GhM_Scaf187G314.1,GhM_Scaf264G376.1,GhM_Scaf270G381.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G50420 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G1876.1,GhM_D06G1871.1,GhM_A09G1037.1,GhM_D09G0971.1,GhM_A09G1036.1,GhM_D10G0526.1,GhM_A10G0551.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G14290||AT1G53860 | remorin family protein||PAE2; PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0022626|cytosolic ribosome;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005839|proteasome core complex;GO:0005575|cellular_component | GhM_A06G1888.1,GhM_D06G1874.1,GhM_A09G1032.1,GhM_D09G0967.1,GhM_A10G0560.1,GhM_D10G0535.1,GhM_A10G0561.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G25690 | CHUP1; CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) | GO:0009902|chloroplast relocation;GO:0009507|chloroplast;GO:0009707|chloroplast outer membrane | GhM_A07G0490.1,GhM_D07G0485.1,GhM_A07G0491.1,GhM_D03G0544.1,GhM_A09G1942.1,GhM_A11G0371.1,GhM_A13G0809.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G20090 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005739|mitochondrion | GhM_A07G0644.1,GhM_D07G0637.1,GhM_A09G3001.1,GhM_D09G2856.1,GhM_A11G0753.1,GhM_D11G0765.1,GhM_D13G2243.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G17840 | RLK902; RLK902; ATP binding / kinase/ protein serine/threonine kinase | GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A07G0871.1,GhM_D07G0873.1,GhM_A07G2160.1,GhM_A07G2261.1,GhM_D07G2190.1,GhM_A11G1949.1,GhM_D11G1938.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G02420 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A07G0876.1,GhM_A07G2257.1,GhM_D07G2187.1,GhM_A08G0474.1,GhM_D08G0458.1,GhM_A13G1175.1,GhM_D07G0879.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G22270||AT4G14990 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G0987.1,GhM_D07G0977.1,GhM_A07G2348.1,GhM_D07G2279.1,GhM_A11G1833.1,GhM_D11G1826.1,GhM_D07G0976.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G04550 | IBR5; IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5); MAP kinase phosphatase/ protein tyrosine/serine/threonine phosphatase | GO:0008138|protein tyrosine/serine/threonine phosphatase activity;GO:0033549|MAP kinase phosphatase activity;GO:0043407|negative regulation of MAP kinase activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0009733|response to auxin stimulus | GhM_A07G1034.1,GhM_D07G1026.1,GhM_A07G2428.1,GhM_D07G2338.1,GhM_A11G1784.1,GhM_D11G1770.1,GhM_A11G1159.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G04280||AT4G12700 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A07G1065.1,GhM_D07G1048.1,GhM_A07G1066.1,GhM_D07G2002.1,GhM_A07G2064.1,GhM_A07G2493.1,GhM_D07G2395.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G24430 | transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_A07G1175.1,GhM_D07G1160.1,GhM_A12G1918.1,GhM_A10G2201.1,GhM_D10G2132.1,GhM_A10G2202.1,GhM_D12G1844.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G61830||AT4G23980 | ARF9; ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor||ARF18; ARF18 (AUXIN RESPONSE FACTOR 18); transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009725|response to hormone stimulus | GhM_A07G1669.1,GhM_D07G1636.1,GhM_A11G1135.1,GhM_D11G1150.1,GhM_A12G1491.1,GhM_D12G1429.1,GhM_D11G1151.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G46020 | CHR2, ATBRM, BRM, CHA2; transcription regulatory protein SNF2, putative | GO:0030528|transcription regulator activity;GO:0010199|organ boundary specification between lateral organs and the meristem;GO:0040029|regulation of gene expression, epigenetic;GO:0005634|nucleus;GO:0043044|ATP-dependent chromatin remodeling;GO:0003677|DNA binding;GO:0005829|cytosol;GO:0004386|helicase activity;GO:0005524|ATP binding;GO:0016585|chromatin remodeling complex | GhM_A07G1737.1,GhM_A11G1045.1,GhM_D11G1058.1,GhM_A12G1439.1,GhM_D12G1375.1,GhM_D07G1707.1,GhM_D07G1708.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G45690 | SSE1, SSE, PEX16, ATPEX16; SSE1 (SHRUNKEN SEED 1) | GO:0005777|peroxisome;GO:0005789|endoplasmic reticulum membrane;GO:0006633|fatty acid biosynthetic process;GO:0003674|molecular_function;GO:0007031|peroxisome organization | GhM_A07G1777.1,GhM_D07G1739.1,GhM_A11G0971.1,GhM_D11G0982.1,GhM_A11G0970.1,GhM_A12G0647.1,GhM_A12G1827.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G54790||AT3G23280 | zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein||armadillo/beta-catenin repeat family protein / U-box domain-containing protein | GO:0005515|protein binding;GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0006499|N-terminal protein myristoylation;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0008270|zinc ion binding | GhM_A07G1839.1,GhM_D07G1798.1,GhM_A07G2744.1,GhM_D07G2643.1,GhM_A11G1542.1,GhM_D11G1535.1,GhM_D11G1534.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G04080 | PRP39; PRP39; binding | GO:0005488|binding;GO:0005622|intracellular | GhM_A07G1878.1,GhM_D07G1833.1,GhM_A07G1879.1,GhM_D11G1563.1,GhM_A07G2636.1,GhM_D07G2535.1,GhM_A11G1569.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G39820 | binding | GO:0005488|binding | GhM_A07G2434.1,GhM_D06G1640.1,GhM_A11G2511.1,GhM_D08G1683.1,GhM_D02G1708.1,GhM_D05G2964.1,GhM_D02G1814.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G48370||AT2G30720 | thioesterase family protein | GO:0008150|biological_process;GO:0005777|peroxisome;GO:0016788|hydrolase activity, acting on ester bonds;GO:0016291|acyl-CoA thioesterase activity;GO:0005575|cellular_component | GhM_A07G2523.1,GhM_D07G2425.1,GhM_A10G1821.1,GhM_D10G1311.1,GhM_A11G1699.1,GhM_D11G1686.1,GhM_A11G1698.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G11390 | ABC1 family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0292.1,GhM_D08G0282.1,GhM_A08G0293.1,GhM_D10G0224.1,GhM_A09G0977.1,GhM_D09G0912.1,GhM_A10G0239.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G62020 | GLP10; GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0030145|manganese ion binding;GO:0045735|nutrient reservoir activity;GO:0005618|cell wall | GhM_A08G0448.1,GhM_D08G0433.1,GhM_A08G1665.1,GhM_D08G1621.1,GhM_A12G1553.1,GhM_D12G1504.1,GhM_D11G1244.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G23410 | ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) | GO:0005886|plasma membrane;GO:0006464|protein modification process;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A08G0501.1,GhM_D07G1555.1,GhM_A10G0503.1,GhM_A12G1589.1,GhM_D08G0481.1,GhM_D10G0482.1,GhM_D11G1251.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G06000||AT3G63130||AT5G19320 | RANGAP1; RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator/ protein binding||leucine-rich repeat family protein||RANGAP2; RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2); RAN GTPase activator | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005098|RAN GTPase activator activity;GO:0009507|chloroplast;GO:0000910|cytokinesis;GO:0006606|protein import into nucleus;GO:0006913|nucleocytoplasmic transport;GO:0032153|cell division site;GO:0009651|response to salt stress;GO:0009504|cell plate;GO:0000072|M phase specific microtubule process;GO:0005886|plasma membrane;GO:0005635|nuclear envelope;GO:0005575|cellular_component;GO:0005783|endoplasmic reticulum | GhM_A08G0578.1,GhM_D08G0549.1,GhM_A08G0579.1,GhM_A08G0847.1,GhM_D08G0802.1,GhM_A10G1429.1,GhM_D10G1691.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G44640 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plasma membrane, plastid, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PDE320 (PIGMENT DEFECTIVE 320) (TAIR:AT3G06960.1); Has 25 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0005886|plasma membrane | GhM_A08G0715.1,GhM_A12G1322.1,GhM_A08G0716.1,GhM_D12G1258.1,GhM_D08G0684.1,GhM_D08G0683.1,GhM_D08G0682.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G63110 | ATIPT3, IPT3; ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3); ATP binding / tRNA isopentenyltransferase/ transferase, transferring alkyl or aryl (other than methyl) groups | GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0009691|cytokinin biosynthetic process;GO:0005634|nucleus;GO:0009536|plastid;GO:0004811|tRNA isopentenyltransferase activity;GO:0005524|ATP binding | GhM_A08G0872.1,GhM_D08G0827.1,GhM_A11G1427.1,GhM_D11G1417.1,GhM_D11G1539.1,GhM_A11G1546.1,GhM_D11G1540.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G47900 | AtTLP3; AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor | GO:0008081|phosphoric diester hydrolase activity;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A08G0907.1,GhM_D08G0865.1,GhM_A11G1385.1,GhM_A09G0876.1,GhM_A10G1186.1,GhM_D10G1945.1,GhM_D11G1375.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G62900 | zinc ion binding | GO:0008150|biological_process;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A08G0924.1,GhM_D08G0881.1,GhM_A08G0925.1,GhM_A11G1372.1,GhM_D11G1365.1,GhM_A12G0096.1,GhM_D12G0106.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A08G1071.1,GhM_A13G1497.1,GhM_A09G0415.1,GhM_A10G2487.1,GhM_A12G0723.1,GhM_A13G1723.1,GhM_D12G2897.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G27680||AT5G53540 | MSP1 protein, putative / intramitochondrial sorting protein, putative | GO:0012505|endomembrane system;GO:0016887|ATPase activity;GO:0004252|serine-type endopeptidase activity;GO:0000166|nucleotide binding;GO:0006508|proteolysis;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A08G1351.1,GhM_D08G1310.1,GhM_A09G2258.1,GhM_D09G2165.1,GhM_A12G2959.1,GhM_D12G2846.1,GhM_A12G2960.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G23895||AT4G11010 | pleckstrin homology (PH) domain-containing protein-related||NDPK3; NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3); ATP binding / nucleoside diphosphate kinase | GO:0008150|biological_process;GO:0006979|response to oxidative stress;GO:0003674|molecular_function;GO:0009536|plastid;GO:0005524|ATP binding;GO:0005739|mitochondrion;GO:0004550|nucleoside diphosphate kinase activity;GO:0005575|cellular_component;GO:0008270|zinc ion binding;GO:0005743|mitochondrial inner membrane;GO:0050897|cobalt ion binding | GhM_A08G1449.1,GhM_D08G1432.1,GhM_A08G1450.1,GhM_D12G2815.1,GhM_A09G2311.1,GhM_A12G2927.1,GhM_D09G2210.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G32900 | starch synthase, putative | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0009058|biosynthetic process;GO:0009250|glucan biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A08G1469.1,GhM_D08G1388.1,GhM_A08G1470.1,GhM_A09G2278.1,GhM_D09G2183.1,GhM_A12G2979.1,GhM_D12G2866.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G05610||AT2G26450||AT1G02810 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A08G1652.1,GhM_D08G1608.1,GhM_D11G1030.1,GhM_A09G0741.1,GhM_A09G0742.1,GhM_A12G1600.1,GhM_D12G1547.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G46080||AT1G01550 | BPS1; BPS1 (BYPASS 1)||INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: BPS1 (BYPASS 1) (TAIR:AT1G01550.2); Has 94 Blast hits to 83 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A08G1795.1,GhM_D11G1072.1,GhM_A11G1061.1,GhM_D12G1356.1,GhM_A12G1426.1,GhM_D08G1748.1,GhM_D08G1747.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G01510||AT1G01500 | unknown protein||AN; AN (ANGUSTIFOLIA); protein binding | GO:0008150|biological_process;GO:0009965|leaf morphogenesis;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0000226|microtubule cytoskeleton organization;GO:0042814|monopolar cell growth;GO:0005575|cellular_component | GhM_A08G1798.1,GhM_D08G1751.1,GhM_A11G1067.1,GhM_D11G1081.1,GhM_A08G1799.1,GhM_D08G1752.1,GhM_A11G1068.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G47470 | nodulin MtN21 family protein | GO:0016020|membrane | GhM_A08G2217.1,GhM_D08G2169.1,GhM_A08G2218.1,GhM_A09G2387.1,GhM_D09G2275.1,GhM_A12G2717.1,GhM_D12G2603.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G63650||AT5G41315 | GL3, MYC6.2; GL3 (GLABROUS 3); protein binding / transcription factor||EGL3, EGL1, ATMYC-2; EGL3 (ENHANCER OF GLABRA 3); DNA binding / transcription factor | GO:0005515|protein binding;GO:0001708|cell fate specification;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009957|epidermal cell fate specification;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010091|trichome branching | GhM_A08G2384.1,GhM_D08G2327.1,GhM_A08G2385.1,GhM_A11G0248.1,GhM_D11G0243.1,GhM_A11G1029.1,GhM_D11G1039.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G04030||AT5G18240 | myb family transcription factor||MYR1, ATMYR1; MYR1 (MYb-related protein 1); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A08G2740.1,GhM_D08G2683.1,GhM_D13G1344.1,GhM_A11G3236.1,GhM_D11G3158.1,GhM_A13G1449.1,GhM_D13G1345.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G35980 | YAK1; protein kinase family protein | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A08G2841.1,GhM_A11G2749.1,GhM_D11G2721.1,GhM_A13G2125.1,GhM_D13G2014.1,GhM_D08G2786.1,GhM_A08G2842.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A09G0138.1,GhM_A09G1338.1,GhM_D01G1231.1,GhM_A13G0356.1,GhM_A13G1130.1,GhM_D04G1146.1,GhM_D08G1676.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G51670||AT5G04550 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A09G0635.1,GhM_D09G0588.1,GhM_A11G0090.1,GhM_D11G0094.1,GhM_D12G3114.1,GhM_A12G3228.1,GhM_D12G3115.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A09G0820.1,GhM_A12G2881.1,GhM_D09G0583.1,GhM_D03G1588.1,GhM_D05G3861.1,GhM_D04G1173.1,GhM_D09G0793.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G16630||AT4G15885 | kinesin motor protein-related||ATKINESIN-13A, KINESIN-13A; KINESIN-13A; ATP binding / microtubule motor | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0010090|trichome morphogenesis;GO:0003777|microtubule motor activity;GO:0005795|Golgi stack;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A09G0885.1,GhM_D09G0821.1,GhM_A09G2903.1,GhM_D09G2766.1,GhM_A10G2064.1,GhM_D10G2000.1,GhM_A10G2065.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT2G41510||AT3G63440 | ATCKX1, CKX1; CKX1 (CYTOKININ OXIDASE/DEHYDROGENASE 1); cytokinin dehydrogenase||ATCKX6, CKX6, ATCKX7; CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6); cytokinin dehydrogenase | GO:0048507|meristem development;GO:0006499|N-terminal protein myristoylation;GO:0019139|cytokinin dehydrogenase activity;GO:0009823|cytokinin catabolic process;GO:0005773|vacuole;GO:0010103|stomatal complex morphogenesis | GhM_A09G1542.1,GhM_D09G1442.1,GhM_D13G0152.1,GhM_A10G3036.1,GhM_D10G2977.1,GhM_A13G0155.1,GhM_D04G0849.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G31400 | DNA-directed DNA polymerase/ damaged DNA binding | GO:0003887|DNA-directed DNA polymerase activity;GO:0003684|damaged DNA binding;GO:0006281|DNA repair | GhM_A09G1695.1,GhM_D09G1598.1,GhM_A09G1696.1,GhM_D01G1470.1,GhM_D04G1335.1,GhM_D03G0840.1,GhM_D05G3989.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT4G11740||AT4G23040 | SAY1; SAY1||UBX domain-containing protein | GO:0008150|biological_process;GO:0016192|vesicle-mediated transport;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005829|cytosol | GhM_A09G2340.1,GhM_D09G2240.1,GhM_A12G2807.1,GhM_D12G2695.1,GhM_D01G1923.1,GhM_D02G1209.1,GhM_D06G1175.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G07340||AT5G50915 | basic helix-loop-helix (bHLH) family protein | GO:0009507|chloroplast;GO:0009739|response to gibberellin stimulus;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A09G2522.1,GhM_D09G2404.1,GhM_A09G2523.1,GhM_A11G0472.1,GhM_D11G0454.1,GhM_A12G2453.1,GhM_D12G2339.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G45688||AT2G23420 | unknown protein||NAPRT2; NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2); nicotinate phosphoribosyltransferase | GO:0008150|biological_process;GO:0004516|nicotinate phosphoribosyltransferase activity;GO:0003674|molecular_function;GO:0019358|nicotinate nucleotide salvage;GO:0005886|plasma membrane;GO:0019363|pyridine nucleotide biosynthetic process;GO:0005575|cellular_component | GhM_A11G2260.1,GhM_D11G2228.1,GhM_A12G0854.1,GhM_A11G2266.1,GhM_D11G2233.1,GhM_D12G1086.1,GhM_D12G1087.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT1G08680 | ZIGA4, AGD14; ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4); ARF GTPase activator/ DNA binding / zinc ion binding | GO:0032312|regulation of ARF GTPase activity;GO:0008060|ARF GTPase activator activity;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005886|plasma membrane;GO:0008270|zinc ion binding | GhM_A11G2791.1,GhM_D11G2764.1,GhM_A11G2792.1,GhM_A11G2793.1,GhM_A11G2794.1,GhM_D11G3717.1,GhM_A11G3799.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT3G05670 | PHD finger family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A11G3397.1,GhM_D11G3309.1,GhM_A13G1516.1,GhM_D13G1399.1,GhM_A13G1515.1,GhM_A13G2340.1,GhM_D13G2231.1 | 7 | 0 | Gossypium | Cotton | |||
| - | AT5G27410||AT3G05190 | aminotransferase class IV family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0003824|catalytic activity | GhM_A12G3368.1,GhM_D03G0992.1,GhM_A13G1469.1,GhM_D13G1357.1,GhM_A13G1468.1,GhM_D05G2007.1,GhM_D07G1235.1 | 7 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D02G1582.1,GhM_D11G1523.1,GhM_D02G2512.1,GhM_D06G0750.1,GhM_D11G2948.1,GhM_D06G1211.1,GhM_D10G1926.1 | 7 | 0 | Gossypium | Cotton | |||
| TA1033:GhM_A05G2992.1,GhM_A05G2993.1,GhM_A05G2994.1 | AT1G78260||AT1G22330 | RNA recognition motif (RRM)-containing protein||RNA binding / nucleic acid binding / nucleotide binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A05G2532.1,GhM_D05G2999.1,GhM_D05G2540.1,GhM_A06G0397.1 | 7 | 1 | Gossypium | Cotton | |||
| TA116:GhM_A01G2215.1,GhM_A01G2216.1,GhM_A01G2219.1,GhM_A01G2220.1,GhM_A01G2222.1,GhM_A01G2225.1,GhM_A01G2226.1 | AT1G25290 | ATRBL10; ATRBL10 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 10) | GO:0008150|biological_process;GO:0016021|integral to membrane;GO:0003674|molecular_function | - | 7 | 1 | Gossypium | Cotton | |||
| TA1191:GhM_A10G2164.1,GhM_A10G2170.1 | AT5G58040 | ATFIP1[V]; ATFIP1[V] (Arabidopsis homolog of yeast Fip1 [V]); RNA binding / protein binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_D10G2097.1,GhM_D10G2096.1,GhM_A10G2165.1,GhM_A10G2166.1,GhM_D10G2098.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1245:GhM_A11G1017.1,GhM_A11G1020.1 | AT5G27870||AT4G33230||AT3G05610||AT2G47030 | pectinesterase family protein||VGDH1; VGDH1; enzyme inhibitor/ pectinesterase | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A03G2686.1,GhM_D02G2706.1,GhM_A13G2466.1,GhM_D13G2359.1,GhM_D11G1031.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1248:GhM_A11G1104.1,GhM_A11G1105.1 | AT2G46370 | JAR1, FIN219; JAR1 (JASMONATE RESISTANT 1); ATP binding / adenylyltransferase/ catalytic/ jasmonate-amino synthetase | GO:0009585|red, far-red light phototransduction;GO:0009640|photomorphogenesis;GO:0009694|jasmonic acid metabolic process;GO:0003824|catalytic activity;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0018117|protein amino acid adenylylation;GO:0009861|jasmonic acid and ethylene-dependent systemic resistance;GO:0009733|response to auxin stimulus;GO:0009611|response to wounding;GO:0009627|systemic acquired resistance;GO:0005737|cytoplasm;GO:0010193|response to ozone;GO:0009753|response to jasmonic acid stimulus;GO:0010119|regulation of stomatal movement;GO:0031348|negative regulation of defense response;GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway;GO:0005524|ATP binding;GO:0005773|vacuole | GhM_A07G1699.1,GhM_A08G1720.1,GhM_D07G1667.1,GhM_D08G1671.1,GhM_D11G1118.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1343:GhM_A11G4024.1,GhM_A11G4025.1 | AT1G68560 | ATXYL1, XYL1; XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0046556|alpha-N-arabinofuranosidase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0005618|cell wall;GO:0045493|xylan catabolic process;GO:0009044|xylan 1,4-beta-xylosidase activity | GhM_D11G3913.1,GhM_D12G2057.1,GhM_A12G2150.1,GhM_D13G0743.1,GhM_D06G2451.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1463:GhM_A13G0333.1,GhM_A13G0335.1 | AT4G38970||AT2G01140 | fructose-bisphosphate aldolase, putative | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0006979|response to oxidative stress;GO:0003824|catalytic activity;GO:0009737|response to abscisic acid stimulus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0010287|plastoglobule;GO:0006098|pentose-phosphate shunt;GO:0004332|fructose-bisphosphate aldolase activity;GO:0016020|membrane | GhM_A05G3855.1,GhM_A12G0694.1,GhM_D13G0320.1,GhM_D12G0689.1,GhM_D05G3693.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1479:GhM_A13G0864.1,GhM_A13G0865.1 | AT5G02290||AT2G02800||AT2G28930 | NAK; NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||APK1B; APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||APK2B; APK2B (PROTEIN KINASE 2B); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005634|nucleus;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D13G0805.1,GhM_A12G2134.1,GhM_D13G0804.1,GhM_D12G2042.1,GhM_D04G1541.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1893:GhM_D05G0860.1,GhM_D05G0862.1 | AT2G27150||AT3G43600||AT5G20960||AT1G04580 | AAO1, AO1, ATAO, ATAO1; AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1); aldehyde oxidase/ indole-3-acetaldehyde oxidase||AAO3; AAO3 (Abscisic ALDEHYDE OXIDASE 3); abscisic aldehyde oxidase/ aldehyde oxidase/ indole-3-acetaldehyde oxidase||AAO2; AAO2 (ALDEHYDE OXIDASE 2); aldehyde oxidase||AAO4, ATAO-4, ATAO2; AAO4 (ARABIDOPSIS ALDEHYDE OXIDASE 4); aldehyde oxidase/ aryl-aldehyde oxidase | GO:0009688|abscisic acid biosynthetic process;GO:0010293|abscisic aldehyde oxidase activity;GO:0009851|auxin biosynthetic process;GO:0018488|aryl-aldehyde oxidase activity;GO:0019760|glucosinolate metabolic process;GO:0050302|indole-3-acetaldehyde oxidase activity;GO:0005829|cytosol;GO:0004031|aldehyde oxidase activity;GO:0018479|benzaldehyde dehydrogenase (NAD+) activity;GO:0005575|cellular_component | GhM_A05G0841.1,GhM_A07G1387.1,GhM_A09G1345.1,GhM_A09G1346.1,GhM_D09G1263.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2153:GhM_A01G1542.1,GhM_A01G1545.1 | AT2G41900 | zinc finger (CCCH-type) family protein | GO:0003700|transcription factor activity;GO:0003676|nucleic acid binding;GO:0045449|regulation of transcription | GhM_D01G1504.1,GhM_A09G1574.1,GhM_D09G1471.1,GhM_D03G0848.1,GhM_A02G1320.1 | 7 | 1 | Gossypium | Cotton | |||
| TA219:GhM_A13G2833.1,GhM_A13G2834.1,GhM_A13G2835.1,GhM_A13G2836.1,GhM_A13G2837.1 | AT2G26740||AT3G05600 | epoxide hydrolase, putative||ATSEH; ATSEH (Arabidopsis thaliana soluble epoxide hydrolase); epoxide hydrolase | GO:0009733|response to auxin stimulus;GO:0003824|catalytic activity;GO:0004301|epoxide hydrolase activity;GO:0009414|response to water deprivation | GhM_A13G2826.1,GhM_D13G2717.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2201:GhM_D07G0057.1,GhM_D07G0058.1 | AT3G24503 | ALDH2C4, ALDH1A, REF1; ALDH2C4; 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD)/ coniferyl-aldehyde dehydrogenase | GO:0004029|aldehyde dehydrogenase (NAD) activity;GO:0004028|3-chloroallyl aldehyde dehydrogenase activity;GO:0009699|phenylpropanoid biosynthetic process;GO:0050269|coniferyl-aldehyde dehydrogenase activity | GhM_A07G0085.1,GhM_D05G0250.1,GhM_A05G0243.1,GhM_A06G0722.1,GhM_D06G0726.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2202:GhM_D07G0094.1,GhM_D07G0096.1 | AT2G20010 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Munc13 homology 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25800.1); Has 93 Blast hits to 88 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0275.1,GhM_A06G0783.1,GhM_A07G0093.1,GhM_D05G0285.1,GhM_D06G0784.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2212:GhM_D07G0639.1,GhM_D07G0640.1 | AT5G63380 | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | GO:0009695|jasmonic acid biosynthetic process;GO:0005777|peroxisome;GO:0016207|4-coumarate-CoA ligase activity;GO:0004321|fatty-acyl-CoA synthase activity | GhM_A07G0646.1,GhM_A11G0449.1,GhM_D11G0430.1,GhM_A09G2998.1,GhM_D13G2247.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2341:GhM_D08G2400.1,GhM_D08G2401.1 | AT2G30590 | WRKY21; WRKY21; calmodulin binding / transcription factor | GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0005516|calmodulin binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity | GhM_A08G2450.1,GhM_D07G2597.1,GhM_D11G1490.1,GhM_A07G2700.1,GhM_A11G1502.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2499:GhM_D10G2187.1,GhM_D10G2188.1 | AT3G56380 | ARR17, RR17; ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17); transcription regulator/ two-component response regulator | GO:0030528|transcription regulator activity;GO:0005575|cellular_component;GO:0000156|two-component response regulator activity;GO:0009736|cytokinin mediated signaling pathway | GhM_A05G3141.1,GhM_A10G2266.1,GhM_A10G2278.1,GhM_D05G3142.1,GhM_D10G2202.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2554:GhM_D11G0612.1,GhM_D11G0624.1 | AT5G65420||AT2G22490 | CYCD2;1, ATCYCD2;1; CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding||CYCD4;1; CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | GO:0051726|regulation of cell cycle;GO:0005515|protein binding;GO:0009744|response to sucrose stimulus;GO:0005634|nucleus;GO:0010440|stomatal lineage progression;GO:0016538|cyclin-dependent protein kinase regulator activity;GO:0000080|G1 phase of mitotic cell cycle | GhM_A11G0615.1,GhM_A11G2432.1,GhM_A12G1179.1,GhM_D12G0945.1,GhM_D11G2455.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2644:GhM_D11G3437.1,GhM_D11G3439.1 | AT2G45670 | calcineurin B subunit-related | GO:0008152|metabolic process;GO:0008415|acyltransferase activity;GO:0005509|calcium ion binding | GhM_A11G0965.1,GhM_A12G1366.1,GhM_D11G0979.1,GhM_D11G3408.1,GhM_D12G1305.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2782:GhM_D13G0528.1,GhM_D13G0529.1 | AT5G64420 | DNA polymerase V family | GO:0006260|DNA replication;GO:0003677|DNA binding;GO:0006350|transcription;GO:0003887|DNA-directed DNA polymerase activity;GO:0005575|cellular_component | GhM_A13G0544.1,GhM_Scaf001G049.1,GhM_Scaf001G048.1,GhM_Scaf001G047.1,GhM_Scaf001G046.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2847:GhM_D13G2417.1,GhM_D13G2423.1 | AT2G05830 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein | GO:0012505|endomembrane system | GhM_A07G0178.1,GhM_A13G2512.1,GhM_D07G0178.1,GhM_A07G0179.1,GhM_D07G0179.1 | 7 | 1 | Gossypium | Cotton | |||
| TA286:GhM_A02G0211.1,GhM_A02G0212.1,GhM_A02G0213.1,GhM_A02G0214.1,GhM_A02G0218.1 | AT4G14040||AT4G14030 | SBP1; SBP1 (selenium-binding protein 1); selenium binding||EDA38, SBP2; SBP2 (SELENIUM-BINDING PROTEIN 2); selenium binding | GO:0042542|response to hydrogen peroxide;GO:0008430|selenium binding;GO:0046686|response to cadmium ion;GO:0010197|polar nucleus fusion;GO:0000103|sulfate assimilation;GO:0005575|cellular_component | GhM_D10G1528.1,GhM_A10G1581.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2877:GhM_A02G0161.1,GhM_A02G0162.1 | AT5G12480||AT5G19450 | CPK7; CPK7 (calmodulin-domain protein kinase 7); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||CDPK19, CPK8; CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0004683|calmodulin-dependent protein kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D02G0166.1,GhM_A10G1667.1,GhM_A05G3737.1,GhM_D05G3791.1,GhM_D10G1452.1 | 7 | 1 | Gossypium | Cotton | |||
| TA290:GhM_A05G3193.1,GhM_A05G3195.1,GhM_A05G3196.1,GhM_A05G3197.1,GhM_A05G3198.1 | - | - | - | GhM_D05G3887.1,GhM_D05G3193.1 | 7 | 1 | Gossypium | Cotton | |||
| TA2941:GhM_A02G1926.1,GhM_A02G1933.1 | AT5G47360 | pentatricopeptide (PPR) repeat-containing protein | - | GhM_D03G0335.1,GhM_D11G0298.1,GhM_A11G0313.1,GhM_D02G1767.1,GhM_A03G1694.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3000:GhM_A03G1245.1,GhM_A03G1246.1 | AT4G31330 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D02G1455.1,GhM_A06G1484.1,GhM_D06G1344.1,GhM_A13G2391.1,GhM_D13G2290.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3073:GhM_A04G0848.1,GhM_A04G0853.1 | AT2G36460||AT3G52930||AT4G26530 | fructose-bisphosphate aldolase, putative | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0005740|mitochondrial envelope;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005730|nucleolus;GO:0005829|cytosol;GO:0006098|pentose-phosphate shunt;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G2595.1,GhM_D04G1308.1,GhM_D01G2525.1,GhM_D13G1645.1,GhM_A13G1768.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3209:GhM_A05G3563.1,GhM_A05G3564.1 | ATCG00490||ATCG00500 | ACCD; Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis.||RBCL; large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | GO:0022626|cytosolic ribosome;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005618|cell wall;GO:0016020|membrane | GhM_A01G1652.1,GhM_Scaf185G310.1,GhM_Scaf187G315.1,GhM_A13G1395.1,GhM_A07G2072.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3236:GhM_A05G4457.1,GhM_A05G4460.1 | AT4G16310 | LDL3; LDL3 (LSD1-LIKE3); amine oxidase/ electron carrier/ oxidoreductase | GO:0016491|oxidoreductase activity;GO:0008131|amine oxidase activity;GO:0009055|electron carrier activity | GhM_A03G1066.1,GhM_D04G0486.1,GhM_D02G1086.1,GhM_Scaf001G005.1,GhM_D05G2124.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3241:GhM_A05G4482.1,GhM_A05G4484.1 | AT2G30390||AT5G26030 | FC2, FC-II, ATFC-II; FC2 (FERROCHELATASE 2); ferrochelatase||FC1, FC-I, ATFC-I; FC1 (ferrochelatase 1); ferrochelatase | GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0009536|plastid;GO:0033014|tetrapyrrole biosynthetic process;GO:0005739|mitochondrion;GO:0004325|ferrochelatase activity;GO:0006783|heme biosynthetic process | GhM_D04G0467.1,GhM_D11G2700.1,GhM_A11G2702.1,GhM_A08G3183.1,GhM_D08G3110.1 | 7 | 1 | Gossypium | Cotton | |||
| TA324:GhM_A10G3012.1,GhM_A10G3013.1,GhM_A10G3016.1,GhM_A10G3017.1 | AT2G40410||AT3G56170 | CAN; CAN (CA-2+ DEPENDENT NUCLEASE); nuclease||Ca(2+)-dependent nuclease, putative | GO:0016788|hydrolase activity, acting on ester bonds;GO:0003676|nucleic acid binding;GO:0004518|nuclease activity;GO:0006499|N-terminal protein myristoylation | GhM_A06G2106.1,GhM_A10G3014.1,GhM_D06G2085.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3281:GhM_A06G0562.1,GhM_A06G0564.1 | - | - | - | GhM_A08G2813.1,GhM_A09G1191.1,GhM_A13G2086.1,GhM_D02G0850.1,GhM_D10G1502.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3286:GhM_A06G0663.1,GhM_A06G0665.1 | AT2G26690 | nitrate transporter (NTP2) | GO:0009753|response to jasmonic acid stimulus;GO:0016020|membrane;GO:0005215|transporter activity;GO:0009611|response to wounding | GhM_D06G0671.1,GhM_D07G0448.1,GhM_A07G0450.1,GhM_A13G2435.1,GhM_D13G2332.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3448:GhM_A08G0920.1,GhM_A08G0921.1 | AT1G03010 | phototropic-responsive NPH3 family protein | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0004871|signal transducer activity;GO:0009860|pollen tube growth | GhM_D08G0878.1,GhM_A12G0094.1,GhM_D12G0101.1,GhM_A11G1375.1,GhM_D11G1368.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3495:GhM_A08G3021.1,GhM_A08G3022.1 | AT4G31980||AT2G44450||AT2G25630 | unknown protein||BGLU15; BGLU15 (BETA GLUCOSIDASE 15); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU14; BGLU14 (BETA GLUCOSIDASE 14); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0008150|biological_process;GO:0009860|pollen tube growth;GO:0009505|plant-type cell wall;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0005618|cell wall;GO:0005575|cellular_component | GhM_D08G2954.1,GhM_D08G2999.1,GhM_A11G3743.1,GhM_D11G3665.1,GhM_A08G3069.1 | 7 | 1 | Gossypium | Cotton | |||
| TA3505:GhM_A09G0007.1,GhM_A09G0014.1 | AT3G19340 | LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: aminopeptidase (TAIR:AT5G13940.1); Has 143 Blast hits to 138 proteins in 46 species: Archae - 0; Bacteria - 59; Metazoa - 12; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | GO:0005886|plasma membrane | GhM_D09G0003.1,GhM_A09G0448.1,GhM_D09G0408.1,GhM_D10G0868.1,GhM_A10G0777.1 | 7 | 1 | Gossypium | Cotton | |||
| TA372:GhM_D03G0231.1,GhM_D03G0232.1,GhM_D03G0233.1,GhM_D03G0234.1 | - | - | - | GhM_A02G2030.1,GhM_A02G2035.1,GhM_A02G2032.1 | 7 | 1 | Gossypium | Cotton | |||
| TA481:GhM_A03G2119.1,GhM_A03G2123.1,GhM_A03G2124.1,GhM_A03G2125.1 | AT1G51990||AT4G35160 | O-methyltransferase family 2 protein | GO:0008168|methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0005829|cytosol;GO:0046983|protein dimerization activity | GhM_A03G2121.1,GhM_D02G2143.1,GhM_A11G3717.1 | 7 | 1 | Gossypium | Cotton | |||
| TA570:GhM_A11G0204.1,GhM_A11G0205.1,GhM_A11G0206.1 | AT5G42090 | LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09570.1); Has 303 Blast hits to 300 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 180; Fungi - 10; Plants - 90; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0016021|integral to membrane | GhM_A02G1208.1,GhM_A12G2971.1,GhM_D12G2858.1,GhM_D03G1022.1 | 7 | 1 | Gossypium | Cotton | |||
| TA611:GhM_A12G2362.1,GhM_A12G2363.1,GhM_A12G2365.1 | AT3G26210||AT2G30750||AT3G48270 | CYP71A26; CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A12; CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0009617|response to bacterium;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D12G2258.1,GhM_D12G2260.1,GhM_A12G2419.1,GhM_D12G2315.1 | 7 | 1 | Gossypium | Cotton | |||
| TA626:GhM_A13G0818.1,GhM_A13G0820.1,GhM_A13G0821.1 | AT4G10500||AT2G36690 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0009058|biosynthetic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0019748|secondary metabolic process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A13G0571.1,GhM_A13G0819.1,GhM_D13G0573.1,GhM_D13G0554.1 | 7 | 1 | Gossypium | Cotton | |||
| TA898:GhM_D11G3674.1,GhM_D11G3681.1,GhM_D11G3683.1 | AT3G03960 | chaperonin, putative | GO:0005515|protein binding;GO:0051082|unfolded protein binding;GO:0044267|cellular protein metabolic process;GO:0006457|protein folding;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A10G2016.1,GhM_A11G3249.1,GhM_A11G3752.1,GhM_D11G3170.1 | 7 | 1 | Gossypium | Cotton | |||
| TA1025:GhM_A05G2435.1,GhM_A05G2436.1,GhM_A05G2437.1;TA1936:GhM_D05G2447.1,GhM_D05G2448.1 | AT5G64410||AT1G09930 | ATOPT2; ATOPT2; oligopeptide transporter||ATOPT4, OPT4; OPT4 (OLIGOPEPTIDE TRANSPORTER 4); oligopeptide transporter | GO:0006857|oligopeptide transport;GO:0015198|oligopeptide transporter activity;GO:0016020|membrane;GO:0005886|plasma membrane | GhM_A03G2366.1,GhM_D02G2385.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1038:GhM_A05G3218.1,GhM_A05G3223.1,GhM_A05G3226.1;TA1960:GhM_D05G3211.1,GhM_D05G3212.1 | - | - | - | GhM_A04G0485.1,GhM_D05G3886.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1040:GhM_A05G3289.1,GhM_A05G3290.1,GhM_A05G3291.1;TA1962:GhM_D05G3274.1,GhM_D05G3275.1 | AT3G25810||AT4G16730||AT4G16740 | lyase/ magnesium ion binding||myrcene/ocimene synthase, putative||ATTPS03; ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase | GO:0005515|protein binding;GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0009536|plastid;GO:0009611|response to wounding;GO:0050552|(4S)-limonene synthase activity;GO:0010334|sesquiterpene synthase activity;GO:0034002|(R)-limonene synthase activity;GO:0016829|lyase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0043693|monoterpene biosynthetic process;GO:0050551|myrcene synthase activity;GO:0050550|pinene synthase activity | GhM_A05G3583.1,GhM_D05G3545.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1132:GhM_A10G0298.1,GhM_A10G0299.1;TA2448:GhM_D10G0282.1,GhM_D10G0284.1 | AT1G28360||AT3G15210||AT5G44210 | ERF9, ATERF9, ATERF-9; ERF9 (ERF DOMAIN PROTEIN 9); DNA binding / transcription factor/ transcription repressor||ATERF-4, ERF4, RAP2.5, ATERF4; ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor||ERF12, ATERF12; ERF12 (ERF DOMAIN PROTEIN 12); DNA binding / transcription factor/ transcription repressor | GO:0005515|protein binding;GO:0009873|ethylene mediated signaling pathway;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016604|nuclear body;GO:0016564|transcription repressor activity;GO:0009723|response to ethylene stimulus;GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway;GO:0016020|membrane | GhM_A06G1576.1,GhM_A09G1007.1,GhM_D09G0941.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1200:GhM_A10G2489.1,GhM_A10G2490.1;TA2508:GhM_D10G2404.1,GhM_D10G2406.1 | AT1G61730 | DNA-binding storekeeper protein-related | GO:0008150|biological_process;GO:0030528|transcription regulator activity;GO:0009507|chloroplast;GO:0005730|nucleolus;GO:0005829|cytosol | GhM_D01G0366.1,GhM_D13G0209.1,GhM_A01G0382.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1210:GhM_A10G2664.1,GhM_A10G2666.1;TA2517:GhM_D10G2580.1,GhM_D10G2581.1 | AT3G24020||AT1G07730||AT2G39430||AT4G13580||AT2G28670 | disease resistance-responsive family protein||disease resistance-responsive protein-related / dirigent protein-related||disease resistance-responsive family protein / fibroin-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0009807|lignan biosynthetic process;GO:0003674|molecular_function | GhM_D10G2579.1,GhM_A05G3413.1,GhM_A10G2665.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1283:GhM_A11G2627.1,GhM_A11G2630.1;TA2608:GhM_D11G2275.1,GhM_D11G2278.1 | AT1G16570 | glycosyl transferase family 1 protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009058|biosynthetic process;GO:0005739|mitochondrion | GhM_A09G0058.1,GhM_D11G2276.1,GhM_D11G2277.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1299:GhM_A11G3092.1,GhM_A11G3095.1;TA2625:GhM_D11G3026.1,GhM_D11G3027.1 | AT3G04470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G04780.1); Has 842 Blast hits to 642 proteins in 95 species: Archae - 0; Bacteria - 6; Metazoa - 523; Fungi - 26; Plants - 165; Viruses - 4; Other Eukaryotes - 118 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A13G2241.1,GhM_D13G2131.1,GhM_D13G2130.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1392:GhM_A12G1355.1,GhM_A12G1356.1;TA2711:GhM_D12G1293.1,GhM_D12G1296.1 | AT2G45410||AT2G45420||AT2G02380 | LBD18; LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)||ATGSTZ2; ATGSTZ2; catalytic/ glutathione transferase||LBD19; LBD19 (LOB DOMAIN-CONTAINING PROTEIN 19) | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0005634|nucleus;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm;GO:0010089|xylem development;GO:0005575|cellular_component | GhM_A12G1354.1,GhM_A08G1811.1,GhM_D08G1764.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1404:GhM_A12G1786.1,GhM_A12G1787.1;TA2726:GhM_D12G1731.1,GhM_D12G1732.1 | AT2G20870 | cell wall protein precursor, putative | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A09G1862.1,GhM_D01G2521.1,GhM_D06G1440.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1436:GhM_A12G2936.1,GhM_A12G2937.1;TA2749:GhM_D12G2824.1,GhM_D12G2825.1 | AT5G24270||AT1G64480 | CBL8; CBL8 (CALCINEURIN B-LIKE PROTEIN 8); calcium ion binding||SOS3, CBL4; SOS3 (SALT OVERLY SENSITIVE 3); calcium ion binding / calcium-dependent protein serine/threonine phosphatase | GO:0030007|cellular potassium ion homeostasis;GO:0004723|calcium-dependent protein serine/threonine phosphatase activity;GO:0005955|calcineurin complex;GO:0005509|calcium ion binding;GO:0042539|hypotonic salinity response;GO:0005513|detection of calcium ion;GO:0006499|N-terminal protein myristoylation;GO:0005737|cytoplasm;GO:0016020|membrane | GhM_D12G2823.1,GhM_A09G2306.1,GhM_D09G2205.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1455:GhM_A13G0095.1,GhM_A13G0097.1;TA2768:GhM_D13G0103.1,GhM_D13G0104.1 | AT3G56460 | oxidoreductase, zinc-binding dehydrogenase family protein | GO:0008152|metabolic process;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0016491|oxidoreductase activity | GhM_A05G3121.1,GhM_A13G0096.1,GhM_D05G3115.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1506:GhM_A13G1809.1,GhM_A13G1810.1;TA2812:GhM_D13G1316.1,GhM_D13G1317.1 | - | - | - | GhM_A13G1636.1,GhM_D13G1515.1,GhM_D08G1435.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1535:GhM_A13G2596.1,GhM_A13G2601.1;TA2852:GhM_D13G2501.1,GhM_D13G2502.1 | AT5G19980 | integral membrane family protein | GO:0015780|nucleotide-sugar transport;GO:0016020|membrane;GO:0005794|Golgi apparatus | GhM_A05G0218.1,GhM_A08G3087.1,GhM_D05G0223.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1544:GhM_D01G0009.1,GhM_D01G0010.1;TA3039:GhM_A04G0005.1,GhM_A04G0006.1 | AT4G21192 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase biogenesis protein Cmc1-like (InterPro:IPR013892); Has 111 Blast hits to 111 proteins in 53 species: Archae - 0; Bacteria - 0; Metazoa - 71; Fungi - 29; Plants - 9; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0026.1,GhM_A01G1698.1,GhM_D10G0008.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1588:GhM_D01G0974.1,GhM_D01G0975.1;TA2137:GhM_A01G1004.1,GhM_A01G1005.1 | AT3G44730 | kinesin motor protein-related | GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0005524|ATP binding;GO:0003777|microtubule motor activity | GhM_A04G0041.1,GhM_D05G4383.1,GhM_D05G4382.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1603:GhM_D01G1816.1,GhM_D01G1817.1;TA2161:GhM_A01G1799.1,GhM_A01G1800.1 | AT2G45220||AT1G23200||AT3G05610 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0016020|membrane | GhM_D02G1694.1,GhM_A03G1625.1,GhM_D12G2619.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1630:GhM_D02G0001.1,GhM_D02G0003.1;TA1688:GhM_D02G1300.1,GhM_D02G1303.1 | AT2G43080 | AT-P4H-1; AT-P4H-1 (A. THALIANA P4H ISOFORM 1); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen | GO:0012505|endomembrane system | GhM_A03G1278.1,GhM_A10G1693.1,GhM_D10G1431.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1643:GhM_D02G0205.1,GhM_D02G0206.1;TA2878:GhM_A02G0204.1,GhM_A02G0205.1 | AT1G27760 | SAT32, ATSAT32; interferon-related developmental regulator family protein / IFRD protein family | GO:0005488|binding;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0005737|cytoplasm | GhM_D10G1337.1,GhM_A10G2206.1,GhM_D07G0379.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1761:GhM_D03G1312.1,GhM_D03G1314.1;TA2985:GhM_A03G0784.1,GhM_A03G0785.1 | AT2G45220||AT3G47400 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0016020|membrane | GhM_D03G1313.1,GhM_A11G0923.1,GhM_D11G0939.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1763:GhM_D03G1394.1,GhM_D03G1398.1;TA2981:GhM_A03G0711.1,GhM_A03G0715.1 | AT5G50400||AT1G13750 | ATPAP27, PAP27; PAP27 (PURPLE ACID PHOSPHATASE 27); acid phosphatase/ protein serine/threonine phosphatase||calcineurin-like phosphoesterase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0003993|acid phosphatase activity;GO:0046872|metal ion binding;GO:0004722|protein serine/threonine phosphatase activity | GhM_D13G0943.1,GhM_D12G1982.1,GhM_D12G1983.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1819:GhM_D04G0990.1,GhM_D04G0991.1;TA3221:GhM_A05G4097.1,GhM_A05G4098.1 | AT3G07990||AT2G35770 | SCPL27; SCPL27 (serine carboxypeptidase-like 27); serine-type carboxypeptidase||scpl28; scpl28 (serine carboxypeptidase-like 28); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_D13G0259.1,GhM_A13G0274.1,GhM_D10G0630.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1894:GhM_D05G0914.1,GhM_D05G0915.1;TA3137:GhM_A05G0896.1,GhM_A05G0897.1 | AT2G27510||AT3G52750 | FTSZ2-2; FTSZ2-2; GTP binding / GTPase/ structural molecule||ATFD3; ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | GO:0009507|chloroplast;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0051536|iron-sulfur cluster binding;GO:0009570|chloroplast stroma;GO:0022900|electron transport chain;GO:0005198|structural molecule activity;GO:0051258|protein polymerization;GO:0051537|2 iron, 2 sulfur cluster binding;GO:0016020|membrane;GO:0009055|electron carrier activity | GhM_A08G0107.1,GhM_D13G2764.1,GhM_A13G2863.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1895:GhM_D05G0916.1,GhM_D05G0917.1;TA3138:GhM_A05G0898.1,GhM_A05G0900.1 | - | - | - | GhM_A02G1141.1,GhM_A01G1543.1,GhM_A08G0557.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1897:GhM_D05G1035.1,GhM_D05G1037.1;TA3142:GhM_A05G1020.1,GhM_A05G1021.1 | AT5G06060||AT2G29260||AT2G29170 | short-chain dehydrogenase/reductase (SDR) family protein / tropinone reductase, putative||tropinone reductase, putative / tropine dehydrogenase, putative | GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D05G1036.1,GhM_A05G4169.1,GhM_D04G0757.1 | 7 | 2 | Gossypium | Cotton | |||
| TA199:GhM_A10G2950.1,GhM_A10G2951.1,GhM_A10G2952.1,GhM_A10G2953.1,GhM_A10G2973.1;TA2532:GhM_D10G2923.1,GhM_D10G2924.1 | AT2G04840||AT2G04810||AT5G03390 | unknown protein||F-box family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA2013:GhM_D06G0229.1,GhM_D06G0230.1;TA3265:GhM_A06G0225.1,GhM_A06G0226.1 | AT4G34215||AT3G53010 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF303, acetylesterase putative (InterPro:IPR005181); BEST Arabidopsis thaliana protein match is: hydrolase (TAIR:AT4G34215.2); Has 199 Blast hits to 199 proteins in 58 species: Archae - 0; Bacteria - 119; Metazoa - 0; Fungi - 1; Plants - 56; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).||hydrolase | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0016787|hydrolase activity;GO:0003674|molecular_function;GO:0005575|cellular_component | GhM_A05G2317.1,GhM_A05G2943.1,GhM_D05G2333.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2063:GhM_D06G2077.1,GhM_D06G2078.1;TA3315:GhM_A06G2097.1,GhM_A06G2098.1 | AT3G56200||AT2G40520 | nucleotidyltransferase family protein||amino acid transporter family protein | GO:0008150|biological_process;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0016779|nucleotidyltransferase activity;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A05G3942.1,GhM_D04G0837.1,GhM_A13G2144.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2088:GhM_D06G2599.1,GhM_D06G2600.1;TA3343:GhM_A06G2608.1,GhM_A06G2609.1 | AT1G61690||AT4G05200||AT4G23220 | phosphoinositide binding||kinase||protein kinase family protein | GO:0012505|endomembrane system;GO:0035091|phosphoinositide binding;GO:0006468|protein amino acid phosphorylation;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0005575|cellular_component | GhM_A06G2607.1,GhM_D01G1894.1,GhM_D10G0182.1 | 7 | 2 | Gossypium | Cotton | |||
| TA213:GhM_A12G1924.1,GhM_A12G1925.1,GhM_A12G1926.1,GhM_A12G1927.1,GhM_A12G1928.1;TA2730:GhM_D12G1850.1,GhM_D12G1851.1 | - | - | - | - | 7 | 2 | Gossypium | Cotton | |||
| TA2218:GhM_D07G0744.1,GhM_D07G0745.1;TA3366:GhM_A07G0755.1,GhM_A07G0757.1 | AT5G40200 | DegP9; DegP9 (DegP protease 9); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0004252|serine-type endopeptidase activity;GO:0005730|nucleolus;GO:0008236|serine-type peptidase activity;GO:0006508|proteolysis | GhM_A07G0756.1,GhM_A11G0785.1,GhM_D11G0800.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2243:GhM_D07G1693.1,GhM_D07G1695.1;TA3383:GhM_A07G1724.1,GhM_A07G1725.1 | AT3G61490||AT4G23500 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity;GO:0005618|cell wall | GhM_A11G1060.1,GhM_D11G1071.1,GhM_D03G1797.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2276:GhM_D07G2604.1,GhM_D07G2605.1;TA3412:GhM_A07G2706.1,GhM_A07G2707.1 | AT5G63450 | CYP94B1; CYP94B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A07G2637.1,GhM_A08G2451.1,GhM_D08G2402.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2284:GhM_D07G2734.1,GhM_D07G2736.1;TA3417:GhM_A07G2825.1,GhM_A07G2830.1 | AT1G23740 | oxidoreductase, zinc-binding dehydrogenase family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009409|response to cold;GO:0003824|catalytic activity;GO:0005488|binding;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0008270|zinc ion binding;GO:0010319|stromule;GO:0016491|oxidoreductase activity | GhM_A01G2623.1,GhM_D11G3644.1,GhM_D11G3645.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2389:GhM_D09G0935.1,GhM_D09G0936.1;TA3538:GhM_A09G1000.1,GhM_A09G1001.1 | AT4G32480 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G0282.1,GhM_D06G2576.1,GhM_D10G0267.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2398:GhM_D09G1244.1,GhM_D09G1245.1;TA3547:GhM_A09G1316.1,GhM_A09G1317.1 | AT3G11840||AT2G35930 | PUB23; PUB23 (PLANT U-BOX 23); ubiquitin-protein ligase||PUB24; PUB24 (PLANT U-BOX 24); binding / ubiquitin-protein ligase | GO:0016567|protein ubiquitination;GO:0005488|binding;GO:0010200|response to chitin;GO:0000151|ubiquitin ligase complex;GO:0006952|defense response;GO:0005829|cytosol;GO:0009414|response to water deprivation;GO:0004842|ubiquitin-protein ligase activity;GO:0051865|protein autoubiquitination;GO:0002679|respiratory burst involved in defense response | GhM_A07G1366.1,GhM_D07G1344.1,GhM_A05G0860.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2411:GhM_D09G1634.1,GhM_D09G1635.1;TA3562:GhM_A09G1768.1,GhM_A09G1769.1 | AT2G36190||AT3G52600 | AtcwINV4; AtcwINV4 (Arabidopsis thaliana cell wall invertase 4); hydrolase, hydrolyzing O-glycosyl compounds||AtcwINV2; AtcwINV2 (Arabidopsis thaliana cell wall invertase 2); hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0019575|sucrose catabolic process, using beta-fructofuranosidase | GhM_A04G0833.1,GhM_D04G1224.1,GhM_D01G2484.1 | 7 | 2 | Gossypium | Cotton | |||
| TA242:GhM_D06G0577.1,GhM_D06G0578.1,GhM_D06G0580.1,GhM_D06G0581.1,GhM_D06G0582.1;TA3283:GhM_A06G0577.1,GhM_A06G0578.1 | AT2G46490||AT5G35110 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA2434:GhM_D09G2413.1,GhM_D09G2414.1;TA3581:GhM_A09G2531.1,GhM_A09G2533.1 | AT1G60710||AT1G60730||AT1G60750 | aldo/keto reductase family protein||oxidoreductase||ATB2; ATB2; oxidoreductase | GO:0046686|response to cadmium ion;GO:0004033|aldo-keto reductase activity;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_A10G1657.1,GhM_D10G1471.1,GhM_A09G2532.1 | 7 | 2 | Gossypium | Cotton | |||
| TA2506:GhM_D10G2355.1,GhM_D10G2356.1;TA3390:GhM_A07G1871.1,GhM_A07G1872.1 | - | - | - | GhM_A04G0515.1,GhM_A12G0863.1,GhM_A10G1720.1 | 7 | 2 | Gossypium | Cotton | |||
| TA255:GhM_D08G2747.1,GhM_D08G2748.1,GhM_D08G2750.1,GhM_D08G2751.1,GhM_D08G2752.1;TA3488:GhM_A08G2802.1,GhM_A08G2803.1 | AT5G54160||AT1G51990 | O-methyltransferase family 2 protein||ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0005829|cytosol;GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0005886|plasma membrane;GO:0047763|caffeate O-methyltransferase activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA2582:GhM_D11G1358.1,GhM_D11G1359.1;TA3404:GhM_A07G2504.1,GhM_A07G2506.1 | - | - | - | GhM_D06G1146.1,GhM_D12G2782.1,GhM_D01G1201.1 | 7 | 2 | Gossypium | Cotton | |||
| TA261:GhM_D09G2455.1,GhM_D09G2456.1,GhM_D09G2457.1,GhM_D09G2460.1,GhM_D09G2461.1;TA3582:GhM_A09G2577.1,GhM_A09G2578.1 | - | - | - | - | 7 | 2 | Gossypium | Cotton | |||
| TA304:GhM_A08G2295.1,GhM_A08G2298.1,GhM_A08G2299.1,GhM_A08G2303.1,GhM_A08G2304.1;TA2335:GhM_D08G2247.1,GhM_D08G2250.1 | AT2G45550||AT3G61040 | CYP76C7; CYP76C7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C4; CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA320:GhM_A10G2777.1,GhM_A10G2778.1,GhM_A10G2779.1,GhM_A10G2780.1;TA874:GhM_D10G2710.1,GhM_D10G2711.1,GhM_D10G2713.1 | AT2G39640||AT3G55430||AT2G16230 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative||catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||glycosyl hydrolase family 17 protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0005618|cell wall | - | 7 | 2 | Gossypium | Cotton | |||
| TA323:GhM_A10G2861.1,GhM_A10G2864.1,GhM_A10G2867.1,GhM_A10G2878.1;TA2528:GhM_D10G2833.1,GhM_D10G2834.1 | AT5G05960||AT3G53980 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0008289|lipid binding;GO:0006869|lipid transport | GhM_A13G1702.1 | 7 | 2 | Gossypium | Cotton | |||
| TA328:GhM_A11G1274.1,GhM_A11G1279.1,GhM_A11G1280.1,GhM_A11G1281.1;TA883:GhM_D11G1276.1,GhM_D11G1277.1,GhM_D11G1278.1 | - | - | - | - | 7 | 2 | Gossypium | Cotton | |||
| TA331:GhM_A11G2395.1,GhM_A11G2397.1,GhM_A11G2399.1,GhM_A11G2400.1;TA888:GhM_D11G2487.1,GhM_D11G2488.1,GhM_D11G2492.1 | AT1G17840||AT1G51500 | CER5, D3, ABCG12, WBC12, ATWBC12; CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances||WBC11, ABCG11, DSO, COF1, ATWBC11; WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter | GO:0009897|external side of plasma membrane;GO:0015908|fatty acid transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0010025|wax biosynthetic process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0015245|fatty acid transporter activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA333:GhM_A11G2994.1,GhM_A11G2995.1,GhM_A11G2996.1,GhM_A11G2998.1;TA889:GhM_D11G2924.1,GhM_D11G2925.1,GhM_D11G2929.1 | - | - | - | - | 7 | 2 | Gossypium | Cotton | |||
| TA343:GhM_A13G0468.1,GhM_A13G0469.1,GhM_A13G0470.1,GhM_A13G0471.1;TA932:GhM_D13G0455.1,GhM_D13G0456.1,GhM_D13G0457.1 | AT4G34131||AT2G15490||AT4G34138 | UGT73B4; UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT73B1; UGT73B1 (UDP-glucosyl transferase 73B1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase||UGT73B3; UGT73B3 (UDP-glucosyl transferase 73B3); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring hexosyl groups | GO:0012505|endomembrane system;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0010294|abscisic acid glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0051707|response to other organism | - | 7 | 2 | Gossypium | Cotton | |||
| TA361:GhM_D02G0661.1,GhM_D02G0662.1,GhM_D02G0663.1,GhM_D02G0664.1;TA955:GhM_A02G0670.1,GhM_A02G0671.1,GhM_A02G0672.1 | AT5G52605 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 7 | 2 | Gossypium | Cotton | |||
| TA367:GhM_D02G2165.1,GhM_D02G2166.1,GhM_D02G2167.1,GhM_D02G2169.1;TA972:GhM_A03G2144.1,GhM_A03G2145.1,GhM_A03G2146.1 | AT4G10270 | wound-responsive family protein | GO:0009611|response to wounding;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA368:GhM_D02G2181.1,GhM_D02G2182.1,GhM_D02G2183.1,GhM_D02G2184.1;TA3021:GhM_A03G2159.1,GhM_A03G2160.1 | AT2G19130 | S-locus lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D12G1710.1 | 7 | 2 | Gossypium | Cotton | |||
| TA369:GhM_D02G2516.1,GhM_D02G2517.1,GhM_D02G2518.1,GhM_D02G2520.1;TA975:GhM_A03G2494.1,GhM_A03G2495.1,GhM_A03G2497.1 | AT3G48690||AT3G48700 | ATCXE12, CXE12; CXE12; carboxylesterase||ATCXE13; ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13); hydrolase | GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0005737|cytoplasm;GO:0004091|carboxylesterase activity;GO:0005575|cellular_component | - | 7 | 2 | Gossypium | Cotton | |||
| TA380:GhM_D04G1833.1,GhM_D04G1835.1,GhM_D04G1838.1,GhM_D04G1839.1;TA1002:GhM_A04G1349.1,GhM_A04G1351.1,GhM_A04G1353.1 | AT3G51000||AT4G02340 | epoxide hydrolase, putative | GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0004301|epoxide hydrolase activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA390:GhM_D05G3963.1,GhM_D05G3966.1,GhM_D05G3967.1,GhM_D05G3970.1;TA990:GhM_A04G0411.1,GhM_A04G0412.1,GhM_A04G0414.1 | AT4G34590 | ATB2, GBF6, AtbZIP11, BZIP11; GBF6 (G-BOX BINDING FACTOR 6); DNA binding / protein heterodimerization/ transcription factor | GO:0009507|chloroplast;GO:0009744|response to sucrose stimulus;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0017148|negative regulation of translation;GO:0046982|protein heterodimerization activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA414:GhM_D08G0968.1,GhM_D08G0969.1,GhM_D08G0975.1,GhM_D08G0976.1;TA3452:GhM_A08G1014.1,GhM_A08G1015.1 | AT5G01750 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A03G1133.1 | 7 | 2 | Gossypium | Cotton | |||
| TA422:GhM_D08G3039.1,GhM_D08G3040.1,GhM_D08G3041.1,GhM_D08G3042.1;TA1107:GhM_A08G3109.1,GhM_A08G3110.1,GhM_A08G3111.1 | AT5G19580 | glyoxal oxidase-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA438:GhM_D10G2027.1,GhM_D10G2028.1,GhM_D10G2029.1,GhM_D10G2031.1;TA550:GhM_A10G2091.1,GhM_A10G2092.1,GhM_A10G2093.1 | - | - | - | - | 7 | 2 | Gossypium | Cotton | |||
| TA444:GhM_D11G0964.1,GhM_D11G0965.1,GhM_D11G0966.1,GhM_D11G0967.1;TA573:GhM_A11G0950.1,GhM_A11G0951.1,GhM_A11G0952.1 | AT2G45510 | CYP704A2; CYP704A2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA457:GhM_D13G0032.1,GhM_D13G0033.1,GhM_D13G0034.1,GhM_D13G0035.1;TA618:GhM_A13G0031.1,GhM_A13G0032.1,GhM_A13G0033.1 | AT3G50170||AT3G50130||AT3G50140 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA468:GhM_D13G2028.1,GhM_D13G2029.1,GhM_D13G2030.1,GhM_D13G2032.1;TA634:GhM_A13G2148.1,GhM_A13G2149.1,GhM_A13G2150.1 | AT2G44930||AT4G31980 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA472:GhM_A02G2019.1,GhM_A02G2020.1,GhM_A02G2021.1,GhM_A02G2022.1;TA1730:GhM_D03G0246.1,GhM_D03G0247.1 | AT2G32390||AT2G17260||AT4G35290 | GLUR2, GLR3.2, ATGLR3.2, ATGLUR2; GLUR2 (GLUTAMATE RECEPTOR 2); intracellular ligand-gated ion channel||GLR2, ATGLR2, GLR3.1, ATGLR3.1; GLR2 (GLUTAMATE RECEPTOR 2); intracellular ligand-gated ion channel||ATGLR3.5, GLR3.5, GLR6; ATGLR3.5 (GLUTAMATE RECEPTOR 3.5); intracellular ligand-gated ion channel | GO:0012505|endomembrane system;GO:0030007|cellular potassium ion homeostasis;GO:0006883|cellular sodium ion homeostasis;GO:0010118|stomatal movement;GO:0009416|response to light stimulus;GO:0006874|cellular calcium ion homeostasis;GO:0005217|intracellular ligand-gated ion channel activity;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_D03G0245.1 | 7 | 2 | Gossypium | Cotton | |||
| TA480:GhM_A03G1936.1,GhM_A03G1937.1,GhM_A03G1939.1,GhM_A03G1940.1;TA673:GhM_D02G1982.1,GhM_D02G1984.1,GhM_D02G1985.1 | AT1G59950||AT1G59960 | aldo/keto reductase, putative | GO:0009651|response to salt stress;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA494:GhM_A05G0773.1,GhM_A05G0774.1,GhM_A05G0775.1,GhM_A05G0776.1;TA1891:GhM_D05G0798.1,GhM_D05G0799.1 | AT5G25610 | RD22; RD22; nutrient reservoir | GO:0012505|endomembrane system;GO:0009737|response to abscisic acid stimulus;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity;GO:0009269|response to desiccation | GhM_D05G0800.1 | 7 | 2 | Gossypium | Cotton | |||
| TA511:GhM_A07G2384.1,GhM_A07G2387.1,GhM_A07G2388.1,GhM_A07G2390.1;TA809:GhM_D07G2300.1,GhM_D07G2302.1,GhM_D07G2303.1 | AT3G20800 | rcd1-like cell differentiation protein, putative | GO:0005575|cellular_component;GO:0007275|multicellular organismal development;GO:0003674|molecular_function | - | 7 | 2 | Gossypium | Cotton | |||
| TA519:GhM_A08G0620.1,GhM_A08G0624.1,GhM_A08G0626.1,GhM_A08G0627.1;TA820:GhM_D08G0590.1,GhM_D08G0591.1,GhM_D08G0593.1 | AT1G72520||AT3G22400 | LOX5; LOX5; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen||lipoxygenase, putative | GO:0009695|jasmonic acid biosynthetic process;GO:0048364|root development;GO:0009507|chloroplast;GO:0040007|growth;GO:0016702|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0009611|response to wounding;GO:0006952|defense response;GO:0005506|iron ion binding;GO:0016165|lipoxygenase activity;GO:0046872|metal ion binding;GO:0009055|electron carrier activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA520:GhM_A08G0745.1,GhM_A08G0747.1,GhM_A08G0748.1,GhM_A08G0749.1;TA821:GhM_D08G0712.1,GhM_D08G0715.1,GhM_D08G0716.1 | AT2G44840 | ATERF13, EREBP, ERF13; ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | - | 7 | 2 | Gossypium | Cotton | |||
| TA521:GhM_A08G1405.1,GhM_A08G1406.1,GhM_A08G1407.1,GhM_A08G1408.1;TA825:GhM_D08G1447.1,GhM_D08G1448.1,GhM_D08G1449.1 | AT5G53110 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G46495.1); Has 118 Blast hits to 116 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system | - | 7 | 2 | Gossypium | Cotton | |||
| TA539:GhM_A10G0934.1,GhM_A10G0936.1,GhM_A10G0937.1;TA856:GhM_D10G1132.1,GhM_D10G1133.1,GhM_D10G1134.1 | AT2G19440||AT5G64790||AT1G10500 | ATCPISCA; ATCPISCA (chloroplast-localized IscA-like protein); structural molecule||glycosyl hydrolase family 17 protein | GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0016226|iron-sulfur cluster assembly;GO:0043169|cation binding;GO:0009570|chloroplast stroma;GO:0005886|plasma membrane;GO:0005198|structural molecule activity | GhM_A10G0952.1 | 7 | 2 | Gossypium | Cotton | |||
| TA542:GhM_A10G1578.1,GhM_A10G1579.1,GhM_A10G1585.1;TA861:GhM_D10G1524.1,GhM_D10G1530.1,GhM_D10G1531.1 | AT2G31990||AT4G13990 | exostosin family protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0005618|cell wall | GhM_A09G2506.1 | 7 | 2 | Gossypium | Cotton | |||
| TA557:GhM_A10G2419.1,GhM_A10G2422.1,GhM_A10G2424.1;TA2505:GhM_D10G2346.1,GhM_D10G2348.1 | AT5G54160 | ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0005829|cytosol;GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0005886|plasma membrane;GO:0047763|caffeate O-methyltransferase activity | GhM_A10G2420.1,GhM_A10G2421.1 | 7 | 2 | Gossypium | Cotton | |||
| TA568:GhM_A11G0086.1,GhM_A11G0087.1,GhM_A11G0089.1;TA2540:GhM_D11G0090.1,GhM_D11G0093.1 | AT4G12300||AT4G12320||AT4G12310 | CYP706A6; CYP706A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A5; CYP706A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP706A4; CYP706A4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A04G0190.1,GhM_D05G4189.1 | 7 | 2 | Gossypium | Cotton | |||
| TA571:GhM_A11G0377.1,GhM_A11G0378.1,GhM_A11G0379.1;TA881:GhM_D11G0361.1,GhM_D11G0362.1,GhM_D11G0363.1 | AT2G47140 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D09G0443.1 | 7 | 2 | Gossypium | Cotton | |||
| TA574:GhM_A11G1285.1,GhM_A11G1286.1,GhM_A11G1287.1;TA2579:GhM_D11G1283.1,GhM_D11G1284.1 | AT2G16760 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47370.1); Has 78 Blast hits to 78 proteins in 24 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A08G1630.1,GhM_D08G1585.1 | 7 | 2 | Gossypium | Cotton | |||
| TA593:GhM_A11G3696.1,GhM_A11G3697.1,GhM_A11G3698.1;TA895:GhM_D11G3623.1,GhM_D11G3624.1,GhM_D11G3625.1 | AT4G00872 | enzyme inhibitor/ pectinesterase | GO:0008150|biological_process | GhM_Scaf078G226.1 | 7 | 2 | Gossypium | Cotton | |||
| TA596:GhM_A11G4023.1,GhM_A11G4037.1,GhM_A11G4038.1;TA2674:GhM_D11G3930.1,GhM_D11G3933.1 | - | - | - | GhM_D11G3911.1,GhM_D11G3931.1 | 7 | 2 | Gossypium | Cotton | |||
| TA599:GhM_A12G0328.1,GhM_A12G0329.1,GhM_A12G0330.1;TA905:GhM_D12G0466.1,GhM_D12G0467.1,GhM_D12G0469.1 | AT5G42650 | AOS, CYP74A, DDE2; AOS (ALLENE OXIDE SYNTHASE); allene oxide synthase/ hydro-lyase/ oxygen binding | GO:0009579|thylakoid;GO:0009941|chloroplast envelope;GO:0016020|membrane | GhM_A04G1502.1 | 7 | 2 | Gossypium | Cotton | |||
| TA613:GhM_A12G3010.1,GhM_A12G3011.1,GhM_A12G3013.1;TA922:GhM_D12G2896.1,GhM_D12G2898.1,GhM_D12G2899.1 | AT5G24600 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane | GhM_Scaf049G189.1 | 7 | 2 | Gossypium | Cotton | |||
| TA620:GhM_A13G0277.1,GhM_A13G0278.1,GhM_A13G0279.1;TA928:GhM_D13G0262.1,GhM_D13G0263.1,GhM_D13G0264.1 | - | - | - | GhM_D01G1445.1 | 7 | 2 | Gossypium | Cotton | |||
| TA635:GhM_A13G2159.1,GhM_A13G2160.1,GhM_A13G2161.1;TA2829:GhM_D13G2041.1,GhM_D13G2043.1 | AT5G07610||AT1G47790 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A13G2158.1,GhM_D13G2044.1 | 7 | 2 | Gossypium | Cotton | |||
| TA637:GhM_A13G2223.1,GhM_A13G2226.1,GhM_A13G2227.1;TA2834:GhM_D13G2108.1,GhM_D13G2112.1 | AT2G20340 | tyrosine decarboxylase, putative | GO:0006520|cellular amino acid metabolic process;GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0009611|response to wounding;GO:0016831|carboxy-lyase activity;GO:0004837|tyrosine decarboxylase activity;GO:0005575|cellular_component | GhM_A07G0858.1,GhM_D07G0860.1 | 7 | 2 | Gossypium | Cotton | |||
| TA643:GhM_A13G2988.1,GhM_A13G2989.1,GhM_A13G2990.1;TA948:GhM_D13G2896.1,GhM_D13G2898.1,GhM_D13G2899.1 | AT2G30150||AT2G30140 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_D13G2897.1 | 7 | 2 | Gossypium | Cotton | |||
| TA645:GhM_D01G0106.1,GhM_D01G0107.1,GhM_D01G0108.1;TA778:GhM_A01G0127.1,GhM_A01G0128.1,GhM_A01G0129.1 | - | - | - | GhM_D01G1110.1 | 7 | 2 | Gossypium | Cotton | |||
| TA659:GhM_D01G2065.1,GhM_D01G2066.1,GhM_D01G2067.1;TA2171:GhM_A01G2096.1,GhM_A01G2097.1 | AT2G16730 | BGAL13; BGAL13; beta-galactosidase | GO:0012505|endomembrane system;GO:0005990|lactose catabolic process;GO:0005975|carbohydrate metabolic process;GO:0019515|lactose catabolic process via UDP-galactose;GO:0004565|beta-galactosidase activity;GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase;GO:0009341|beta-galactosidase complex | GhM_D12G0387.1,GhM_A12G0406.1 | 7 | 2 | Gossypium | Cotton | |||
| TA676:GhM_D02G2466.1,GhM_D02G2467.1,GhM_D02G2468.1;TA974:GhM_A03G2443.1,GhM_A03G2444.1,GhM_A03G2446.1 | AT4G15480||AT2G23260||AT2G31790 | UGT84B1; UGT84B1 (UDP-glucosyl transferase 84B1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ indole-3-acetate beta-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT84A1; UGT84A1; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0010224|response to UV-B;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0050284|sinapate 1-glucosyltransferase activity;GO:0010294|abscisic acid glucosyltransferase activity;GO:0047215|indole-3-acetate beta-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A03G2445.1 | 7 | 2 | Gossypium | Cotton | |||
| TA680:GhM_D03G0534.1,GhM_D03G0536.1,GhM_D03G0537.1;TA2931:GhM_A02G1808.1,GhM_A02G1809.1 | AT1G28130||AT5G51470||AT5G13360 | auxin-responsive GH3 family protein||GH3.17; GH3.17; indole-3-acetic acid amido synthetase | GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0010252|auxin homeostasis;GO:0005575|cellular_component;GO:0010279|indole-3-acetic acid amido synthetase activity | GhM_A11G2923.1,GhM_D03G0535.1 | 7 | 2 | Gossypium | Cotton | |||
| TA684:GhM_D03G1468.1,GhM_D03G1469.1,GhM_D03G1477.1;TA2979:GhM_A03G0644.1,GhM_A03G0645.1 | AT5G59030||AT2G26975 | copper transporter, putative||COPT1; COPT1 (copper transporter 1); copper ion transmembrane transporter | GO:0048364|root development;GO:0005375|copper ion transmembrane transporter activity;GO:0006825|copper ion transport;GO:0048235|pollen sperm cell differentiation;GO:0016020|membrane;GO:0005773|vacuole | GhM_A05G1009.1,GhM_D05G1023.1 | 7 | 2 | Gossypium | Cotton | |||
| TA687:GhM_D03G1695.1,GhM_D03G1696.1,GhM_D03G1697.1;TA2968:GhM_A03G0430.1,GhM_A03G0431.1 | AT1G08110 | lactoylglutathione lyase, putative / glyoxalase I, putative | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005975|carbohydrate metabolic process;GO:0005516|calmodulin binding;GO:0004462|lactoylglutathione lyase activity | GhM_D13G2876.1,GhM_A13G2971.1 | 7 | 2 | Gossypium | Cotton | |||
| TA703:GhM_D04G0751.1,GhM_D04G0753.1,GhM_D04G0756.1;TA1045:GhM_A05G4171.1,GhM_A05G4172.1,GhM_A05G4174.1 | AT3G21420 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A08G2214.1 | 7 | 2 | Gossypium | Cotton | |||
| TA713:GhM_D04G2195.1,GhM_D04G2196.1,GhM_D04G2198.1;TA1010:GhM_A04G1725.1,GhM_A04G1726.1,GhM_A04G1729.1 | - | - | - | GhM_A04G1727.1 | 7 | 2 | Gossypium | Cotton | |||
| TA808:GhM_D07G1505.1,GhM_D07G1506.1,GhM_D07G1508.1;TA3381:GhM_A07G1538.1,GhM_A07G1539.1 | AT5G46930||AT5G46940 | invertase/pectin methylesterase inhibitor family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0030599|pectinesterase activity | GhM_A03G0092.1,GhM_D03G2008.1 | 7 | 2 | Gossypium | Cotton | |||
| TA904:GhM_D12G0392.1,GhM_D12G0393.1,GhM_D12G0395.1;TA1358:GhM_A12G0399.1,GhM_A12G0400.1 | AT5G42190||AT1G75950||AT1G20140 | ASK2, SKP1B; ASK2 (ARABIDOPSIS SKP1-LIKE 2); protein binding / ubiquitin-protein ligase||ASK4; ASK4 (ARABIDOPSIS SKP1-LIKE 4); protein binding / ubiquitin-protein ligase||SKP1, ASK1, ATSKP1, SKP1A, UIP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase | GO:0007140|male meiosis;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0005819|spindle;GO:0046686|response to cadmium ion;GO:0009793|embryonic development ending in seed dormancy;GO:0005634|nucleus;GO:0000151|ubiquitin ligase complex;GO:0007067|mitosis;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0045910|negative regulation of DNA recombination;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0004842|ubiquitin-protein ligase activity | GhM_D12G0916.1,GhM_D02G0939.1 | 7 | 2 | Gossypium | Cotton | |||
| TA919:GhM_D12G2251.1,GhM_D12G2253.1,GhM_D12G2254.1;TA1418:GhM_A12G2355.1,GhM_A12G2358.1 | AT4G24730 | calcineurin-like phosphoesterase family protein | GO:0008150|biological_process;GO:0004722|protein serine/threonine phosphatase activity;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_A03G1008.1,GhM_D03G1235.1 | 7 | 2 | Gossypium | Cotton | |||
| TA920:GhM_D12G2600.1,GhM_D12G2601.1,GhM_D12G2602.1;TA1430:GhM_A12G2714.1,GhM_A12G2715.1 | AT2G45040||AT4G16640 | matrix metalloproteinase, putative||matrix metalloproteinase | GO:0006508|proteolysis;GO:0031225|anchored to membrane;GO:0008152|metabolic process | GhM_A11G0304.1,GhM_D11G0289.1 | 7 | 2 | Gossypium | Cotton | |||
| TA924:GhM_D12G3090.1,GhM_D12G3091.1,GhM_D12G3092.1;TA1444:GhM_A12G3203.1,GhM_A12G3206.1 | AT5G51970 | sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0016491|oxidoreductase activity | GhM_A09G0589.1,GhM_D09G0498.1 | 7 | 2 | Gossypium | Cotton | |||
| TA927:GhM_D13G0125.1,GhM_D13G0126.1,GhM_D13G0127.1;TA1456:GhM_A13G0125.1,GhM_A13G0130.1 | AT3G54250||AT2G38700 | mevalonate diphosphate decarboxylase, putative||MVD1, ATMVD1; MVD1 (MEVALONATE DIPHOSPHATE DECARBOXYLASE 1); diphosphomevalonate decarboxylase/ protein homodimerization | GO:0008610|lipid biosynthetic process;GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway;GO:0005575|cellular_component;GO:0042803|protein homodimerization activity;GO:0016310|phosphorylation;GO:0004163|diphosphomevalonate decarboxylase activity;GO:0016301|kinase activity;GO:0008299|isoprenoid biosynthetic process;GO:0005524|ATP binding | GhM_D11G2307.1,GhM_D06G0670.1 | 7 | 2 | Gossypium | Cotton | |||
| TA959:GhM_A02G1753.1,GhM_A02G1754.1,GhM_A02G1755.1;TA1739:GhM_D03G0478.1,GhM_D03G0479.1 | AT4G39650||AT4G39640 | GGT2; GGT2 (GAMMA-GLUTAMYL TRANSPEPTIDASE 2); gamma-glutamyltransferase/ glutathione gamma-glutamylcysteinyltransferase||GGT1; GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1); gamma-glutamyltransferase/ glutathione gamma-glutamylcysteinyltransferase | GO:0009505|plant-type cell wall;GO:0006751|glutathione catabolic process;GO:0048046|apoplast;GO:0003840|gamma-glutamyltransferase activity;GO:0016756|glutathione gamma-glutamylcysteinyltransferase activity | GhM_A11G0638.1,GhM_D11G0646.1 | 7 | 2 | Gossypium | Cotton | |||
| TA965:GhM_A02G2076.1,GhM_A02G2078.1,GhM_A02G2081.1;TA1727:GhM_D03G0183.1,GhM_D03G0184.1 | AT2G23740 | nucleic acid binding / transcription factor/ zinc ion binding | GO:0005634|nucleus;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0016568|chromatin modification | GhM_D11G2927.1,GhM_D11G1550.1 | 7 | 2 | Gossypium | Cotton | |||
| TA1466:GhM_A13G0460.1,GhM_A13G0461.1;TA3027:GhM_A03G2467.1,GhM_A03G2469.1;TA1704:GhM_D02G2490.1,GhM_D02G2492.1 | AT5G53390 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D13G0450.1 | 7 | 3 | Gossypium | Cotton | |||
| TA1680:GhM_D02G1016.1,GhM_D02G1017.1;TA3171:GhM_A05G2259.1,GhM_A05G2260.1;TA1931:GhM_D05G2277.1,GhM_D05G2278.1 | AT1G47480 | hydrolase | GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_A03G1108.1 | 7 | 3 | Gossypium | Cotton | |||
| TA1926:GhM_D05G2105.1,GhM_D05G2106.1;TA3260:GhM_A06G0044.1,GhM_A06G0046.1;TA2005:GhM_D06G0041.1,GhM_D06G0043.1 | AT1G75750||AT2G18420 | GASA1; GASA1 (GAST1 PROTEIN HOMOLOG 1)||Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein | GO:0009826|unidimensional cell growth;GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0009739|response to gibberellin stimulus;GO:0003674|molecular_function;GO:0009737|response to abscisic acid stimulus;GO:0009741|response to brassinosteroid stimulus | GhM_A05G2086.1 | 7 | 3 | Gossypium | Cotton | |||
| TA2016:GhM_D06G0318.1,GhM_D06G0320.1;TA3175:GhM_A05G2421.1,GhM_A05G2422.1;TA3268:GhM_A06G0305.1,GhM_A06G0306.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_D05G2433.1 | 7 | 3 | Gossypium | Cotton | |||
| - | AT2G17040 | anac036; anac036 (Arabidopsis NAC domain containing protein 36); transcription factor | GO:0009965|leaf morphogenesis;GO:0048281|inflorescence morphogenesis;GO:0007275|multicellular organismal development;GO:0010200|response to chitin;GO:0003700|transcription factor activity;GO:0045792|negative regulation of cell size;GO:0005575|cellular_component | GhM_A01G0037.1,GhM_D01G0020.1,GhM_A03G2689.1,GhM_D02G2709.1,GhM_A12G0374.1,GhM_D12G0418.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G16770 | DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A01G0048.1,GhM_D01G0030.1,GhM_A01G2103.1,GhM_D01G2072.1,GhM_A03G2649.1,GhM_D02G2668.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G38600 | KAK, UPL3; KAK (KAKTUS); ubiquitin-protein ligase | GO:0005886|plasma membrane;GO:0010091|trichome branching;GO:0042023|DNA endoreduplication;GO:0004842|ubiquitin-protein ligase activity | GhM_A01G0049.1,GhM_D01G0031.1,GhM_A01G2094.1,GhM_D01G2060.1,GhM_A12G0410.1,GhM_D12G0386.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39050 | kinesin-related protein (MKRP2) | GO:0005515|protein binding;GO:0007018|microtubule-based movement;GO:0009507|chloroplast;GO:0003777|microtubule motor activity;GO:0008270|zinc ion binding;GO:0005875|microtubule associated complex;GO:0005524|ATP binding | GhM_A01G0062.1,GhM_D01G0044.1,GhM_A04G1611.1,GhM_D04G2091.1,GhM_A13G0342.1,GhM_D13G0329.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39080 | VHA-A3; VHA-A3 (VACUOLAR PROTON ATPASE A3); ATPase | GO:0009507|chloroplast;GO:0005774|vacuolar membrane;GO:0016887|ATPase activity;GO:0009678|hydrogen-translocating pyrophosphatase activity;GO:0015986|ATP synthesis coupled proton transport;GO:0031669|cellular response to nutrient levels;GO:0000325|plant-type vacuole;GO:0005886|plasma membrane;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G0064.1,GhM_D01G0046.1,GhM_A01G1255.1,GhM_D01G1223.1,GhM_A13G0347.1,GhM_D13G0333.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G21650||AT4G39250 | MEE3, ATRL2; MEE3 (MATERNAL EFFECT EMBRYO ARREST 3); DNA binding / transcription factor||ATRL1; ATRL1 (ARABIDOPSIS RAD-LIKE 1); DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009793|embryonic development ending in seed dormancy;GO:0006355|regulation of transcription, DNA-dependent | GhM_A01G0073.1,GhM_D01G0055.1,GhM_A03G2544.1,GhM_D02G2571.1,GhM_A13G0378.1,GhM_D13G0364.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09790||AT3G02210 | COBL6; COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)||COBL1; COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR) | GO:0008150|biological_process;GO:0031225|anchored to membrane;GO:0003674|molecular_function | GhM_A01G0078.1,GhM_D01G0060.1,GhM_A12G0291.1,GhM_D12G0295.1,GhM_A13G0406.1,GhM_D13G0388.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G19280 | FUT11, ATFUT11, FUCT1, FUCTA; FUT11 (FUCOSYLTRANSFERASE 11); 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase/ fucosyltransferase/ transferase, transferring glycosyl groups | GO:0017083|4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity;GO:0008417|fucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0006487|protein amino acid N-linked glycosylation | GhM_A01G0101.1,GhM_D01G0081.1,GhM_A12G0260.1,GhM_D12G0272.1,GhM_A13G0447.1,GhM_D13G0437.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G14910 | unknown protein | GO:0009507|chloroplast | GhM_A01G0116.1,GhM_D01G0096.1,GhM_A03G2436.1,GhM_D02G2459.1,GhM_A13G0489.1,GhM_D13G0478.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G14835 | zinc finger (C3HC4-type RING finger) family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A01G0121.1,GhM_D01G0101.1,GhM_A03G2415.1,GhM_D02G2434.1,GhM_A12G0215.1,GhM_D12G0220.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57880||AT1G51570 | C2 domain-containing protein | GO:0000162|tryptophan biosynthetic process;GO:0003674|molecular_function;GO:0005783|endoplasmic reticulum;GO:0005618|cell wall | GhM_A01G0124.1,GhM_D01G1115.1,GhM_A10G2316.1,GhM_D10G2241.1,GhM_D01G0104.1,GhM_D01G1105.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G50030 | TOR; TOR (TARGET OF RAPAMYCIN); 1-phosphatidylinositol-3-kinase/ protein binding | GO:0005515|protein binding;GO:0009793|embryonic development ending in seed dormancy;GO:0009507|chloroplast;GO:0016303|1-phosphatidylinositol-3-kinase activity | GhM_A01G0134.1,GhM_D01G0113.1,GhM_A12G0197.1,GhM_D12G0204.1,GhM_A12G1182.1,GhM_A02G1565.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G50370||AT3G19980 | ATFYPP3, EMB2736, STPP; ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3); protein binding / protein serine/threonine kinase/ protein serine/threonine phosphatase||serine/threonine protein phosphatase, putative | GO:0008150|biological_process;GO:0005515|protein binding;GO:0016787|hydrolase activity;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0005737|cytoplasm;GO:0000159|protein phosphatase type 2A complex;GO:0009910|negative regulation of flower development;GO:0004722|protein serine/threonine phosphatase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0172.1,GhM_D01G0151.1,GhM_A03G2235.1,GhM_D02G2261.1,GhM_A04G1423.1,GhM_D04G1909.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G20000 | TOM40; TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel | GO:0005742|mitochondrial outer membrane translocase complex;GO:0006626|protein targeting to mitochondrion;GO:0006820|anion transport;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005739|mitochondrion;GO:0005741|mitochondrial outer membrane;GO:0005886|plasma membrane;GO:0008308|voltage-gated anion channel activity;GO:0005743|mitochondrial inner membrane | GhM_A01G0173.1,GhM_D01G0152.1,GhM_A03G2231.1,GhM_D02G2257.1,GhM_A04G1416.1,GhM_D04G1901.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G13530 | MAPKKK7, MAP3KE1; MAPKKK7; ATP binding / binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0004672|protein kinase activity;GO:0009555|pollen development;GO:0004713|protein tyrosine kinase activity;GO:0005488|binding;GO:0007009|plasma membrane organization;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0183.1,GhM_D01G0163.1,GhM_A03G2195.1,GhM_D02G2219.1,GhM_A12G1741.1,GhM_D12G1691.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G19760 | eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative | GO:0005515|protein binding;GO:0005634|nucleus;GO:0006397|mRNA processing;GO:0005730|nucleolus;GO:0008026|ATP-dependent helicase activity;GO:0016607|nuclear speck;GO:0035145|exon-exon junction complex;GO:0016020|membrane;GO:0005654|nucleoplasm;GO:0001666|response to hypoxia | GhM_A01G0184.1,GhM_D01G0164.1,GhM_A12G1742.1,GhM_D12G1692.1,GhM_A13G0689.1,GhM_D13G0686.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G35730 | EXS family protein / ERD1/XPR1/SYG1 family protein | GO:0008150|biological_process;GO:0016021|integral to membrane;GO:0003674|molecular_function | GhM_A01G0187.1,GhM_D01G0167.1,GhM_A11G0977.1,GhM_D11G0988.1,GhM_A12G1373.1,GhM_D12G1316.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G04945 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 296 Blast hits to 294 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 94; Plants - 29; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0219.1,GhM_A08G0111.1,GhM_D08G1914.1,GhM_A08G1970.1,GhM_A11G2628.1,GhM_A11G2629.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13200 | GRAM domain-containing protein / ABA-responsive protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0237.1,GhM_D02G2070.1,GhM_A03G2038.1,GhM_A07G2953.1,GhM_D07G2855.1,GhM_D01G0210.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13190 | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 21 Blast hits to 21 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A01G0239.1,GhM_D01G0212.1,GhM_A03G2037.1,GhM_D02G2069.1,GhM_A12G1842.1,GhM_D12G1776.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G50850 | MAB1; MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring) | GO:0005886|plasma membrane;GO:0005730|nucleolus;GO:0042742|defense response to bacterium;GO:0003824|catalytic activity | GhM_A01G0243.1,GhM_D01G0215.1,GhM_A03G2031.1,GhM_D02G2066.1,GhM_A12G1844.1,GhM_D12G1778.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13110||AT5G35790 | G6PD2; G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2); glucose-6-phosphate dehydrogenase||G6PD1; G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1); glucose-6-phosphate dehydrogenase | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0006006|glucose metabolic process;GO:0009051|pentose-phosphate shunt, oxidative branch;GO:0004345|glucose-6-phosphate dehydrogenase activity | GhM_A01G0253.1,GhM_D01G0221.1,GhM_A03G2011.1,GhM_D02G2052.1,GhM_A11G1756.1,GhM_D11G1740.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G05970||AT5G27600 | LACS7, ATLACS7; LACS7 (LONG-CHAIN ACYL-COA SYNTHETASE 7); long-chain-fatty-acid-CoA ligase/ protein binding||LACS6, ATLACS6; LACS6 (long-chain acyl-CoA synthetase 6); long-chain-fatty-acid-CoA ligase | GO:0005515|protein binding;GO:0005777|peroxisome;GO:0010193|response to ozone;GO:0001676|long-chain fatty acid metabolic process;GO:0009651|response to salt stress;GO:0004467|long-chain-fatty-acid-CoA ligase activity;GO:0016020|membrane | GhM_A01G0259.1,GhM_D01G0227.1,GhM_A09G0801.1,GhM_D09G0742.1,GhM_A11G3740.1,GhM_D11G3662.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19300 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 4766 Blast hits to 2044 proteins in 217 species: Archae - 72; Bacteria - 102; Metazoa - 2264; Fungi - 372; Plants - 195; Viruses - 4; Other Eukaryotes - 1757 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0262.1,GhM_D01G0229.1,GhM_D13G1093.1,GhM_A01G1996.1,GhM_A09G0504.1,GhM_D02G0996.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G22845 | emp24/gp25L/p24 protein-related | GO:0006810|transport;GO:0005773|vacuole | GhM_A01G0267.1,GhM_D01G0233.1,GhM_A09G2694.1,GhM_D09G2572.1,GhM_A10G1401.1,GhM_D10G1724.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G43830||AT3G22850 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005829|cytosol;GO:0005886|plasma membrane | GhM_A01G0268.1,GhM_D01G0234.1,GhM_A09G0818.1,GhM_D09G0760.1,GhM_A10G1428.1,GhM_D10G1692.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G05620 | PGR5; PGR5 (proton gradient regulation 5); electron carrier | GO:0009644|response to high light intensity;GO:0009507|chloroplast;GO:0009534|chloroplast thylakoid;GO:0009773|photosynthetic electron transport in photosystem I;GO:0009414|response to water deprivation;GO:0009535|chloroplast thylakoid membrane;GO:0009055|electron carrier activity | GhM_A01G0286.1,GhM_D01G0253.1,GhM_A09G2785.1,GhM_D09G2661.1,GhM_D10G1855.1,GhM_A10G1272.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G04510||AT2G33340 | nucleotide binding / ubiquitin-protein ligase||transducin family protein / WD-40 repeat family protein | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0004842|ubiquitin-protein ligase activity;GO:0042742|defense response to bacterium | GhM_A01G0287.1,GhM_D01G0254.1,GhM_A02G0477.1,GhM_D02G0472.1,GhM_A09G2782.1,GhM_D09G2658.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G06410 | nucleic acid binding / zinc ion binding | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A01G0291.1,GhM_D01G0260.1,GhM_D10G1976.1,GhM_A10G2038.1,GhM_D02G0524.1,GhM_A02G0538.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24860 | FPF1; FPF1 (FLOWERING PROMOTING FACTOR 1) | GO:0009911|positive regulation of flower development;GO:0009739|response to gibberellin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0294.1,GhM_D01G0271.1,GhM_A09G2917.1,GhM_D09G2778.1,GhM_A10G2047.1,GhM_D10G1987.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G15880||AT3G06910 | ULP1A; ULP1A (UB-LIKE PROTEASE 1A); SUMO-specific protease/ cysteine-type peptidase||ESD4; ESD4 (EARLY IN SHORT DAYS 4); SUMO-specific protease/ cysteine-type peptidase | GO:0005634|nucleus;GO:0009909|regulation of flower development;GO:0016926|protein desumoylation;GO:0006508|proteolysis;GO:0009911|positive regulation of flower development;GO:0005575|cellular_component | GhM_A01G0297.1,GhM_D01G0274.1,GhM_D10G2133.1,GhM_A10G2063.1,GhM_D10G1999.1,GhM_D06G1709.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G35155||AT5G45030 | catalytic | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0005575|cellular_component | GhM_A01G0365.1,GhM_D01G0355.1,GhM_A05G1622.1,GhM_D05G1636.1,GhM_A06G1862.1,GhM_D06G1815.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G14420 | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0005634|nucleus;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0008891|glycolate oxidase activity;GO:0016020|membrane | GhM_A01G0383.1,GhM_D01G0367.1,GhM_A05G1650.1,GhM_D05G1661.1,GhM_A09G1053.1,GhM_D09G0988.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G78420 | protein binding / zinc ion binding | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0006499|N-terminal protein myristoylation | GhM_A01G0392.1,GhM_D01G0378.1,GhM_D05G3863.1,GhM_A04G0519.1,GhM_A13G2045.1,GhM_D13G1934.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G53580 | GLX2-3, ETHE1, GLY3; GLY3 (GLYOXALASE II 3); hydrolase/ hydroxyacylglutathione hydrolase | GO:0009651|response to salt stress | GhM_A01G0432.1,GhM_D01G0423.1,GhM_D04G0655.1,GhM_D03G0158.1,GhM_D06G0295.1,GhM_D11G2080.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G78600 | LZF1, STH3; LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding | GO:0015995|chlorophyll biosynthetic process;GO:0045449|regulation of transcription;GO:0009718|anthocyanin biosynthetic process;GO:0010099|regulation of photomorphogenesis;GO:0009658|chloroplast organization;GO:0003700|transcription factor activity;GO:0016607|nuclear speck;GO:0008270|zinc ion binding | GhM_A01G0490.1,GhM_D01G0476.1,GhM_A08G3023.1,GhM_D08G2955.1,GhM_A11G3669.1,GhM_D11G3589.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29800 | phosphoinositide binding / zinc ion binding | GO:0007165|signal transduction;GO:0035091|phosphoinositide binding;GO:0008270|zinc ion binding | GhM_A01G0538.1,GhM_D01G0506.1,GhM_A10G0359.1,GhM_A06G2545.1,GhM_D06G2538.1,GhM_D10G0347.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G53320 | AtTLP7; AtTLP7 (TUBBY LIKE PROTEIN 7); phosphoric diester hydrolase/ transcription factor | GO:0008081|phosphoric diester hydrolase activity;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A01G0557.1,GhM_D01G0526.1,GhM_A04G0436.1,GhM_D05G3934.1,GhM_A08G3025.1,GhM_D08G2957.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G42680||AT3G58680 | MBF1B, ATMBF1B; MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B); DNA binding / transcription coactivator||MBF1A, ATMBF1A; MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A); DNA binding / transcription coactivator | GO:0005634|nucleus;GO:0045941|positive regulation of transcription;GO:0005737|cytoplasm;GO:0003713|transcription coactivator activity;GO:0003677|DNA binding;GO:0005730|nucleolus;GO:0006350|transcription;GO:0009723|response to ethylene stimulus | GhM_A01G0559.1,GhM_D01G0527.1,GhM_A04G0435.1,GhM_D05G3935.1,GhM_A08G3026.1,GhM_D08G2958.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G78810 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0560.1,GhM_D01G0528.1,GhM_A03G0276.1,GhM_A03G1254.1,GhM_A06G2378.1,GhM_A09G0874.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15030 | TCP4, MEE35; TCP4 (TCP family transcription factor 4); transcription factor | GO:0030154|cell differentiation;GO:0009965|leaf morphogenesis;GO:0045449|regulation of transcription;GO:0009793|embryonic development ending in seed dormancy;GO:0045962|positive regulation of development, heterochronic;GO:0003700|transcription factor activity;GO:0048366|leaf development;GO:0005575|cellular_component | GhM_A01G0612.1,GhM_D01G0575.1,GhM_A13G1996.1,GhM_A04G0390.1,GhM_D05G3985.1,GhM_D13G1896.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G53190||AT3G15070 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A01G0623.1,GhM_D01G0589.1,GhM_A11G3635.1,GhM_D11G3539.1,GhM_A13G1989.1,GhM_D13G1890.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G46030 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0625.1,GhM_D01G0592.1,GhM_A06G1758.1,GhM_D06G1693.1,GhM_A06G2570.1,GhM_D06G2562.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15120 | AAA-type ATPase family protein | GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding;GO:0016887|ATPase activity | GhM_A01G0635.1,GhM_D01G0602.1,GhM_A08G0301.1,GhM_D08G0292.1,GhM_A08G0302.1,GhM_A08G0303.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G53950 | CUC2, ANAC098; CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor | GO:0010072|primary shoot apical meristem specification;GO:0007275|multicellular organismal development;GO:0048504|regulation of timing of organ formation;GO:0003700|transcription factor activity;GO:0010160|formation of organ boundary;GO:0048366|leaf development;GO:0010223|secondary shoot formation;GO:0005575|cellular_component | GhM_A01G0642.1,GhM_D01G0607.1,GhM_A11G3616.1,GhM_D11G3517.1,GhM_A13G1979.1,GhM_D13G1879.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15350 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein | GO:0012505|endomembrane system;GO:0016051|carbohydrate biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0008375|acetylglucosaminyltransferase activity | GhM_A01G0665.1,GhM_D01G0630.1,GhM_A11G3595.1,GhM_D11G3505.1,GhM_A13G1960.1,GhM_D13G1855.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G53770||AT5G42320 | nucleotidyltransferase family protein||metallocarboxypeptidase/ zinc ion binding | GO:0008150|biological_process;GO:0016779|nucleotidyltransferase activity;GO:0003676|nucleic acid binding;GO:0006508|proteolysis;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G0679.1,GhM_D01G0644.1,GhM_A04G0891.1,GhM_A08G1962.1,GhM_A05G2016.1,GhM_A12G1678.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G27430 | CIP7; CIP7 (COP1-INTERACTING PROTEIN 7); transcription activator | GO:0015995|chlorophyll biosynthetic process;GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0009718|anthocyanin biosynthetic process;GO:0009416|response to light stimulus;GO:0005886|plasma membrane | GhM_A01G0703.1,GhM_D01G0670.1,GhM_D13G1841.1,GhM_A13G1946.1,GhM_A13G1947.1,GhM_D13G1842.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G52900 | disease resistance protein (TIR class), putative | GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0006952|defense response;GO:0007165|signal transduction | GhM_A01G0704.1,GhM_D01G0671.1,GhM_A04G0276.1,GhM_D05G4113.1,GhM_A08G0296.1,GhM_D08G0285.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15510 | ATNAC2, ANAC056, NARS1; ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_A01G0707.1,GhM_D01G0674.1,GhM_A04G0271.1,GhM_D05G4119.1,GhM_A13G1944.1,GhM_D13G1837.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G20900 | DGK5, ATDGK5; diacylglycerol kinase, putative | GO:0005575|cellular_component;GO:0004143|diacylglycerol kinase activity;GO:0007205|activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway | GhM_A01G0737.1,GhM_D01G0704.1,GhM_A13G0652.1,GhM_A12G1774.1,GhM_D12G1722.1,GhM_D13G0715.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G54530 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_A01G0766.1,GhM_D01G0730.1,GhM_A04G0230.1,GhM_D05G4158.1,GhM_A11G3526.1,GhM_D11G3448.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G54770 | THI1, TZ, THI4; THI1; protein homodimerization | GO:0009570|chloroplast stroma;GO:0009941|chloroplast envelope;GO:0009579|thylakoid | GhM_A01G0806.1,GhM_D01G0771.1,GhM_A05G1893.1,GhM_D05G1906.1,GhM_A06G1920.1,GhM_D06G1903.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G27060 | TOR1, SPR2, CN; TOR1 (TORTIFOLIA 1); microtubule binding | GO:0009826|unidimensional cell growth;GO:0007275|multicellular organismal development;GO:0008017|microtubule binding;GO:0010031|circumnutation;GO:0010005|cortical microtubule, transverse to long axis | GhM_A01G0835.1,GhM_D01G0799.1,GhM_A04G0187.1,GhM_D05G4190.1,GhM_A13G1876.1,GhM_D13G1768.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G27000 | ATRBP45C; ATRBP45C; RNA binding | GO:0003723|RNA binding | GhM_A01G0847.1,GhM_D01G0811.1,GhM_A08G0281.1,GhM_D08G0271.1,GhM_A13G1871.1,GhM_D13G1763.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G54920||AT1G54170 | unknown protein||CID3; CID3 (CTC-Interacting Domain 3) | ;GO:0003674|molecular_function | GhM_A01G0848.1,GhM_D05G4234.1,GhM_A04G0168.1,GhM_D01G0812.1,GhM_A04G0086.1,GhM_A10G0214.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G50660 | unknown protein | GO:0009507|chloroplast | GhM_A01G0852.1,GhM_D01G0815.1,GhM_A04G0165.1,GhM_D05G4237.1,GhM_A13G1869.1,GhM_D13G1761.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36480 | ATLCB1, LCB1, EMB2779, FBR11; ATLCB1 (LONG-CHAIN BASE1); protein binding / serine C-palmitoyltransferase | GO:0005515|protein binding;GO:0004758|serine C-palmitoyltransferase activity;GO:0016049|cell growth;GO:0030148|sphingolipid biosynthetic process;GO:0005783|endoplasmic reticulum | GhM_A01G0879.1,GhM_D10G0026.1,GhM_A10G0036.1,GhM_A10G1989.1,GhM_D10G0893.1,GhM_D01G0841.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G26850 | VTC2; VTC2 (vitamin c defective 2); GDP-D-glucose phosphorylase/ GDP-galactose:glucose-1-phosphate guanyltransferase/ GDP-galactose:mannose-1-phosphate guanyltransferase/ GDP-galactose:myoinositol-1-phosphate guanyltransferase/ galactose-1-phosphate guanylyltra | GO:0010475|galactose-1-phosphate guanylyltransferase (GDP) activity;GO:0010473|GDP-galactose:myoinositol-1-phosphate guanyltransferase activity;GO:0010471|GDP-galactose:mannose-1-phosphate guanyltransferase activity;GO:0019853|L-ascorbic acid biosynthetic process;GO:0008928|mannose-1-phosphate guanylyltransferase (GDP) activity;GO:0052544|callose deposition in cell wall during defense response;GO:0009408|response to heat;GO:0009753|response to jasmonic acid stimulus;GO:0010474|glucose-1-phosphate guanylyltransferase (GDP) activity;GO:0010472|GDP-galactose:glucose-1-phosphate guanyltransferase activity;GO:0042742|defense response to bacterium;GO:0005575|cellular_component | GhM_A01G0893.1,GhM_D01G0854.1,GhM_A04G0126.1,GhM_D05G4279.1,GhM_A13G1857.1,GhM_D13G1744.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G55230 | ATMAP65-1, MAP65-1; ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding | GO:0055028|cortical microtubule;GO:0031116|positive regulation of microtubule polymerization;GO:0000910|cytokinesis;GO:0005819|spindle;GO:0005634|nucleus;GO:0008017|microtubule binding;GO:0046785|microtubule polymerization;GO:0005737|cytoplasm;GO:0001578|microtubule bundle formation;GO:0007020|microtubule nucleation;GO:0010005|cortical microtubule, transverse to long axis;GO:0051322|anaphase;GO:0009524|phragmoplast;GO:0009574|preprophase band | GhM_A01G0909.1,GhM_D01G0867.1,GhM_A04G0115.1,GhM_D05G4291.1,GhM_A13G1847.1,GhM_D13G1735.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G26640 | WRKY20, AtWRKY20; WRKY20; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A01G0934.1,GhM_D01G0891.1,GhM_A08G0334.1,GhM_D13G1711.1,GhM_A13G1826.1,GhM_D08G0317.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12150||AT5G55860 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G17210.1); Has 136823 Blast hits to 68042 proteins in 2292 species: Archae - 1576; Bacteria - 22165; Metazoa - 64188; Fungi - 9966; Plants - 5333; Viruses - 600; Other Eukaryotes - 32995 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0987.1,GhM_D01G0956.1,GhM_A04G0049.1,GhM_D05G4370.1,GhM_A13G1785.1,GhM_D13G1661.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G55990 | CBL2, ATCBL2; CBL2 (CALCINEURIN B-LIKE 2); calcium ion binding | GO:0022626|cytosolic ribosome;GO:0005509|calcium ion binding;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G0999.1,GhM_D01G0969.1,GhM_A04G0058.1,GhM_D05G4357.1,GhM_A13G1771.1,GhM_D13G1649.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24360||AT2G17520 | ATIRE1-1, IRE1-1; IRE1-1 (INOSITOL REQUIRING 1-1); ATP binding / endoribonuclease, producing 5'-phosphomonoesters / kinase/ protein kinase/ protein serine/threonine kinase||IRE1A, ATIRE1-2, IRE1-2; IRE1A; endoribonuclease/ kinase | GO:0012505|endomembrane system;GO:0004521|endoribonuclease activity;GO:0004672|protein kinase activity;GO:0016891|endoribonuclease activity, producing 5'-phosphomonoesters;GO:0006397|mRNA processing;GO:0006468|protein amino acid phosphorylation;GO:0006987|activation of signaling protein activity involved in unfolded protein response;GO:0042406|extrinsic to endoplasmic reticulum membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G1125.1,GhM_D01G1088.1,GhM_A02G2263.1,GhM_D03G0008.1,GhM_A02G2264.1,GhM_A02G2265.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G76690 | OPR2, ATOPR2; OPR2 | GO:0016629|12-oxophytodienoate reductase activity;GO:0009611|response to wounding;GO:0005575|cellular_component | GhM_A01G1136.1,GhM_A01G1686.1,GhM_D05G1325.1,GhM_A05G1309.1,GhM_D01G1666.1,GhM_A01G1687.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G20580 | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative | GO:0005730|nucleolus | GhM_A01G1148.1,GhM_D01G1119.1,GhM_A02G1090.1,GhM_D02G1124.1,GhM_D05G2024.1,GhM_A05G2013.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G35790||AT1G76130 | ATAMY2, AMY2; AMY2 (ALPHA-AMYLASE-LIKE 2); alpha-amylase/ calcium ion binding / catalytic/ cation binding||ATPLDDELTA, PLDDELTA; ATPLDDELTA; phospholipase D | GO:0015630|microtubule cytoskeleton;GO:0003824|catalytic activity;GO:0012501|programmed cell death;GO:0046473|phosphatidic acid metabolic process;GO:0005509|calcium ion binding;GO:0005975|carbohydrate metabolic process;GO:0005980|glycogen catabolic process;GO:0043169|cation binding;GO:0004556|alpha-amylase activity;GO:0004630|phospholipase D activity;GO:0005576|extracellular region;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A01G1188.1,GhM_D01G1164.1,GhM_A05G2858.1,GhM_D05G2861.1,GhM_A06G0011.1,GhM_D06G0005.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75850||AT2G17790 | VPS35B; VPS35B (VPS35 HOMOLOG B)||VPS35A; VPS35A (VPS35 HOMOLOG A) | GO:0006886|intracellular protein transport;GO:0042147|retrograde transport, endosome to Golgi;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1208.1,GhM_D01G1182.1,GhM_A05G2069.1,GhM_D05G2084.1,GhM_A11G0525.1,GhM_D11G0510.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G47760 | ALG3; ALG3; alpha-1,3-mannosyltransferase/ catalytic | GO:0006486|protein amino acid glycosylation;GO:0000033|alpha-1,3-mannosyltransferase activity;GO:0003824|catalytic activity;GO:0005783|endoplasmic reticulum | GhM_A01G1222.1,GhM_A02G0841.1,GhM_A05G2676.1,GhM_A12G1996.1,GhM_A12G0112.1,GhM_D12G0121.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19940||AT1G75680 | AtGH9B5; AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||AtGH9B7; AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005886|plasma membrane | GhM_A01G1226.1,GhM_D01G1197.1,GhM_A05G2093.1,GhM_D05G2112.1,GhM_A06G0053.1,GhM_D06G0050.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G05150 | calcium-binding EF hand family protein | GO:0008150|biological_process;GO:0005509|calcium ion binding;GO:0005488|binding;GO:0005886|plasma membrane;GO:0008270|zinc ion binding | GhM_A01G1243.1,GhM_D01G1217.1,GhM_A05G2108.1,GhM_D05G2128.1,GhM_D10G2291.1,GhM_D02G1869.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19790||AT3G51060 | SRS7; SRS7 (SHI-RELATED SEQUENCE 7)||STY1, SRS1; STY1 (STYLISH 1); protein heterodimerization/ transcription factor | GO:0008150|biological_process;GO:0009938|negative regulation of gibberellic acid mediated signaling pathway;GO:0003674|molecular_function;GO:0010051|xylem and phloem pattern formation;GO:0005634|nucleus;GO:0045941|positive regulation of transcription;GO:0048479|style development;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010252|auxin homeostasis;GO:0048480|stigma development;GO:0046982|protein heterodimerization activity;GO:0005575|cellular_component | GhM_A01G1254.1,GhM_D01G1212.1,GhM_A05G2113.1,GhM_D05G2133.1,GhM_A06G0066.1,GhM_D06G0063.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75500 | nodulin MtN21 family protein | GO:0005886|plasma membrane | GhM_A01G1259.1,GhM_D01G1225.1,GhM_A05G2115.1,GhM_D05G2136.1,GhM_A06G0067.1,GhM_D06G0064.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75450 | CKX5, ATCKX5, ATCKX6; CKX5 (CYTOKININ OXIDASE 5); cytokinin dehydrogenase | GO:0009823|cytokinin catabolic process;GO:0019139|cytokinin dehydrogenase activity;GO:0005576|extracellular region | GhM_A01G1265.1,GhM_D01G1234.1,GhM_A05G2125.1,GhM_D05G2146.1,GhM_A06G0073.1,GhM_D06G0070.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G47250||AT5G42790 | PAF2; PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase||PAF1, ATPSM30; PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0046685|response to arsenic;GO:0030163|protein catabolic process;GO:0005886|plasma membrane;GO:0005839|proteasome core complex;GO:0000502|proteasome complex | GhM_A01G1273.1,GhM_D01G1239.1,GhM_A05G2893.1,GhM_D05G2902.1,GhM_A06G0095.1,GhM_D06G0092.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19580 | GAMMA CA1; GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase | GO:0005747|mitochondrial respiratory chain complex I;GO:0004089|carbonate dehydratase activity;GO:0005739|mitochondrion;GO:0009853|photorespiration;GO:0045271|respiratory chain complex I;GO:0031966|mitochondrial membrane | GhM_A01G1274.1,GhM_D01G1240.1,GhM_A02G2136.1,GhM_D03G0131.1,GhM_A11G2131.1,GhM_D11G2103.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G42970 | COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4; COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8); protein binding | GO:0005515|protein binding;GO:0000085|G2 phase of mitotic cell cycle;GO:0009640|photomorphogenesis;GO:0008180|signalosome;GO:0010388|cullin deneddylation;GO:0010100|negative regulation of photomorphogenesis | GhM_A01G1293.1,GhM_D01G1263.1,GhM_A03G1029.1,GhM_D02G1047.1,GhM_A05G2906.1,GhM_D05G2918.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G80950 | phospholipid/glycerol acyltransferase family protein | GO:0005634|nucleus;GO:0008152|metabolic process;GO:0008415|acyltransferase activity;GO:0005783|endoplasmic reticulum | GhM_A01G1302.1,GhM_D01G1267.1,GhM_A05G2907.1,GhM_D05G2919.1,GhM_A06G0120.1,GhM_D06G0118.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G42680 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1314.1,GhM_D01G1287.1,GhM_A03G1120.1,GhM_D02G1025.1,GhM_A05G2240.1,GhM_D05G2260.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G50070 | CYCD3;3; CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase | GO:0042127|regulation of cell proliferation;GO:0005634|nucleus;GO:0051726|regulation of cell cycle;GO:0004693|cyclin-dependent protein kinase activity | GhM_A01G1351.1,GhM_D01G1322.1,GhM_D02G0985.1,GhM_A02G0993.1,GhM_D05G2331.1,GhM_A05G2315.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G07400 | VFB3; VFB3 (VIER F-BOX PROTEINE 3); ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process | GhM_A01G1352.1,GhM_D01G1323.1,GhM_A05G2313.1,GhM_D05G2329.1,GhM_A06G0221.1,GhM_D06G0225.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G43060||AT1G47128 | cysteine proteinase, putative / thiol protease, putative||RD21, RD21A; RD21 (responsive to dehydration 21); cysteine-type endopeptidase/ cysteine-type peptidase | GO:0009507|chloroplast;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0005773|vacuole | GhM_A01G1353.1,GhM_D01G1324.1,GhM_A05G2308.1,GhM_D05G2324.1,GhM_A06G0219.1,GhM_D06G0223.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G46264 | AT-HSFB4, HSFB4; AT-HSFB4; DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0008356|asymmetric cell division;GO:0003677|DNA binding | GhM_A01G1370.1,GhM_D01G1344.1,GhM_A03G1084.1,GhM_D02G0997.1,GhM_A05G2286.1,GhM_D05G2304.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G49700||AT4G37770 | ETO3, ACS9; ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9); 1-aminocyclopropane-1-carboxylate synthase||ACS8; ACS8; 1-aminocyclopropane-1-carboxylate synthase | GO:0009693|ethylene biosynthetic process;GO:0005515|protein binding;GO:0006417|regulation of translation;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0005575|cellular_component | GhM_A01G1401.1,GhM_D01G1374.1,GhM_A05G2955.1,GhM_D05G2965.1,GhM_D05G2403.1,GhM_A05G2390.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27600 | glycosyl transferase family 43 protein | GO:0016020|membrane | GhM_A01G1415.1,GhM_D01G1386.1,GhM_A02G0945.1,GhM_D02G0937.1,GhM_A06G0304.1,GhM_D06G0317.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09920 | TRAF-type zinc finger-related | GO:0008150|biological_process;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G1422.1,GhM_D01G1397.1,GhM_A05G2441.1,GhM_D05G2451.1,GhM_A06G0324.1,GhM_D06G0337.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G34780 | ATAPRL4; ATAPRL4 (APR-like 4) | GO:0012505|endomembrane system;GO:0045454|cell redox homeostasis | GhM_A01G1442.1,GhM_D01G1419.1,GhM_A02G0909.1,GhM_D02G0904.1,GhM_A06G0401.1,GhM_D06G0405.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24580||AT1G12780||AT5G19390||AT5G12150 | UGE1; UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization||pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing protein||REN1; REN1 (ROP1 ENHANCER 1); Rho GTPase activator/ Rho GTPase binding / phosphoinositide binding | GO:0006950|response to stress;GO:0005100|Rho GTPase activator activity;GO:0048868|pollen tube development;GO:0009846|pollen germination;GO:0045177|apical part of cell;GO:0035091|phosphoinositide binding;GO:0032862|activation of Rho GTPase activity;GO:0005938|cell cortex;GO:0009865|pollen tube adhesion;GO:0003978|UDP-glucose 4-epimerase activity;GO:0007165|signal transduction;GO:0046983|protein dimerization activity;GO:0005829|cytosol;GO:0009535|chloroplast thylakoid membrane;GO:0035024|negative regulation of Rho protein signal transduction;GO:0005886|plasma membrane;GO:0017048|Rho GTPase binding;GO:0046369|galactose biosynthetic process | GhM_A01G1459.1,GhM_D01G1440.1,GhM_A07G1382.1,GhM_A02G0587.1,GhM_A07G2435.1,GhM_D02G0924.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G01710 | DNAJ heat shock N-terminal domain-containing protein | GO:0051082|unfolded protein binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A01G1464.1,GhM_D01G1436.1,GhM_A05G2461.1,GhM_D05G2473.1,GhM_A06G0347.1,GhM_D06G0359.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G66240 | ATX1, ATATX1; ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding | GO:0012505|endomembrane system;GO:0046872|metal ion binding;GO:0030001|metal ion transport | GhM_A01G1509.1,GhM_D01G1465.1,GhM_A05G4741.1,GhM_D04G0208.1,GhM_D10G2432.1,GhM_A10G2518.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G10550 | phosphatase/ protein tyrosine phosphatase | GO:0016311|dephosphorylation;GO:0016791|phosphatase activity;GO:0005575|cellular_component;GO:0004725|protein tyrosine phosphatase activity | GhM_A01G1513.1,GhM_A12G0962.1,GhM_D12G0824.1,GhM_D01G1461.1,GhM_D01G1460.1,GhM_D12G0823.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G03300 | DCL2, ATDCL2; DCL2 (DICER-LIKE 2); ATP binding / ATP-dependent helicase/ RNA binding / double-stranded RNA binding / helicase/ nucleic acid binding / ribonuclease III | GO:0003723|RNA binding;GO:0051607|defense response to virus;GO:0004525|ribonuclease III activity;GO:0003725|double-stranded RNA binding;GO:0010216|maintenance of DNA methylation;GO:0010267|production of ta-siRNAs involved in RNA interference;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A01G1530.1,GhM_D01G1444.1,GhM_A01G1531.1,GhM_D05G3997.1,GhM_A01G1532.1,GhM_A04G0370.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57670 | NTT; NTT (NO TRANSMITTING TRACT); nucleic acid binding / transcription factor/ zinc ion binding | GO:0009860|pollen tube growth;GO:0009507|chloroplast;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A01G1547.1,GhM_D01G1509.1,GhM_D03G0894.1,GhM_A02G1331.1,GhM_A09G1579.1,GhM_D09G1477.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G11820 | SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1; SYP121 (SYNTAXIN OF PLANTS 121); SNAP receptor/ protein anchor | GO:0009863|salicylic acid mediated signaling pathway;GO:0009620|response to fungus;GO:0006944|cellular membrane fusion;GO:0031201|SNARE complex;GO:0009737|response to abscisic acid stimulus;GO:0009867|jasmonic acid mediated signaling pathway;GO:0006612|protein targeting to membrane;GO:0010363|regulation of plant-type hypersensitive response;GO:0006886|intracellular protein transport;GO:0006952|defense response;GO:0031348|negative regulation of defense response;GO:0043495|protein anchor;GO:0051245|negative regulation of cellular defense response;GO:0005886|plasma membrane;GO:0050832|defense response to fungus;GO:0043069|negative regulation of programmed cell death;GO:0005484|SNAP receptor activity | GhM_A01G1557.1,GhM_D01G1517.1,GhM_A04G0597.1,GhM_D04G1141.1,GhM_A09G1683.1,GhM_D09G1585.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G17611 | ATRBL14; ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14); zinc ion binding | GO:0008150|biological_process | GhM_A01G1563.1,GhM_D08G2887.1,GhM_A01G1661.1,GhM_A10G2467.1,GhM_A06G0862.1,GhM_A08G2948.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06530 | ABC transporter family protein | GO:0005886|plasma membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | GhM_A01G1565.1,GhM_D01G1524.1,GhM_A01G2485.1,GhM_D01G2425.1,GhM_A09G1668.1,GhM_D09G1570.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06560 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1566.1,GhM_D01G1526.1,GhM_A09G1667.1,GhM_D09G1569.1,GhM_A01G2482.1,GhM_D01G2422.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64140 | RPS28; RPS28 (RIBOSOMAL PROTEIN S28); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A01G1568.1,GhM_A02G0050.1,GhM_A09G1657.1,GhM_D01G1528.1,GhM_D02G0058.1,GhM_D09G1555.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G22380||AT1G54330 | ANAC020; ANAC020 (Arabidopsis NAC domain containing protein 20); transcription factor||anac090; anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_A01G1610.1,GhM_D01G2477.1,GhM_A01G2548.1,GhM_D04G1184.1,GhM_A04G0737.1,GhM_D04G1185.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G52730 | ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein | GO:0008121|ubiquinol-cytochrome-c reductase activity;GO:0006122|mitochondrial electron transport, ubiquinol to cytochrome c;GO:0005740|mitochondrial envelope;GO:0005750|mitochondrial respiratory chain complex III;GO:0005739|mitochondrion;GO:0016020|membrane | GhM_A01G1618.1,GhM_D01G1586.1,GhM_A01G2566.1,GhM_D01G2500.1,GhM_A09G1754.1,GhM_D09G1648.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G52870 | calmodulin-binding family protein | GO:0008150|biological_process;GO:0005516|calmodulin binding;GO:0005575|cellular_component | GhM_A01G1622.1,GhM_D01G1590.1,GhM_A11G4040.1,GhM_A04G0776.1,GhM_D04G1284.1,GhM_D11G3935.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G37035 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1638.1,GhM_D01G1648.1,GhM_A04G0962.1,GhM_D04G1415.1,GhM_A09G1859.1,GhM_D09G1756.1 | 6 | 0 | Gossypium | Cotton | |||
| - | ATCG01100 | NDHA; NADH dehydrogenase ND1 | GO:0016020|membrane | GhM_A01G1646.1,GhM_A06G0670.1,GhM_A04G0700.1,GhM_D04G1148.1,GhM_D10G2746.1,GhM_D11G3921.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G60070 | binding / clathrin binding / protein binding / protein transporter | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0030117|membrane coat;GO:0030276|clathrin binding;GO:0044431|Golgi apparatus part;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005794|Golgi apparatus;GO:0015031|protein transport;GO:0030131|clathrin adaptor complex;GO:0008565|protein transporter activity | GhM_A01G1670.1,GhM_D01G1686.1,GhM_A03G1907.1,GhM_D02G1958.1,GhM_A12G0577.1,GhM_D12G0568.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G05010 | clathrin adaptor complexes medium subunit-related | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0006810|transport;GO:0006886|intracellular protein transport;GO:0016020|membrane | GhM_A01G1677.1,GhM_D01G1678.1,GhM_A11G2777.1,GhM_D11G2684.1,GhM_A12G0522.1,GhM_D12G0515.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09610||AT1G33800||AT4G09990 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1688.1,GhM_D01G1665.1,GhM_D05G3107.1,GhM_A05G3108.1,GhM_D13G1497.1,GhM_A13G1620.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G70370 | BURP domain-containing protein / polygalacturonase, putative | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004650|polygalacturonase activity | GhM_A01G1693.1,GhM_D01G1635.1,GhM_A03G1287.1,GhM_D02G1369.1,GhM_A03G1890.1,GhM_D02G1944.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G53180 | catalytic/ glutamate-ammonia ligase | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0004356|glutamate-ammonia ligase activity;GO:0006807|nitrogen compound metabolic process;GO:0006542|glutamine biosynthetic process;GO:0006499|N-terminal protein myristoylation;GO:0009399|nitrogen fixation | GhM_A01G1706.1,GhM_D01G1620.1,GhM_A04G0917.1,GhM_D04G1373.1,GhM_D01G1619.1,GhM_D01G1621.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G02040||AT2G05710 | aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative||ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2; PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter | GO:0046686|response to cadmium ion;GO:0015197|peptide transporter activity;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0006979|response to oxidative stress;GO:0005739|mitochondrion;GO:0015833|peptide transport;GO:0042939|tripeptide transport;GO:0005618|cell wall;GO:0005774|vacuolar membrane;GO:0005773|vacuole;GO:0009737|response to abscisic acid stimulus;GO:0042937|tripeptide transporter activity;GO:0009651|response to salt stress;GO:0042936|dipeptide transporter activity;GO:0042938|dipeptide transport;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0000325|plant-type vacuole;GO:0015334|high affinity oligopeptide transporter activity;GO:0003994|aconitate hydratase activity;GO:0005524|ATP binding | GhM_A01G1747.1,GhM_D01G1735.1,GhM_A04G1651.1,GhM_D04G2135.1,GhM_D02G0830.1,GhM_D03G1501.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73110||AT1G04100 | ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative||IAA10; IAA10; transcription factor | GO:0009507|chloroplast;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010200|response to chitin;GO:0005524|ATP binding;GO:0003700|transcription factor activity;GO:0016887|ATPase activity;GO:0009535|chloroplast thylakoid membrane | GhM_A01G1757.1,GhM_A06G2154.1,GhM_A06G0784.1,GhM_A03G2441.1,GhM_A11G2223.1,GhM_A11G3546.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G14890||AT2G01610 | enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor||invertase/pectin methylesterase inhibitor family protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0030599|pectinesterase activity | GhM_A01G1801.1,GhM_D01G1815.1,GhM_A03G1627.1,GhM_D02G1695.1,GhM_A12G1973.1,GhM_D12G1885.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19485 | transferase | GO:0008150|biological_process | GhM_A01G1802.1,GhM_A05G2970.1,GhM_D09G1318.1,GhM_A08G0148.1,GhM_D08G0137.1,GhM_A09G1404.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G01660 | PDLP6; PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6) | GO:0008150|biological_process;GO:0009506|plasmodesma;GO:0003674|molecular_function | GhM_A01G1825.1,GhM_D01G1787.1,GhM_A03G1610.1,GhM_D02G1683.1,GhM_A04G1864.1,GhM_D04G2335.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G14860 | atnudt18; atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18); hydrolase | GO:0008150|biological_process;GO:0016787|hydrolase activity | GhM_A01G1835.1,GhM_D01G1778.1,GhM_A03G1604.1,GhM_D02G1672.1,GhM_A12G1977.1,GhM_D12G1889.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G24620 | polcalcin, putative / calcium-binding pollen allergen, putative | GO:0005634|nucleus;GO:0009409|response to cold;GO:0005737|cytoplasm;GO:0005509|calcium ion binding | GhM_A01G1839.1,GhM_D01G1776.1,GhM_A12G1979.1,GhM_D12G1891.1,GhM_D02G1665.1,GhM_A03G1600.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G23040 | hydroxyproline-rich glycoprotein family protein | GO:0008150|biological_process;GO:0031225|anchored to membrane | GhM_A01G1884.1,GhM_D01G1856.1,GhM_A03G1658.1,GhM_D02G1720.1,GhM_A12G1965.1,GhM_D12G1877.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G01290 | ribose-5-phosphate isomerase | GO:0004751|ribose-5-phosphate isomerase activity;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0008219|cell death;GO:0005737|cytoplasm | GhM_A01G1899.1,GhM_D01G1874.1,GhM_A03G1678.1,GhM_D02G1732.1,GhM_A12G1961.1,GhM_D12G1873.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27310 | NTF2A; NTF2A (NUCLEAR TRANSPORT FACTOR 2A); Ran GTPase binding / protein transporter | GO:0005634|nucleus;GO:0005635|nuclear envelope;GO:0005737|cytoplasm;GO:0006913|nucleocytoplasmic transport;GO:0005622|intracellular;GO:0006606|protein import into nucleus;GO:0008536|Ran GTPase binding;GO:0008565|protein transporter activity | GhM_A01G1907.1,GhM_D01G1885.1,GhM_A03G1534.1,GhM_D02G1758.1,GhM_A05G3600.1,GhM_D05G3562.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27320 | AHK3; AHK3 (ARABIDOPSIS HISTIDINE KINASE 3); cytokinin receptor/ osmosensor/ protein histidine kinase | GO:0010271|regulation of chlorophyll catabolic process;GO:0010150|leaf senescence;GO:0005034|osmosensor activity;GO:0009736|cytokinin mediated signaling pathway;GO:0010029|regulation of seed germination;GO:0006970|response to osmotic stress;GO:0009651|response to salt stress;GO:0009884|cytokinin receptor activity;GO:0009414|response to water deprivation;GO:0004673|protein histidine kinase activity;GO:0005886|plasma membrane;GO:0048831|regulation of shoot development;GO:0042742|defense response to bacterium;GO:0009409|response to cold | GhM_A01G1909.1,GhM_D01G1887.1,GhM_A03G1532.1,GhM_D02G1760.1,GhM_A12G1950.1,GhM_D12G1865.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G13450 | DNA binding protein GT-1 | GO:0005634|nucleus | GhM_A01G1934.1,GhM_D01G1981.1,GhM_A05G3617.1,GhM_D05G3578.1,GhM_A12G1923.1,GhM_D12G1849.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G24510 | T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative | GO:0044267|cellular protein metabolic process;GO:0005886|plasma membrane;GO:0006457|protein folding;GO:0005515|protein binding | GhM_A01G1948.1,GhM_D01G1975.1,GhM_A05G3634.1,GhM_D05G3587.1,GhM_A12G1912.1,GhM_D12G1838.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G67900 | phototropic-responsive NPH3 family protein | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0004871|signal transducer activity | GhM_A01G1975.1,GhM_D01G1956.1,GhM_A03G1828.1,GhM_D02G1892.1,GhM_A12G1897.1,GhM_D12G1825.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G67410 | exostosin family protein | GO:0012505|endomembrane system | GhM_A01G1998.1,GhM_D01G1911.1,GhM_A03G1710.1,GhM_D02G1792.1,GhM_A05G3604.1,GhM_D05G3565.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57810 | OTU-like cysteine protease family protein | GO:0008150|biological_process | GhM_A01G2006.1,GhM_D01G1917.1,GhM_A03G1721.1,GhM_D02G1805.1,GhM_D09G1491.1,GhM_A09G1591.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G70480 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2013.1,GhM_D01G1924.1,GhM_A05G3674.1,GhM_D05G3631.1,GhM_D12G1807.1,GhM_A12G1876.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G67340 | zinc finger (MYND type) family protein / F-box family protein | GO:0008150|biological_process;GO:0005488|binding;GO:0008270|zinc ion binding;GO:0005634|nucleus | GhM_A01G2027.1,GhM_D01G1902.1,GhM_A03G1700.1,GhM_D02G1776.1,GhM_A12G1940.1,GhM_D12G1860.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G16700 | ADF5, ATADF5; ADF5 (ACTIN DEPOLYMERIZING FACTOR 5); actin binding | GO:0008150|biological_process;GO:0005622|intracellular;GO:0003779|actin binding | GhM_A01G2084.1,GhM_D01G2049.1,GhM_A03G2644.1,GhM_D02G2663.1,GhM_A12G0417.1,GhM_D12G0377.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G35000 | APX3; APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A01G2090.1,GhM_D01G2058.1,GhM_A02G2192.1,GhM_D03G0079.1,GhM_A03G2648.1,GhM_D02G2667.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G20200||AT1G75990 | 26S proteasome regulatory subunit S3, putative (RPN3)||EMB2719, HAP15; EMB2719 (EMBRYO DEFECTIVE 2719); enzyme regulator | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0030234|enzyme regulator activity;GO:0009793|embryonic development ending in seed dormancy;GO:0030163|protein catabolic process;GO:0008541|proteasome regulatory particle, lid subcomplex;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G2116.1,GhM_D01G2086.1,GhM_A03G2655.1,GhM_D12G0399.1,GhM_A12G0395.1,GhM_A12G0397.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G23590||AT5G03650 | DNAJ heat shock N-terminal domain-containing protein||SBE2.2; SBE2.2 (starch branching enzyme 2.2); 1,4-alpha-glucan branching enzyme | GO:0051082|unfolded protein binding;GO:0009507|chloroplast;GO:0005982|starch metabolic process;GO:0003844|1,4-alpha-glucan branching enzyme activity;GO:0010021|amylopectin biosynthetic process;GO:0009570|chloroplast stroma;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A01G2123.1,GhM_D01G2094.1,GhM_D02G0995.1,GhM_D12G1598.1,GhM_D12G1162.1,GhM_D10G2293.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G42210 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: tetracycline transporter (TAIR:AT2G16990.2); Has 985 Blast hits to 984 proteins in 348 species: Archae - 2; Bacteria - 541; Metazoa - 251; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink). | GO:0012505|endomembrane system | GhM_A01G2129.1,GhM_D01G2101.1,GhM_A03G2663.1,GhM_D02G2683.1,GhM_A12G0389.1,GhM_D12G0406.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G41990 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2146.1,GhM_D01G2119.1,GhM_A03G2672.1,GhM_D02G2692.1,GhM_A04G1639.1,GhM_D04G2123.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G38400||AT3G45970 | ATEXLA2, EXPL2, ATEXPL2, ATHEXP BETA 2.2; ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)||ATEXLA1, EXPL1, ATEXPL1, ATHEXP BETA 2.1; ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1) | GO:0012505|endomembrane system;GO:0009826|unidimensional cell growth;GO:0009505|plant-type cell wall;GO:0009664|plant-type cell wall organization;GO:0010583|response to cyclopentenone;GO:0009828|plant-type cell wall loosening;GO:0005576|extracellular region;GO:0005618|cell wall | GhM_A01G2151.1,GhM_D01G2124.1,GhM_A03G2688.1,GhM_D02G2708.1,GhM_A04G1641.1,GhM_D04G2124.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G35240 | unknown protein | GO:0005886|plasma membrane;GO:0006499|N-terminal protein myristoylation | GhM_A01G2168.1,GhM_D01G2135.1,GhM_A03G2696.1,GhM_D02G2714.1,GhM_A12G0366.1,GhM_D12G0429.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G17980 | ATSLY1; ATSLY1; protein transporter | GO:0009306|protein secretion;GO:0016192|vesicle-mediated transport;GO:0006904|vesicle docking during exocytosis;GO:0008565|protein transporter activity | GhM_A01G2176.1,GhM_A12G0362.1,GhM_A01G2178.1,GhM_D12G0433.1,GhM_D01G2142.1,GhM_D01G2144.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G25280||AT1G76900 | AtTLP10; AtTLP10 (TUBBY LIKE PROTEIN 10); phosphoric diester hydrolase/ transcription factor||AtTLP1; AtTLP1 (TUBBY LIKE PROTEIN 1); phosphoric diester hydrolase/ transcription factor | GO:0045449|regulation of transcription;GO:0008081|phosphoric diester hydrolase activity;GO:0003700|transcription factor activity;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A01G2189.1,GhM_D01G2154.1,GhM_A03G2711.1,GhM_D02G2729.1,GhM_A05G2732.1,GhM_D05G2731.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G68140 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 145 Blast hits to 136 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2198.1,GhM_D01G2165.1,GhM_A03G2716.1,GhM_D02G2734.1,GhM_A04G1663.1,GhM_D04G2147.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G49720 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A01G2247.1,GhM_D01G2206.1,GhM_A02G1940.1,GhM_D03G0328.1,GhM_A11G2517.1,GhM_D11G2374.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G65700 | BAM1; BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase | GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0048229|gametophyte development;GO:0010480|microsporocyte differentiation;GO:0048437|floral organ development;GO:0048653|anther development;GO:0009934|regulation of meristem structural organization;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0010075|regulation of meristem growth;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2301.1,GhM_D01G2255.1,GhM_A03G2782.1,GhM_D02G2789.1,GhM_D12G0482.1,GhM_A12G0487.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G77920||AT1G22070 | bZIP family transcription factor||TGA3; TGA3; DNA binding / calmodulin binding / protein binding / transcription factor | GO:0005515|protein binding;GO:0005634|nucleus;GO:0005516|calmodulin binding;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0042742|defense response to bacterium;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway | GhM_A01G2338.1,GhM_D01G2285.1,GhM_A02G0889.1,GhM_D02G0886.1,GhM_A06G0469.1,GhM_D06G0481.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G36980 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2343.1,GhM_A06G0480.1,GhM_A02G0886.1,GhM_D02G0883.1,GhM_D01G2291.1,GhM_D06G0497.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G08330 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A01G2360.1,GhM_D01G2304.1,GhM_A05G3023.1,GhM_D05G3026.1,GhM_A06G0521.1,GhM_D06G0530.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G21750 | ATPDIL1-1, ATPDI5, PDI5; ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0000327|lytic vacuole within protein storage vacuole;GO:0010043|response to zinc ion;GO:0048316|seed development;GO:0005783|endoplasmic reticulum;GO:0009579|thylakoid;GO:0043067|regulation of programmed cell death;GO:0009651|response to salt stress;GO:0000326|protein storage vacuole;GO:0009790|embryonic development;GO:0003756|protein disulfide isomerase activity;GO:0016020|membrane;GO:0005773|vacuole | GhM_A01G2365.1,GhM_D01G2311.1,GhM_A05G2637.1,GhM_D05G2652.1,GhM_A05G3026.1,GhM_D05G3028.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57950||AT5G06790 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A01G2400.1,GhM_D01G2343.1,GhM_A04G0657.1,GhM_D04G1087.1,GhM_A09G1612.1,GhM_D09G1509.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G41210||AT3G56960 | PIP5K5; PIP5K5 (PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5); 1-phosphatidylinositol-4-phosphate 5-kinase||PIP5K4; PIP5K4 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4); 1-phosphatidylinositol-4-phosphate 5-kinase | GO:0009860|pollen tube growth;GO:0009827|plant-type cell wall modification;GO:0016308|1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0009846|pollen germination;GO:0046488|phosphatidylinositol metabolic process;GO:0016324|apical plasma membrane;GO:0010118|stomatal movement;GO:0006897|endocytosis;GO:0005886|plasma membrane;GO:0044445|cytosolic part;GO:0007164|establishment of tissue polarity | GhM_A01G2411.1,GhM_D01G2352.1,GhM_A02G1333.1,GhM_D03G0708.1,GhM_A13G0027.1,GhM_D13G0028.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57800 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus | GhM_A01G2441.1,GhM_D01G2377.1,GhM_A09G1589.1,GhM_D09G1489.1,GhM_A11G3944.1,GhM_D11G3853.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G51200 | zinc finger (AN1-like) family protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G2442.1,GhM_D01G2378.1,GhM_A09G1583.1,GhM_D09G1483.1,GhM_A11G3909.1,GhM_D11G3830.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G58560 | endonuclease/exonuclease/phosphatase family protein | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_A01G2471.1,GhM_D01G2409.1,GhM_A04G0630.1,GhM_D04G1168.1,GhM_A09G1639.1,GhM_D09G1540.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G35940 | BLH1, EDA29; BLH1 (BEL1-LIKE HOMEODOMAIN 1); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0042803|protein homodimerization activity;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010201|response to continuous far red light stimulus by the high-irradiance response system;GO:0046982|protein heterodimerization activity;GO:0010197|polar nucleus fusion;GO:0009610|response to symbiotic fungus | GhM_A01G2503.1,GhM_D01G2440.1,GhM_A09G1689.1,GhM_A04G0725.1,GhM_D04G1127.1,GhM_D09G1592.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G2514.1,GhM_A08G2172.1,GhM_A13G2177.1,GhM_A13G0570.1,GhM_A13G1934.1,GhM_D07G2221.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G36026 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF623, plant (InterPro:IPR006458); BEST Arabidopsis thaliana protein match is: OFP6 (OVATE FAMILY PROTEIN 6) (TAIR:AT3G52525.1); Has 230 Blast hits to 230 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2522.1,GhM_D01G2456.1,GhM_A04G0821.1,GhM_D04G1112.1,GhM_A09G1709.1,GhM_D09G1610.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G23930||AT3G11500 | SNRNP-G; SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)||small nuclear ribonucleoprotein G, putative / snRNP-G, putative / Sm protein G, putative | GO:0005634|nucleus;GO:0005730|nucleolus;GO:0005732|small nucleolar ribonucleoprotein complex;GO:0003674|molecular_function | GhM_A01G2555.1,GhM_D01G2488.1,GhM_A04G0817.1,GhM_D04G1232.1,GhM_A09G1762.1,GhM_D09G1640.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G36220||AT3G52710 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0009061|anaerobic respiration | GhM_A01G2562.1,GhM_D01G2496.1,GhM_A04G0810.1,GhM_D04G1238.1,GhM_A09G1756.1,GhM_D09G1646.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G27690 | CYP94C1; CYP94C1; fatty acid (omega-1)-hydroxylase/ oxygen binding | GO:0008393|fatty acid (omega-1)-hydroxylase activity;GO:0005792|microsome;GO:0019825|oxygen binding | GhM_A01G2583.1,GhM_D01G2512.1,GhM_A04G0779.1,GhM_D04G1281.1,GhM_A09G1742.1,GhM_D09G1659.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G52880||AT5G03630 | ATMDAR1; monodehydroascorbate reductase, putative||ATMDAR2; ATMDAR2; monodehydroascorbate reductase (NADH) | GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0010043|response to zinc ion;GO:0005782|peroxisomal matrix;GO:0046686|response to cadmium ion;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0042744|hydrogen peroxide catabolic process;GO:0018119|peptidyl-cysteine S-nitrosylation;GO:0005886|plasma membrane;GO:0016656|monodehydroascorbate reductase (NADH) activity | GhM_A01G2586.1,GhM_D01G2515.1,GhM_A09G1738.1,GhM_D09G1663.1,GhM_A13G1937.1,GhM_D13G1832.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G28260 | ATCNGC15, CNGC15; ATCNGC15; calmodulin binding / cation channel/ cyclic nucleotide binding | GO:0030551|cyclic nucleotide binding;GO:0006811|ion transport;GO:0005261|cation channel activity;GO:0005516|calmodulin binding;GO:0006813|potassium ion transport;GO:0016020|membrane | GhM_A01G2658.1,GhM_D01G2587.1,GhM_A03G0457.1,GhM_D03G1672.1,GhM_A05G1151.1,GhM_D05G1168.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G53400 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: CPUORF47 (CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 47) (TAIR:AT5G03190.1); Has 120 Blast hits to 120 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2661.1,GhM_Scaf001G018.1,GhM_A13G0283.1,GhM_D13G0269.1,GhM_D13G0270.1,GhM_D01G2591.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G53370 | DNA-binding S1FA family protein | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A01G2669.1,GhM_D01G2598.1,GhM_A04G0993.1,GhM_D04G1446.1,GhM_A09G1888.1,GhM_D09G1784.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G37860||AT5G22790 | LCD1; LCD1 (LOWER CELL DENSITY 1)||RER1; RER1 (RETICULATA-RELATED 1) | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0048366|leaf development;GO:0016020|membrane | GhM_A01G2735.1,GhM_D01G2663.1,GhM_A13G2870.1,GhM_A09G1224.1,GhM_D09G1155.1,GhM_D13G2771.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G02310 | PRT6; PRT6 (PROTEOLYSIS 6); ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009737|response to abscisic acid stimulus;GO:0010029|regulation of seed germination;GO:0004842|ubiquitin-protein ligase activity;GO:0050994|regulation of lipid catabolic process | GhM_A01G2751.1,GhM_D01G2678.1,GhM_A09G1936.1,GhM_D09G1835.1,GhM_A13G1315.1,GhM_D13G1194.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G2752.1,GhM_D01G2679.1,GhM_A04G1077.1,GhM_D04G1538.1,GhM_A11G4098.1,GhM_D11G3993.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G54040 | photoassimilate-responsive protein-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G2767.1,GhM_D01G2694.1,GhM_A11G4118.1,GhM_D11G4008.1,GhM_A13G1155.1,GhM_D13G1102.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38010||AT1G07380 | ceramidase family protein | GO:0012505|endomembrane system;GO:0005886|plasma membrane;GO:0008150|biological_process;GO:0017040|ceramidase activity | GhM_A01G2778.1,GhM_D01G2702.1,GhM_A03G0657.1,GhM_D03G1450.1,GhM_A05G0999.1,GhM_D05G1016.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G08910||AT5G01390||AT2G20560 | DNAJ heat shock family protein||DNAJ heat shock protein, putative | GO:0051082|unfolded protein binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A01G2809.1,GhM_D01G2733.1,GhM_A04G1182.1,GhM_D04G1658.1,GhM_A05G1789.1,GhM_D05G1804.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G01410 | PDX1, ATPDX1.3, RSR4, PDX1.3, ATPDX1; RSR4 (REDUCED SUGAR RESPONSE 4); protein heterodimerization/ protein homodimerization | GO:0006950|response to stress;GO:0006982|response to lipid hydroperoxide;GO:0006979|response to oxidative stress;GO:0012505|endomembrane system;GO:0006520|cellular amino acid metabolic process;GO:0008615|pyridoxine biosynthetic process;GO:0042803|protein homodimerization activity;GO:0009651|response to salt stress;GO:0042538|hyperosmotic salinity response;GO:0005829|cytosol;GO:0042819|vitamin B6 biosynthetic process;GO:0015994|chlorophyll metabolic process;GO:0010335|response to non-ionic osmotic stress;GO:0046982|protein heterodimerization activity;GO:0005886|plasma membrane;GO:0010224|response to UV-B;GO:0009646|response to absence of light | GhM_A01G2811.1,GhM_D01G2735.1,GhM_A04G1181.1,GhM_D04G1657.1,GhM_A09G2038.1,GhM_D09G1941.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G01530||AT2G40100 | LHCB4.3; LHCB4.3 (light harvesting complex PSII); chlorophyll binding||chlorophyll A-B binding protein CP29 (LHCB4) | GO:0009507|chloroplast;GO:0016168|chlorophyll binding;GO:0010114|response to red light;GO:0010218|response to far red light;GO:0009579|thylakoid;GO:0009637|response to blue light;GO:0030076|light-harvesting complex;GO:0010287|plastoglobule;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0015979|photosynthesis | GhM_A01G2817.1,GhM_D01G2740.1,GhM_A06G2148.1,GhM_D06G2123.1,GhM_A10G2945.1,GhM_D10G2906.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38290 | ATAMT2, AMT2;1; ATAMT2 (AMMONIUM TRANSPORTER 2); ammonium transmembrane transporter/ high affinity secondary active ammonium transmembrane transporter | GO:0009624|response to nematode;GO:0015696|ammonium transport;GO:0015398|high affinity secondary active ammonium transmembrane transporter activity;GO:0005886|plasma membrane;GO:0008519|ammonium transmembrane transporter activity | GhM_A01G2827.1,GhM_D01G2751.1,GhM_A04G1221.1,GhM_D04G1703.1,GhM_A10G1937.1,GhM_D10G1208.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38330 | MATE efflux family protein | GO:0015297|antiporter activity;GO:0009507|chloroplast;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A01G2838.1,GhM_A09G1387.1,GhM_A12G2597.1,GhM_D01G2763.1,GhM_D05G3706.1,GhM_D12G0741.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38360 | PRA1.B4; PRA1.B4 (PRENYLATED RAB ACCEPTOR 1.B4) | GO:0016192|vesicle-mediated transport;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A01G2840.1,GhM_D01G2765.1,GhM_A09G2067.1,GhM_D09G1972.1,GhM_A11G0367.1,GhM_D11G0352.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38610 | KH domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A02G0013.1,GhM_D02G0022.1,GhM_A05G3726.1,GhM_D05G3804.1,GhM_A10G1901.1,GhM_D10G1244.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G08560||AT4G11150 | TUF, emb2448, TUFF, VHA-E1; TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1); proton-transporting ATPase, rotational mechanism||VHA-E2; VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2); hydrogen-exporting ATPase, phosphorylative mechanism / proton-transporting ATPase, rotational mechanism | GO:0022626|cytosolic ribosome;GO:0005753|mitochondrial proton-transporting ATP synthase complex;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0009793|embryonic development ending in seed dormancy;GO:0005886|plasma membrane;GO:0000325|plant-type vacuole;GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism;GO:0009651|response to salt stress;GO:0009832|plant-type cell wall biogenesis;GO:0015986|ATP synthesis coupled proton transport;GO:0009705|plant-type vacuole membrane;GO:0005774|vacuolar membrane;GO:0042742|defense response to bacterium;GO:0007030|Golgi organization;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A02G0020.1,GhM_D02G0030.1,GhM_A12G2859.1,GhM_A08G1576.1,GhM_D08G1525.1,GhM_D12G2748.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38560 | TFIIS; TFIIS (TRANSCRIPT ELONGATION FACTOR IIS); DNA binding / RNA polymerase II transcription elongation factor/ transcription factor | GO:0005634|nucleus;GO:0006354|RNA elongation;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0016944|RNA polymerase II transcription elongation factor activity;GO:0003700|transcription factor activity;GO:0009910|negative regulation of flower development;GO:0010162|seed dormancy | GhM_A02G0028.1,GhM_D02G0038.1,GhM_D09G2498.1,GhM_A09G2617.1,GhM_D10G1233.1,GhM_A10G1914.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G08760 | ATSIK; ATSIK; ATP binding / kinase/ protein kinase/ protein tyrosine kinase | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A02G0037.1,GhM_D02G0046.1,GhM_A09G2612.1,GhM_D09G2494.1,GhM_A10G1875.1,GhM_D10G1268.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G10960 | xanthine/uracil permease family protein | GO:0022857|transmembrane transporter activity;GO:0016020|membrane;GO:0006863|purine transport;GO:0005345|purine transmembrane transporter activity | GhM_A02G0047.1,GhM_D02G0056.1,GhM_A05G4760.1,GhM_D04G0168.1,GhM_A10G2281.1,GhM_D10G2205.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G08860 | alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative | GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0005739|mitochondrion;GO:0008453|alanine-glyoxylate transaminase activity;GO:0043562|cellular response to nitrogen levels;GO:0008483|transaminase activity | GhM_A02G0058.1,GhM_D02G0065.1,GhM_A09G2602.1,GhM_D09G2481.1,GhM_A10G1844.1,GhM_D10G1292.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G31800||AT2G43850 | ankyrin protein kinase, putative||ankyrin protein kinase, putative (APK1) | GO:0009507|chloroplast;GO:0009966|regulation of signal transduction;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0016301|kinase activity | GhM_A02G0067.1,GhM_D02G0074.1,GhM_A09G2600.1,GhM_D09G2478.1,GhM_A10G1830.1,GhM_D10G1302.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G16250 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0075.1,GhM_D02G0084.1,GhM_A09G2595.1,GhM_D09G2473.1,GhM_A10G1802.1,GhM_D10G1332.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24280 | cpHsc70-1; cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009532|plastid stroma;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0006457|protein folding;GO:0005524|ATP binding;GO:0009409|response to cold | GhM_A02G0078.1,GhM_D02G0087.1,GhM_A09G2596.1,GhM_D09G2474.1,GhM_A10G1806.1,GhM_D10G1328.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G08590||AT1G09780 | 2,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putative | GO:0046537|2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005740|mitochondrial envelope;GO:0046686|response to cadmium ion;GO:0030145|manganese ion binding;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0005829|cytosol;GO:0004619|phosphoglycerate mutase activity;GO:0046872|metal ion binding;GO:0009409|response to cold | GhM_A02G0111.1,GhM_D02G0113.1,GhM_A02G1036.1,GhM_D02G1236.1,GhM_A10G1762.1,GhM_D10G1371.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G43500 | RWP-RK domain-containing protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A02G0113.1,GhM_D02G0115.1,GhM_A02G1043.1,GhM_D02G1266.1,GhM_A10G1759.1,GhM_D10G1374.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G06130 | GLX2-4; GLX2-4 (glyoxalase 2-4); hydrolase/ hydroxyacylglutathione hydrolase/ zinc ion binding | GO:0009507|chloroplast;GO:0016787|hydrolase activity;GO:0019243|methylglyoxal catabolic process to D-lactate;GO:0004416|hydroxyacylglutathione hydrolase activity;GO:0008270|zinc ion binding | GhM_A02G0126.1,GhM_D02G0131.1,GhM_A09G2564.1,GhM_D09G2444.1,GhM_A10G1747.1,GhM_D10G1386.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G31660 | SAD2, URM9; SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2); binding / protein transporter | GO:0005488|binding;GO:0005643|nuclear pore;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0000059|protein import into nucleus, docking;GO:0006606|protein import into nucleus;GO:0008565|protein transporter activity | GhM_A02G0142.1,GhM_D02G0147.1,GhM_A09G2548.1,GhM_D09G2430.1,GhM_A10G1694.1,GhM_D10G1429.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G05800 | DGL; DGL (DONGLE); triacylglycerol lipase | GO:0009695|jasmonic acid biosynthetic process;GO:0008970|phospholipase A1 activity;GO:0009507|chloroplast;GO:0004806|triglyceride lipase activity;GO:0009611|response to wounding;GO:0006629|lipid metabolic process;GO:0030308|negative regulation of cell growth;GO:0050832|defense response to fungus;GO:0047714|galactolipase activity | GhM_A02G0144.1,GhM_D02G0149.1,GhM_A09G2547.1,GhM_D09G2428.1,GhM_A10G1686.1,GhM_D10G1436.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G43320 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G0164.1,GhM_D02G0169.1,GhM_A10G1664.1,GhM_D10G1457.1,GhM_A11G2931.1,GhM_D11G2871.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G23750 | leucine-rich repeat family protein / protein kinase family protein | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0208.1,GhM_D02G0209.1,GhM_A10G1589.1,GhM_D10G1523.1,GhM_D09G2395.1,GhM_A09G2512.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G24120 | myb family transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A02G0277.1,GhM_D10G1602.1,GhM_A09G2485.1,GhM_A10G1517.1,GhM_D02G0300.1,GhM_D09G2370.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G04780 | ankyrin repeat family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A02G0286.1,GhM_D02G0311.1,GhM_A09G2462.1,GhM_D09G2351.1,GhM_A10G1486.1,GhM_D10G1629.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G23580||AT3G27060 | RNR2, RNR2A; RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase||TSO2; TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding | GO:0051726|regulation of cell cycle;GO:0005971|ribonucleoside-diphosphate reductase complex;GO:0007275|multicellular organismal development;GO:0012501|programmed cell death;GO:0006281|DNA repair;GO:0006260|DNA replication;GO:0004748|ribonucleoside-diphosphate reductase activity;GO:0016491|oxidoreductase activity;GO:0009186|deoxyribonucleoside diphosphate metabolic process;GO:0046914|transition metal ion binding;GO:0005575|cellular_component;GO:0009259|ribonucleotide metabolic process | GhM_A02G0320.1,GhM_D02G0342.1,GhM_A07G2929.1,GhM_D07G2828.1,GhM_A10G0798.1,GhM_D10G0843.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19140 | ATAILP1, AILP1; AILP1 | GO:0005886|plasma membrane;GO:0009733|response to auxin stimulus;GO:0010044|response to aluminum ion;GO:0003674|molecular_function | GhM_A02G0325.1,GhM_D02G0347.1,GhM_A08G0866.1,GhM_D08G0818.1,GhM_A09G0797.1,GhM_D09G0738.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G54830 | NF-YC3; NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor | GO:0005622|intracellular | GhM_A02G0326.1,GhM_D02G0348.1,GhM_A08G2715.1,GhM_D08G2654.1,GhM_A11G3310.1,GhM_D11G3232.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19330 | armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein | GO:0005515|protein binding;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0010187|negative regulation of seed germination | GhM_A02G0333.1,GhM_D02G0354.1,GhM_A09G2631.1,GhM_D09G2512.1,GhM_A12G0050.1,GhM_D12G0051.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G14950 | unknown protein | GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A02G0334.1,GhM_D02G0355.1,GhM_A09G2640.1,GhM_D09G2521.1,GhM_A10G1380.1,GhM_D10G1736.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G03130||AT4G02770 | PSAD-2; PSAD-2 (photosystem I subunit D-2)||PSAD-1; PSAD-1 (photosystem I subunit D-1) | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009538|photosystem I reaction center;GO:0009579|thylakoid;GO:0010287|plastoglobule;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0015979|photosynthesis | GhM_A02G0339.1,GhM_D02G0360.1,GhM_A08G0836.1,GhM_D08G0794.1,GhM_A12G0047.1,GhM_D12G0047.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G0341.1,GhM_D02G0362.1,GhM_A09G2647.1,GhM_D09G2529.1,GhM_A11G3204.1,GhM_D11G3123.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G23000 | CIPK7, SnRK3.10, PKS7, ATSRPK1, ATSR2; CIPK7 (CBL-INTERACTING PROTEIN KINASE 7); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0016301|kinase activity;GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0381.1,GhM_D02G0400.1,GhM_A09G2717.1,GhM_D09G2596.1,GhM_A10G1448.1,GhM_D10G1675.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73770 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A02G0390.1,GhM_A12G0736.1,GhM_A02G1379.1,GhM_A12G1212.1,GhM_A06G2163.1,GhM_D06G1306.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73430 | sec34-like family protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0005801|cis-Golgi network;GO:0006886|intracellular protein transport;GO:0016020|membrane | GhM_A02G0399.1,GhM_D05G4259.1,GhM_A09G2934.1,GhM_A12G2422.1,GhM_D02G1158.1,GhM_D03G1142.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G04430 | dehydration-responsive protein-related | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005794|Golgi apparatus | GhM_A02G0446.1,GhM_D02G0442.1,GhM_A07G1848.1,GhM_D07G1809.1,GhM_A10G1308.1,GhM_D10G1811.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G43960 | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | GO:0003723|RNA binding;GO:0006810|transport;GO:0000166|nucleotide binding;GO:0006913|nucleocytoplasmic transport;GO:0005622|intracellular;GO:0003676|nucleic acid binding | GhM_A02G0482.1,GhM_D02G0477.1,GhM_A10G1252.1,GhM_D10G1867.1,GhM_A10G1253.1,GhM_D10G1866.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G13480||AT3G24310 | MYB305, ATMYB71; MYB305 (myb domain protein 305); DNA binding / transcription factor||AtMYB79; AtMYB79 (myb domain protein 79); DNA binding / transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A02G0492.1,GhM_D02G0486.1,GhM_A09G2814.1,GhM_A09G0853.1,GhM_D09G2687.1,GhM_D09G0794.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24030 | SLAH3; SLAH3 (SLAC1 HOMOLOGUE 3); transporter | GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0016021|integral to membrane;GO:0006873|cellular ion homeostasis | GhM_A02G0500.1,GhM_D02G0491.1,GhM_A08G1294.1,GhM_D08G1299.1,GhM_A11G0149.1,GhM_D11G0145.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G15470 | EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: glutamate binding (TAIR:AT1G03070.1); Has 4000 Blast hits to 3999 proteins in 955 species: Archae - 0; Bacteria - 1775; Metazoa - 750; Fungi - 92; Plants - 143; Viruses - 77; Other Eukaryotes - 1163 (source: NCBI BLink). | - | GhM_A02G0502.1,GhM_D02G0493.1,GhM_A09G0860.1,GhM_D09G0801.1,GhM_A10G1236.1,GhM_D10G1884.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G18930 | BUD2, SAMDC4; BUD2 (BUSHY AND DWARF 2); adenosylmethionine decarboxylase | GO:0008295|spermidine biosynthetic process;GO:0006596|polyamine biosynthetic process;GO:0004014|adenosylmethionine decarboxylase activity;GO:0005575|cellular_component;GO:0006597|spermine biosynthetic process | GhM_A02G0504.1,GhM_D02G0495.1,GhM_A09G2828.1,GhM_D09G2704.1,GhM_A10G1232.1,GhM_D10G1887.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G06270 | protein phosphatase 2C, putative / PP2C, putative | GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A02G0505.1,GhM_D02G0496.1,GhM_A09G2829.1,GhM_D09G2705.1,GhM_A10G1229.1,GhM_D10G1888.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09020 | SNF4, ATSNF4; SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator | GO:0030295|protein kinase activator activity;GO:0042149|cellular response to glucose starvation | GhM_A02G0545.1,GhM_D02G0531.1,GhM_A09G2921.1,GhM_D09G2784.1,GhM_A10G2040.1,GhM_D10G1978.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G06680||AT3G06700 | 60S ribosomal protein L29 (RPL29A)||60S ribosomal protein L29 (RPL29B) | GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A02G0608.1,GhM_D02G0601.1,GhM_A09G2868.1,GhM_A10G2154.1,GhM_D07G2285.1,GhM_D07G1802.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G06670 | binding | GO:0005488|binding | GhM_A02G0609.1,GhM_D02G0603.1,GhM_A09G2865.1,GhM_D09G2739.1,GhM_A10G2157.1,GhM_D10G2090.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G22710 | SUC2, SUT1, ATSUC2; SUC2 (SUCROSE-PROTON SYMPORTER 2); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | GO:0015144|carbohydrate transmembrane transporter activity;GO:0009915|phloem loading;GO:0008515|sucrose transmembrane transporter activity;GO:0008506|sucrose:hydrogen symporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity | GhM_A02G0619.1,GhM_D02G0613.1,GhM_A02G0705.1,GhM_D02G0703.1,GhM_A13G1659.1,GhM_D13G1539.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G17090 | protein phosphatase 2C family protein / PP2C family protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0006470|protein amino acid dephosphorylation;GO:0008287|protein serine/threonine phosphatase complex;GO:0004722|protein serine/threonine phosphatase activity | GhM_A02G0625.1,GhM_D02G0618.1,GhM_A09G2849.1,GhM_D09G2724.1,GhM_A10G2180.1,GhM_D10G2108.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G38470||AT2G17700||AT4G35780 | protein kinase family protein | GO:0008152|metabolic process;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0005829|cytosol | GhM_A02G0756.1,GhM_D02G0752.1,GhM_A05G2722.1,GhM_D05G2722.1,GhM_A05G2723.1,GhM_D10G2521.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G43670 | fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putative | GO:0042578|phosphoric ester hydrolase activity;GO:0042132|fructose 1,6-bisphosphate 1-phosphatase activity;GO:0005975|carbohydrate metabolic process;GO:0006000|fructose metabolic process;GO:0005575|cellular_component | GhM_A02G0760.1,GhM_D02G0757.1,GhM_A02G1359.1,GhM_D03G0785.1,GhM_A04G1654.1,GhM_D04G2139.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G77000||AT1G21410 | SKP2A; SKP2A||ATSKP2;2, SKP2B; SKP2B; ubiquitin-protein ligase | GO:0051603|proteolysis involved in cellular protein catabolic process;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0031146|SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0004842|ubiquitin-protein ligase activity;GO:0051781|positive regulation of cell division;GO:0005575|cellular_component;GO:0010286|heat acclimation | GhM_A02G0804.1,GhM_D02G0797.1,GhM_A02G1410.1,GhM_D03G0733.1,GhM_A05G2696.1,GhM_D05G2702.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G21720 | PBC1; PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0005886|plasma membrane;GO:0005839|proteasome core complex;GO:0006511|ubiquitin-dependent protein catabolic process | GhM_A02G0855.1,GhM_D02G0845.1,GhM_A05G3027.1,GhM_D05G3029.1,GhM_A06G0539.1,GhM_D06G0547.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G22030 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0888.1,GhM_D02G0885.1,GhM_A05G2584.1,GhM_D05G2596.1,GhM_A06G0471.1,GhM_D06G0483.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G34630 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0907.1,GhM_A06G0405.1,GhM_A05G2541.1,GhM_D05G2550.1,GhM_D02G0902.1,GhM_D06G0410.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G10810 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A02G0965.1,GhM_D02G0960.1,GhM_A06G0265.1,GhM_D06G0265.1,GhM_D05G2393.1,GhM_A05G2380.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27760 | SAT32, ATSAT32; interferon-related developmental regulator family protein / IFRD protein family | GO:0005488|binding;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0005737|cytoplasm | GhM_A02G0976.1,GhM_D02G0967.1,GhM_A05G2356.1,GhM_D05G2369.1,GhM_A05G2949.1,GhM_D05G2958.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24220 | VEP1, AWI31; VEP1 (VEIN PATTERNING 1); binding / catalytic | GO:0003824|catalytic activity;GO:0010051|xylem and phloem pattern formation;GO:0005488|binding;GO:0009611|response to wounding;GO:0005575|cellular_component | GhM_A02G0983.1,GhM_D02G0975.1,GhM_A05G2338.1,GhM_D05G2352.1,GhM_A13G2614.1,GhM_D13G2513.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G0989.1,GhM_D02G0982.1,GhM_D08G0933.1,GhM_D03G1451.1,GhM_D08G2020.1,GhM_D08G1112.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G18840||AT4G30260 | integral membrane Yip1 family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1005.1,GhM_D02G1220.1,GhM_A05G1256.1,GhM_D05G1274.1,GhM_A10G0047.1,GhM_D10G0035.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G11710 | ATKRS-1; ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | GO:0006418|tRNA aminoacylation for protein translation;GO:0006412|translation;GO:0005737|cytoplasm | GhM_A02G1026.1,GhM_D02G1248.1,GhM_A09G2045.1,GhM_D09G1949.1,GhM_A10G1776.1,GhM_D10G1357.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G43490 | RAB GTPase activator | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity | GhM_A02G1045.1,GhM_D02G1267.1,GhM_A10G1758.1,GhM_A02G1046.1,GhM_D10G1375.1,GhM_D02G1268.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G20460 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1078.1,GhM_D02G1111.1,GhM_A05G2030.1,GhM_D05G2044.1,GhM_A05G2852.1,GhM_D05G2854.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G10390 | nucleoporin family protein | GO:0005643|nuclear pore;GO:0009507|chloroplast;GO:0005215|transporter activity;GO:0006810|transport | GhM_A02G1149.1,GhM_D03G1075.1,GhM_A11G0195.1,GhM_A08G1482.1,GhM_D08G1373.1,GhM_D11G0194.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46800 | ZAT, ATMTP1, MTP1, ZAT1, ATCDF1; ZAT (ZINC TRANSPORTER OF ARABIDOPSIS THALIANA); inorganic anion transmembrane transporter/ metal ion transmembrane transporter/ zinc ion transmembrane transporter | GO:0005385|zinc ion transmembrane transporter activity;GO:0015103|inorganic anion transmembrane transporter activity;GO:0010038|response to metal ion;GO:0006882|cellular zinc ion homeostasis;GO:0006829|zinc ion transport;GO:0046873|metal ion transmembrane transporter activity;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0005773|vacuole | GhM_A02G1158.1,GhM_A08G1472.1,GhM_D08G1384.1,GhM_A12G1534.1,GhM_D12G1482.1,GhM_D03G1067.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24020 | NLP7; NLP7 (NIN LIKE PROTEIN 7); transcription factor | GO:0005634|nucleus;GO:0010167|response to nitrate;GO:0042128|nitrate assimilation;GO:0010118|stomatal movement;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation | GhM_A02G1161.1,GhM_D03G1062.1,GhM_A08G1433.1,GhM_D08G1419.1,GhM_A09G2298.1,GhM_D09G2201.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G10850 | nodulin MtN3 family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A02G1162.1,GhM_D03G1061.1,GhM_A08G1432.1,GhM_D08G1418.1,GhM_A12G2944.1,GhM_D12G2832.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1168.1,GhM_A08G1279.1,GhM_A06G1265.1,GhM_A12G0820.1,GhM_A03G1103.1,GhM_A06G1434.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G41990||AT3G18750 | WNK8, ATWNK8; WNK8 (WITH NO LYSINE (K) KINASE 8); kinase/ protein kinase||WNK6, ZIK5, ATWNK6; WNK6 (WITH NO K (=LYSINE) 6); kinase/ protein kinase | GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0005634|nucleus;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0005575|cellular_component;GO:0048573|photoperiodism, flowering | GhM_A02G1189.1,GhM_D03G1048.1,GhM_A12G2952.1,GhM_D12G2840.1,GhM_D08G1644.1,GhM_A08G1696.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24120||AT5G53550 | YSL1, ATYSL1; YSL1 (YELLOW STRIPE LIKE 1); oligopeptide transporter||YSL3, ATYSL3; YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter | GO:0006857|oligopeptide transport;GO:0015198|oligopeptide transporter activity;GO:0010039|response to iron ion;GO:0009624|response to nematode | GhM_A02G1193.1,GhM_D03G1033.1,GhM_A03G0695.1,GhM_D03G1415.1,GhM_A09G2260.1,GhM_D09G2166.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G61880 | CYP78A9; CYP78A9 (CYTOCHROME P450 78A9); monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0019825|oxygen binding;GO:0010154|fruit development;GO:0004497|monooxygenase activity | GhM_A02G1197.1,GhM_D03G1029.1,GhM_A08G1455.1,GhM_D08G1399.1,GhM_A12G2965.1,GhM_D12G2852.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46770||AT1G32770 | ANAC012, SND1, NST3; ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12); specific transcriptional repressor/ transcription activator/ transcription factor||NST1, EMB2301, ANAC043; EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | GO:0009834|secondary cell wall biogenesis;GO:0009901|anther dehiscence;GO:0016563|transcription activator activity;GO:0007275|multicellular organismal development;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0016566|specific transcriptional repressor activity;GO:0003700|transcription factor activity;GO:0009809|lignin biosynthetic process;GO:0010047|fruit dehiscence;GO:0005575|cellular_component | GhM_A02G1210.1,GhM_D03G1020.1,GhM_A08G1461.1,GhM_D08G1394.1,GhM_A12G2975.1,GhM_D12G2862.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G10925 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1219.1,GhM_D03G1012.1,GhM_A09G2305.1,GhM_D09G2204.1,GhM_A12G2938.1,GhM_D12G2826.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46500 | phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein | GO:0006464|protein modification process | GhM_A02G1223.1,GhM_D03G1010.1,GhM_A08G1442.1,GhM_D08G1427.1,GhM_A12G2935.1,GhM_D12G2822.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G41810 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1259.1,GhM_D03G0984.1,GhM_A12G2907.1,GhM_A08G1389.1,GhM_D08G1465.1,GhM_D12G2796.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G23750 | CRF2; CRF2 (CYTOKININ RESPONSE FACTOR 2); DNA binding / transcription factor | GO:0048364|root development;GO:0005515|protein binding;GO:0005634|nucleus;GO:0048825|cotyledon development;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0042991|transcription factor import into nucleus | GhM_A02G1268.1,GhM_D03G0971.1,GhM_D12G2789.1,GhM_A09G2319.1,GhM_D09G2221.1,GhM_A12G2899.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G60750 | CAAX amino terminal protease family protein | GO:0006508|proteolysis;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A02G1295.1,GhM_D03G0946.1,GhM_A08G1538.1,GhM_D08G1493.1,GhM_A11G0261.1,GhM_D11G0256.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G64060 | ATRBOH F, ATRBOHF, RBOHAP108, RBOHF; ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F); NAD(P)H oxidase | GO:0009873|ethylene mediated signaling pathway;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0050665|hydrogen peroxide biosynthetic process;GO:0043069|negative regulation of programmed cell death;GO:0016174|NAD(P)H oxidase activity;GO:0005887|integral to plasma membrane;GO:0006952|defense response;GO:0009723|response to ethylene stimulus;GO:0010119|regulation of stomatal movement;GO:0052542|callose deposition during defense response;GO:0005886|plasma membrane;GO:0002679|respiratory burst involved in defense response;GO:0009738|abscisic acid mediated signaling pathway | GhM_A02G1305.1,GhM_D03G0938.1,GhM_A08G1543.1,GhM_D08G1498.1,GhM_A12G2878.1,GhM_D12G2768.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G41590 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1306.1,GhM_D03G0937.1,GhM_A08G1544.1,GhM_D08G1499.1,GhM_A11G0259.1,GhM_D11G0254.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G21320||AT1G76940 | RNA recognition motif (RRM)-containing protein||nucleic acid binding / nucleotide binding | GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A02G1360.1,GhM_D03G0784.1,GhM_A05G2720.1,GhM_D05G2720.1,GhM_A05G3037.1,GhM_D05G3035.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G57550 | AGK2, GK-2; AGK2 (GUANYLATE KINASE); guanylate kinase | GO:0009117|nucleotide metabolic process;GO:0004385|guanylate kinase activity;GO:0005575|cellular_component | GhM_A02G1424.1,GhM_D03G0853.1,GhM_A09G1571.1,GhM_D09G1470.1,GhM_A11G3923.1,GhM_D11G3836.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G27620 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A02G1500.1,GhM_D03G0620.1,GhM_A08G2851.1,GhM_D08G2794.1,GhM_A13G2120.1,GhM_D13G2006.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G79770 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G1549.1,GhM_D03G0660.1,GhM_A05G1461.1,GhM_D05G1475.1,GhM_A10G0740.1,GhM_D10G0718.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G32890 | zinc finger (GATA type) family protein | GO:0009416|response to light stimulus;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0007623|circadian rhythm | GhM_A02G1551.1,GhM_D03G0662.1,GhM_A06G2451.1,GhM_D06G2448.1,GhM_A10G0743.1,GhM_D10G0720.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G16240||AT4G17340 | TIP2;2, DELTA-TIP2; TIP2;2 (TONOPLAST INTRINSIC PROTEIN 2;2); water channel||DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1; DELTA-TIP; ammonia transporter/ methylammonium transmembrane transporter/ water channel | GO:0015250|water channel activity;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009505|plant-type cell wall;GO:0006810|transport;GO:0015200|methylammonium transmembrane transporter activity;GO:0006833|water transport;GO:0009651|response to salt stress;GO:0042807|central vacuole;GO:0015204|urea transmembrane transporter activity;GO:0005618|cell wall;GO:0000326|protein storage vacuole;GO:0005886|plasma membrane;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0015840|urea transport;GO:0005773|vacuole;GO:0051739|ammonia transmembrane transporter activity | GhM_A02G1560.1,GhM_D03G0676.1,GhM_A03G0155.1,GhM_D03G1941.1,GhM_A08G2209.1,GhM_D08G2163.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G16230||AT4G29080 | PAP2, IAA27; PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor||RNA binding / catalytic | GO:0003723|RNA binding;GO:0016070|RNA metabolic process;GO:0003824|catalytic activity;GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0005739|mitochondrion | GhM_A02G1562.1,GhM_D03G0677.1,GhM_A02G1563.1,GhM_A02G1564.1,GhM_A05G1450.1,GhM_D05G1464.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G79860 | ATROPGEF12, ROPGEF12, MEE64; ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12); Rho guanyl-nucleotide exchange factor | GO:0005089|Rho guanyl-nucleotide exchange factor activity;GO:0005886|plasma membrane;GO:0009793|embryonic development ending in seed dormancy;GO:0009860|pollen tube growth | GhM_A02G1578.1,GhM_D03G0797.1,GhM_A05G1439.1,GhM_D05G1454.1,GhM_D10G0743.1,GhM_A10G0912.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15940 | glycosyl transferase family 1 protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009058|biosynthetic process;GO:0009507|chloroplast | GhM_A02G1602.1,GhM_D03G0815.1,GhM_A05G1411.1,GhM_D05G1424.1,GhM_A10G0880.1,GhM_D10G0760.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G15490 | hydrolase, alpha/beta fold family protein | GO:0016787|hydrolase activity | GhM_A02G1639.1,GhM_D03G0835.1,GhM_A05G1376.1,GhM_D05G1386.1,GhM_A10G0861.1,GhM_D10G0781.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G16660 | unknown protein | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A02G1663.1,GhM_D03G0606.1,GhM_A11G3824.1,GhM_D11G3741.1,GhM_A13G2114.1,GhM_D13G2003.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24660 | ATHB22, MEE68; ATHB22 (HOMEOBOX PROTEIN 22); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009793|embryonic development ending in seed dormancy;GO:0003677|DNA binding | GhM_A02G1720.1,GhM_D03G0443.1,GhM_A11G2430.1,GhM_D11G2459.1,GhM_A12G1178.1,GhM_D12G0946.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G22500 | UCP5, ATPUMP5, DIC1; UCP5 (UNCOUPLING PROTEIN 5); binding | GO:0006810|transport;GO:0005488|binding;GO:0005739|mitochondrion;GO:0006839|mitochondrial transport;GO:0005310|dicarboxylic acid transmembrane transporter activity;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A02G1724.1,GhM_D03G0448.1,GhM_A03G2333.1,GhM_D02G2364.1,GhM_A11G2434.1,GhM_D11G2453.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39400 | BRI1, CBB2, DWF2, BIN1, ATBRI1; BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase | GO:0009826|unidimensional cell growth;GO:0005515|protein binding;GO:0010224|response to UV-B;GO:0004672|protein kinase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0009729|detection of brassinosteroid stimulus;GO:0010268|brassinosteroid homeostasis;GO:0009911|positive regulation of flower development;GO:0042803|protein homodimerization activity;GO:0043234|protein complex;GO:0010584|pollen exine formation;GO:0048657|tapetal cell differentiation;GO:0005768|endosome;GO:0046982|protein heterodimerization activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity | GhM_A02G1778.1,GhM_D03G0502.1,GhM_A11G0647.1,GhM_D11G0656.1,GhM_A11G2645.1,GhM_D11G2607.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G16880 | VHS domain-containing protein / GAT domain-containing protein | GO:0005795|Golgi stack;GO:0006886|intracellular protein transport;GO:0006891|intra-Golgi vesicle-mediated transport;GO:0005886|plasma membrane;GO:0008565|protein transporter activity | GhM_A02G1831.1,GhM_D03G0563.1,GhM_A08G2864.1,GhM_D08G2807.1,GhM_A13G2103.1,GhM_D13G1990.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G17720 | RNA recognition motif (RRM)-containing protein | GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_A02G1833.1,GhM_D03G0565.1,GhM_A13G1199.1,GhM_D13G1079.1,GhM_A13G2104.1,GhM_D13G1991.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39910 | ATUBP3, UBP3; ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3); ubiquitin-specific protease | GO:0005634|nucleus;GO:0006499|N-terminal protein myristoylation | GhM_A02G1865.1,GhM_D03G0395.1,GhM_A11G2379.1,GhM_D11G2510.1,GhM_A12G0977.1,GhM_D12G0839.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39850 | PXA1, PED3, CTS; PXA1 (PEROXISOMAL ABC TRANSPORTER 1); ATPase, coupled to transmembrane movement of substances | GO:0015916|fatty acyl coenzyme A transport;GO:0005777|peroxisome;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0010030|positive regulation of seed germination;GO:0006635|fatty acid beta-oxidation | GhM_A02G1870.1,GhM_D03G0390.1,GhM_A11G2364.1,GhM_D11G2531.1,GhM_A12G0943.1,GhM_D12G0846.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39730||AT2G22170 | lipid-associated family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009579|thylakoid;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A02G1876.1,GhM_D03G0387.1,GhM_A11G2352.1,GhM_D11G2547.1,GhM_A12G1241.1,GhM_D12G1186.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G10490||AT4G38062 | ||MSL2; MSL2 (MscS-LIKE 2); ion channel | ;GO:0009507|chloroplast;GO:0009526|plastid envelope;GO:0009657|plastid organization;GO:0016020|membrane;GO:0005216|ion channel activity | GhM_A02G1882.1,GhM_D03G0380.1,GhM_A02G1883.1,GhM_A02G1884.1,GhM_A12G1187.1,GhM_D12G0892.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G65530||AT5G10520 | protein kinase, putative||RBK1; RBK1 (Rop Binding protein Kinases 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0012505|endomembrane system;GO:0009814|defense response, incompatible interaction;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G1893.1,GhM_D03G0370.1,GhM_A12G1190.1,GhM_A11G2451.1,GhM_D11G2433.1,GhM_D12G0886.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37870 | PCK1, PEPCK; PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1); ATP binding / phosphoenolpyruvate carboxykinase (ATP)/ phosphoenolpyruvate carboxykinase/ purine nucleotide binding | GO:0004612|phosphoenolpyruvate carboxykinase (ATP) activity;GO:0046686|response to cadmium ion;GO:0005634|nucleus;GO:0004611|phosphoenolpyruvate carboxykinase activity;GO:0005730|nucleolus;GO:0005829|cytosol;GO:0009817|defense response to fungus, incompatible interaction;GO:0016020|membrane;GO:0006094|gluconeogenesis;GO:0005524|ATP binding;GO:0017076|purine nucleotide binding | GhM_A02G1913.1,GhM_D03G0351.1,GhM_A11G2492.1,GhM_D11G2395.1,GhM_A12G1084.1,GhM_D12G0965.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64500||AT2G22730 | transporter-related||membrane protein-related | GO:0008150|biological_process;GO:0015144|carbohydrate transmembrane transporter activity;GO:0003674|molecular_function;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity | GhM_A02G1916.1,GhM_D03G0346.1,GhM_A11G2493.1,GhM_D11G2394.1,GhM_A12G1083.1,GhM_D12G0966.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G49750 | AtRLP44; AtRLP44 (Receptor Like Protein 44); protein binding | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0007165|signal transduction | GhM_A02G1944.1,GhM_D03G0324.1,GhM_A11G2520.1,GhM_D11G2370.1,GhM_A12G1053.1,GhM_D12G0990.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G22900 | galactosyl transferase GMA12/MNN10 family protein | GO:0008150|biological_process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0005794|Golgi apparatus;GO:0016740|transferase activity;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A02G1954.1,GhM_D03G0312.1,GhM_A11G2539.1,GhM_D11G2353.1,GhM_A12G1034.1,GhM_D12G1015.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37670 | GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein | GO:0008152|metabolic process;GO:0006526|arginine biosynthetic process;GO:0005737|cytoplasm;GO:0004042|acetyl-CoA:L-glutamate N-acetyltransferase activity;GO:0008652|cellular amino acid biosynthetic process;GO:0008080|N-acetyltransferase activity | GhM_A02G1959.1,GhM_A10G1021.1,GhM_D10G1064.1,GhM_A11G2544.1,GhM_D11G2348.1,GhM_D03G0306.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37650 | SHR, SGR7; SHR (SHORT ROOT); protein binding / sequence-specific DNA binding / transcription factor | GO:0055072|iron ion homeostasis;GO:0005515|protein binding;GO:0032350|regulation of hormone metabolic process;GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0003700|transcription factor activity;GO:0009956|radial pattern formation;GO:0008356|asymmetric cell division | GhM_A02G1963.1,GhM_D03G0301.1,GhM_A11G2554.1,GhM_D11G2340.1,GhM_A12G1030.1,GhM_D12G1021.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G14750||AT3G03900 | APK, AKN1, ATAKN1; APK (APS KINASE); ATP binding / adenylylsulfate kinase/ kinase/ transferase, transferring phosphorus-containing groups||adenylylsulfate kinase, putative | GO:0009507|chloroplast;GO:0009536|plastid;GO:0010439|regulation of glucosinolate biosynthetic process;GO:0016772|transferase activity, transferring phosphorus-containing groups;GO:0016310|phosphorylation;GO:0005829|cytosol;GO:0004020|adenylylsulfate kinase activity;GO:0016301|kinase activity;GO:0000103|sulfate assimilation;GO:0005524|ATP binding;GO:0048232|male gamete generation | GhM_A02G1966.1,GhM_D03G0298.1,GhM_A11G3748.1,GhM_D11G3670.1,GhM_A13G2308.1,GhM_D13G2196.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G67480 | BT4, ATBT4; BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator | GO:0005515|protein binding;GO:0030528|transcription regulator activity;GO:0009739|response to gibberellin stimulus;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0005886|plasma membrane | GhM_A02G1970.1,GhM_D03G0293.1,GhM_A11G0588.1,GhM_D11G0583.1,GhM_D11G2330.1,GhM_A11G2566.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37580||AT2G23060 | HLS1, COP3, UNS2; HLS1 (HOOKLESS 1); N-acetyltransferase||GCN5-related N-acetyltransferase (GNAT) family protein | GO:0009826|unidimensional cell growth;GO:0009640|photomorphogenesis;GO:0008152|metabolic process;GO:0009734|auxin mediated signaling pathway;GO:0009723|response to ethylene stimulus;GO:0005575|cellular_component;GO:0008080|N-acetyltransferase activity | GhM_A02G1973.1,GhM_D03G0290.1,GhM_A11G2575.1,GhM_D11G2324.1,GhM_A12G1008.1,GhM_D12G1036.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37530||AT5G67400||AT4G37520 | peroxidase 50 (PER50) (P50) (PRXR2)||peroxidase 73 (PER73) (P73) (PRXR11)||peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0009651|response to salt stress;GO:0009055|electron carrier activity | GhM_A02G1977.1,GhM_D03G0288.1,GhM_A10G1027.1,GhM_D10G1060.1,GhM_D12G1050.1,GhM_A12G0896.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G43100||AT3G50050 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A02G1990.1,GhM_D03G0277.1,GhM_A11G0584.1,GhM_D11G0579.1,GhM_A11G2604.1,GhM_D11G2298.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36920 | AP2, FLO2, FL1; AP2 (APETALA 2); transcription factor | GO:0030154|cell differentiation;GO:0005634|nucleus;GO:0019953|sexual reproduction;GO:0009908|flower development;GO:0010073|meristem maintenance;GO:0006355|regulation of transcription, DNA-dependent;GO:0048316|seed development;GO:0003700|transcription factor activity;GO:0010093|specification of floral organ identity | GhM_A02G2011.1,GhM_D03G0256.1,GhM_A11G2284.1,GhM_D11G2249.1,GhM_A12G0860.1,GhM_D12G1079.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36950||AT5G67080 | MAPKKK19; MAPKKK19; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||MAPKKK21; MAPKKK21; ATP binding / protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A02G2015.1,GhM_D03G0251.1,GhM_A11G2259.1,GhM_D11G2227.1,GhM_A12G0853.1,GhM_D12G1088.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G50340 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G2017.1,GhM_D03G0249.1,GhM_A11G2251.1,GhM_D11G2221.1,GhM_A12G0840.1,GhM_D12G1096.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G50620 | nodulation protein-related | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A02G2042.1,GhM_D03G0225.1,GhM_A10G1049.1,GhM_D10G1036.1,GhM_A11G2229.1,GhM_D11G2202.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G23450 | protein kinase family protein | GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation | GhM_A02G2069.1,GhM_D03G0192.1,GhM_A11G2195.1,GhM_A10G1072.1,GhM_D10G1016.1,GhM_D11G2169.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G23690 | unknown protein | GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0003674|molecular_function | GhM_A02G2073.1,GhM_D03G0187.1,GhM_A11G2189.1,GhM_D11G2163.1,GhM_A12G0780.1,GhM_D12G0764.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66600 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G2075.1,GhM_D03G0185.1,GhM_A11G2185.1,GhM_D11G2158.1,GhM_A12G0778.1,GhM_D12G0762.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36750 | quinone reductase family protein | GO:0005886|plasma membrane;GO:0010181|FMN binding;GO:0016481|negative regulation of transcription;GO:0016491|oxidoreductase activity | GhM_A02G2101.1,GhM_D03G0166.1,GhM_A11G2173.1,GhM_D11G2148.1,GhM_D12G0743.1,GhM_A12G0753.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36740 | HB-5, ATHB40; ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor | GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A02G2102.1,GhM_D03G0165.1,GhM_A11G0541.1,GhM_D11G0528.1,GhM_D11G2147.1,GhM_A11G2172.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36550 | binding / ubiquitin-protein ligase | GO:0005488|binding;GO:0016567|protein ubiquitination;GO:0000151|ubiquitin ligase complex;GO:0004842|ubiquitin-protein ligase activity | GhM_A02G2130.1,GhM_D03G0137.1,GhM_A10G1094.1,GhM_D10G0999.1,GhM_A11G2133.1,GhM_D11G2107.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75310||AT4G36520 | heat shock protein binding||AUL1; AUL1; heat shock protein binding | GO:0031072|heat shock protein binding | GhM_A02G2138.1,GhM_D03G0130.1,GhM_A02G2139.1,GhM_A02G2140.1,GhM_A02G2141.1,GhM_D11G2102.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75420 | glycosyl transferase family 1 protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009058|biosynthetic process;GO:0005575|cellular_component | GhM_A02G2148.1,GhM_D03G0124.1,GhM_A05G2130.1,GhM_D05G2151.1,GhM_A11G2104.1,GhM_D11G2081.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G15380||AT1G80160 | lactoylglutathione lyase family protein / glyoxalase I family protein | GO:0012505|endomembrane system;GO:0004462|lactoylglutathione lyase activity;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process | GhM_A02G2164.1,GhM_A10G1118.1,GhM_D10G0978.1,GhM_A12G0692.1,GhM_D12G0687.1,GhM_D03G0109.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66210||AT2G17890 | CPK16; CPK16; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ protein kinase/ protein serine/threonine kinase||CPK28; CPK28; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ protein kinase/ protein serine/threonine kinase | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0004713|protein tyrosine kinase activity;GO:0004683|calmodulin-dependent protein kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G2179.1,GhM_D03G0092.1,GhM_A10G1127.1,GhM_D10G0965.1,GhM_A11G2041.1,GhM_D11G2026.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36040 | DNAJ heat shock N-terminal domain-containing protein (J11) | GO:0006950|response to stress;GO:0005634|nucleus;GO:0006457|protein folding;GO:0031072|heat shock protein binding | GhM_A02G2181.1,GhM_D03G0090.1,GhM_A11G0516.1,GhM_D11G0499.1,GhM_A11G2036.1,GhM_D11G2022.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66140 | PAD2; PAD2 (PROTEASOME ALPHA SUBUNIT D 2); endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009507|chloroplast;GO:0019773|proteasome core complex, alpha-subunit complex;GO:0005839|proteasome core complex;GO:0005773|vacuole | GhM_A02G2191.1,GhM_D03G0080.1,GhM_A03G2646.1,GhM_D02G2665.1,GhM_A11G2024.1,GhM_D11G2011.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G42180 | peroxidase 64 (PER64) (P64) (PRXR4) | GO:0006979|response to oxidative stress;GO:0009505|plant-type cell wall;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0009055|electron carrier activity | GhM_A02G2207.1,GhM_D03G0063.1,GhM_A05G2057.1,GhM_D05G2073.1,GhM_A06G0022.1,GhM_D06G0016.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G56490 | zinc-binding protein, putative / protein kinase C inhibitor, putative | GO:0005777|peroxisome;GO:0006790|sulfur metabolic process;GO:0009150|purine ribonucleotide metabolic process;GO:0047627|adenylylsulfatase activity;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0005080|protein kinase C binding | GhM_A03G0013.1,GhM_A04G1928.1,GhM_D13G0015.1,GhM_A13G0010.1,GhM_D02G0008.1,GhM_A07G0003.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G19110 | protein kinase, putative | GO:0004713|protein tyrosine kinase activity | GhM_A03G0019.1,GhM_D03G2085.1,GhM_A08G2010.1,GhM_D08G1960.1,GhM_A12G2564.1,GhM_D12G2449.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G19040 | EDR2; EDR2; lipid binding | GO:0008289|lipid binding;GO:0005886|plasma membrane;GO:0008150|biological_process | GhM_A03G0021.1,GhM_D03G2081.1,GhM_A08G2017.1,GhM_D08G1969.1,GhM_A12G2576.1,GhM_D12G2461.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G19010 | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | GO:0008152|metabolic process;GO:0016207|4-coumarate-CoA ligase activity | GhM_A03G0022.1,GhM_D03G2080.1,GhM_A03G0023.1,GhM_D08G1984.1,GhM_A08G2032.1,GhM_A08G2033.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G32200 | ATS1, ACT1; ATS1; glycerol-3-phosphate O-acyltransferase | GO:0009507|chloroplast;GO:0009536|plastid;GO:0004366|glycerol-3-phosphate O-acyltransferase activity;GO:0009570|chloroplast stroma;GO:0006655|phosphatidylglycerol biosynthetic process | GhM_A03G0038.1,GhM_D03G2066.1,GhM_A08G2048.1,GhM_A11G0356.1,GhM_D11G0341.1,GhM_D08G1997.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G46910 | transcription factor jumonji (jmj) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0010200|response to chitin;GO:0045449|regulation of transcription | GhM_A03G0041.1,GhM_D03G2063.1,GhM_A08G2052.1,GhM_D08G2002.1,GhM_A12G2605.1,GhM_D12G2492.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G03000||AT1G32250 | calmodulin, putative | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005509|calcium ion binding;GO:0043269|regulation of ion transport;GO:0000325|plant-type vacuole;GO:0005575|cellular_component | GhM_A03G0045.1,GhM_D03G2059.1,GhM_A08G2053.1,GhM_D08G2003.1,GhM_A12G2608.1,GhM_D12G2494.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G17790 | INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71940.1); Has 2258 Blast hits to 2258 proteins in 517 species: Archae - 4; Bacteria - 1129; Metazoa - 188; Fungi - 22; Plants - 104; Viruses - 0; Other Eukaryotes - 811 (source: NCBI BLink). | GO:0008150|biological_process | GhM_A03G0056.1,GhM_D03G2047.1,GhM_A08G2066.1,GhM_D09G2317.1,GhM_A09G2435.1,GhM_D08G2017.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G46790 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G0072.1,GhM_D03G2029.1,GhM_A11G0338.1,GhM_D11G0324.1,GhM_A12G2626.1,GhM_D12G2514.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G17830||AT5G46800 | BOU; BOU (A BOUT DE SOUFFLE); binding / transporter||peptidase M20/M25/M40 family protein | GO:0009507|chloroplast;GO:0016787|hydrolase activity;GO:0006810|transport;GO:0005488|binding;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0046983|protein dimerization activity;GO:0015822|ornithine transport;GO:0006839|mitochondrial transport;GO:0005215|transporter activity;GO:0005743|mitochondrial inner membrane | GhM_A03G0073.1,GhM_D03G2028.1,GhM_A11G0337.1,GhM_D11G0323.1,GhM_A12G2627.1,GhM_D12G2515.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G32740 | protein binding / zinc ion binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A03G0094.1,GhM_D03G2006.1,GhM_D12G2552.1,GhM_A08G2126.1,GhM_D08G2081.1,GhM_A12G2663.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G47180 | vesicle-associated membrane family protein / VAMP family protein | GO:0005886|plasma membrane;GO:0005198|structural molecule activity | GhM_A03G0117.1,GhM_D03G1985.1,GhM_A08G2168.1,GhM_D08G2124.1,GhM_A09G2392.1,GhM_D09G2280.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G47310 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0133.1,GhM_D03G1972.1,GhM_A08G2187.1,GhM_D08G2143.1,GhM_A12G2695.1,GhM_D12G2583.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G47390 | myb family transcription factor | GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0045449|regulation of transcription;GO:0046686|response to cadmium ion;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | GhM_A03G0140.1,GhM_D03G1962.1,GhM_A08G2195.1,GhM_D08G2152.1,GhM_A12G2701.1,GhM_D12G2588.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G17550 | PEX19-2, PEROXIN 19-2; PEX19-2 | GO:0007031|peroxisome organization;GO:0005777|peroxisome;GO:0003674|molecular_function | GhM_A03G0158.1,GhM_D03G1938.1,GhM_A08G2228.1,GhM_D08G2176.1,GhM_A12G2719.1,GhM_D12G2605.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G17260 | L-lactate dehydrogenase, putative | GO:0004457|lactate dehydrogenase activity;GO:0003824|catalytic activity;GO:0009737|response to abscisic acid stimulus;GO:0005488|binding;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0004459|L-lactate dehydrogenase activity;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | GhM_A03G0168.1,GhM_D03G1929.1,GhM_A08G2245.1,GhM_D08G2196.1,GhM_A12G2749.1,GhM_D12G2635.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G62520 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0174.1,GhM_D03G1924.1,GhM_A11G0300.1,GhM_A12G2741.1,GhM_D12G2628.1,GhM_D11G0285.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12260 | VND4, EMB2749, ANAC007; ANAC007 (ARABIDOPSIS NAC 007); transcription factor | GO:0009793|embryonic development ending in seed dormancy;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0045449|regulation of transcription | GhM_A03G0186.1,GhM_D03G1914.1,GhM_A08G2253.1,GhM_D08G2204.1,GhM_A12G2731.1,GhM_D12G2618.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12350 | MYB42, AtMYB42; MYB42 (myb domain protein 42); transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_A03G0195.1,GhM_D03G1905.1,GhM_A12G2759.1,GhM_A08G2263.1,GhM_D08G2217.1,GhM_D12G2644.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12080 | DNA-binding family protein | GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0005737|cytoplasm;GO:0003677|DNA binding;GO:0005730|nucleolus | GhM_A03G0208.1,GhM_D03G1895.1,GhM_A08G2284.1,GhM_D08G2237.1,GhM_A11G0231.1,GhM_D11G0225.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G45360 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0215.1,GhM_D03G1889.1,GhM_D12G2653.1,GhM_A08G2270.1,GhM_D08G2224.1,GhM_A12G2766.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12230 | esterase/lipase/thioesterase family protein | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0005575|cellular_component | GhM_A03G0217.1,GhM_D03G1887.1,GhM_A11G0228.1,GhM_D11G0222.1,GhM_A12G2762.1,GhM_D12G2649.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12500 | phosphate translocator-related | GO:0016020|membrane | GhM_A03G0232.1,GhM_D03G1880.1,GhM_A08G2293.1,GhM_D08G2245.1,GhM_A12G2786.1,GhM_D12G2673.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G22990 | SPX (SYG1/Pho81/XPR1) domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0245.1,GhM_D03G1869.1,GhM_A12G1372.1,GhM_D12G1314.1,GhM_A12G2801.1,GhM_D12G2689.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G41350 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005739|mitochondrion | GhM_A03G0308.1,GhM_D03G1816.1,GhM_A08G2397.1,GhM_D08G2340.1,GhM_A12G2854.1,GhM_D12G2741.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19330 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0310.1,GhM_D03G1814.1,GhM_A09G2329.1,GhM_D09G2230.1,GhM_A12G2855.1,GhM_D12G2742.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G0314.1,GhM_A12G1629.1,GhM_A08G0711.1,GhM_Scaf310G394.1,GhM_A11G2348.1,GhM_A12G1588.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G41390||AT1G63830 | proline-rich family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT1G63830.2); Has 12019 Blast hits to 5816 proteins in 448 species: Archae - 6; Bacteria - 1151; Metazoa - 4980; Fungi - 1500; Plants - 2605; Viruses - 338; Other Eukaryotes - 1439 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A03G0318.1,GhM_D08G1529.1,GhM_A08G1579.1,GhM_A12G2858.1,GhM_D12G2747.1,GhM_D03G1811.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G30090 | GCN5-related N-acetyltransferase (GNAT) family protein | GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0008080|N-acetyltransferase activity | GhM_A03G0409.1,GhM_D03G1717.1,GhM_A08G2606.1,GhM_D08G2548.1,GhM_A13G2979.1,GhM_D13G2883.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G44990||AT2G36870 | XTR8, ATXTR8; XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase||xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | GO:0012505|endomembrane system;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0048046|apoplast;GO:0006073|cellular glucan metabolic process;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0005618|cell wall;GO:0042546|cell wall biogenesis | GhM_A03G0426.1,GhM_D03G1701.1,GhM_A05G1177.1,GhM_D05G1196.1,GhM_A08G2592.1,GhM_D08G2534.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G60760 | 2-phosphoglycerate kinase-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0448.1,GhM_D03G1682.1,GhM_A05G1166.1,GhM_D05G1185.1,GhM_A13G2962.1,GhM_D13G2868.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G60700 | glycosyltransferase family protein 2 | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009058|biosynthetic process;GO:0005575|cellular_component | GhM_A03G0460.1,GhM_D03G1670.1,GhM_A05G1149.1,GhM_D05G1166.1,GhM_A08G2579.1,GhM_D08G2518.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G28370 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST Arabidopsis thaliana protein match is: integral membrane protein, putative (TAIR:AT2G37200.1); Has 100 Blast hits to 100 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A03G0468.1,GhM_D03G1662.1,GhM_A05G1142.1,GhM_D05G1159.1,GhM_A08G2569.1,GhM_D08G2504.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G28390 | SAND family protein | GO:0009507|chloroplast | GhM_A03G0475.1,GhM_D03G1654.1,GhM_A05G1139.1,GhM_D05G1153.1,GhM_A08G2566.1,GhM_D08G2501.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G28400||AT5G60680 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G0476.1,GhM_D03G1653.1,GhM_A13G2946.1,GhM_D13G2849.1,GhM_D08G0015.1,GhM_A08G0021.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G27430 | signal peptidase subunit family protein | GO:0008233|peptidase activity;GO:0006465|signal peptide processing;GO:0005618|cell wall | GhM_A03G0479.1,GhM_D03G1650.1,GhM_A05G1134.1,GhM_D05G1148.1,GhM_A08G0023.1,GhM_D08G0017.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G60580 | zinc finger (C3HC4-type RING finger) family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A03G0482.1,GhM_D05G1142.1,GhM_A05G1127.1,GhM_D08G2492.1,GhM_A08G2559.1,GhM_D03G1646.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G28550 | RAP2.7, TOE1; RAP2.7 (RELATED TO AP2.7); DNA binding / transcription factor | GO:0005634|nucleus;GO:0009887|organ morphogenesis;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010228|vegetative to reproductive phase transition of meristem | GhM_A03G0496.1,GhM_D03G1633.1,GhM_D05G1120.1,GhM_A05G1104.1,GhM_D08G0023.1,GhM_A08G0029.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G45830 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0508.1,GhM_D03G1623.1,GhM_A05G1096.1,GhM_D05G1108.1,GhM_A08G0032.1,GhM_D08G0026.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G03740 | ATBPM4; ATBPM4 (BTB-POZ and MATH domain 4); protein binding | GO:0005515|protein binding;GO:0006970|response to osmotic stress;GO:0005829|cytosol;GO:0042631|cellular response to water deprivation | GhM_A03G0526.1,GhM_D03G1607.1,GhM_A11G2853.1,GhM_D11G2806.1,GhM_A13G2852.1,GhM_D13G2733.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G59730 | ATEXO70H7; ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7); protein binding | GO:0005515|protein binding;GO:0005634|nucleus;GO:0005829|cytosol;GO:0006904|vesicle docking during exocytosis;GO:0000145|exocyst;GO:0006887|exocytosis | GhM_A03G0527.1,GhM_D03G1606.1,GhM_A05G1083.1,GhM_D05G1096.1,GhM_A07G1151.1,GhM_D07G1131.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G46510 | PUB13, ATPUB13; PUB13 (PLANT U-BOX 13); ubiquitin-protein ligase | GO:0005634|nucleus;GO:0016567|protein ubiquitination;GO:0005829|cytosol;GO:0004842|ubiquitin-protein ligase activity | GhM_A03G0575.1,GhM_D03G1545.1,GhM_A05G1057.1,GhM_D05G1070.1,GhM_A07G1173.1,GhM_D07G1157.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G27620 | CYCH;1; CYCH;1 (CYCLIN H;1); cyclin-dependent protein kinase/ protein binding / protein kinase | GO:0005515|protein binding;GO:0051726|regulation of cell cycle;GO:0004672|protein kinase activity;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0004693|cyclin-dependent protein kinase activity;GO:0006413|translational initiation | GhM_A03G0579.1,GhM_D10G1883.1,GhM_A11G3344.1,GhM_D11G3258.1,GhM_A13G1601.1,GhM_D01G1541.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G55530 | SDIR1; SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding | GO:0005515|protein binding;GO:0005792|microsome;GO:0009737|response to abscisic acid stimulus;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0043231|intracellular membrane-bounded organelle;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding | GhM_A03G0620.1,GhM_D03G1498.1,GhM_A13G2908.1,GhM_A10G2809.1,GhM_D10G2773.1,GhM_D13G2807.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G46620||AT5G59550 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0010200|response to chitin | GhM_A03G0621.1,GhM_D03G1497.1,GhM_A07G1200.1,GhM_D07G1185.1,GhM_D11G2093.1,GhM_A11G2115.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G59570||AT3G46640 | myb family transcription factor||PCL1, LUX; PCL1 (PHYTOCLOCK 1); DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0007623|circadian rhythm;GO:0045449|regulation of transcription | GhM_A03G0624.1,GhM_D03G1491.1,GhM_A05G1029.1,GhM_D05G1040.1,GhM_A07G1203.1,GhM_D07G1189.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G11400 | EIF3G1, ATEIF3G1; eukaryotic translation initiation factor 3G / eIF3g | GO:0003723|RNA binding;GO:0003743|translation initiation factor activity;GO:0005852|eukaryotic translation initiation factor 3 complex;GO:0005886|plasma membrane;GO:0006413|translational initiation | GhM_A03G0630.1,GhM_D03G1486.1,GhM_A06G2169.1,GhM_D06G2149.1,GhM_A10G2832.1,GhM_D10G2796.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G29540 | ATRPC14, ATRPAC14; ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization | GO:0009304|tRNA transcription;GO:0003899|DNA-directed RNA polymerase activity;GO:0005666|DNA-directed RNA polymerase III complex;GO:0003677|DNA binding;GO:0046983|protein dimerization activity | GhM_A03G0649.1,GhM_D03G1463.1,GhM_A06G1339.1,GhM_A12G1933.1,GhM_A06G1358.1,GhM_D07G2163.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G58860 | CYP86A1, CYP86; CYP86A1 (CYTOCHROME P450 86 A1); fatty acid (omega-1)-hydroxylase/ oxygen binding | GO:0010345|suberin biosynthetic process;GO:0008393|fatty acid (omega-1)-hydroxylase activity;GO:0006631|fatty acid metabolic process;GO:0019825|oxygen binding;GO:0005773|vacuole | GhM_A03G0676.1,GhM_D03G1429.1,GhM_A05G0981.1,GhM_D05G0998.1,GhM_A07G1240.1,GhM_D07G1222.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G29650||AT4G00370 | ANTR2, PHT4;4; ANTR2; inorganic phosphate transmembrane transporter/ organic anion transmembrane transporter||ANTR1; PHT4;1; carbohydrate transmembrane transporter/ inorganic diphosphate transmembrane transporter/ inorganic phosphate transmembrane transporter/ organic anion transmembrane transporter/ sugar:hydrogen symporter | GO:0009507|chloroplast;GO:0009624|response to nematode;GO:0015144|carbohydrate transmembrane transporter activity;GO:0009536|plastid;GO:0030504|inorganic diphosphate transmembrane transporter activity;GO:0009579|thylakoid;GO:0005315|inorganic phosphate transmembrane transporter activity;GO:0008514|organic anion transmembrane transporter activity;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity | GhM_A03G0677.1,GhM_D03G1428.1,GhM_A07G1739.1,GhM_D07G1710.1,GhM_A11G1038.1,GhM_D11G1051.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G50530||AT5G63490 | CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | ;GO:0009507|chloroplast | GhM_A03G0718.1,GhM_D03G1391.1,GhM_A07G0618.1,GhM_D07G0612.1,GhM_A11G0458.1,GhM_D11G0439.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G63500||AT3G48660 | unknown protein | GO:0008150|biological_process;GO:0031225|anchored to membrane;GO:0012505|endomembrane system;GO:0003674|molecular_function | GhM_A03G0719.1,GhM_D03G1390.1,GhM_A07G0617.1,GhM_D07G0611.1,GhM_A11G0460.1,GhM_D11G0441.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G61760 | ATIPK2BETA, IPK2B, IPK2BETA; ATIPK2BETA; inositol or phosphatidylinositol kinase/ inositol trisphosphate 6-kinase | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0004428|inositol or phosphatidylinositol kinase activity;GO:0010264|myo-inositol hexakisphosphate biosynthetic process;GO:0000823|inositol trisphosphate 6-kinase activity | GhM_A03G0746.1,GhM_D03G1356.1,GhM_A11G0079.1,GhM_D11G0082.1,GhM_A12G2474.1,GhM_D12G2359.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G51050 | mitochondrial substrate carrier family protein | GO:0006810|transport;GO:0005509|calcium ion binding;GO:0005488|binding;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A03G0749.1,GhM_D03G1352.1,GhM_A07G0574.1,GhM_D07G0562.1,GhM_A12G2470.1,GhM_D12G2355.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G07300 | BON2; BON2 (BONZAI 2); calcium-dependent phospholipid binding | GO:0005886|plasma membrane;GO:0005544|calcium-dependent phospholipid binding | GhM_A03G0756.1,GhM_D09G2873.1,GhM_A09G3014.1,GhM_D11G0460.1,GhM_A11G0479.1,GhM_D03G1346.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G0774.1,GhM_A07G1318.1,GhM_A04G0403.1,GhM_A09G0999.1,GhM_A13G0653.1,GhM_A13G0804.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G47420 | glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative | GO:0008643|carbohydrate transport;GO:0005351|sugar:hydrogen symporter activity | GhM_A03G0795.1,GhM_D03G1302.1,GhM_A07G0518.1,GhM_D07G0511.1,GhM_A12G2517.1,GhM_D12G2401.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19900 | PRLI-interacting factor, putative | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A03G0808.1,GhM_D05G0747.1,GhM_A05G0724.1,GhM_D08G0946.1,GhM_A08G0988.1,GhM_D06G1668.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G24820 | 26S proteasome regulatory subunit, putative (RPN7) | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0030163|protein catabolic process;GO:0008541|proteasome regulatory particle, lid subcomplex;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A03G0845.1,GhM_D03G1258.1,GhM_A09G2987.1,GhM_D09G2846.1,GhM_A12G2389.1,GhM_D12G2283.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G08470 | PEX1; PEX1 (peroxisome 1); ATP binding / ATPase/ binding / nucleoside-triphosphatase/ nucleotide binding / protein binding | GO:0005515|protein binding;GO:0005777|peroxisome;GO:0005488|binding;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A03G0853.1,GhM_A10G0526.1,GhM_A07G1754.1,GhM_D10G0500.1,GhM_D07G1360.1,GhM_D10G1261.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G74780 | nodulin family protein | GO:0012505|endomembrane system | GhM_A03G0867.1,GhM_D03G1098.1,GhM_A10G1390.1,GhM_D11G0355.1,GhM_A10G1391.1,GhM_A11G0370.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G47520 | MDH; MDH (MALATE DEHYDROGENASE); L-malate dehydrogenase/ binding / catalytic/ malate dehydrogenase/ oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009409|response to cold;GO:0003824|catalytic activity;GO:0016615|malate dehydrogenase activity;GO:0005488|binding;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0030060|L-malate dehydrogenase activity;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0005739|mitochondrion;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0010319|stromule;GO:0016491|oxidoreductase activity | GhM_A03G0898.1,GhM_D03G1136.1,GhM_A07G0793.1,GhM_D07G0790.1,GhM_A11G0400.1,GhM_D11G0383.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G60850 | OBP4; OBP4; DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0045449|regulation of transcription | GhM_A03G0958.1,GhM_D03G1193.1,GhM_A07G0715.1,GhM_D07G0709.1,GhM_D11G0411.1,GhM_A11G0429.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G08160 | ATPK3; ATPK3; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0016301|kinase activity;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G0975.1,GhM_D03G1211.1,GhM_A07G0704.1,GhM_D07G0697.1,GhM_A12G2348.1,GhM_D12G2244.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G08180 | ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | GO:0003723|RNA binding;GO:0005730|nucleolus;GO:0042254|ribosome biogenesis | GhM_A03G0977.1,GhM_D03G1213.1,GhM_A07G0702.1,GhM_D07G0695.1,GhM_A12G2350.1,GhM_D12G2246.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G25610||AT1G68710 | haloacid dehalogenase-like hydrolase family protein | GO:0008152|metabolic process;GO:0015914|phospholipid transport;GO:0006754|ATP biosynthetic process;GO:0005739|mitochondrion;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A03G0994.1,GhM_D03G1224.1,GhM_A07G0690.1,GhM_D07G0683.1,GhM_A12G2203.1,GhM_D12G2114.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G48330 | PIMT1, ATPIMT1; PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1); protein-L-isoaspartate (D-aspartate) O-methyltransferase | GO:0009845|seed germination;GO:0009737|response to abscisic acid stimulus;GO:0007568|aging;GO:0009651|response to salt stress;GO:0006464|protein modification process;GO:0005575|cellular_component | GhM_A03G1014.1,GhM_D03G1241.1,GhM_A07G0673.1,GhM_D07G0665.1,GhM_A12G2373.1,GhM_D12G2268.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G45170 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1031.1,GhM_D02G1049.1,GhM_A05G2181.1,GhM_D05G2206.1,GhM_A06G0114.1,GhM_D06G0111.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75380||AT1G19660 | wound-responsive family protein||wound-responsive protein-related | GO:0004518|nuclease activity;GO:0050832|defense response to fungus;GO:0009611|response to wounding | GhM_A03G1051.1,GhM_D02G1066.1,GhM_A05G2140.1,GhM_D05G2162.1,GhM_A06G0082.1,GhM_D06G0082.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G45000 | 26S proteasome regulatory complex subunit p42D, putative | GO:0016787|hydrolase activity;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0030163|protein catabolic process;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A03G1056.1,GhM_D02G1074.1,GhM_A05G2131.1,GhM_A05G2888.1,GhM_D05G2896.1,GhM_D05G2152.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75490 | DNA binding / transcription factor | GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A03G1059.1,GhM_D02G1076.1,GhM_A05G2118.1,GhM_D05G2139.1,GhM_A05G2886.1,GhM_D05G2894.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G45688 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A03G1083.1,GhM_D02G0993.1,GhM_A05G2288.1,GhM_D05G2306.1,GhM_A06G0197.1,GhM_D06G0203.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G47380 | protein phosphatase 2C-related / PP2C-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0004722|protein serine/threonine phosphatase activity;GO:0003824|catalytic activity | GhM_A03G1101.1,GhM_D02G1011.1,GhM_A05G2262.1,GhM_D05G2281.1,GhM_A06G0176.1,GhM_D06G0181.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G23540 | 26S proteasome regulatory subunit, putative | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0030163|protein catabolic process;GO:0009651|response to salt stress;GO:0008541|proteasome regulatory particle, lid subcomplex | GhM_A03G1110.1,GhM_A05G2258.1,GhM_D05G2276.1,GhM_A06G0171.1,GhM_D06G0176.1,GhM_D02G1018.1 | 6 | 0 | Gossypium | Cotton | |||
| - | ATCG00480 | ATPB; chloroplast-encoded gene for beta subunit of ATP synthase | GO:0009507|chloroplast;GO:0031977|thylakoid lumen;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005618|cell wall;GO:0016020|membrane | GhM_A03G1164.1,GhM_Scaf185G309.1,GhM_A04G0796.1,GhM_D02G1061.1,GhM_A08G1161.1,GhM_A13G1592.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73390 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17940.1); Has 95 Blast hits to 95 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 23; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0003674|molecular_function | GhM_A03G1194.1,GhM_D02G1399.1,GhM_A03G2234.1,GhM_D02G2260.1,GhM_A12G3329.1,GhM_D12G3215.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73460 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005737|cytoplasm;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G1197.1,GhM_D02G1402.1,GhM_A07G0743.1,GhM_D07G0733.1,GhM_A11G0022.1,GhM_D11G0026.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G13340 | WD-40 repeat family protein | GO:0008150|biological_process;GO:0005834|heterotrimeric G-protein complex;GO:0003674|molecular_function | GhM_A03G1267.1,GhM_D02G1317.1,GhM_A09G2536.1,GhM_D09G2416.1,GhM_A10G1659.1,GhM_D10G1467.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G68820||AT1G18470 | membrane protein, putative||zinc finger (C3HC4-type RING finger) family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A03G1303.1,GhM_D02G1352.1,GhM_A09G0669.1,GhM_D09G0614.1,GhM_A13G0587.1,GhM_D13G0771.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39670 | glycolipid binding / glycolipid transporter | GO:0051861|glycolipid binding;GO:0046836|glycolipid transport;GO:0005737|cytoplasm;GO:0017089|glycolipid transporter activity | GhM_A03G1354.1,GhM_D02G1345.1,GhM_A12G2155.1,GhM_D12G2061.1,GhM_D08G1477.1,GhM_D02G1406.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G14000 | VIK; VIK (VH1-INTERACTING KINASE); ATP binding / protein kinase/ protein serine/threonine/tyrosine kinase | GO:0004672|protein kinase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0010305|leaf vascular tissue pattern formation;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0009734|auxin mediated signaling pathway;GO:0005575|cellular_component | GhM_A03G1377.1,GhM_D02G1501.1,GhM_A12G2108.1,GhM_D12G2010.1,GhM_A13G0935.1,GhM_D13G0887.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G61240 | protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0005794|Golgi apparatus | GhM_A03G1388.1,GhM_D02G1515.1,GhM_A07G0829.1,GhM_D07G0827.1,GhM_A12G2305.1,GhM_D12G2196.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G69310 | WRKY57, ATWRKY57; WRKY57; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G1392.1,GhM_D02G1519.1,GhM_D12G1998.1,GhM_A12G2096.1,GhM_D13G0916.1,GhM_A13G1003.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G44130||AT1G15670 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1398.1,GhM_D02G1528.1,GhM_A09G2124.1,GhM_D09G2032.1,GhM_A13G0982.1,GhM_D13G0939.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G15830 | AtbZIP3; AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G1443.1,GhM_D02G1563.1,GhM_A12G2046.1,GhM_D12G1952.1,GhM_A13G1295.1,GhM_D13G1199.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G68850||AT1G13580 | peroxidase, putative||LAG13; LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003674|molecular_function;GO:0020037|heme binding;GO:0006499|N-terminal protein myristoylation;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | GhM_A03G1446.1,GhM_D02G1566.1,GhM_A12G2044.1,GhM_D12G1950.1,GhM_A13G1274.1,GhM_D13G1052.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G15950||AT3G25570||AT3G02470 | SAMDC; SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE); adenosylmethionine decarboxylase||adenosylmethionine decarboxylase family protein | GO:0008295|spermidine biosynthetic process;GO:0006596|polyamine biosynthetic process;GO:0004014|adenosylmethionine decarboxylase activity;GO:0005575|cellular_component;GO:0006597|spermine biosynthetic process | GhM_A03G1448.1,GhM_D02G1568.1,GhM_A13G1266.1,GhM_D13G1044.1,GhM_D08G0441.1,GhM_A08G0455.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G07910 | ATRNL, RNL; RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase | GO:0006388|tRNA splicing, via endonucleolytic cleavage and ligation;GO:0004113|2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;GO:0003972|RNA ligase (ATP) activity;GO:0051731|polynucleotide kinase activity | GhM_A03G1467.1,GhM_A08G1497.1,GhM_A05G0822.1,GhM_D05G0844.1,GhM_A07G1746.1,GhM_A05G3126.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G60860||AT1G10870 | AGD4; AGD4 (ARF-GAP domain 4); ARF GTPase activator/ protein binding / zinc ion binding||AGD2; AGD2 (ARF-GAP DOMAIN 2); ARF GTPase activator/ protein binding / zinc ion binding | GO:0005515|protein binding;GO:0032312|regulation of ARF GTPase activity;GO:0008060|ARF GTPase activator activity;GO:0005737|cytoplasm;GO:0008270|zinc ion binding | GhM_A03G1489.1,GhM_D02G1603.1,GhM_A12G2011.1,GhM_D12G1921.1,GhM_A13G0297.1,GhM_D13G0283.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G68020||AT4G17770 | ATTPS5, TPS5; ATTPS5; protein binding / transferase, transferring glycosyl groups / trehalose-phosphatase||ATTPS6, TPS6; ATTPS6; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase | GO:0005515|protein binding;GO:0003825|alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity;GO:0008152|metabolic process;GO:0004805|trehalose-phosphatase activity;GO:0005992|trehalose biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_A03G1492.1,GhM_D02G1606.1,GhM_A08G2062.1,GhM_D08G2012.1,GhM_A11G0351.1,GhM_D11G0338.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75030||AT1G75050 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: ATLP-3 (TAIR:AT1G75030.1); Has 1070 Blast hits to 1056 proteins in 144 species: Archae - 0; Bacteria - 18; Metazoa - 48; Fungi - 48; Plants - 944; Viruses - 4; Other Eukaryotes - 8 (source: NCBI BLink).||ATLP-3; ATLP-3 | GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0003674|molecular_function | GhM_A03G1562.1,GhM_A05G2910.1,GhM_A05G2200.1,GhM_D05G2223.1,GhM_D02G1041.1,GhM_D05G2924.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19330 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1564.1,GhM_D02G1042.1,GhM_A05G2197.1,GhM_D05G2220.1,GhM_A06G0124.1,GhM_D06G0122.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G75080 | BZR1; BZR1 (BRASSINAZOLE-RESISTANT 1); DNA binding / transcription regulator/ transcription repressor | GO:0030528|transcription regulator activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005829|cytosol;GO:0016564|transcription repressor activity | GhM_A03G1567.1,GhM_D02G1045.1,GhM_A05G2194.1,GhM_D05G2218.1,GhM_A05G2908.1,GhM_D05G2920.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G01600||AT1G14910 | epsin N-terminal homology (ENTH) domain-containing protein | GO:0048268|clathrin coat assembly;GO:0030276|clathrin binding;GO:0005488|binding;GO:0030118|clathrin coat;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion;GO:0005545|phosphatidylinositol binding;GO:0016020|membrane;GO:0005543|phospholipid binding | GhM_A03G1622.1,GhM_D02G1692.1,GhM_A04G1862.1,GhM_D04G2333.1,GhM_A05G3587.1,GhM_D05G3549.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G24360 | 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase | GO:0004316|3-oxoacyl-[acyl-carrier-protein] reductase activity;GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0006633|fatty acid biosynthetic process;GO:0009570|chloroplast stroma | GhM_A03G1736.1,GhM_D02G1820.1,GhM_A03G1737.1,GhM_A05G3615.1,GhM_D05G3574.1,GhM_D12G1852.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G23740 | oxidoreductase, zinc-binding dehydrogenase family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009409|response to cold;GO:0003824|catalytic activity;GO:0005488|binding;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0008270|zinc ion binding;GO:0010319|stromule;GO:0016491|oxidoreductase activity | GhM_A03G1887.1,GhM_D02G1942.1,GhM_A09G0345.1,GhM_D09G0322.1,GhM_A05G4295.1,GhM_D04G0641.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G70230 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_A03G1916.1,GhM_D02G1969.1,GhM_A05G3839.1,GhM_D05G3709.1,GhM_A04G1771.1,GhM_D04G2247.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09160 | protein phosphatase 2C-related / PP2C-related | GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity;GO:0003824|catalytic activity | GhM_A03G1998.1,GhM_D02G2032.1,GhM_A08G2669.1,GhM_D08G2613.1,GhM_A11G3395.1,GhM_D11G3307.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G68200 | zinc finger (CCCH-type) family protein | GO:0003700|transcription factor activity;GO:0003676|nucleic acid binding;GO:0045449|regulation of transcription | GhM_A03G2009.1,GhM_D02G2046.1,GhM_A12G1852.1,GhM_A05G3685.1,GhM_D05G3637.1,GhM_D12G1789.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27440||AT5G61840 | GUT2, IRX10, ATGUT1; GUT2; catalytic/ glucuronoxylan glucuronosyltransferase||GUT1; GUT1; catalytic/ glucuronoxylan glucuronosyltransferase | GO:0012505|endomembrane system;GO:0009834|secondary cell wall biogenesis;GO:0003824|catalytic activity;GO:0010417|glucuronoxylan biosynthetic process;GO:0005794|Golgi apparatus;GO:0016020|membrane | GhM_A03G2061.1,GhM_D02G2087.1,GhM_A12G1836.1,GhM_D12G1770.1,GhM_A12G2466.1,GhM_D12G2351.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G28440 | HSL1; HSL1 (HAESA-Like 1); ATP binding / kinase/ protein serine/threonine kinase | GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004674|protein serine/threonine kinase activity | GhM_A03G2077.1,GhM_D02G2102.1,GhM_A05G1787.1,GhM_D05G1802.1,GhM_A10G0306.1,GhM_D10G0291.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G20820 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G2140.1,GhM_D02G2161.1,GhM_A04G1362.1,GhM_D04G1848.1,GhM_A13G0645.1,GhM_D13G0720.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G21890||AT4G15248 | zinc finger (B-box type) family protein||zinc ion binding | GO:0008150|biological_process;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0010224|response to UV-B;GO:0008270|zinc ion binding | GhM_A03G2184.1,GhM_D02G2205.1,GhM_A04G1388.1,GhM_D04G1877.1,GhM_A12G1748.1,GhM_D12G1699.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G23280 | TCP family transcription factor, putative | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A03G2211.1,GhM_D02G2238.1,GhM_A12G1725.1,GhM_D12G1675.1,GhM_A13G0715.1,GhM_D13G0663.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G21070||AT5G42420 | transporter-related | GO:0016020|membrane | GhM_A03G2245.1,GhM_D02G2274.1,GhM_A04G1435.1,GhM_D04G1921.1,GhM_A12G0122.1,GhM_D12G0132.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G35410||AT2G17380 | AP19; AP19; protein binding / protein transporter||clathrin adaptor complex small chain family protein | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0030117|membrane coat;GO:0006810|transport;GO:0005739|mitochondrion;GO:0006886|intracellular protein transport;GO:0030125|clathrin vesicle coat;GO:0015031|protein transport;GO:0030131|clathrin adaptor complex;GO:0030130|clathrin coat of trans-Golgi network vesicle;GO:0008565|protein transporter activity | GhM_A03G2248.1,GhM_D02G2277.1,GhM_A04G1436.1,GhM_D04G1922.1,GhM_A12G0128.1,GhM_D12G0136.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G35390||AT4G12050||AT3G55560 | AGF2; AGF2 (AT-hook protein of GA feedback 2)||AGF1; AGF1 (AT-hook protein of GA feedback 1); transcription factor||DNA-binding protein-related | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0009938|negative regulation of gibberellic acid mediated signaling pathway;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A03G2249.1,GhM_D02G2278.1,GhM_A04G1440.1,GhM_D04G1927.1,GhM_A10G2820.1,GhM_D10G2784.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64530 | ANAC104, XND1; XND1; transcription factor | GO:0048367|shoot development;GO:0012501|programmed cell death;GO:0007275|multicellular organismal development;GO:0003700|transcription factor activity;GO:0010089|xylem development;GO:0005575|cellular_component | GhM_A03G2267.1,GhM_D02G2294.1,GhM_A12G0148.1,GhM_D12G0157.1,GhM_D13G0613.1,GhM_A13G0774.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64130 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A03G2294.1,GhM_D02G2319.1,GhM_D13G0596.1,GhM_A13G0791.1,GhM_D12G0162.1,GhM_A12G0156.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64210||AT3G22370 | AOX1A, ATAOX1A; AOX1A (ALTERNATIVE OXIDASE 1A); alternative oxidase||AOX2; AOX2; alternative oxidase | GO:0006950|response to stress;GO:0005740|mitochondrial envelope;GO:0055114|oxidation reduction;GO:0005739|mitochondrion;GO:0010230|alternative respiration;GO:0045333|cellular respiration;GO:0009916|alternative oxidase activity;GO:0009409|response to cold | GhM_A03G2299.1,GhM_D02G2325.1,GhM_A04G1476.1,GhM_D04G1967.1,GhM_A12G3361.1,GhM_D12G3246.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G23970 | defense-related protein, putative | GO:0012505|endomembrane system;GO:0006952|defense response | GhM_A03G2359.1,GhM_D02G2377.1,GhM_A04G1509.1,GhM_D04G1998.1,GhM_A13G0557.1,GhM_D13G0542.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G04305 | magnesium transporter CorA-like protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G2367.1,GhM_D02G2386.1,GhM_A04G1516.1,GhM_D04G2001.1,GhM_A13G0546.1,GhM_D13G0531.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G34350 | CLB6, ISPH, HDR; HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE); 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/ 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | GO:0009507|chloroplast;GO:0046677|response to antibiotic;GO:0051745|4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity;GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009570|chloroplast stroma;GO:0046429|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | GhM_A03G2388.1,GhM_D02G2404.1,GhM_A12G0196.1,GhM_D12G0203.1,GhM_A13G0529.1,GhM_D13G0513.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G15280 | reticulon family protein (RTNLB10) | GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A03G2451.1,GhM_D02G2474.1,GhM_A12G0241.1,GhM_D12G0247.1,GhM_A13G0481.1,GhM_D13G0469.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G19290||AT4G34000 | ABF4, AREB2; ABF4 (ABRE BINDING FACTOR 4); DNA binding / protein binding / transcription activator/ transcription factor||ABF3, DPBF5; ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor | GO:0006950|response to stress;GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway | GhM_A03G2476.1,GhM_D02G2496.1,GhM_A13G0449.1,GhM_A12G0258.1,GhM_D12G0269.1,GhM_D13G0440.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G33990 | EMB2758; EMB2758 (embryo defective 2758) | GO:0009793|embryonic development ending in seed dormancy;GO:0005739|mitochondrion | GhM_A03G2477.1,GhM_D02G2497.1,GhM_A08G2428.1,GhM_D08G2374.1,GhM_D05G0979.1,GhM_D08G2373.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G19270 | CYP707A4; CYP707A4; (+)-abscisic acid 8'-hydroxylase/ oxygen binding | GO:0019825|oxygen binding;GO:0010295|(+)-abscisic acid 8'-hydroxylase activity | GhM_A03G2481.1,GhM_D02G2502.1,GhM_A13G0445.1,GhM_D13G0435.1,GhM_A05G2272.1,GhM_D05G2289.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G19090 | RNA-binding protein, putative | GO:0003723|RNA binding;GO:0030529|ribonucleoprotein complex;GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0006396|RNA processing | GhM_A03G2503.1,GhM_D02G2526.1,GhM_A12G0279.1,GhM_D12G0285.1,GhM_A13G0419.1,GhM_D13G0402.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G34450 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0009507|chloroplast;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005198|structural molecule activity;GO:0016020|membrane | GhM_A03G2534.1,GhM_D02G2560.1,GhM_A12G0306.1,GhM_D12G0307.1,GhM_A13G0385.1,GhM_D13G0371.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G34480||AT2G16230 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | GhM_A03G2536.1,GhM_D02G2562.1,GhM_A09G1033.1,GhM_D09G0968.1,GhM_D05G2200.1,GhM_A05G2175.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G16250 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0009505|plant-type cell wall;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G2542.1,GhM_D02G2569.1,GhM_A12G0312.1,GhM_D12G0312.1,GhM_A13G0380.1,GhM_D13G0366.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39200 | 40S ribosomal protein S25 (RPS25E) | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A03G2554.1,GhM_A04G1620.1,GhM_D02G2581.1,GhM_D01G0051.1,GhM_D04G2100.1,GhM_D12G0321.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G34700 | complex 1 family protein / LVR family protein | GO:0003824|catalytic activity;GO:0009853|photorespiration;GO:0045271|respiratory chain complex I;GO:0005886|plasma membrane;GO:0031966|mitochondrial membrane | GhM_A03G2591.1,GhM_D02G2618.1,GhM_A12G0453.1,GhM_D12G0342.1,GhM_A13G1101.1,GhM_D13G1116.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19840||AT1G75590 | auxin-responsive family protein | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_A03G2598.1,GhM_D02G2624.1,GhM_A12G0447.1,GhM_D12G0346.1,GhM_A13G1088.1,GhM_D13G1129.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G21860||AT4G04830 | ATMSRB5; methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein||MSRB2; MSRB2 (methionine sulfoxide reductase B 2); peptide-methionine-(S)-S-oxide reductase | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0009570|chloroplast stroma;GO:0005829|cytosol;GO:0008113|peptide-methionine-(S)-S-oxide reductase activity | GhM_A03G2736.1,GhM_D02G2752.1,GhM_A09G2831.1,GhM_D09G2707.1,GhM_A12G0342.1,GhM_D12G0453.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G55290 | ATP synthase subunit H family protein | GO:0015991|ATP hydrolysis coupled proton transport;GO:0015078|hydrogen ion transmembrane transporter activity;GO:0005773|vacuole | GhM_A04G0112.1,GhM_A08G0331.1,GhM_A13G1844.1,GhM_D08G0314.1,GhM_D05G4294.1,GhM_D13G1730.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G26910 | 2-oxoacid dehydrogenase family protein | GO:0008152|metabolic process;GO:0005739|mitochondrion;GO:0008415|acyltransferase activity;GO:0006099|tricarboxylic acid cycle;GO:0016020|membrane;GO:0008270|zinc ion binding | GhM_A04G0134.1,GhM_D05G4269.1,GhM_A08G0324.1,GhM_A06G1976.1,GhM_D06G1958.1,GhM_D08G0307.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G20560 | ATPDIL5-3, PDI12, ATPDI12; ATPDIL5-3 (PDI-LIKE 5-3); protein disulfide isomerase | GO:0045454|cell redox homeostasis;GO:0003756|protein disulfide isomerase activity | GhM_A04G0201.1,GhM_D05G4179.1,GhM_A08G0282.1,GhM_D08G0272.1,GhM_A13G1899.1,GhM_D13G1793.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G11430 | plastid developmental protein DAG, putative | GO:0009570|chloroplast stroma;GO:0009941|chloroplast envelope;GO:0009507|chloroplast | GhM_A04G0231.1,GhM_A11G3527.1,GhM_A08G0289.1,GhM_D08G0279.1,GhM_D05G4157.1,GhM_D11G3449.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G54190||AT1G03630 | PORA; PORA; oxidoreductase/ protochlorophyllide reductase||POR C, PORC; POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE); NADPH dehydrogenase/ oxidoreductase/ protochlorophyllide reductase | GO:0015995|chlorophyll biosynthetic process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003959|NADPH dehydrogenase activity;GO:0016630|protochlorophyllide reductase activity;GO:0009535|chloroplast thylakoid membrane;GO:0016491|oxidoreductase activity | GhM_A04G0278.1,GhM_D05G4110.1,GhM_A04G1355.1,GhM_D04G1841.1,GhM_A13G1950.1,GhM_D13G1846.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15360||AT4G03520 | ATHM2; ATHM2; enzyme activator||ATHM4, TRX-M4, ATM4; TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4); enzyme activator | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008047|enzyme activator activity;GO:0006979|response to oxidative stress;GO:0009579|thylakoid;GO:0009570|chloroplast stroma;GO:0005618|cell wall;GO:0009535|chloroplast thylakoid membrane;GO:0043085|positive regulation of catalytic activity | GhM_A04G0295.1,GhM_D05G4092.1,GhM_A13G1953.1,GhM_D13G1850.1,GhM_A04G1345.1,GhM_D04G1829.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G38890 | dihydrouridine synthase family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0055114|oxidation reduction;GO:0017150|tRNA dihydrouridine synthase activity;GO:0008033|tRNA processing;GO:0050660|FAD binding;GO:0005773|vacuole | GhM_A04G0298.1,GhM_A12G1405.1,GhM_A07G2023.1,GhM_D08G0719.1,GhM_A13G1092.1,GhM_D13G1125.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64710||AT5G09840 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion | GhM_A04G0389.1,GhM_D11G2592.1,GhM_A11G2656.1,GhM_A11G3121.1,GhM_D11G3059.1,GhM_A11G3122.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G05990 | MOD1, ENR1; MOD1 (MOSAIC DEATH 1); enoyl-[acyl-carrier-protein] reductase (NADH)/ enoyl-[acyl-carrier-protein] reductase/ oxidoreductase | GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0004318|enoyl-[acyl-carrier-protein] reductase (NADH) activity;GO:0006633|fatty acid biosynthetic process;GO:0016631|enoyl-[acyl-carrier-protein] reductase activity;GO:0005835|fatty acid synthase complex;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0016491|oxidoreductase activity | GhM_A04G0662.1,GhM_D04G1080.1,GhM_A08G0188.1,GhM_D08G0177.1,GhM_A13G2778.1,GhM_D13G2667.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G61520 | LHCA3; LHCA3; chlorophyll binding | GO:0009507|chloroplast;GO:0016168|chlorophyll binding;GO:0009579|thylakoid;GO:0030076|light-harvesting complex;GO:0010287|plastoglobule;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0009765|photosynthesis, light harvesting;GO:0015979|photosynthesis | GhM_A04G0752.1,GhM_A11G1720.1,GhM_A09G1400.1,GhM_D11G1708.1,GhM_A11G3138.1,GhM_A13G2007.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G36350 | protein kinase, putative | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A04G0770.1,GhM_D04G1288.1,GhM_A09G1737.1,GhM_D09G1664.1,GhM_A11G4042.1,GhM_D11G3937.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G21000||AT1G76590 | zinc-binding family protein | GO:0008150|biological_process;GO:0005488|binding | GhM_A04G0903.1,GhM_D04G1353.1,GhM_A07G1272.1,GhM_D07G1251.1,GhM_A09G1801.1,GhM_D09G1692.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G37160||AT3G53390 | transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0005575|cellular_component | GhM_A04G0981.1,GhM_D04G1438.1,GhM_A09G1879.1,GhM_D09G1775.1,GhM_A13G0282.1,GhM_D13G0267.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G18070 | EF-1-alpha-related GTP-binding protein, putative | GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0006415|translational termination;GO:0003747|translation release factor activity;GO:0005773|vacuole | GhM_A04G0991.1,GhM_A13G1242.1,GhM_A11G0101.1,GhM_A12G1104.1,GhM_D10G1948.1,GhM_A12G0595.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G39730 | RCA; RCA (RUBISCO ACTIVASE); ADP binding / ATP binding / enzyme regulator/ ribulose-1,5-bisphosphate carboxylase/oxygenase activator | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0030234|enzyme regulator activity;GO:0046863|ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity;GO:0005634|nucleus;GO:0005524|ATP binding;GO:0010319|stromule;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009416|response to light stimulus;GO:0010287|plastoglobule;GO:0043531|ADP binding;GO:0005618|cell wall;GO:0016020|membrane;GO:0042742|defense response to bacterium;GO:0009535|chloroplast thylakoid membrane;GO:0009409|response to cold | GhM_A04G1098.1,GhM_D04G1559.1,GhM_A06G2171.1,GhM_D06G2152.1,GhM_A10G2818.1,GhM_D10G2782.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G39770 | CYT1, VTC1, SOZ1, EMB101, GMP1; CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase | GO:0004475|mannose-1-phosphate guanylyltransferase activity;GO:0009058|biosynthetic process;GO:0019853|L-ascorbic acid biosynthetic process;GO:0010193|response to ozone;GO:0016779|nucleotidyltransferase activity;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0030244|cellulose biosynthetic process;GO:0009753|response to jasmonic acid stimulus;GO:0042742|defense response to bacterium | GhM_A04G1106.1,GhM_D04G1568.1,GhM_A05G4165.1,GhM_A10G2833.1,GhM_D10G2798.1,GhM_D04G0763.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G02040 | PRA1.A1; PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1) | GO:0016192|vesicle-mediated transport;GO:0005783|endoplasmic reticulum;GO:0003674|molecular_function | GhM_A04G1116.1,GhM_D04G1582.1,GhM_A09G1911.1,GhM_D09G1809.1,GhM_A13G1070.1,GhM_D13G1147.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G37980 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A04G1145.1,GhM_D04G1614.1,GhM_A09G2012.1,GhM_D09G1913.1,GhM_A11G4120.1,GhM_D11G4010.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38040 | CAC3; CAC3; acetyl-CoA carboxylase | GO:0003989|acetyl-CoA carboxylase activity;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009317|acetyl-CoA carboxylase complex;GO:0006633|fatty acid biosynthetic process;GO:0009570|chloroplast stroma;GO:0016020|membrane | GhM_A04G1152.1,GhM_D04G1620.1,GhM_A13G1114.1,GhM_D13G1109.1,GhM_A13G1113.1,GhM_A13G1115.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G38110 | ATGPAT6, GPAT6; GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase | GO:0008152|metabolic process;GO:0010143|cutin biosynthetic process;GO:0009908|flower development;GO:0008415|acyltransferase activity;GO:0003841|1-acylglycerol-3-phosphate O-acyltransferase activity | GhM_A04G1166.1,GhM_D04G1636.1,GhM_A09G2025.1,GhM_D09G1927.1,GhM_A13G1109.1,GhM_D13G1110.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G40070 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 94255 Blast hits to 49644 proteins in 1573 species: Archae - 225; Bacteria - 11215; Metazoa - 37735; Fungi - 21320; Plants - 3339; Viruses - 2662; Other Eukaryotes - 17759 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G1171.1,GhM_D04G1644.1,GhM_A05G3892.1,GhM_D04G0802.1,GhM_A10G2943.1,GhM_D10G2904.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G32300 | UCC1; UCC1 (UCLACYANIN 1); copper ion binding / electron carrier | GO:0031225|anchored to membrane;GO:0005507|copper ion binding;GO:0009055|electron carrier activity | GhM_A04G1387.1,GhM_D04G1876.1,GhM_A12G1749.1,GhM_D12G1700.1,GhM_A13G0673.1,GhM_D13G0696.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G20015 | aspartic-type endopeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A04G1418.1,GhM_D04G1903.1,GhM_A13G0731.1,GhM_D13G0650.1,GhM_D12G1672.1,GhM_A12G1722.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G23450 | ATLCBK1; ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1); D-erythro-sphingosine kinase/ diacylglycerol kinase | GO:0017050|D-erythro-sphingosine kinase activity;GO:0007205|activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;GO:0004143|diacylglycerol kinase activity;GO:0030148|sphingolipid biosynthetic process;GO:0005886|plasma membrane | GhM_A04G1430.1,GhM_D04G1916.1,GhM_A12G0117.1,GhM_D12G0127.1,GhM_A13G0738.1,GhM_D13G0643.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G34040 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A04G1572.1,GhM_D04G2048.1,GhM_D13G0447.1,GhM_A12G0250.1,GhM_D12G0260.1,GhM_A13G0456.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39150 | DNAJ heat shock N-terminal domain-containing protein | GO:0051082|unfolded protein binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A04G1617.1,GhM_D04G2097.1,GhM_A12G0469.1,GhM_D12G0326.1,GhM_A13G0368.1,GhM_D13G0352.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G17130||AT4G35260 | IDH2; IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2); isocitrate dehydrogenase (NAD+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor||IDH1; IDH1 (ISOCITRATE DEHYDROGENASE 1); isocitrate dehydrogenase (NAD+)/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0008152|metabolic process;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0004449|isocitrate dehydrogenase (NAD+) activity;GO:0005739|mitochondrion;GO:0006099|tricarboxylic acid cycle;GO:0008270|zinc ion binding | GhM_A04G1649.1,GhM_D04G2133.1,GhM_A12G0361.1,GhM_D12G0435.1,GhM_A12G0657.1,GhM_D12G0657.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09660 | KH domain-containing quaking protein, putative | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A04G1758.1,GhM_D04G2236.1,GhM_A12G0493.1,GhM_D12G0488.1,GhM_D10G2986.1,GhM_D10G2987.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G60810||AT1G09430 | ACLA-3; ACLA-3; ATP citrate synthase||ACLA-2; ACLA-2; ATP citrate synthase | GO:0009346|citrate lyase complex;GO:0003878|ATP citrate synthase activity;GO:0006085|acetyl-CoA biosynthetic process | GhM_A04G1787.1,GhM_D04G2262.1,GhM_A11G3449.1,GhM_D11G3361.1,GhM_A12G1882.1,GhM_D12G1812.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G14530||AT2G02180 | THH1; THH1 (TOM THREE HOMOLOG 1); virion binding||TOM3; TOM3; protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0012505|endomembrane system;GO:0046786|viral replication complex formation and maintenance;GO:0046790|virion binding;GO:0005575|cellular_component | GhM_A04G1885.1,GhM_D04G2358.1,GhM_A12G2019.1,GhM_D12G1928.1,GhM_A13G0291.1,GhM_D13G0278.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G57690||AT4G30340 | ATDGK4, DGK4; diacylglycerol kinase||ATDGK7; ATDGK7 (Diacylglycerol kinase 7); diacylglycerol kinase | GO:0048364|root development;GO:0009507|chloroplast;GO:0007205|activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;GO:0004143|diacylglycerol kinase activity;GO:0048366|leaf development;GO:0005886|plasma membrane | GhM_A05G0077.1,GhM_D05G0081.1,GhM_A08G3032.1,GhM_D08G2964.1,GhM_A13G2739.1,GhM_D13G2632.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G15680 | zinc finger (Ran-binding) family protein | GO:0008150|biological_process;GO:0005488|binding;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A05G0108.1,GhM_D05G0111.1,GhM_A05G1386.1,GhM_D05G1396.1,GhM_A06G2420.1,GhM_D06G2418.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A05G0111.1,GhM_D05G0114.1,GhM_D05G0215.1,GhM_A05G0211.1,GhM_A06G0688.1,GhM_D06G0696.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G24350 | SYP32, ATSYP32; SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor | GO:0006886|intracellular protein transport;GO:0016020|membrane;GO:0006944|cellular membrane fusion;GO:0005484|SNAP receptor activity | GhM_A05G0122.1,GhM_D05G0128.1,GhM_A06G0556.1,GhM_D06G0565.1,GhM_A13G2660.1,GhM_D13G2564.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G11090||AT5G25280 | serine-rich protein-related | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G0138.1,GhM_D05G0146.1,GhM_A06G0597.1,GhM_D06G0601.1,GhM_A08G1168.1,GhM_D08G1141.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G52580 | RAB GTPase activator | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity | GhM_A05G0160.1,GhM_D05G0168.1,GhM_A06G0636.1,GhM_D06G0631.1,GhM_A08G3066.1,GhM_D08G2996.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G28640||AT4G32280 | IAA11; IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor||IAA29; IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29); transcription factor | GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010114|response to red light;GO:0010218|response to far red light;GO:0010583|response to cyclopentenone;GO:0003700|transcription factor activity | GhM_A05G0161.1,GhM_D05G0169.1,GhM_A06G0637.1,GhM_D06G0632.1,GhM_D07G0469.1,GhM_A07G0474.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G17486 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0202.1,GhM_D05G0208.1,GhM_A07G0026.1,GhM_D07G0031.1,GhM_A13G2611.1,GhM_D13G2509.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G13350 | NIG; NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase | GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0009615|response to virus;GO:0005737|cytoplasm;GO:0006913|nucleocytoplasmic transport;GO:0005829|cytosol | GhM_A05G0238.1,GhM_D05G0244.1,GhM_D06G0721.1,GhM_A06G0718.1,GhM_A08G3095.1,GhM_D08G3025.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G24570 | peroxisomal membrane 22 kDa family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0005778|peroxisomal membrane;GO:0016021|integral to membrane | GhM_A05G0257.1,GhM_D05G0266.1,GhM_A06G0750.1,GhM_D06G0752.1,GhM_A08G3204.1,GhM_D08G3137.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G29000 | tesmin/TSO1-like CXC domain-containing protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G0262.1,GhM_D05G0271.1,GhM_A07G0065.1,GhM_A06G0761.1,GhM_D06G0761.1,GhM_D07G0078.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G65980 | TPX1; TPX1 (thioredoxin-dependent peroxidase 1); antioxidant/ oxidoreductase | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0016209|antioxidant activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016491|oxidoreductase activity | GhM_A05G0266.1,GhM_D08G3037.1,GhM_A05G1447.1,GhM_D05G1461.1,GhM_A08G3107.1,GhM_D05G0276.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G20000 | HBT, CDC27b; HBT (HOBBIT); binding | GO:0048364|root development;GO:0030154|cell differentiation;GO:0051510|regulation of unidimensional cell growth;GO:0051301|cell division;GO:0005680|anaphase-promoting complex;GO:0005488|binding;GO:0005819|spindle;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0051302|regulation of cell division;GO:0007276|gamete generation;GO:0048829|root cap development;GO:0010071|root meristem specification;GO:0009504|cell plate;GO:0007346|regulation of mitotic cell cycle | GhM_A05G0276.1,GhM_D05G0286.1,GhM_A13G2570.1,GhM_D13G2484.1,GhM_A13G2571.1,GhM_D13G2485.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19780||AT4G29240 | leucine-rich repeat family protein / extensin family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0008150|biological_process | GhM_A05G0289.1,GhM_D05G0302.1,GhM_A06G0814.1,GhM_D06G0817.1,GhM_A13G2565.1,GhM_D13G2479.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19580 | TET2; TET2 (TETRASPANIN2) | GO:0012505|endomembrane system;GO:0007568|aging;GO:0016021|integral to membrane;GO:0003674|molecular_function | GhM_A05G0315.1,GhM_D05G0328.1,GhM_A06G0849.1,GhM_D07G0128.1,GhM_A07G0129.1,GhM_D06G0856.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19570 | CDA1, AT-CDA1, DESZ; CDA1 (CYTIDINE DEAMINASE 1); cytidine deaminase | GO:0009972|cytidine deamination;GO:0005829|cytosol;GO:0004126|cytidine deaminase activity | GhM_A05G0316.1,GhM_D05G0329.1,GhM_A08G3145.1,GhM_D08G3070.1,GhM_A13G2553.1,GhM_D13G2466.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G29670||AT4G26160 | ACHT2; thioredoxin family protein||ACHT1; ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | GO:0009507|chloroplast;GO:0045454|cell redox homeostasis;GO:0031969|chloroplast membrane;GO:0009570|chloroplast stroma;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor | GhM_A05G0317.1,GhM_D05G0330.1,GhM_A06G0851.1,GhM_D06G0859.1,GhM_D08G0697.1,GhM_A08G0734.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19520 | FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4; FVE; metal ion binding | GO:0009826|unidimensional cell growth;GO:0009965|leaf morphogenesis;GO:0005634|nucleus;GO:0010090|trichome morphogenesis;GO:0009908|flower development;GO:0005737|cytoplasm;GO:0005730|nucleolus;GO:0046872|metal ion binding | GhM_A05G0322.1,GhM_D05G0335.1,GhM_A06G0861.1,GhM_D06G0867.1,GhM_A06G2464.1,GhM_D06G2461.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G26190||AT5G57010 | calmodulin-binding family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005516|calmodulin binding;GO:0006499|N-terminal protein myristoylation | GhM_A05G0330.1,GhM_D05G0344.1,GhM_A06G0874.1,GhM_D06G0880.1,GhM_A13G2547.1,GhM_D13G2460.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G29810 | ATMKK2, MKK2, MK1; ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2); MAP kinase kinase/ kinase | GO:0009814|defense response, incompatible interaction;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0004708|MAP kinase kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0009631|cold acclimation;GO:0009409|response to cold | GhM_A05G0343.1,GhM_D05G0361.1,GhM_A06G0884.1,GhM_D06G0890.1,GhM_A07G0155.1,GhM_D07G0154.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G29840 | MTO2, TS; MTO2 (METHIONINE OVER-ACCUMULATOR 2); threonine synthase | GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0006520|cellular amino acid metabolic process;GO:0009088|threonine biosynthetic process;GO:0004795|threonine synthase activity | GhM_A05G0348.1,GhM_D05G0367.1,GhM_A06G0886.1,GhM_D06G0892.1,GhM_A10G0637.1,GhM_D10G0605.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G45310 | cysteine proteinase, putative | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A05G0368.1,GhM_D05G0387.1,GhM_A06G0913.1,GhM_D06G0922.1,GhM_A13G2520.1,GhM_D13G2431.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G42950 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | GhM_A05G0375.1,GhM_D05G0394.1,GhM_A06G0935.1,GhM_D06G0943.1,GhM_A07G0188.1,GhM_D07G0187.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G19220||AT5G20730 | ARF19, IAA22, ARF11; ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor||NPH4, MSG1, IAA21, ARF7, TIR5, BIP; NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator | GO:0030528|transcription regulator activity;GO:0016563|transcription activator activity;GO:0009630|gravitropism;GO:0010386|lateral root primordium development;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0009638|phototropism;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0048527|lateral root development;GO:0048366|leaf development;GO:0009723|response to ethylene stimulus;GO:0040008|regulation of growth | GhM_A05G0379.1,GhM_D05G0398.1,GhM_A06G0948.1,GhM_D06G0955.1,GhM_A07G0194.1,GhM_D07G0194.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G21090 | adrenodoxin-like ferredoxin 1 | GO:0051537|2 iron, 2 sulfur cluster binding;GO:0051536|iron-sulfur cluster binding;GO:0005739|mitochondrion;GO:0009055|electron carrier activity | GhM_A05G0386.1,GhM_D05G0405.1,GhM_A06G0955.1,GhM_D06G0960.1,GhM_A07G2984.1,GhM_D07G2885.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G43240 | ARID/BRIGHT DNA-binding domain-containing protein | GO:0005515|protein binding;GO:0003677|DNA binding;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A05G0397.1,GhM_D05G0415.1,GhM_A06G1015.1,GhM_D06G1002.1,GhM_A07G0204.1,GhM_D07G0204.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G12080 | MSL10; MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10); mechanically-gated ion channel | GO:0005886|plasma membrane;GO:0016020|membrane;GO:0050982|detection of mechanical stimulus;GO:0008381|mechanically-gated ion channel activity | GhM_A05G0424.1,GhM_D05G0444.1,GhM_A06G0993.1,GhM_D06G1020.1,GhM_A07G0235.1,GhM_D07G0236.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G26040 | Bet v I allergen family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0467.1,GhM_D05G0492.1,GhM_A07G0260.1,GhM_D07G0259.1,GhM_A08G3182.1,GhM_D08G3109.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19810 | zinc finger (CCCH-type) family protein | GO:0003700|transcription factor activity;GO:0003676|nucleic acid binding;GO:0045449|regulation of transcription | GhM_A05G0489.1,GhM_D05G0512.1,GhM_A07G0273.1,GhM_D07G0272.1,GhM_A08G3190.1,GhM_D08G3116.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G11700 | glycine-rich protein | GO:0005773|vacuole | GhM_A05G0490.1,GhM_D05G0513.1,GhM_A06G1096.1,GhM_D06G1107.1,GhM_A13G2481.1,GhM_D13G2376.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G37410 | ATTIM17-2, TIM17; ATTIM17-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter | GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0045039|protein import into mitochondrial inner membrane;GO:0005739|mitochondrion;GO:0005741|mitochondrial outer membrane;GO:0005744|mitochondrial inner membrane presequence translocase complex;GO:0015031|protein transport;GO:0005743|mitochondrial inner membrane;GO:0008565|protein transporter activity | GhM_A05G0498.1,GhM_D05G0520.1,GhM_A06G1106.1,GhM_D06G1118.1,GhM_A13G2480.1,GhM_D13G2375.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G27600 | glycosyl transferase family 43 protein | GO:0016020|membrane | GhM_A05G0524.1,GhM_D05G0553.1,GhM_A08G3199.1,GhM_D08G3132.1,GhM_A13G2469.1,GhM_D13G2362.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G07690 | MCM5; minichromosome maintenance family protein / MCM family protein | GO:0008094|DNA-dependent ATPase activity;GO:0005634|nucleus;GO:0006268|DNA unwinding involved in replication;GO:0005737|cytoplasm;GO:0003677|DNA binding;GO:0000790|nuclear chromatin;GO:0008283|cell proliferation;GO:0006270|DNA replication initiation;GO:0005524|ATP binding | GhM_A05G0545.1,GhM_A13G2462.1,GhM_A05G0546.1,GhM_D13G2356.1,GhM_A05G0547.1,GhM_D05G0571.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G30996 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G0557.1,GhM_D08G3142.1,GhM_A07G0335.1,GhM_D07G0334.1,GhM_A08G3209.1,GhM_D05G0580.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G58060 | YKT61, ATYKT61, ATGP1; YKT61 | GO:0016192|vesicle-mediated transport;GO:0016021|integral to membrane;GO:0006810|transport;GO:0003674|molecular_function | GhM_A05G0560.1,GhM_D05G0583.1,GhM_A07G0340.1,GhM_D07G0339.1,GhM_A08G3210.1,GhM_D08G3143.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G24270 | ALDH11A3; ALDH11A3; 3-chloroallyl aldehyde dehydrogenase/ glyceraldehyde-3-phosphate dehydrogenase (NADP+) | GO:0004028|3-chloroallyl aldehyde dehydrogenase activity;GO:0008152|metabolic process;GO:0008886|glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity | GhM_A05G0567.1,GhM_D05G0589.1,GhM_A05G0642.1,GhM_D05G0660.1,GhM_A07G0346.1,GhM_D07G0346.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G28088 | hydrophobic protein, putative / low temperature and salt responsive protein, putative | GO:0008150|biological_process | GhM_A05G0578.1,GhM_D05G0601.1,GhM_A06G1182.1,GhM_D06G1214.1,GhM_A13G2438.1,GhM_D13G2335.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G26260 | AT3BETAHSD/D2; AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2); 3-beta-hydroxy-delta5-steroid dehydrogenase/ sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) | GO:0008152|metabolic process;GO:0006694|steroid biosynthetic process;GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity;GO:0047012|sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity;GO:0016020|membrane | GhM_A05G0591.1,GhM_D05G0624.1,GhM_A06G0973.1,GhM_D05G0310.1,GhM_D06G0978.1,GhM_A06G0972.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G57970 | methyladenine glycosylase family protein | GO:0006284|base-excision repair;GO:0008725|DNA-3-methyladenine glycosylase I activity;GO:0003824|catalytic activity;GO:0006281|DNA repair | GhM_A05G0602.1,GhM_D05G0614.1,GhM_A06G1174.1,GhM_D06G1206.1,GhM_A13G2442.1,GhM_D13G2339.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G25290||AT4G32070 | binding||octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A05G0622.1,GhM_D05G0641.1,GhM_A12G1038.1,GhM_D12G1008.1,GhM_A13G2423.1,GhM_D13G2320.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G25190 | ethylene-responsive element-binding protein, putative | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A05G0632.1,GhM_D05G0649.1,GhM_A06G1233.1,GhM_D06G1255.1,GhM_A07G0395.1,GhM_D07G0393.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G25110 | CIPK25, SnRK3.25; CIPK25 (CBL-INTERACTING PROTEIN KINASE 25); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0016301|kinase activity;GO:0050832|defense response to fungus;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0647.1,GhM_D05G0667.1,GhM_A06G1247.1,GhM_D06G1268.1,GhM_A07G0406.1,GhM_D07G0404.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G31820 | ENP, NPY1, MAB4; ENP (ENHANCER OF PINOID); protein binding / signal transducer | GO:0005770|late endosome;GO:0005515|protein binding;GO:0048827|phyllome development;GO:0048825|cotyledon development;GO:0009908|flower development;GO:0009911|positive regulation of flower development;GO:0004871|signal transducer activity;GO:0045176|apical protein localization;GO:0009416|response to light stimulus;GO:0010540|basipetal auxin transport;GO:0010229|inflorescence development;GO:0005886|plasma membrane | GhM_A05G0653.1,GhM_D05G0673.1,GhM_A06G1252.1,GhM_D06G1275.1,GhM_A07G0412.1,GhM_D07G0411.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G31840||AT2G25060 | plastocyanin-like domain-containing protein | GO:0005507|copper ion binding;GO:0046658|anchored to plasma membrane;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0009055|electron carrier activity | GhM_A05G0655.1,GhM_D05G0676.1,GhM_A07G0413.1,GhM_D07G0412.1,GhM_D06G1278.1,GhM_A06G1255.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G10750 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G0678.1,GhM_D05G0697.1,GhM_A07G0425.1,GhM_D07G0424.1,GhM_A13G2403.1,GhM_D13G2302.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24970 | ABC1 family protein | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation | GhM_A05G0680.1,GhM_D05G0699.1,GhM_A05G0681.1,GhM_A06G1286.1,GhM_A05G0682.1,GhM_D06G1292.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24930 | ATCOL4, COL4; zinc finger (B-box type) family protein | GO:0009507|chloroplast;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0008270|zinc ion binding | GhM_A05G0684.1,GhM_D05G0702.1,GhM_A13G2402.1,GhM_D13G2300.1,GhM_D07G0425.1,GhM_A07G0426.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G24530 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0703.1,GhM_D05G0724.1,GhM_A06G1499.1,GhM_D06G1328.1,GhM_A07G0021.1,GhM_D07G0025.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13020 | emsy N terminus domain-containing protein / ENT domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0729.1,GhM_D05G0752.1,GhM_A08G0189.1,GhM_D08G0178.1,GhM_A13G2780.1,GhM_D13G2669.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G20830 | protein kinase family protein | GO:0016301|kinase activity;GO:0009507|chloroplast;GO:0006468|protein amino acid phosphorylation | GhM_A05G0747.1,GhM_D05G0771.1,GhM_A07G1520.1,GhM_D07G1488.1,GhM_A08G0191.1,GhM_D08G0181.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G30440 | phototropic-responsive NPH3 family protein | GO:0009416|response to light stimulus;GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0004871|signal transducer activity | GhM_A05G0772.1,GhM_D09G1345.1,GhM_A09G1434.1,GhM_D05G0797.1,GhM_D05G0795.1,GhM_D05G0796.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G51510 | Y14; Y14; RNA binding / protein binding | GO:0003723|RNA binding;GO:0005515|protein binding;GO:0005737|cytoplasm;GO:0005730|nucleolus;GO:0016604|nuclear body;GO:0035145|exon-exon junction complex;GO:0006396|RNA processing;GO:0005654|nucleoplasm | GhM_A05G0807.1,GhM_D05G0829.1,GhM_A09G1427.1,GhM_D09G1338.1,GhM_A13G2819.1,GhM_D13G2704.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G45240 | GRIK1, ATSNAK2; GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1); kinase | GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A05G0815.1,GhM_D05G0837.1,GhM_A07G1425.1,GhM_D07G1406.1,GhM_A08G0143.1,GhM_D08G0132.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G22000 | RHF2A; RHF2A (RING-H2 GROUP F2A); protein binding / zinc ion binding | GO:0051603|proteolysis involved in cellular protein catabolic process;GO:0009561|megagametogenesis;GO:0051726|regulation of cell cycle;GO:0055046|microgametogenesis | GhM_A05G0848.1,GhM_D05G0869.1,GhM_A07G1374.1,GhM_D07G1352.1,GhM_A08G0127.1,GhM_D08G0116.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G44220 | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0869.1,GhM_D05G0886.1,GhM_A07G1352.1,GhM_D07G1331.1,GhM_A09G1292.1,GhM_D09G1225.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G27690 | CYP94C1; CYP94C1; fatty acid (omega-1)-hydroxylase/ oxygen binding | GO:0008393|fatty acid (omega-1)-hydroxylase activity;GO:0005792|microsome;GO:0019825|oxygen binding | GhM_A05G0910.1,GhM_D05G0928.1,GhM_A08G0100.1,GhM_D08G0085.1,GhM_A09G1253.1,GhM_D09G1184.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G27770 | unknown protein | GO:0009507|chloroplast | GhM_A05G0924.1,GhM_D05G0943.1,GhM_A07G1298.1,GhM_D07G1276.1,GhM_A09G1242.1,GhM_D09G1172.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G46740 | TOC75-III; TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0045036|protein targeting to chloroplast;GO:0031359|integral to chloroplast outer membrane;GO:0009658|chloroplast organization;GO:0005886|plasma membrane;GO:0010006|toc complex;GO:0016020|membrane;GO:0048598|embryonic morphogenesis | GhM_A05G1027.1,GhM_D05G1038.1,GhM_A07G1204.1,GhM_D07G1190.1,GhM_A13G2906.1,GhM_D13G2805.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G55370||AT1G07640 | OBP2; OBP2; DNA binding / transcription factor||OBP3; OBP3 (OBF-BINDING PROTEIN 3); DNA binding / transcription factor | GO:0009640|photomorphogenesis;GO:0019761|glucosinolate biosynthetic process;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009611|response to wounding;GO:0045941|positive regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0009625|response to insect | GhM_A05G1058.1,GhM_D05G1071.1,GhM_A07G1171.1,GhM_D07G1155.1,GhM_D08G0049.1,GhM_A08G0060.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G07705 | transcription regulator | GO:0005634|nucleus;GO:0009507|chloroplast;GO:0030528|transcription regulator activity;GO:0045449|regulation of transcription | GhM_A05G1088.1,GhM_D05G1101.1,GhM_A08G0042.1,GhM_D08G0033.1,GhM_A13G2935.1,GhM_D13G2836.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G10350 | anion-transporting ATPase family protein | GO:0006875|cellular metal ion homeostasis;GO:0006820|anion transport;GO:0009507|chloroplast;GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A05G1164.1,GhM_D05G1183.1,GhM_A05G3358.1,GhM_D05G3332.1,GhM_A10G2595.1,GhM_D10G2509.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G57620||AT3G49690 | RAX3, MYB84, ATMYB84; MYB84 (MYB DOMAIN PROTEIN 84); DNA binding / transcription factor||MYB36, AtMYB36; MYB36 (myb domain protein 36); DNA binding / transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G1176.1,GhM_D05G1195.1,GhM_A06G0284.1,GhM_D06G0285.1,GhM_A08G2588.1,GhM_D08G2530.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G21160||AT4G05330 | ZAC, AGD12; ZAC; ARF GTPase activator/ phospholipid binding||AGD13; AGD13 (ARF-GAP domain 13); ARF GTPase activator/ zinc ion binding | GO:0032312|regulation of ARF GTPase activity;GO:0008060|ARF GTPase activator activity;GO:0006886|intracellular protein transport;GO:0008270|zinc ion binding;GO:0005794|Golgi apparatus;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005543|phospholipid binding;GO:0005773|vacuole | GhM_A05G1220.1,GhM_D05G1240.1,GhM_A06G2682.1,GhM_D06G2669.1,GhM_A10G0057.1,GhM_D10G0044.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G20380 | LSD1; zinc finger protein (LSD1) | GO:0001666|response to hypoxia;GO:0010602|regulation of 1-aminocyclopropane-1-carboxylate metabolic process;GO:0010618|aerenchyma formation;GO:0002240|response to molecule of oomycetes origin;GO:0009626|plant-type hypersensitive response;GO:0043067|regulation of programmed cell death;GO:0003700|transcription factor activity;GO:0010310|regulation of hydrogen peroxide metabolic process;GO:0008219|cell death;GO:0010104|regulation of ethylene mediated signaling pathway;GO:0000303|response to superoxide;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway | GhM_A05G1231.1,GhM_D05G1251.1,GhM_A06G2677.1,GhM_D06G2665.1,GhM_A10G0065.1,GhM_D10G0052.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G80690||AT5G25170 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1330.1,GhM_D05G1346.1,GhM_A06G1239.1,GhM_D06G1261.1,GhM_A13G2417.1,GhM_D13G2316.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G25360 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1395.1,GhM_D05G1405.1,GhM_A10G0823.1,GhM_D10G0819.1,GhM_A09G1144.1,GhM_D09G1070.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G13860||AT3G23990 | HSP60-3A; HSP60-3A (HEAT SHOCK PROTEIN 60-3A); ATP binding / protein binding||HSP60, HSP60-3B; HSP60 (HEAT SHOCK PROTEIN 60); ATP binding | GO:0005759|mitochondrial matrix;GO:0005515|protein binding;GO:0022626|cytosolic ribosome;GO:0005507|copper ion binding;GO:0046686|response to cadmium ion;GO:0007005|mitochondrion organization;GO:0005739|mitochondrion;GO:0009408|response to heat;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0051131|chaperone-mediated protein complex assembly;GO:0005524|ATP binding | GhM_A05G1511.1,GhM_D05G1526.1,GhM_A09G2454.1,GhM_D09G2341.1,GhM_A11G1587.1,GhM_D11G1582.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G17620 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11890.1); Has 539 Blast hits to 538 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 539; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005886|plasma membrane | GhM_A05G1512.1,GhM_D05G1527.1,GhM_A10G0650.1,GhM_D10G0619.1,GhM_A06G2470.1,GhM_D06G2468.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G19460||AT5G11970 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1522.1,GhM_D05G1538.1,GhM_A05G4840.1,GhM_D04G0112.1,GhM_A10G0643.1,GhM_D10G0612.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G72830 | HAP2C, ATHAP2C, NF-YA3; NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor | GO:0003700|transcription factor activity;GO:0016602|CCAAT-binding factor complex;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G1536.1,GhM_D05G1550.1,GhM_A10G0583.1,GhM_A05G4834.1,GhM_D04G0117.1,GhM_D10G0558.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G14172 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 2665 Blast hits to 1956 proteins in 215 species: Archae - 2; Bacteria - 189; Metazoa - 878; Fungi - 141; Plants - 132; Viruses - 5; Other Eukaryotes - 1318 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1549.1,GhM_D05G1563.1,GhM_A10G0577.1,GhM_D10G0553.1,GhM_A10G0578.1,GhM_A10G0579.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G14110 | FLU; FLU (FLUORESCENT IN BLUE LIGHT); binding | GO:0015995|chlorophyll biosynthetic process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0000304|response to singlet oxygen;GO:0031408|oxylipin biosynthetic process;GO:0005488|binding;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A05G1552.1,GhM_D05G1566.1,GhM_A06G2492.1,GhM_D06G2490.1,GhM_D08G1057.1,GhM_D07G1020.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G53900||AT1G72340||AT3G14260 | unknown protein||eukaryotic translation initiation factor 2B family protein / eIF-2B family protein||GTP binding / translation initiation factor | GO:0005851|eukaryotic translation initiation factor 2B complex;GO:0008150|biological_process;GO:0005525|GTP binding;GO:0003743|translation initiation factor activity;GO:0003674|molecular_function;GO:0044237|cellular metabolic process;GO:0006413|translational initiation;GO:0005575|cellular_component | GhM_A05G1579.1,GhM_D05G1593.1,GhM_A06G2499.1,GhM_D06G2496.1,GhM_D04G2313.1,GhM_D05G1594.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G53730 | SRF6; SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G1593.1,GhM_D05G1607.1,GhM_A06G1874.1,GhM_D06G1869.1,GhM_A10G0549.1,GhM_D10G0524.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G35640 | hydroxyproline-rich glycoprotein family protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A05G1608.1,GhM_D05G1623.1,GhM_A06G1842.1,GhM_D06G1855.1,GhM_D10G0489.1,GhM_A10G0515.1 | 6 | 0 | Gossypium | Cotton | |||
| - | ATCG01040 | YCF5; hypothetical protein | GO:0012505|endomembrane system;GO:0008535|respiratory chain complex IV assembly;GO:0016020|membrane;GO:0006461|protein complex assembly | GhM_A05G1651.1,GhM_D08G1642.1,GhM_A07G1593.1,GhM_D03G0925.1,GhM_D01G1711.1,GhM_D05G3568.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G30135 | JAZ8, TIFY5A; JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_A05G1652.1,GhM_D05G1662.1,GhM_A10G0462.1,GhM_A09G1054.1,GhM_D09G0989.1,GhM_D10G0443.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G34590 | transketolase family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0004739|pyruvate dehydrogenase (acetyl-transferring) activity;GO:0048868|pollen tube development;GO:0004802|transketolase activity;GO:0008270|zinc ion binding | GhM_A05G1653.1,GhM_D05G1663.1,GhM_A06G1817.1,GhM_D06G1800.1,GhM_A06G2520.1,GhM_D06G2514.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G18975 | pentatricopeptide (PPR) repeat-containing protein | GO:0012505|endomembrane system | GhM_A05G1703.1,GhM_D05G1715.1,GhM_A05G1704.1,GhM_A06G1892.1,GhM_D06G1887.1,GhM_D04G0375.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29670||AT1G29660 | GDSL-motif lipase/hydrolase family protein | GO:0009507|chloroplast;GO:0016788|hydrolase activity, acting on ester bonds;GO:0005634|nucleus;GO:0006629|lipid metabolic process;GO:0048046|apoplast;GO:0005618|cell wall;GO:0004091|carboxylesterase activity | GhM_A05G1707.1,GhM_D05G1718.1,GhM_A06G2542.1,GhM_D06G2535.1,GhM_A10G0352.1,GhM_D10G0340.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29300 | UNE1; UNE1 (unfertilized embryo sac 1) | GO:0009567|double fertilization forming a zygote and endosperm | GhM_A05G1720.1,GhM_D05G1729.1,GhM_A05G3562.1,GhM_D05G3521.1,GhM_A06G2550.1,GhM_D06G2543.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29280 | WRKY65, ATWRKY65; WRKY65; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G1725.1,GhM_D05G1735.1,GhM_A06G1724.1,GhM_D06G1739.1,GhM_A10G0374.1,GhM_D10G0362.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G18760 | AtRLP51; AtRLP51 (Receptor Like Protein 51); protein binding | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0007165|signal transduction | GhM_A05G1734.1,GhM_D05G1742.1,GhM_A06G1716.1,GhM_D06G1735.1,GhM_A10G0379.1,GhM_D10G0368.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G34150||AT1G29170 | WAVE2, ATSCAR3, SCAR3; WAVE2||WAVE1, ATRANGAP2, ATSCAR1, SCAR1; WAVE1; actin monomer binding | GO:0003785|actin monomer binding;GO:0003674|molecular_function;GO:0051127|positive regulation of actin nucleation;GO:0031209|SCAR complex | GhM_A05G1746.1,GhM_D05G1757.1,GhM_A05G1747.1,GhM_D10G0389.1,GhM_A10G0401.1,GhM_D10G0390.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29160 | Dof-type zinc finger domain-containing protein | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0045449|regulation of transcription | GhM_A05G1748.1,GhM_D05G1758.1,GhM_A06G1703.1,GhM_D06G1720.1,GhM_A10G0402.1,GhM_D10G0391.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09310 | unknown protein | GO:0008150|biological_process;GO:0048046|apoplast | GhM_A05G1753.1,GhM_D05G1764.1,GhM_A06G2559.1,GhM_D06G2552.1,GhM_A09G0026.1,GhM_D09G0018.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G33860 | ETT, ARF3; ETT (ETTIN); DNA binding / transcription factor | GO:0010050|vegetative phase change;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010158|abaxial cell fate specification;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009850|auxin metabolic process | GhM_A05G1783.1,GhM_D05G1798.1,GhM_A06G1754.1,GhM_D06G1696.1,GhM_D10G0296.1,GhM_A10G0311.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G20980 | eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | GO:0009507|chloroplast;GO:0006413|translational initiation;GO:0003743|translation initiation factor activity | GhM_A05G1813.1,GhM_D05G1827.1,GhM_A06G1597.1,GhM_D06G1652.1,GhM_A10G0286.1,GhM_D10G0270.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G61105 | disease resistance protein-related | GO:0004888|transmembrane receptor activity;GO:0007165|signal transduction;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response | GhM_A05G1830.1,GhM_D05G1845.1,GhM_A06G1657.1,GhM_D06G1614.1,GhM_D10G0237.1,GhM_A10G0252.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G61215 | BRD4; BRD4 (BROMODOMAIN 4); DNA binding | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A05G1844.1,GhM_D05G1856.1,GhM_D10G0228.1,GhM_A06G1641.1,GhM_D06G1606.1,GhM_A10G0243.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G61240 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1845.1,GhM_D05G1857.1,GhM_A06G2597.1,GhM_D06G2588.1,GhM_A10G0242.1,GhM_D10G0227.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G57580 | calmodulin-binding protein | GO:0008150|biological_process;GO:0005516|calmodulin binding;GO:0005575|cellular_component | GhM_A05G1865.1,GhM_D05G1875.1,GhM_A06G2600.1,GhM_D06G2591.1,GhM_D10G0211.1,GhM_A10G0226.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G11260 | STP1, ATSTP1; STP1 (SUGAR TRANSPORTER 1); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005634|nucleus;GO:0055085|transmembrane transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0005773|vacuole | GhM_A05G1871.1,GhM_D05G1881.1,GhM_A06G1631.1,GhM_D06G1595.1,GhM_A10G0234.1,GhM_D10G0219.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G05150 | octicosapeptide/Phox/Bem1p (PB1) domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1877.1,GhM_D05G1887.1,GhM_A06G1615.1,GhM_D06G1583.1,GhM_A06G2604.1,GhM_D06G2595.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G03270 | CYCD6;1; CYCD6;1 (Cyclin D6;1); cyclin-dependent protein kinase | GO:0005634|nucleus;GO:0051726|regulation of cell cycle;GO:0004693|cyclin-dependent protein kinase activity | GhM_A05G1878.1,GhM_D05G1888.1,GhM_A06G1614.1,GhM_D06G1582.1,GhM_A10G0212.1,GhM_D10G0198.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G05180 | PSBQ, PSBQ-2, PSII-Q; PSBQ-2; calcium ion binding | GO:0009507|chloroplast;GO:0005509|calcium ion binding;GO:0031977|thylakoid lumen;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid | GhM_A05G1887.1,GhM_D05G1900.1,GhM_A06G1548.1,GhM_D06G1560.1,GhM_A10G0186.1,GhM_D10G0174.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G61790 | OST3/OST6 family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0015157|oligosaccharide transmembrane transporter activity;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | GhM_A05G1896.1,GhM_D05G1908.1,GhM_A06G1928.1,GhM_D06G1916.1,GhM_D09G0897.1,GhM_A09G0965.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G62360 | STM, BUM1, SHL, WAM1, BUM, WAM; STM (SHOOT MERISTEMLESS); transcription factor | GO:0019827|stem cell maintenance;GO:0009691|cytokinin biosynthetic process;GO:0005634|nucleus;GO:0009934|regulation of meristem structural organization;GO:0003700|transcription factor activity;GO:0048440|carpel development | GhM_A05G1947.1,GhM_D05G1957.1,GhM_A06G1999.1,GhM_D06G1982.1,GhM_A10G0121.1,GhM_D10G0106.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G22290 | ubiquitin thiolesterase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004221|ubiquitin thiolesterase activity | GhM_A05G1952.1,GhM_D05G1962.1,GhM_A06G2016.1,GhM_D06G2000.1,GhM_A10G0112.1,GhM_D10G0097.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G47540 | binding | GO:0008150|biological_process;GO:0005488|binding | GhM_A05G1965.1,GhM_D05G1976.1,GhM_A06G2041.1,GhM_D06G2022.1,GhM_A10G0101.1,GhM_D10G0085.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66190 | ATLFNR1, FNR1; FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1); NADPH dehydrogenase/ electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis/ electron transporter, transferring electrons within the noncyclic electron transp | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0031977|thylakoid lumen;GO:0045157|electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity;GO:0008266|poly(U) RNA binding;GO:0055114|oxidation reduction;GO:0045156|electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0003959|NADPH dehydrogenase activity;GO:0042742|defense response to bacterium;GO:0009535|chloroplast thylakoid membrane;GO:0016491|oxidoreductase activity | GhM_A05G2081.1,GhM_D05G2101.1,GhM_A11G2032.1,GhM_D11G2019.1,GhM_A12G0673.1,GhM_D12G0675.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G47270 | AtTLP6; AtTLP6 (TUBBY LIKE PROTEIN 6); phosphoric diester hydrolase/ transcription factor | GO:0008081|phosphoric diester hydrolase activity;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G2155.1,GhM_D05G2178.1,GhM_A06G0098.1,GhM_A05G2897.1,GhM_D05G2908.1,GhM_D06G0095.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G42620 | metalloendopeptidase/ zinc ion binding | GO:0012505|endomembrane system;GO:0007155|cell adhesion;GO:0006508|proteolysis;GO:0016020|membrane;GO:0008270|zinc ion binding | GhM_A05G2199.1,GhM_D05G2222.1,GhM_A05G2909.1,GhM_D05G2923.1,GhM_A06G0125.1,GhM_D06G0123.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G11800 | hydrolase/ protein serine/threonine phosphatase | GO:0008150|biological_process;GO:0004722|protein serine/threonine phosphatase activity;GO:0016787|hydrolase activity;GO:0005783|endoplasmic reticulum | GhM_A05G2250.1,GhM_D05G2269.1,GhM_A05G3816.1,GhM_A06G0168.1,GhM_D06G0173.1,GhM_A12G1914.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37260 | MYB73, ATMYB73; MYB73 (MYB DOMAIN PROTEIN 73); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0046686|response to cadmium ion;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | GhM_A05G2318.1,GhM_D05G2334.1,GhM_A06G0227.1,GhM_A05G2944.1,GhM_D05G2951.1,GhM_D06G0231.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G49650 | xylulose kinase, putative | GO:0005997|xylulose metabolic process;GO:0005829|cytosol;GO:0004856|xylulokinase activity | GhM_A05G2410.1,GhM_D05G2422.1,GhM_D06G1831.1,GhM_D13G0408.1,GhM_D08G1669.1,GhM_D11G2982.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12680 | PEPKR2; PEPKR2 (Phosphoenolpyruvate carboxylase-related kinase 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G2484.1,GhM_D05G2497.1,GhM_D06G0376.1,GhM_A05G2485.1,GhM_D05G2498.1,GhM_A06G0366.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G78240 | TSD2, QUA2; TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase | GO:0048364|root development;GO:0048367|shoot development;GO:0009735|response to cytokinin stimulus;GO:0008168|methyltransferase activity;GO:0005794|Golgi apparatus;GO:0010289|homogalacturonan biosynthetic process | GhM_A05G2533.1,GhM_D05G2541.1,GhM_A05G2997.1,GhM_D05G3000.1,GhM_A06G0400.1,GhM_D06G0404.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G36050 | unknown protein | GO:0005886|plasma membrane;GO:0006633|fatty acid biosynthetic process | GhM_A05G2558.1,GhM_D05G3012.1,GhM_A05G3008.1,GhM_D13G0593.1,GhM_A13G0793.1,GhM_D05G2570.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G78070 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G2560.1,GhM_D05G2572.1,GhM_A06G0426.1,GhM_D06G0451.1,GhM_D06G2177.1,GhM_D08G1409.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64610 | HAM1; HAM1 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 1); H3/H4 histone acetyltransferase/ histone acetyltransferase/ nucleic acid binding / zinc ion binding | GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0006333|chromatin assembly or disassembly;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0004402|histone acetyltransferase activity | GhM_A05G2593.1,GhM_D05G2607.1,GhM_A06G0478.1,GhM_D06G0495.1,GhM_D04G0057.1,GhM_D10G1689.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G77460 | binding | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A05G2650.1,GhM_D05G2661.1,GhM_A06G0532.1,GhM_D06G0544.1,GhM_A06G0533.1,GhM_A06G0534.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G35620 | ATPDIL5-2, ATPDI8, PDI8; ATPDIL5-2 (PDI-LIKE 5-2); protein disulfide isomerase | GO:0009505|plant-type cell wall;GO:0045454|cell redox homeostasis;GO:0005886|plasma membrane;GO:0003756|protein disulfide isomerase activity;GO:0005783|endoplasmic reticulum | GhM_A05G2810.1,GhM_D05G2821.1,GhM_A09G1489.1,GhM_A05G3091.1,GhM_D05G3090.1,GhM_D09G1395.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G40620 | bZIP transcription factor family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G3137.1,GhM_D05G3134.1,GhM_A10G2271.1,GhM_D10G2192.1,GhM_D06G2353.1,GhM_A06G2345.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G05240 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP030365 (InterPro:IPR016953); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40630.1); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G3139.1,GhM_D05G3140.1,GhM_A05G4753.1,GhM_D04G0160.1,GhM_D05G3139.1,GhM_D05G3138.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G09850 | transcription elongation factor-related | GO:0005515|protein binding;GO:0030528|transcription regulator activity;GO:0003677|DNA binding;GO:0006350|transcription;GO:0005829|cytosol | GhM_A05G3167.1,GhM_D05G3170.1,GhM_A05G4772.1,GhM_D04G0179.1,GhM_A06G2326.1,GhM_D06G2331.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13810 | glutaredoxin family protein | GO:0045454|cell redox homeostasis;GO:0015035|protein disulfide oxidoreductase activity;GO:0009055|electron carrier activity | GhM_A05G3173.1,GhM_D05G3177.1,GhM_A05G4773.1,GhM_D04G0180.1,GhM_A10G2325.1,GhM_D10G2247.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G61140 | FUS6, ATFUS6, CSN1, COP11, EMB78, ATSK31, SK31; FUS6 (FUSCA 6) | GO:0009640|photomorphogenesis;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0008180|signalosome;GO:0000338|protein deneddylation;GO:0010388|cullin deneddylation;GO:0009651|response to salt stress;GO:0006461|protein complex assembly;GO:0006972|hyperosmotic response;GO:0009646|response to absence of light | GhM_A05G3176.1,GhM_A06G2487.1,GhM_A11G0988.1,GhM_D11G1002.1,GhM_A12G1383.1,GhM_D12G1327.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G63090||AT1G12710 | AtPP2-A12; AtPP2-A12 (Phloem protein 2-A12); carbohydrate binding||AtPP2-A11; AtPP2-A11 (Phloem protein 2-A11); carbohydrate binding | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0030246|carbohydrate binding | GhM_A05G3189.1,GhM_D05G3189.1,GhM_A08G2339.1,GhM_D08G2286.1,GhM_A09G2341.1,GhM_D09G2241.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06100 | MYB33, ATMYB33; MYB33 (MYB DOMAIN PROTEIN 33); DNA binding / transcription factor | GO:0005634|nucleus;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0048235|pollen sperm cell differentiation;GO:0009740|gibberellic acid mediated signaling pathway;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A05G3228.1,GhM_D05G3216.1,GhM_A05G4721.1,GhM_D04G0220.1,GhM_A06G2285.1,GhM_D06G2280.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G04940 | SUVH1; SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | GO:0040029|regulation of gene expression, epigenetic;GO:0005634|nucleus;GO:0042054|histone methyltransferase activity | GhM_A05G3235.1,GhM_D05G3219.1,GhM_A05G4739.1,GhM_D04G0210.1,GhM_A13G0047.1,GhM_D13G0048.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G04430 | BTR1, BTR1L; BTR1L (BINDING TO TOMV RNA 1L (LONG FORM)); nucleic acid binding | GO:0003727|single-stranded RNA binding;GO:0046719|regulation of viral protein levels in host cell | GhM_A05G3310.1,GhM_D05G3292.1,GhM_A06G2236.1,GhM_D06G2217.1,GhM_A10G2547.1,GhM_D10G2461.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G23440 | nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor | GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0045087|innate immune response;GO:0005886|plasma membrane;GO:0007165|signal transduction;GO:0017111|nucleoside-triphosphatase activity | GhM_A05G3329.1,GhM_D05G3308.1,GhM_A05G4875.1,GhM_D04G0073.1,GhM_A10G2572.1,GhM_D10G2486.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G50490 | UBC20; UBC20 (ubiquitin-conjugating enzyme 20); ubiquitin-protein ligase | GO:0008283|cell proliferation;GO:0004842|ubiquitin-protein ligase activity | GhM_A05G3379.1,GhM_D05G3353.1,GhM_A05G4895.1,GhM_D04G0053.1,GhM_A07G1481.1,GhM_D07G1454.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G39805 | integral membrane Yip1 family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G3454.1,GhM_D05G3423.1,GhM_A05G4163.1,GhM_D04G0766.1,GhM_A10G2839.1,GhM_D10G2804.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G55740||AT2G39890 | PROT1, ATPROT1; PROT1 (PROLINE TRANSPORTER 1); L-proline transmembrane transporter/ amino acid transmembrane transporter||PROT2, ATPROT2; PROT2 (PROLINE TRANSPORTER 2); L-proline transmembrane transporter/ amino acid transmembrane transporter | GO:0015824|proline transport;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015193|L-proline transmembrane transporter activity;GO:0016020|membrane | GhM_A05G3483.1,GhM_D05G3433.1,GhM_A06G2161.1,GhM_D06G2140.1,GhM_A10G2884.1,GhM_D10G2863.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G40000 | HSPRO2, ATHSPRO2; HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) | GO:0006979|response to oxidative stress;GO:0003674|molecular_function;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009751|response to salicylic acid stimulus;GO:0005575|cellular_component | GhM_A05G3490.1,GhM_D05G3439.1,GhM_A10G2936.1,GhM_D10G2897.1,GhM_A13G0199.1,GhM_D13G0189.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G05710||AT2G29700 | pleckstrin homology (PH) domain-containing protein||ATPH1; ATPH1 (ARABIDOPSIS THALIANA PLECKSTRIN HOMOLOGUE 1); phosphoinositide binding | GO:0007165|signal transduction;GO:0035091|phosphoinositide binding;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G3495.1,GhM_D05G3441.1,GhM_A13G2887.1,GhM_A07G1246.1,GhM_D07G1228.1,GhM_D13G2788.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G69010 | BIM2; BIM2 (BES1-interacting Myc-like protein 2); DNA binding / transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0019305|dTDP-rhamnose biosynthetic process;GO:0003700|transcription factor activity | GhM_A05G3546.1,GhM_D05G3498.1,GhM_A13G1222.1,GhM_D13G0988.1,GhM_D12G1958.1,GhM_A12G2055.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G67970 | AT-HSFA8, HSFA8; AT-HSFA8; DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G3555.1,GhM_A12G2009.1,GhM_D12G1919.1,GhM_A13G0306.1,GhM_D13G0292.1,GhM_D05G3509.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G34300||AT4G21390||AT4G33430 | BAK1, RKS10, SERK3, ELG, ATSERK3, ATBAK1; BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase/ protein binding / protein heterodimerization/ protein serine/threonine kinase||B120; B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding||lectin protein kinase family protein | GO:0009742|brassinosteroid mediated signaling pathway;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0008219|cell death;GO:0005886|plasma membrane;GO:0004674|protein serine/threonine kinase activity;GO:0002229|defense response to oomycetes;GO:0005768|endosome;GO:0016301|kinase activity;GO:0050832|defense response to fungus;GO:0048544|recognition of pollen;GO:0004672|protein kinase activity;GO:0016049|cell growth;GO:0043234|protein complex;GO:0046982|protein heterodimerization activity;GO:0005515|protein binding;GO:0030246|carbohydrate binding;GO:0042742|defense response to bacterium;GO:0005524|ATP binding | GhM_A05G3560.1,GhM_D05G3514.1,GhM_D12G1914.1,GhM_A12G2004.1,GhM_A12G2005.1,GhM_D05G3515.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G50420 | SCL3, SCL-3; SCL3; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009739|response to gibberellin stimulus;GO:0045449|regulation of transcription | GhM_A05G3950.1,GhM_D04G0845.1,GhM_A13G0158.1,GhM_A09G1432.1,GhM_D09G1343.1,GhM_D13G0154.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G01980 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0005488|binding;GO:0008152|metabolic process;GO:0003824|catalytic activity | GhM_A05G4006.1,GhM_D04G0895.1,GhM_A07G2946.1,GhM_D07G2846.1,GhM_A09G0503.1,GhM_D09G0460.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G14120 | nodulin family protein | GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A05G4013.1,GhM_D04G0903.1,GhM_A07G2934.1,GhM_D07G2832.1,GhM_A09G0501.1,GhM_D09G0454.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G27090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4021.1,GhM_D04G0911.1,GhM_A07G2927.1,GhM_D07G2826.1,GhM_A11G0751.1,GhM_D11G0763.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G14250 | COP13, CSN3, FUS11; COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13); protein binding | GO:0005515|protein binding;GO:0000085|G2 phase of mitotic cell cycle;GO:0009640|photomorphogenesis;GO:0008180|signalosome;GO:0010388|cullin deneddylation | GhM_A05G4041.1,GhM_D04G0932.1,GhM_A09G0471.1,GhM_D09G0431.1,GhM_A10G2003.1,GhM_D10G0906.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40760 | G6PD6; G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6); glucose-6-phosphate dehydrogenase | GO:0004345|glucose-6-phosphate dehydrogenase activity;GO:0006006|glucose metabolic process;GO:0009051|pentose-phosphate shunt, oxidative branch;GO:0005829|cytosol | GhM_A05G4051.1,GhM_D04G0940.1,GhM_A07G2897.1,GhM_D07G2800.1,GhM_A09G0455.1,GhM_D09G0415.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G55060||AT2G39300 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A05G4077.1,GhM_D04G0967.1,GhM_A06G2214.1,GhM_D06G2182.1,GhM_A10G2639.1,GhM_D10G2553.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G30360||AT2G24610 | ATCNGC14, CNGC14; ATCNGC14; calmodulin binding / cyclic nucleotide binding / ion channel||ATCNGC17, CNGC17; ATCNGC17; calmodulin binding / cyclic nucleotide binding / ion channel | GO:0030551|cyclic nucleotide binding;GO:0006811|ion transport;GO:0005516|calmodulin binding;GO:0006813|potassium ion transport;GO:0016020|membrane;GO:0005216|ion channel activity | GhM_A05G4109.1,GhM_D04G1002.1,GhM_A06G1293.1,GhM_D06G1302.1,GhM_A13G2401.1,GhM_D13G2299.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G05960||AT3G53980 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0008289|lipid binding;GO:0006869|lipid transport | GhM_A05G4158.1,GhM_D04G0772.1,GhM_A09G1993.1,GhM_D09G1894.1,GhM_A11G4112.1,GhM_D11G4005.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G40190 | glycosyl transferase family 1 protein | GO:0005789|endoplasmic reticulum membrane;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0006496|protein amino acid terminal N-glycosylation;GO:0009832|plant-type cell wall biogenesis;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A05G4177.1,GhM_A13G2077.1,GhM_D05G2008.1,GhM_A06G1359.1,GhM_D06G0688.1,GhM_A13G0181.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G07980||AT5G07940||AT5G07970 | dentin sialophosphoprotein-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1); Has 1902 Blast hits to 1005 proteins in 152 species: Archae - 2; Bacteria - 147; Metazoa - 535; Fungi - 166; Plants - 86; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4181.1,GhM_D05G1178.1,GhM_A12G2319.1,GhM_D12G2211.1,GhM_D02G0966.1,GhM_D03G0259.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G27460||AT5G40550 | unknown protein | GO:0008150|biological_process;GO:0005634|nucleus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4252.1,GhM_D11G0779.1,GhM_A07G2875.1,GhM_D07G2781.1,GhM_A11G0766.1,GhM_D04G0685.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40390 | SIP1; SIP1 (seed imbibition 1-like); galactinol-sucrose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0009507|chloroplast;GO:0047274|galactinol-sucrose galactosyltransferase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0010325|raffinose family oligosaccharide biosynthetic process;GO:0009414|response to water deprivation;GO:0005986|sucrose biosynthetic process;GO:0019593|mannitol biosynthetic process | GhM_A05G4275.1,GhM_D04G0664.1,GhM_A09G0387.1,GhM_D09G0354.1,GhM_D07G0751.1,GhM_A07G0761.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G01540 | DRH1, ATDRH1; DRH1 (DEAD BOX RNA HELICASE 1); ATP-dependent RNA helicase/ ATPase | GO:0004004|ATP-dependent RNA helicase activity;GO:0016887|ATPase activity | GhM_A05G4280.1,GhM_D04G0657.1,GhM_A07G2845.1,GhM_D07G2750.1,GhM_A09G0365.1,GhM_D09G0336.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G01500 | CA1; CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding | GO:0042742|defense response to bacterium;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0004089|carbonate dehydratase activity;GO:0015976|carbon utilization;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0010319|stromule;GO:0009817|defense response to fungus, incompatible interaction;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane;GO:0009409|response to cold | GhM_A05G4291.1,GhM_D09G0326.1,GhM_A09G0348.1,GhM_D07G2741.1,GhM_A07G2835.1,GhM_D04G0645.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40190 | calmodulin-binding protein | GO:0016070|RNA metabolic process;GO:0005622|intracellular;GO:0005516|calmodulin binding | GhM_A05G4315.1,GhM_D04G0621.1,GhM_A09G0331.1,GhM_D09G0305.1,GhM_A10G1154.1,GhM_D10G0945.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G15070||AT3G01310 | acid phosphatase/ oxidoreductase/ transition metal ion binding | GO:0008150|biological_process;GO:0003993|acid phosphatase activity;GO:0005886|plasma membrane;GO:0046914|transition metal ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A05G4353.1,GhM_D04G0583.1,GhM_A09G0273.1,GhM_A05G4354.1,GhM_D04G0582.1,GhM_D09G0252.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G26690||AT1G14010 | emp24/gp25L/p24 family protein | GO:0012505|endomembrane system;GO:0008320|protein transmembrane transporter activity;GO:0006810|transport;GO:0006886|intracellular protein transport;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A05G4402.1,GhM_D13G2235.1,GhM_A13G2345.1,GhM_D04G0541.1,GhM_D09G0156.1,GhM_A09G0157.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G29270 | ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity | GhM_A05G4417.1,GhM_D04G0526.1,GhM_A09G0133.1,GhM_D09G0133.1,GhM_A11G0831.1,GhM_D11G0849.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G01050 | MUB1; MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR) | GO:0006464|protein modification process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4421.1,GhM_D04G0522.1,GhM_A09G0126.1,GhM_D09G0125.1,GhM_A11G0833.1,GhM_D11G0851.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G02090 | MPPBETA; mitochondrial processing peptidase beta subunit, putative | GO:0005759|mitochondrial matrix;GO:0009507|chloroplast;GO:0005758|mitochondrial intermembrane space;GO:0005750|mitochondrial respiratory chain complex III;GO:0005739|mitochondrion;GO:0005730|nucleolus;GO:0005741|mitochondrial outer membrane;GO:0005618|cell wall;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0005743|mitochondrial inner membrane | GhM_A05G4427.1,GhM_D04G0517.1,GhM_A09G0121.1,GhM_D09G0120.1,GhM_A11G0838.1,GhM_D11G0855.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G52390||AT2G42830 | SHP2, AGL5; SHP2 (SHATTERPROOF 2); protein binding / transcription factor||tatD-related deoxyribonuclease family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0016888|endodeoxyribonuclease activity, producing 5'-phosphomonoesters;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0048440|carpel development;GO:0005575|cellular_component;GO:0004536|deoxyribonuclease activity;GO:0048481|ovule development | GhM_A05G4438.1,GhM_A13G0617.1,GhM_A09G0146.1,GhM_A09G1682.1,GhM_D09G1584.1,GhM_A10G1969.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G58760||AT4G18950 | ankyrin protein kinase, putative | GO:0009966|regulation of signal transduction;GO:0005634|nucleus;GO:0006468|protein amino acid phosphorylation;GO:0005737|cytoplasm;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity | GhM_A05G4505.1,GhM_D04G0445.1,GhM_A06G1610.1,GhM_D06G1761.1,GhM_A10G0353.1,GhM_D10G0341.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64440 | AtFAAH; AtFAAH (Arabidopsis thaliana fatty acid amide hydrolase); N-(long-chain-acyl)ethanolamine deacylase/ amidase | GO:0047412|N-(long-chain-acyl)ethanolamine deacylase activity;GO:0004040|amidase activity;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0042742|defense response to bacterium;GO:0005773|vacuole | GhM_A05G4559.1,GhM_D04G0391.1,GhM_A10G0756.1,GhM_D10G1168.1,GhM_A11G0690.1,GhM_D11G0698.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64667||AT3G18715 | IDL2; IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2)||IDL4; IDL4 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 4) | GO:0010227|floral organ abscission | GhM_A05G4605.1,GhM_D04G0346.1,GhM_A11G0666.1,GhM_A10G0946.1,GhM_D10G1147.1,GhM_D11G0675.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G02830 | ZFN1; ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0004518|nuclease activity;GO:0003676|nucleic acid binding | GhM_A05G4659.1,GhM_D04G0288.1,GhM_A08G2910.1,GhM_D08G2851.1,GhM_A13G2072.1,GhM_D13G1964.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G02790 | zinc finger (C2H2 type) family protein | GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0045449|regulation of transcription | GhM_A05G4663.1,GhM_D04G0285.1,GhM_A08G2914.1,GhM_D08G2853.1,GhM_A13G2070.1,GhM_D13G1961.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G16450||AT5G56260 | dimethylmenaquinone methyltransferase family protein | GO:0008428|ribonuclease inhibitor activity;GO:0051252|regulation of RNA metabolic process;GO:0005575|cellular_component | GhM_A05G4676.1,GhM_D04G0269.1,GhM_A08G0350.1,GhM_D08G0333.1,GhM_A09G0877.1,GhM_D09G0814.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G02750 | protein phosphatase 2C family protein / PP2C family protein | GO:0004722|protein serine/threonine phosphatase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0006499|N-terminal protein myristoylation | GhM_A05G4679.1,GhM_D04G0266.1,GhM_A08G2929.1,GhM_D08G2867.1,GhM_D13G1061.1,GhM_A13G1189.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07950 | rhomboid protein-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G4894.1,GhM_D04G0054.1,GhM_A10G2618.1,GhM_D10G2533.1,GhM_A13G0273.1,GhM_D13G0258.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G53170 | FTSH11; FTSH11 (FtsH protease 11); ATP-dependent peptidase/ ATPase/ metallopeptidase | GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0010304|PSII associated light-harvesting complex II catabolic process;GO:0009408|response to heat;GO:0016887|ATPase activity | GhM_A05G4900.1,GhM_D09G2140.1,GhM_A09G2233.1,GhM_D04G0047.1,GhM_A12G2062.1,GhM_D04G0046.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G49220||AT5G53370 | pectinesterase family protein||ATPMEPCRF, PMEPCRF; PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase | GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A05G4918.1,GhM_D04G0029.1,GhM_A11G0165.1,GhM_D11G0163.1,GhM_A12G3073.1,GhM_D12G2956.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G65380 | ripening-responsive protein, putative | GO:0015297|antiporter activity;GO:0009835|ripening;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A06G0370.1,GhM_D06G0380.1,GhM_A11G2420.1,GhM_A10G0991.1,GhM_D10G1091.1,GhM_D11G2466.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G35430 | binding | GO:0005488|binding | GhM_A06G0632.1,GhM_D06G0624.1,GhM_A08G1139.1,GhM_D08G1110.1,GhM_A13G2631.1,GhM_D13G2534.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G26830 | emb1187; emb1187 (embryo defective 1187); kinase/ phosphotransferase, alcohol group as acceptor | GO:0009793|embryonic development ending in seed dormancy;GO:0016301|kinase activity;GO:0016773|phosphotransferase activity, alcohol group as acceptor;GO:0005575|cellular_component | GhM_A06G0672.1,GhM_D06G0675.1,GhM_A07G0445.1,GhM_D07G0442.1,GhM_A08G3074.1,GhM_D08G3006.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G55270 | kelch repeat-containing F-box family protein | GO:0003674|molecular_function | GhM_A06G0673.1,GhM_D06G0676.1,GhM_A07G0444.1,GhM_D07G0441.1,GhM_A13G2761.1,GhM_D13G2653.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G24620||AT4G13240 | ATROPGEF9, ROPGEF9; ROPGEF9; Rho guanyl-nucleotide exchange factor||ATROPGEF8, ROPGEF8; ROPGEF8; Rho guanyl-nucleotide exchange factor | GO:0005089|Rho guanyl-nucleotide exchange factor activity;GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A06G0758.1,GhM_D06G0758.1,GhM_A07G0070.1,GhM_D07G0074.1,GhM_A08G3104.1,GhM_D08G3034.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A06G0806.1,GhM_D06G0810.1,GhM_A07G0109.1,GhM_D07G0110.1,GhM_A08G3126.1,GhM_D08G3052.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G56970 | CKX3, ATCKX3; CKX3 (CYTOKININ OXIDASE 3); amine oxidase/ cytokinin dehydrogenase | GO:0009823|cytokinin catabolic process;GO:0019139|cytokinin dehydrogenase activity;GO:0008131|amine oxidase activity;GO:0005773|vacuole | GhM_A06G0865.1,GhM_D06G0869.1,GhM_A07G0142.1,GhM_D07G0142.1,GhM_A13G2549.1,GhM_D13G2462.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G25390||AT5G11190 | SHN2; SHN2 (shine2); DNA binding / transcription factor||SHN3; SHN3 (shine3); DNA binding / transcription factor | GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A06G1196.1,GhM_D06G1225.1,GhM_A08G3220.1,GhM_A07G0362.1,GhM_D07G0361.1,GhM_D08G3154.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G25300||AT4G32120 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||galactosyltransferase family protein | GO:0008378|galactosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0006486|protein amino acid glycosylation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_A06G1217.1,GhM_D06G1243.1,GhM_A08G3225.1,GhM_D08G3156.1,GhM_D06G1393.1,GhM_D03G0680.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G30620 | HSR8, MUR4, UXE1; MUR4 (MURUS 4); UDP-arabinose 4-epimerase/ catalytic | GO:0003824|catalytic activity;GO:0019567|arabinose biosynthetic process;GO:0005794|Golgi apparatus;GO:0050373|UDP-arabinose 4-epimerase activity;GO:0009832|plant-type cell wall biogenesis;GO:0009225|nucleotide-sugar metabolic process | GhM_A06G1316.1,GhM_D06G1516.1,GhM_A06G2365.1,GhM_D06G2375.1,GhM_A10G0075.1,GhM_D10G0057.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G18910 | NIP1;2, NLM2; NIP1;2 (NOD26-LIKE INTRINSIC PROTEIN 1;2); arsenite transmembrane transporter/ water channel | GO:0015105|arsenite transmembrane transporter activity;GO:0015250|water channel activity;GO:0046685|response to arsenic;GO:0015700|arsenite transport;GO:0006810|transport;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A06G1600.1,GhM_D06G1752.1,GhM_A06G2544.1,GhM_D06G2537.1,GhM_A10G0355.1,GhM_D10G0343.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29340 | PUB17, ATPUB17; PUB17 (PLANT U-BOX 17); ubiquitin-protein ligase | GO:0009814|defense response, incompatible interaction;GO:0000151|ubiquitin ligase complex;GO:0006915|apoptosis;GO:0009817|defense response to fungus, incompatible interaction;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination | GhM_A06G1737.1,GhM_D06G1746.1,GhM_A09G1025.1,GhM_D09G0961.1,GhM_A10G0362.1,GhM_D10G0350.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G18570 | proline-rich family protein | - | GhM_A06G1742.1,GhM_D06G1707.1,GhM_A09G1015.1,GhM_D09G0949.1,GhM_A10G0336.1,GhM_D10G0324.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G46210 | CUL4, ATCUL4; CUL4 (CULLIN4); protein binding / ubiquitin-protein ligase | GO:0005515|protein binding;GO:0048367|shoot development;GO:0009640|photomorphogenesis;GO:0048575|short-day photoperiodism, flowering;GO:0005634|nucleus;GO:0048825|cotyledon development;GO:0000151|ubiquitin ligase complex;GO:0006281|DNA repair;GO:0009908|flower development;GO:0010154|fruit development;GO:0010182|sugar mediated signaling pathway;GO:0048366|leaf development;GO:0010100|negative regulation of photomorphogenesis;GO:0007049|cell cycle;GO:0000209|protein polyubiquitination;GO:0004842|ubiquitin-protein ligase activity;GO:0009755|hormone-mediated signaling pathway | GhM_A06G1811.1,GhM_D06G1797.1,GhM_A06G2521.1,GhM_D06G2515.1,GhM_A10G0458.1,GhM_D10G0439.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G11600 | CYP77B1; CYP77B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A06G1949.1,GhM_D06G1929.1,GhM_A10G0163.1,GhM_D10G0150.1,GhM_D06G2606.1,GhM_A06G2615.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G11915 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A06G1988.1,GhM_D06G1968.1,GhM_A06G2631.1,GhM_D06G2619.1,GhM_A10G0130.1,GhM_D10G0117.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12000 | pyrophosphate--fructose-6-phosphate 1-phosphotransferase beta subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putative | GO:0046686|response to cadmium ion;GO:0047334|diphosphate-fructose-6-phosphate 1-phosphotransferase activity;GO:0010318|pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex;GO:0005618|cell wall;GO:0016020|membrane;GO:0006096|glycolysis;GO:0015979|photosynthesis | GhM_A06G2004.1,GhM_D06G1987.1,GhM_A10G0120.1,GhM_D10G0105.1,GhM_A11G1801.1,GhM_D11G1788.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G40140 | CZF1, ZFAR1, SZF2, ATSZF2; CZF1; transcription factor | GO:0045449|regulation of transcription;GO:0010200|response to chitin;GO:0003700|transcription factor activity;GO:0050832|defense response to fungus;GO:0005575|cellular_component;GO:0009409|response to cold | GhM_A06G2136.1,GhM_D06G2115.1,GhM_A10G2979.1,GhM_D10G2928.1,GhM_A13G0185.1,GhM_D13G0174.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G13500 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A06G2319.1,GhM_D06G2324.1,GhM_A09G1416.1,GhM_D09G1328.1,GhM_A10G2350.1,GhM_D10G2270.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G56370 | leucine-rich repeat transmembrane protein kinase, putative | GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A06G2342.1,GhM_D06G2350.1,GhM_A10G2276.1,GhM_A10G1882.1,GhM_D10G1260.1,GhM_D10G2199.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G18820 | ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding | GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0006260|DNA replication;GO:0003677|DNA binding;GO:0005886|plasma membrane;GO:0003887|DNA-directed DNA polymerase activity;GO:0005524|ATP binding | GhM_A06G2548.1,GhM_D06G2541.1,GhM_A10G0363.1,GhM_A09G1024.1,GhM_D09G0960.1,GhM_D10G0351.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G29050 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_A06G2561.1,GhM_D06G2554.1,GhM_A09G1016.1,GhM_D09G0950.1,GhM_A10G0337.1,GhM_D10G0325.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G21560||AT4G05000 | VPS28-1; VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1); transporter||VPS28-2; VPS28-2; transporter | GO:0000813|ESCRT I complex;GO:0005215|transporter activity;GO:0006810|transport | GhM_A06G2598.1,GhM_D06G2589.1,GhM_A09G0981.1,GhM_D09G0917.1,GhM_A10G0222.1,GhM_D10G0207.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G32650 | ATKC1, KAT3; ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1); cyclic nucleotide binding / inward rectifier potassium channel | GO:0030551|cyclic nucleotide binding;GO:0009624|response to nematode;GO:0005242|inward rectifier potassium channel activity;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | GhM_A07G0319.1,GhM_D07G0318.1,GhM_A13G2463.1,GhM_D13G2357.1,GhM_A13G2464.1,GhM_A13G2465.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G25420||AT5G51810 | GA5, GA20OX1, AT2301, ATGA20OX1; GA20OX1; gibberellin 20-oxidase||GA20OX2, AT2353, ATGA20OX2; GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase | GO:0009826|unidimensional cell growth;GO:0009686|gibberellin biosynthetic process;GO:0009739|response to gibberellin stimulus;GO:0048575|short-day photoperiodism, flowering;GO:0009639|response to red or far red light;GO:0009908|flower development;GO:0005737|cytoplasm;GO:0009740|gibberellic acid mediated signaling pathway;GO:0045544|gibberellin 20-oxidase activity | GhM_A07G0506.1,GhM_D07G0498.1,GhM_A09G0505.1,GhM_D09G0572.1,GhM_A09G2182.1,GhM_D09G2096.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G51170||AT1G69770 | unknown protein||CMT3; CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase | GO:0008150|biological_process;GO:0010069|zygote asymmetric cytokinesis in the embryo sac;GO:0045814|negative regulation of gene expression, epigenetic;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0006342|chromatin silencing;GO:0006306|DNA methylation;GO:0003886|DNA (cytosine-5-)-methyltransferase activity;GO:0000785|chromatin;GO:0005575|cellular_component;GO:0010425|DNA methylation on cytosine within a CNG sequence | GhM_A07G0556.1,GhM_D02G1600.1,GhM_A13G0361.1,GhM_D07G0546.1,GhM_A13G0363.1,GhM_D02G1704.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G51070 | ERD1, CLPD; ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | GO:0005515|protein binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0009570|chloroplast stroma;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A07G0567.1,GhM_D07G0556.1,GhM_A09G3018.1,GhM_D13G0008.1,GhM_A09G3019.1,GhM_D09G2879.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G48530 | KING1; KING1 (SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1) | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0003674|molecular_function | GhM_A07G0630.1,GhM_D07G0624.1,GhM_A11G0454.1,GhM_D11G0435.1,GhM_A12G2400.1,GhM_D12G2294.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G48440||AT5G63260 | zinc finger (CCCH-type) family protein | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A07G0658.1,GhM_D07G0651.1,GhM_A11G0443.1,GhM_D11G0424.1,GhM_A12G2384.1,GhM_D12G2279.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G48630 | RACK1B_AT; RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding | GO:0022626|cytosolic ribosome | GhM_A07G0748.1,GhM_D07G0738.1,GhM_A09G2146.1,GhM_D09G2059.1,GhM_A12G3282.1,GhM_D12G3169.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G47620 | AtTCP14; AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0045449|regulation of transcription;GO:0010029|regulation of seed germination;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A07G0775.1,GhM_D07G0766.1,GhM_A11G0395.1,GhM_D11G0376.1,GhM_A12G2248.1,GhM_D12G2149.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G26420 | ATRZ-1A; ATRZ-1A; RNA binding / nucleotide binding | GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0009631|cold acclimation;GO:0005575|cellular_component;GO:0009409|response to cold | GhM_A07G0795.1,GhM_D07G0792.1,GhM_A12G2261.1,GhM_D12G2160.1,GhM_A13G1210.1,GhM_D13G1069.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G02290||AT5G38895 | zinc finger (C3HC4-type RING finger) family protein | GO:0010200|response to chitin;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0006499|N-terminal protein myristoylation | GhM_A07G0955.1,GhM_D07G0952.1,GhM_A07G2103.1,GhM_D07G2079.1,GhM_A07G2294.1,GhM_D07G2227.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G30890||AT4G18260 | membrane protein, putative||cytochrome B561-related | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A07G0982.1,GhM_D07G0970.1,GhM_D11G1820.1,GhM_A07G2337.1,GhM_D07G2273.1,GhM_D11G1830.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G32970 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G1010.1,GhM_D07G1002.1,GhM_A11G1797.1,GhM_D11G1784.1,GhM_D07G2068.1,GhM_A07G2091.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G32950 | COP1, ATCOP1, DET340, FUS1, EMB168; COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1); protein binding / ubiquitin-protein ligase | GO:0000152|nuclear ubiquitin ligase complex;GO:0005515|protein binding;GO:0009640|photomorphogenesis;GO:0009647|skotomorphogenesis;GO:0005634|nucleus;GO:0006281|DNA repair;GO:0009641|shade avoidance;GO:0010119|regulation of stomatal movement;GO:0004842|ubiquitin-protein ligase activity;GO:0010224|response to UV-B;GO:0046283|anthocyanin metabolic process;GO:0048573|photoperiodism, flowering;GO:0009963|positive regulation of flavonoid biosynthetic process | GhM_A07G1031.1,GhM_D07G1023.1,GhM_A11G1792.1,GhM_D11G1778.1,GhM_D10G0102.1,GhM_A10G0117.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07890 | RabGAP/TBC domain-containing protein | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity | GhM_A07G1043.1,GhM_D07G1032.1,GhM_A07G2203.1,GhM_D07G2047.1,GhM_A07G2437.1,GhM_D07G2344.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G04780 | FLA7; FLA7 (FASCICLIN-LIKE ARABINOOGALACTAN 7) | GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0046658|anchored to plasma membrane | GhM_A07G1048.1,GhM_A07G2439.1,GhM_A07G2127.1,GhM_D07G2046.1,GhM_A08G0645.1,GhM_D08G0614.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sterile alpha motif SAM (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif homology 2 (InterPro:IPR011510); Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 6; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G1061.1,GhM_D07G1044.1,GhM_A07G2187.1,GhM_D07G2009.1,GhM_A11G1760.1,GhM_D11G1744.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07510 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G1090.1,GhM_D07G1072.1,GhM_A07G2021.1,GhM_D07G1969.1,GhM_A11G1690.1,GhM_D11G1678.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G22850 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A07G1278.1,GhM_D07G1256.1,GhM_A09G1167.1,GhM_D09G1098.1,GhM_A13G2875.1,GhM_D13G2775.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G44260||AT5G22250 | CCR4-NOT transcription complex protein, putative | GO:0004540|ribonuclease activity;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0003676|nucleic acid binding;GO:0009607|response to biotic stimulus;GO:0009451|RNA modification | GhM_A07G1345.1,GhM_D07G1324.1,GhM_A08G0124.1,GhM_D08G0113.1,GhM_A09G1286.1,GhM_D09G1220.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G12330 | LRP1; LRP1 (LATERAL ROOT PRIMORDIUM 1); protein homodimerization | GO:0048364|root development;GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0042803|protein homodimerization activity | GhM_A07G1451.1,GhM_D07G1427.1,GhM_A08G0160.1,GhM_D08G0149.1,GhM_A09G1412.1,GhM_D09G1324.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G47500 | ATP binding / microtubule motor | GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0005524|ATP binding;GO:0003777|microtubule motor activity | GhM_A07G1536.1,GhM_D07G1503.1,GhM_A08G1613.1,GhM_D08G1564.1,GhM_A08G1614.1,GhM_D08G1565.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G02090 | unknown protein | GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0003674|molecular_function | GhM_A07G1560.1,GhM_D07G1526.1,GhM_D08G1579.1,GhM_A08G1625.1,GhM_D12G1587.1,GhM_A12G1641.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G62420 | ATBZIP53; ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53); DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor | GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0046982|protein heterodimerization activity | GhM_A07G1565.1,GhM_D07G1531.1,GhM_D11G1287.1,GhM_A08G0515.1,GhM_D08G0493.1,GhM_A11G1289.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G02400 | ATGA2OX4, ATGA2OX6, DTA1, GA2OX6; GA2OX6 (GIBBERELLIN 2-OXIDASE 6); gibberellin 2-beta-dioxygenase | GO:0045487|gibberellin catabolic process;GO:0045543|gibberellin 2-beta-dioxygenase activity;GO:0009639|response to red or far red light | GhM_A07G1577.1,GhM_D07G1545.1,GhM_D12G1551.1,GhM_A08G0505.1,GhM_D08G0486.1,GhM_A12G1604.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G62260 | protein phosphatase 2C, putative / PP2C, putative | GO:0006470|protein amino acid dephosphorylation;GO:0004722|protein serine/threonine phosphatase activity;GO:0008287|protein serine/threonine phosphatase complex;GO:0003824|catalytic activity | GhM_A07G1583.1,GhM_D07G1552.1,GhM_A08G0500.1,GhM_D08G0480.1,GhM_A12G1592.1,GhM_D12G1540.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G01630 | ATEXPA17, ATEXP17, ATHEXP ALPHA 1.13; ATEXPA17 (ARABIDOPSIS THALIANA EXPANSIN A17) | GO:0012505|endomembrane system;GO:0009826|unidimensional cell growth;GO:0009828|plant-type cell wall loosening;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0005576|extracellular region | GhM_A07G1614.1,GhM_A11G1241.1,GhM_A08G1667.1,GhM_D08G1622.1,GhM_D07G1577.1,GhM_D11G1246.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G01575 | serine protease inhibitor, Kazal-type family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004867|serine-type endopeptidase inhibitor activity | GhM_A07G1620.1,GhM_D07G1585.1,GhM_A11G1200.1,GhM_D11G1206.1,GhM_A12G1544.1,GhM_D12G1494.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46770 | NST1, EMB2301, ANAC043; EMB2301 (EMBRYO DEFECTIVE 2301); transcription activator/ transcription factor | GO:0009834|secondary cell wall biogenesis;GO:0009901|anther dehiscence;GO:0016563|transcription activator activity;GO:0007275|multicellular organismal development;GO:0009793|embryonic development ending in seed dormancy;GO:0003700|transcription factor activity;GO:0009809|lignin biosynthetic process;GO:0010047|fruit dehiscence;GO:0005575|cellular_component | GhM_A07G1634.1,GhM_D07G1601.1,GhM_A11G1172.1,GhM_D11G1184.1,GhM_A12G1527.1,GhM_D12G1467.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46700||AT5G24430 | ATCRK3, CRK3; calcium-dependent protein kinase, putative / CDPK, putative||calcium-dependent protein kinase, putative / CDPK, putative | GO:0004723|calcium-dependent protein serine/threonine phosphatase activity;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0006499|N-terminal protein myristoylation;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A07G1647.1,GhM_D07G1613.1,GhM_A08G1340.1,GhM_D08G1320.1,GhM_A11G1164.1,GhM_D11G1174.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46500 | phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein | GO:0006464|protein modification process | GhM_A07G1674.1,GhM_D07G1641.1,GhM_A11G1125.1,GhM_D11G1135.1,GhM_A12G1486.1,GhM_D12G1423.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G01150 | unknown protein | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009579|thylakoid;GO:0010287|plastoglobule;GO:0009535|chloroplast thylakoid membrane | GhM_A07G1707.1,GhM_D08G1680.1,GhM_A08G1723.1,GhM_A11G1087.1,GhM_D11G1100.1,GhM_D07G1677.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G01490 | heavy-metal-associated domain-containing protein | GO:0046872|metal ion binding;GO:0005575|cellular_component;GO:0030001|metal ion transport | GhM_A07G1713.1,GhM_D07G1680.1,GhM_A08G1800.1,GhM_D08G1753.1,GhM_A12G1423.1,GhM_D12G1353.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46160 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A07G1715.1,GhM_D07G1682.1,GhM_A08G1739.1,GhM_D08G1695.1,GhM_A11G1077.1,GhM_D11G1090.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G00730 | ANL2, AHDP; ANL2 (ANTHOCYANINLESS 2); transcription factor/ transcription regulator | GO:0005634|nucleus | GhM_A07G1763.1,GhM_D07G1728.1,GhM_A11G0990.1,GhM_D11G1004.1,GhM_A12G1384.1,GhM_D12G1328.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G01910 | anion-transporting ATPase, putative | GO:0012505|endomembrane system | GhM_A07G1779.1,GhM_D07G1740.1,GhM_A08G1753.1,GhM_D08G1706.1,GhM_A12G1371.1,GhM_D12G1313.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G61130 | GAUT1, LGT1; GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | GO:0016051|carbohydrate biosynthetic process;GO:0005794|Golgi apparatus;GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0010289|homogalacturonan biosynthetic process | GhM_A07G1780.1,GhM_D07G1741.1,GhM_A08G1745.1,GhM_D08G1703.1,GhM_A11G0960.1,GhM_D11G0975.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60800 | zinc finger (DHHC type) family protein | GO:0008150|biological_process;GO:0008270|zinc ion binding | GhM_A07G1796.1,GhM_D07G1758.1,GhM_A11G0932.1,GhM_D11G0947.1,GhM_A12G1353.1,GhM_D12G1292.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60670 | zinc-binding protein, putative | GO:0008150|biological_process;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A07G1810.1,GhM_D07G1767.1,GhM_A08G1837.1,GhM_D08G1787.1,GhM_A11G0918.1,GhM_D11G0934.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60520||AT1G02070 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A07G1820.1,GhM_D07G1778.1,GhM_A08G1853.1,GhM_D08G1804.1,GhM_D12G1216.1,GhM_A12G1283.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G03950||AT5G44560 | VPS2.3; VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)||VPS2.2; VPS2.2 | GO:0016192|vesicle-mediated transport;GO:0000815|ESCRT III complex | GhM_A07G1852.1,GhM_D07G1813.1,GhM_A07G2752.1,GhM_D07G2652.1,GhM_A10G0064.1,GhM_D10G0051.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G43970 | TOM22-V, TOM9-2, ATTOM22-V; TOM22-V (TRANSLOCASE OF OUTER MEMBRANE 22-V); P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0005742|mitochondrial outer membrane translocase complex;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0005886|plasma membrane;GO:0006626|protein targeting to mitochondrion | GhM_A07G1874.1,GhM_D07G1831.1,GhM_A07G2634.1,GhM_D07G2533.1,GhM_A08G2484.1,GhM_D08G2431.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G28640 | IAA11; IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009733|response to auxin stimulus;GO:0010583|response to cyclopentenone | GhM_A07G1882.1,GhM_D07G1836.1,GhM_D11G1566.1,GhM_A08G2485.1,GhM_D08G2432.1,GhM_A11G1572.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G33150 | PKT3, PED1, KAT2; PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase | GO:0006635|fatty acid beta-oxidation;GO:0009695|jasmonic acid biosynthetic process;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0009611|response to wounding;GO:0005739|mitochondrion;GO:0019395|fatty acid oxidation;GO:0005730|nucleolus;GO:0010111|glyoxysome organization;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0003988|acetyl-CoA C-acyltransferase activity | GhM_A07G1929.1,GhM_D11G1589.1,GhM_A10G1480.1,GhM_D10G1639.1,GhM_A11G1594.1,GhM_D07G1883.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48850||AT1G04770 | male sterility MS5 family protein||ATSDI1; ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1); binding | GO:0008150|biological_process;GO:0005488|binding;GO:0010438|cellular response to sulfur starvation;GO:0006792|regulation of sulfur utilization;GO:0005575|cellular_component | GhM_A07G1932.1,GhM_D07G1886.1,GhM_A10G1488.1,GhM_D10G1626.1,GhM_A11G1601.1,GhM_D11G1594.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48720 | XRI, XRI1; XRI1 (X-RAY INDUCED TRANSCRIPT 1) | GO:0007140|male meiosis;GO:0007143|female meiosis;GO:0010165|response to X-ray;GO:0009555|pollen development;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0006281|DNA repair | GhM_A07G1953.1,GhM_D07G1906.1,GhM_A07G2587.1,GhM_D07G2490.1,GhM_A08G2533.1,GhM_D08G2467.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48655 | zinc finger (C3HC4-type RING finger) family protein | GO:0010200|response to chitin | GhM_A07G1957.1,GhM_D07G1910.1,GhM_A11G1642.1,GhM_D11G1629.1,GhM_D07G2473.1,GhM_A07G2573.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07360 | PUB9, ATPUB9; PUB9 (PLANT U-BOX 9); ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0005634|nucleus | GhM_A07G1991.1,GhM_D07G1938.1,GhM_A07G2554.1,GhM_D07G2456.1,GhM_A11G1662.1,GhM_D11G1649.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12970 | unknown protein | GO:0012505|endomembrane system;GO:0010374|stomatal complex development;GO:0010375|stomatal complex patterning;GO:0003674|molecular_function;GO:0007267|cell-cell signaling | GhM_A07G2000.1,GhM_D07G1945.1,GhM_A07G2544.1,GhM_D07G2447.1,GhM_A11G1673.1,GhM_D11G1662.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48500 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G2003.1,GhM_D07G1948.1,GhM_A07G2542.1,GhM_D07G2445.1,GhM_A11G1678.1,GhM_D11G1667.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G07565 | DNA binding | GO:0003677|DNA binding;GO:0009507|chloroplast | GhM_A07G2041.1,GhM_D07G1982.1,GhM_A08G0631.1,GhM_D08G0597.1,GhM_D11G1694.1,GhM_A11G1708.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12770 | heat shock protein binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005829|cytosol;GO:0031072|heat shock protein binding | GhM_A07G2043.1,GhM_D07G1984.1,GhM_A07G2519.1,GhM_D07G2421.1,GhM_A11G1712.1,GhM_D11G1698.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48300 | ADG1, APS1; ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase | GO:0009570|chloroplast stroma;GO:0009507|chloroplast;GO:0048046|apoplast | GhM_A07G2046.1,GhM_D07G1987.1,GhM_A07G2509.1,GhM_D07G2406.1,GhM_A11G1724.1,GhM_D11G1712.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G04220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G2056.1,GhM_D07G1994.1,GhM_A07G2501.1,GhM_D07G2401.1,GhM_A08G0633.1,GhM_D08G0599.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G07590 | WD-40 repeat protein family | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A07G2150.1,GhM_A09G1078.1,GhM_A12G2495.1,GhM_D12G2379.1,GhM_D04G0443.1,GhM_D09G0427.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G38710 | proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative | GO:0006562|proline catabolic process;GO:0006537|glutamate biosynthetic process;GO:0004657|proline dehydrogenase activity | GhM_A07G2260.1,GhM_D07G2189.1,GhM_A08G0450.1,GhM_D08G0436.1,GhM_A11G1955.1,GhM_D11G1942.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G30390 | amino acid transporter family protein | GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A07G2278.1,GhM_D07G2215.1,GhM_A11G1874.1,GhM_D11G1864.1,GhM_A12G0638.1,GhM_D12G0639.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G03475 | LIN2, HEMF1, ATCPO-I; LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase | GO:0009507|chloroplast;GO:0009536|plastid;GO:0033014|tetrapyrrole biosynthetic process;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0004109|coproporphyrinogen oxidase activity | GhM_A07G2373.1,GhM_D08G0623.1,GhM_A08G0653.1,GhM_D11G1803.1,GhM_A11G1815.1,GhM_D07G2295.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G48800 | phototropic-responsive NPH3 family protein | GO:0009416|response to light stimulus;GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0004871|signal transducer activity | GhM_A07G2596.1,GhM_D07G2499.1,GhM_A08G2522.1,GhM_D08G2459.1,GhM_A11G1624.1,GhM_D11G1606.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G28917||AT1G74660 | MIF1; MIF1 (MINI ZINC FINGER 1); DNA binding / transcription factor||MIF2; MIF2 (MINI ZINC FINGER 2); DNA binding | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0009640|photomorphogenesis;GO:0009739|response to gibberellin stimulus;GO:0009735|response to cytokinin stimulus;GO:0007275|multicellular organismal development;GO:0009737|response to abscisic acid stimulus;GO:0009733|response to auxin stimulus;GO:0009741|response to brassinosteroid stimulus;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A07G2651.1,GhM_D07G2549.1,GhM_A09G0198.1,GhM_D09G0190.1,GhM_A11G0399.1,GhM_D11G0382.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G29180||AT2G02380 | unknown protein||ATGSTZ2; ATGSTZ2; catalytic/ glutathione transferase | GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0006499|N-terminal protein myristoylation;GO:0005737|cytoplasm;GO:0005886|plasma membrane | GhM_A07G2666.1,GhM_D07G2567.1,GhM_A11G0820.1,GhM_D11G0839.1,GhM_D13G1699.1,GhM_D10G1603.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G08660||AT1G34320||AT2G36310 | unknown protein||URH1; URH1 (URIDINE-RIBOHYDROLASE 1); adenosine nucleosidase/ hydrolase/ inosine nucleosidase/ uridine nucleosidase | GO:0006218|uridine catabolic process;GO:0016787|hydrolase activity;GO:0047622|adenosine nucleosidase activity;GO:0047724|inosine nucleosidase activity;GO:0045437|uridine nucleosidase activity;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion;GO:0005829|cytosol;GO:0005886|plasma membrane | GhM_A07G2676.1,GhM_D07G2573.1,GhM_D08G2144.1,GhM_D12G0570.1,GhM_D09G0385.1,GhM_D12G2100.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G22970 | unknown protein | GO:0012505|endomembrane system | GhM_A07G2682.1,GhM_D07G2579.1,GhM_A08G0794.1,GhM_D08G0760.1,GhM_A08G2441.1,GhM_D08G2390.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G30580 | DRIP2; DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | GO:0005515|protein binding;GO:0009414|response to water deprivation;GO:0008270|zinc ion binding;GO:0004842|ubiquitin-protein ligase activity | GhM_A07G2696.1,GhM_D07G2594.1,GhM_A08G0782.1,GhM_D08G0749.1,GhM_A11G1499.1,GhM_D11G1487.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G06210 | VHS domain-containing protein / GAT domain-containing protein | GO:0005795|Golgi stack;GO:0006886|intracellular protein transport;GO:0005622|intracellular;GO:0006891|intra-Golgi vesicle-mediated transport;GO:0008565|protein transporter activity | GhM_A07G2741.1,GhM_D07G2641.1,GhM_A07G2742.1,GhM_A11G1540.1,GhM_D11G1532.1,GhM_D07G1795.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G56190 | ALPHA-SNAP2, ASNAP; ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2); binding / soluble NSF attachment protein | GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005483|soluble NSF attachment protein activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A07G2892.1,GhM_D07G2795.1,GhM_A10G2017.1,GhM_D10G0919.1,GhM_A11G0761.1,GhM_D11G0774.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G14170 | CHC1; CHC1 | GO:0048364|root development;GO:0003674|molecular_function | GhM_A07G2921.1,GhM_D07G2822.1,GhM_A09G0487.1,GhM_D09G0444.1,GhM_A10G1990.1,GhM_D10G0896.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40980 | unknown protein | GO:0008150|biological_process;GO:0031225|anchored to membrane;GO:0003674|molecular_function | GhM_A07G2939.1,GhM_D07G2840.1,GhM_A09G0615.1,GhM_D09G0471.1,GhM_A10G0816.1,GhM_D10G0828.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G19420 | Ran GTPase binding / chromatin binding / zinc ion binding | GO:0008536|Ran GTPase binding;GO:0008270|zinc ion binding;GO:0003682|chromatin binding | GhM_A08G0158.1,GhM_D08G0146.1,GhM_A09G1409.1,GhM_D09G1322.1,GhM_A10G2329.1,GhM_D10G2251.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G02090 | FUS5, CSN7, COP15, ATCSN7; FUS5 (FUSCA 5); MAP kinase kinase | GO:0010387|signalosome assembly;GO:0009640|photomorphogenesis;GO:0005634|nucleus;GO:0008180|signalosome;GO:0010388|cullin deneddylation;GO:0004708|MAP kinase kinase activity | GhM_A08G0386.1,GhM_D08G0374.1,GhM_A11G0879.1,GhM_D11G0894.1,GhM_A12G1297.1,GhM_D12G1233.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60860 | guanine nucleotide exchange family protein | GO:0005488|binding;GO:0005086|ARF guanyl-nucleotide exchange factor activity;GO:0005622|intracellular;GO:0005085|guanyl-nucleotide exchange factor activity;GO:0032012|regulation of ARF protein signal transduction | GhM_A08G0412.1,GhM_D08G0398.1,GhM_A08G1809.1,GhM_D08G1762.1,GhM_A11G0942.1,GhM_D11G0956.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G45540 | WD-40 repeat family protein / beige-related | GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0005575|cellular_component | GhM_A08G0415.1,GhM_D08G0401.1,GhM_A08G1744.1,GhM_D08G1702.1,GhM_A11G0954.1,GhM_D11G0969.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G61050 | NTMC2TYPE4, NTMC2T4; NTMC2T4; lipid binding | GO:0008289|lipid binding;GO:0005886|plasma membrane;GO:0008150|biological_process | GhM_A08G0428.1,GhM_D08G0415.1,GhM_A11G0955.1,GhM_D11G0970.1,GhM_A12G1363.1,GhM_D12G1302.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G47070 | SPL1; SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A08G0472.1,GhM_D08G0456.1,GhM_A11G1214.1,GhM_D11G1217.1,GhM_A12G1580.1,GhM_D12G1531.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G54230 | nucleic acid binding / nucleotide binding / zinc ion binding | GO:0000166|nucleotide binding;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0003676|nucleic acid binding | GhM_A08G0480.1,GhM_D08G0464.1,GhM_D12G0578.1,GhM_A08G0481.1,GhM_D08G0465.1,GhM_A12G0583.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G48840 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0489.1,GhM_D08G1163.1,GhM_A08G1254.1,GhM_A09G0702.1,GhM_D09G0648.1,GhM_D08G0472.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G25920 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 84 Blast hits to 79 proteins in 34 species: Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 12; Plants - 23; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A08G0518.1,GhM_D08G0496.1,GhM_A12G1648.1,GhM_D12G1597.1,GhM_D11G1305.1,GhM_A11G1302.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G48110 | REF4; REF4 (REDUCED EPIDERMAL FLUORESCENCE 4) | GO:0009698|phenylpropanoid metabolic process;GO:0016020|membrane | GhM_A08G0574.1,GhM_D08G0546.1,GhM_A11G1419.1,GhM_D11G1409.1,GhM_A12G0060.1,GhM_D12G0061.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G63310||AT1G03070 | glutamate binding | GO:0016595|glutamate binding;GO:0008150|biological_process;GO:0009826|unidimensional cell growth;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005575|cellular_component | GhM_A08G0583.1,GhM_D08G0554.1,GhM_A08G0815.1,GhM_D08G0776.1,GhM_A08G2435.1,GhM_D08G2383.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G22200 | POP2, GABA-T, HER1; POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase | GO:0009860|pollen tube growth;GO:0003867|4-aminobutyrate transaminase activity;GO:0006979|response to oxidative stress;GO:0006540|glutamate decarboxylation to succinate;GO:0022621|shoot system development;GO:0009450|gamma-aminobutyric acid catabolic process;GO:0046686|response to cadmium ion;GO:0010183|pollen tube guidance;GO:0034387|4-aminobutyrate:pyruvate transaminase activity;GO:0019484|beta-alanine catabolic process;GO:0005739|mitochondrion;GO:0009865|pollen tube adhesion;GO:0005886|plasma membrane;GO:0010154|fruit development;GO:0008270|zinc ion binding;GO:0010033|response to organic substance;GO:0050897|cobalt ion binding | GhM_A08G0659.1,GhM_D11G1821.1,GhM_A11G1829.1,GhM_D02G1279.1,GhM_D04G0906.1,GhM_D08G0628.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60320 | DNA binding | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A08G0744.1,GhM_D08G0711.1,GhM_A08G1869.1,GhM_D08G1820.1,GhM_A11G0876.1,GhM_D11G0892.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G31260 | APG9, ATAPG9; APG9 (autophagy 9) | GO:0006914|autophagy | GhM_A08G0764.1,GhM_D08G0733.1,GhM_A08G2460.1,GhM_D08G2410.1,GhM_A11G1528.1,GhM_D11G1516.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G02670 | AtIDD12; AtIDD12 (Arabidopsis thaliana Indeterminate(ID)-Domain 12); nucleic acid binding / transcription factor/ zinc ion binding | GO:0009507|chloroplast;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A08G0809.1,GhM_D08G0771.1,GhM_A12G0027.1,GhM_A11G1472.1,GhM_D11G1462.1,GhM_D12G0027.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G03140 | splicing factor Prp18 family protein | GO:0005681|spliceosomal complex;GO:0008380|RNA splicing | GhM_A08G0837.1,GhM_D08G0795.1,GhM_A08G2425.1,GhM_D08G2369.1,GhM_D05G2472.1,GhM_D11G2814.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G03440 | leucine-rich repeat family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction | GhM_A08G0893.1,GhM_D08G0848.1,GhM_A08G2404.1,GhM_D08G2349.1,GhM_A12G0073.1,GhM_D12G0077.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G03020 | transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0000166|nucleotide binding | GhM_A08G0894.1,GhM_D12G0078.1,GhM_A12G0074.1,GhM_D10G1917.1,GhM_A10G1208.1,GhM_D08G0849.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G47800||AT3G62700 | ATMRP4, EST3; ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4); ATPase, coupled to transmembrane movement of substances / folic acid transporter||ATMRP10; ATMRP10; ATPase, coupled to transmembrane movement of substances | GO:0008517|folic acid transporter activity;GO:0009624|response to nematode;GO:0006810|transport;GO:0009611|response to wounding;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0010118|stomatal movement;GO:0000325|plant-type vacuole;GO:0006855|drug transmembrane transport;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0005774|vacuolar membrane;GO:0005773|vacuole | GhM_A08G0946.1,GhM_D08G0903.1,GhM_A11G1347.1,GhM_D11G1345.1,GhM_A12G1702.1,GhM_D12G1651.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G53760 | tubulin family protein | GO:0005515|protein binding;GO:0040007|growth;GO:0043622|cortical microtubule organization;GO:0015631|tubulin binding;GO:0007020|microtubule nucleation;GO:0045298|tubulin complex | GhM_A08G0962.1,GhM_D08G0920.1,GhM_A11G1336.1,GhM_A08G0963.1,GhM_D08G0921.1,GhM_D11G1336.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G29950 | microtubule-associated protein | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity | GhM_A08G1021.1,GhM_D08G0971.1,GhM_A11G3133.1,GhM_D03G2030.1,GhM_A13G2723.1,GhM_D13G2613.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G57800 | FLP1, YRE, CER3, WAX2; CER3 (ECERIFERUM 3); binding / catalytic/ iron ion binding / oxidoreductase | GO:0003824|catalytic activity;GO:0005488|binding;GO:0042335|cuticle development;GO:0048235|pollen sperm cell differentiation;GO:0005506|iron ion binding;GO:0006723|cuticle hydrocarbon biosynthetic process;GO:0010025|wax biosynthetic process;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016491|oxidoreductase activity | GhM_A08G1107.1,GhM_D08G1082.1,GhM_A08G3039.1,GhM_D08G2970.1,GhM_A13G2710.1,GhM_D13G2599.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G51840 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G1256.1,GhM_D08G1160.1,GhM_A12G3210.1,GhM_D12G3098.1,GhM_D04G1804.1,GhM_D07G1981.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G23570 | SGT1A; SGT1A; protein binding | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0006952|defense response | GhM_A08G1288.1,GhM_D08G1295.1,GhM_A11G2682.1,GhM_D11G2657.1,GhM_A12G3122.1,GhM_D12G3007.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G25680 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G1303.1,GhM_D08G1287.1,GhM_A09G0626.1,GhM_D09G0565.1,GhM_A09G2217.1,GhM_D09G2124.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G25630||AT5G52470 | FIB1, FBR1, ATFIB1, ATFBR1, SKIP7; FIB1 (FIBRILLARIN 1); snoRNA binding||FIB2, ATFIB2; FIB2 (FIBRILLARIN 2); snoRNA binding | GO:0001510|RNA methylation;GO:0006364|rRNA processing;GO:0005730|nucleolus;GO:0016020|membrane;GO:0030515|snoRNA binding | GhM_A08G1304.1,GhM_D08G1285.1,GhM_A09G0516.1,GhM_D09G0558.1,GhM_A11G0132.1,GhM_D11G0128.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G43950 | OEP37, ATOEP37; OEP37; ion channel | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0006812|cation transport;GO:0009706|chloroplast inner membrane;GO:0016020|membrane;GO:0005216|ion channel activity | GhM_A08G1358.1,GhM_D08G1228.1,GhM_A11G0175.1,GhM_D11G0173.1,GhM_A12G3049.1,GhM_D12G2932.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G32860 | glycosyl hydrolase family 17 protein | GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0046658|anchored to plasma membrane;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0031225|anchored to membrane;GO:0005886|plasma membrane | GhM_A08G1468.1,GhM_D08G1389.1,GhM_A11G0199.1,GhM_D11G0198.1,GhM_A12G2978.1,GhM_D12G2865.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G10390||AT1G33260 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | GhM_A08G1492.1,GhM_D08G1362.1,GhM_A11G0192.1,GhM_D11G0190.1,GhM_D12G2890.1,GhM_A12G3004.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G62770 | AtATG18a; AtATG18a | GO:0009507|chloroplast;GO:0042594|response to starvation;GO:0003674|molecular_function;GO:0006914|autophagy;GO:0010149|senescence | GhM_A08G1598.1,GhM_A12G0102.1,GhM_A11G1359.1,GhM_D11G1356.1,GhM_D08G1549.1,GhM_D12G0111.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G61880||AT2G46660 | CYP78A6; CYP78A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP78A9; CYP78A9 (CYTOCHROME P450 78A9); monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0010154|fruit development;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A08G1689.1,GhM_D08G1639.1,GhM_A11G1162.1,GhM_D11G1171.1,GhM_A12G1504.1,GhM_D12G1443.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46270 | GBF3; GBF3 (G-BOX BINDING FACTOR 3); sequence-specific DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0043565|sequence-specific DNA binding;GO:0003700|transcription factor activity;GO:0005829|cytosol | GhM_A08G1722.1,GhM_D08G1675.1,GhM_A11G1090.1,GhM_D11G1103.1,GhM_A12G1458.1,GhM_D12G1396.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G00500||AT3G49050 | lipase class 3 family protein / calmodulin-binding heat-shock protein, putative||lipase class 3 family protein / calmodulin-binding heat-shock protein-related | GO:0012505|endomembrane system;GO:0016042|lipid catabolic process;GO:0004806|triglyceride lipase activity;GO:0005516|calmodulin binding;GO:0006629|lipid metabolic process | GhM_A08G1782.1,GhM_D08G1738.1,GhM_A09G0538.1,GhM_D09G0534.1,GhM_A12G3148.1,GhM_D12G3034.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G46060 | transmembrane protein-related | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A08G1788.1,GhM_D08G1743.1,GhM_A11G1051.1,GhM_D11G1063.1,GhM_A11G1052.1,GhM_D11G1064.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G60550||AT2G45080 | CYCP3;2; CYCP3;2 (cyclin p3;2); cyclin-dependent protein kinase||cycp3;1; cycp3;1 (cyclin p3;1); cyclin-dependent protein kinase | GO:0004693|cyclin-dependent protein kinase activity;GO:0005575|cellular_component;GO:0051726|regulation of cell cycle | GhM_A08G1846.1,GhM_D08G1797.1,GhM_A11G0907.1,GhM_D11G0922.1,GhM_A12G1279.1,GhM_D12G1211.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G32400 | TOM2A; TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding | GO:0046786|viral replication complex formation and maintenance;GO:0005515|protein binding;GO:0016020|membrane;GO:0005773|vacuole | GhM_A08G2107.1,GhM_D08G2060.1,GhM_A09G2407.1,GhM_D09G2298.1,GhM_A12G2650.1,GhM_D12G2540.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G47070 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A08G2133.1,GhM_D08G2088.1,GhM_A11G0325.1,GhM_D11G0312.1,GhM_D12G2557.1,GhM_A12G2667.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G04770||AT3G10600 | CAT7; CAT7 (CATIONIC AMINO ACID TRANSPORTER 7); cationic amino acid transmembrane transporter||ATCAT6, CAT6; CAT6 (CATIONIC AMINO ACID TRANSPORTER 6); amino acid transmembrane transporter/ basic amino acid transmembrane transporter/ cationic amino acid transmembrane transporter | GO:0009624|response to nematode;GO:0015326|cationic amino acid transmembrane transporter activity;GO:0006810|transport;GO:0015171|amino acid transmembrane transporter activity;GO:0006865|amino acid transport;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A08G2148.1,GhM_D08G2103.1,GhM_A11G0322.1,GhM_D11G0309.1,GhM_A12G2673.1,GhM_D12G2562.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G16650 | unknown protein | GO:0008150|biological_process;GO:0005794|Golgi apparatus;GO:0003674|molecular_function | GhM_A08G2212.1,GhM_D08G2166.1,GhM_A11G0305.1,GhM_D11G0290.1,GhM_A12G2713.1,GhM_D12G2599.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12240 | ATBETAFRUCT4, VAC-INV; ATBETAFRUCT4; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0009505|plant-type cell wall;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0004564|beta-fructofuranosidase activity;GO:0005773|vacuole | GhM_A08G2251.1,GhM_D08G2202.1,GhM_A12G2736.1,GhM_A09G2377.1,GhM_D09G2265.1,GhM_D12G2622.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G12110 | SMO1-1, ATSMO1, ATSMO1-1; SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic | GO:0000254|C-4 methylsterol oxidase activity;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0016126|sterol biosynthetic process | GhM_A08G2279.1,GhM_D08G2231.1,GhM_A09G2369.1,GhM_D09G2256.1,GhM_A12G2770.1,GhM_D12G2657.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12560||AT1G62980 | ATEXPA18, EXP18, ATEXP18, ATHEXP ALPHA 1.25; ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18)||ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7; ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7) | GO:0012505|endomembrane system;GO:0009826|unidimensional cell growth;GO:0009828|plant-type cell wall loosening;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0005576|extracellular region | GhM_A08G2312.1,GhM_D08G2259.1,GhM_A09G2349.1,GhM_D09G2248.1,GhM_A11G0234.1,GhM_D11G0228.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G22900 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A08G2313.1,GhM_D08G2260.1,GhM_A09G2348.1,GhM_D09G2247.1,GhM_A12G2792.1,GhM_D12G2680.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G11860 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF544 (InterPro:IPR007518), Ubiquitin interacting motif (InterPro:IPR003903); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22960.1); Has 761 Blast hits to 466 proteins in 133 species: Archae - 0; Bacteria - 44; Metazoa - 311; Fungi - 246; Plants - 57; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005829|cytosol;GO:0005886|plasma membrane | GhM_A08G2317.1,GhM_D08G2263.1,GhM_A09G2345.1,GhM_D09G2245.1,GhM_A11G0235.1,GhM_D11G0229.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G63200 | PLP9, PLA IIIB; PLP9 (PATATIN-LIKE PROTEIN 9); nutrient reservoir | GO:0045735|nutrient reservoir activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | GhM_A08G2422.1,GhM_D08G2367.1,GhM_A11G1440.1,GhM_D11G1433.1,GhM_A12G0049.1,GhM_D12G0050.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G22960 | PKP1, PKP-ALPHA; PKP-ALPHA; pyruvate kinase | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0006629|lipid metabolic process;GO:0009570|chloroplast stroma;GO:0006096|glycolysis;GO:0004743|pyruvate kinase activity | GhM_A08G2440.1,GhM_D08G2389.1,GhM_A09G2709.1,GhM_D09G2587.1,GhM_A10G1413.1,GhM_D10G1707.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G02620 | vacuolar ATPase subunit F family protein | GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0046933|hydrogen ion transporting ATP synthase activity, rotational mechanism;GO:0015986|ATP synthesis coupled proton transport;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A08G2443.1,GhM_D08G2393.1,GhM_A08G2754.1,GhM_D08G2696.1,GhM_A13G0586.1,GhM_D13G0770.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09310||AT1G56580 | unknown protein | GO:0008150|biological_process;GO:0010090|trichome morphogenesis;GO:0005575|cellular_component;GO:0048046|apoplast | GhM_A08G2643.1,GhM_D08G2587.1,GhM_A13G1551.1,GhM_D13G1433.1,GhM_A13G2354.1,GhM_D13G2255.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G23380 | KNAT6, KNAT6L, KNAT6S; KNAT6; DNA binding / transcription activator/ transcription factor | GO:0005634|nucleus | GhM_A08G2651.1,GhM_D08G2596.1,GhM_A13G1535.1,GhM_A11G3429.1,GhM_D11G3340.1,GhM_D13G1419.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09240 | NAS3, ATNAS3; NAS3 (NICOTIANAMINE SYNTHASE 3); nicotianamine synthase | GO:0030418|nicotianamine biosynthetic process;GO:0030410|nicotianamine synthase activity | GhM_A08G2652.1,GhM_D08G2597.1,GhM_A11G3428.1,GhM_D11G3339.1,GhM_A13G2351.1,GhM_D13G2251.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G27030||AT3G16830 | TPR2; TPR2 (TOPLESS-RELATED 2)||TPR3; TPR3 (TOPLESS-RELATED 3) | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0010072|primary shoot apical meristem specification | GhM_A08G2672.1,GhM_D08G2616.1,GhM_A09G0897.1,GhM_D09G0834.1,GhM_A10G2102.1,GhM_D10G2039.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G05640||AT5G27930 | protein phosphatase 2C, putative / PP2C, putative | GO:0005575|cellular_component;GO:0004722|protein serine/threonine phosphatase activity;GO:0003824|catalytic activity;GO:0009414|response to water deprivation | GhM_A08G2674.1,GhM_D08G2618.1,GhM_A11G3389.1,GhM_D11G3300.1,GhM_A13G1509.1,GhM_D13G1394.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G09020 | SNF4, ATSNF4; SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator | GO:0030295|protein kinase activator activity;GO:0042149|cellular response to glucose starvation | GhM_A08G2699.1,GhM_D08G2640.1,GhM_A11G3340.1,GhM_D11G3253.1,GhM_A11G3737.1,GhM_D11G3659.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G55520 | TBP2, ATTBP2; TBP2 (TATA BINDING PROTEIN 2); DNA binding / RNA polymerase II transcription factor/ TATA-binding protein binding | GO:0005634|nucleus;GO:0003677|DNA binding;GO:0006352|transcription initiation;GO:0017025|TATA-binding protein binding;GO:0003702|RNA polymerase II transcription factor activity | GhM_A08G2739.1,GhM_A11G3241.1,GhM_A13G2304.1,GhM_D08G2681.1,GhM_D11G3163.1,GhM_D13G2192.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G08790 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2757.1,GhM_D08G2699.1,GhM_A11G3128.1,GhM_D11G3064.1,GhM_A13G2278.1,GhM_D13G2163.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G03860 | ATAPRL5; ATAPRL5 (APR-like 5) | GO:0012505|endomembrane system;GO:0045454|cell redox homeostasis | GhM_A08G2793.1,GhM_D08G2737.1,GhM_A11G2925.1,GhM_D11G2863.1,GhM_A11G3793.1,GhM_D11G3711.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G03810 | EDA30; EDA30 (embryo sac development arrest 30) | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0006499|N-terminal protein myristoylation;GO:0048868|pollen tube development;GO:0010197|polar nucleus fusion | GhM_A08G2796.1,GhM_D08G2741.1,GhM_A11G2895.1,GhM_D11G2847.1,GhM_A13G2194.1,GhM_D13G2080.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G73230||AT1G17880 | nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative||nascent polypeptide-associated complex (NAC) domain-containing protein | GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2945.1,GhM_D10G0559.1,GhM_A10G0584.1,GhM_D08G2883.1,GhM_A11G3223.1,GhM_D11G3144.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G63980 | SAL1, ALX8, ATSAL1, HOS2, FRY1; SAL1; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase | GO:0006401|RNA catabolic process;GO:0006790|sulfur metabolic process;GO:0019204|nucleotide phosphatase activity;GO:0008441|3'(2'),5'-bisphosphate nucleotidase activity;GO:0048573|photoperiodism, flowering;GO:0051512|positive regulation of unidimensional cell growth;GO:0009628|response to abiotic stimulus;GO:0009570|chloroplast stroma;GO:0043157|response to cation stress;GO:0005737|cytoplasm;GO:0009416|response to light stimulus;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway;GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0016481|negative regulation of transcription;GO:0009968|negative regulation of signal transduction;GO:0009409|response to cold | GhM_A09G0055.1,GhM_D09G0049.1,GhM_A09G0267.1,GhM_D09G0244.1,GhM_A10G1970.1,GhM_D10G1181.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40740 | unknown protein | GO:0008150|biological_process | GhM_A09G0454.1,GhM_D09G0414.1,GhM_A10G2011.1,GhM_D10G0915.1,GhM_A11G0757.1,GhM_D11G0769.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G40810 | cytochrome c1, putative | GO:0005746|mitochondrial respiratory chain;GO:0045153|electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity;GO:0020037|heme binding;GO:0005750|mitochondrial respiratory chain complex III;GO:0005739|mitochondrion;GO:0005506|iron ion binding;GO:0016020|membrane;GO:0005773|vacuole;GO:0009055|electron carrier activity | GhM_A09G0468.1,GhM_D09G0428.1,GhM_A09G1140.1,GhM_D09G1067.1,GhM_A10G2004.1,GhM_D10G0907.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G23760 | heavy-metal-associated domain-containing protein | GO:0046872|metal ion binding;GO:0005575|cellular_component;GO:0030001|metal ion transport | GhM_A09G0529.1,GhM_D09G0548.1,GhM_A12G2826.1,GhM_D12G2715.1,GhM_A12G3160.1,GhM_D12G3044.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G52400 | CYP715A1; CYP715A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A09G0534.1,GhM_D12G3039.1,GhM_A09G2211.1,GhM_D09G2116.1,GhM_A12G3155.1,GhM_D09G0539.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G62150 | peptidoglycan-binding LysM domain-containing protein | GO:0016998|cell wall macromolecule catabolic process;GO:0003674|molecular_function;GO:0012505|endomembrane system | GhM_A09G0593.1,GhM_D09G0493.1,GhM_A09G2187.1,GhM_D09G2101.1,GhM_A12G3207.1,GhM_D12G3093.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G25855 | unknown protein | GO:0005575|cellular_component | GhM_A09G0691.1,GhM_D09G0632.1,GhM_A09G2165.1,GhM_D09G2079.1,GhM_A12G2162.1,GhM_D12G2065.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G00590 | asparaginase 2 family protein | GO:0016787|hydrolase activity | GhM_A09G0787.1,GhM_A11G1005.1,GhM_D11G1020.1,GhM_D02G1140.1,GhM_D11G3050.1,GhM_D02G1772.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G06930 | ATPRMT4B, PRMT4B; protein arginine N-methyltransferase family protein | GO:0019919|peptidyl-arginine methylation, to asymmetrical-dimethyl arginine;GO:0008168|methyltransferase activity;GO:0005634|nucleus;GO:0016277|[myelin basic protein]-arginine N-methyltransferase activity;GO:0005737|cytoplasm;GO:0042803|protein homodimerization activity;GO:0009909|regulation of flower development;GO:0035242|protein-arginine omega-N asymmetric methyltransferase activity;GO:0008469|histone-arginine N-methyltransferase activity;GO:0046982|protein heterodimerization activity;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0035241|protein-arginine omega-N monomethyltransferase activity | GhM_A09G0884.1,GhM_D09G2770.1,GhM_A09G2908.1,GhM_D10G1996.1,GhM_A10G2058.1,GhM_D09G0820.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G16850 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0005975|carbohydrate metabolic process;GO:0009505|plant-type cell wall;GO:0004650|polygalacturonase activity;GO:0005773|vacuole | GhM_A09G0898.1,GhM_D09G0835.1,GhM_A09G2875.1,GhM_D09G2748.1,GhM_A10G2103.1,GhM_D10G2040.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G16920||AT1G05850 | chitinase||POM1, ERH2, ELP1, CTL1, ELP, HOT2, ATCTL1; POM1 (POM-POM1); chitinase | GO:0012505|endomembrane system;GO:0010053|root epidermal cell differentiation;GO:0009825|multidimensional cell growth;GO:0010337|regulation of salicylic acid metabolic process;GO:0009735|response to cytokinin stimulus;GO:0016051|carbohydrate biosynthetic process;GO:0009408|response to heat;GO:0009809|lignin biosynthetic process;GO:0009651|response to salt stress;GO:0004568|chitinase activity;GO:0009414|response to water deprivation | GhM_A09G0913.1,GhM_D09G0848.1,GhM_A10G0063.1,GhM_D10G0050.1,GhM_D10G2087.1,GhM_A10G2151.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06580 | FAD linked oxidase family protein | GO:0008720|D-lactate dehydrogenase activity;GO:0005739|mitochondrion;GO:0008891|glycolate oxidase activity;GO:0019154|glycolate dehydrogenase activity;GO:0005524|ATP binding | GhM_A09G1666.1,GhM_D09G1568.1,GhM_D05G4326.1,GhM_A11G0732.1,GhM_D10G0653.1,GhM_D02G0862.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06390 | FLA17; FLA17 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR) | GO:0007155|cell adhesion;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A09G1672.1,GhM_D09G1574.1,GhM_A10G2493.1,GhM_D10G2411.1,GhM_A13G0042.1,GhM_D13G0044.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G57820 | VIM1, ORTH2; VIM1 (VARIANT IN METHYLATION 1); DNA binding / chromatin binding / double-stranded methylated DNA binding / histone binding / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / ubiquitin-protein ligase | GO:0051301|cell division;GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0031508|centromeric heterochromatin formation;GO:0042393|histone binding;GO:0010429|methyl-CpNpN binding;GO:0008327|methyl-CpG binding;GO:0003682|chromatin binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0010385|double-stranded methylated DNA binding;GO:0010369|chromocenter;GO:0032776|DNA methylation on cytosine;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0006325|chromatin organization | GhM_A09G2147.1,GhM_D09G2060.1,GhM_A11G0046.1,GhM_D11G0048.1,GhM_A12G3281.1,GhM_D12G3168.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G25700 | BETA-OHASE 1, B1, chy1; BETA-OHASE 1 (BETA-HYDROXYLASE 1); carotene beta-ring hydroxylase | GO:0009507|chloroplast;GO:0016119|carotene metabolic process;GO:0016123|xanthophyll biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0010291|carotene beta-ring hydroxylase activity | GhM_A09G2220.1,GhM_D09G2127.1,GhM_A12G3135.1,GhM_A12G2867.1,GhM_D12G2758.1,GhM_D12G3021.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G24650 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005744|mitochondrial inner membrane presequence translocase complex;GO:0005773|vacuole;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0008565|protein transporter activity | GhM_A09G2268.1,GhM_D09G2174.1,GhM_A11G0190.1,GhM_D11G0188.1,GhM_A12G3007.1,GhM_D12G2893.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G12310 | calmodulin, putative | GO:0008150|biological_process;GO:0005509|calcium ion binding;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0005886|plasma membrane | GhM_A09G2371.1,GhM_D09G2258.1,GhM_A11G4053.1,GhM_D11G3950.1,GhM_A12G2763.1,GhM_D12G2650.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G06900||AT2G45580 | CYP93D1; CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C3; CYP76C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A09G2431.1,GhM_A13G1641.1,GhM_D13G1548.1,GhM_A13G1670.1,GhM_A13G1671.1,GhM_D09G2313.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G59280 | TXR1; TXR1 (THAXTOMIN A RESISTANT 1) | GO:0008150|biological_process | GhM_A09G2544.1,GhM_D09G2425.1,GhM_A10G1682.1,GhM_D10G1438.1,GhM_A12G2462.1,GhM_D12G2347.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G05960 | binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005488|binding | GhM_A09G2550.1,GhM_D09G2431.1,GhM_A10G1702.1,GhM_D10G1422.1,GhM_D12G0728.1,GhM_D09G0739.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G17205 | UPL6; UPL6 (UBIQUITIN PROTEIN LIGASE 6); ubiquitin-protein ligase | GO:0000151|ubiquitin ligase complex;GO:0005622|intracellular;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0006464|protein modification process | GhM_A09G2940.1,GhM_D09G2801.1,GhM_A10G2213.1,GhM_D10G2143.1,GhM_A12G1129.1,GhM_D09G2891.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G09760 | pectinesterase family protein | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0042545|cell wall modification;GO:0004857|enzyme inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | GhM_A10G0933.1,GhM_D10G1153.1,GhM_A11G0669.1,GhM_D11G0678.1,GhM_A11G2779.1,GhM_D11G2683.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64660 | ATCMPG2, CMPG2; U-box domain-containing protein | GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0010200|response to chitin;GO:0004842|ubiquitin-protein ligase activity | GhM_A10G0947.1,GhM_D10G1149.1,GhM_A11G0667.1,GhM_D11G0676.1,GhM_A11G2760.1,GhM_D11G2714.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G64816 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G0954.1,GhM_D10G1127.1,GhM_A11G0644.1,GhM_D11G0653.1,GhM_A11G2321.1,GhM_D11G2633.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G39900 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G0961.1,GhM_D10G1119.1,GhM_A11G2367.1,GhM_D11G2523.1,GhM_A12G0984.1,GhM_D12G0920.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G10030||AT5G65210 | TGA4, OBF4; TGA4 (TGACG MOTIF-BINDING FACTOR 4); DNA binding / calmodulin binding / transcription factor||TGA1; TGA1; DNA binding / calmodulin binding / transcription factor | GO:0005634|nucleus;GO:0005516|calmodulin binding;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0042742|defense response to bacterium;GO:0009409|response to cold | GhM_A10G0972.1,GhM_D10G1110.1,GhM_A11G2327.1,GhM_D11G2585.1,GhM_A12G1136.1,GhM_D12G1161.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G22460||AT5G65340 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G0988.1,GhM_D10G1094.1,GhM_A11G2416.1,GhM_D11G2472.1,GhM_A12G1173.1,GhM_D12G0937.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G67070 | RALFL34; RALFL34 (ralf-like 34); signal transducer | GO:0007267|cell-cell signaling;GO:0004871|signal transducer activity;GO:0048046|apoplast | GhM_A10G1043.1,GhM_D10G1043.1,GhM_D11G2226.1,GhM_A11G2256.1,GhM_A12G0852.1,GhM_D12G1089.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66850 | MAPKKK5; MAPKKK5; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A10G1057.1,GhM_D10G1028.1,GhM_A11G0560.1,GhM_D11G0553.1,GhM_A12G0814.1,GhM_D12G0796.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66870 | ASL1, LBD36; ASL1 | GO:0009965|leaf morphogenesis;GO:0045449|regulation of transcription;GO:0048441|petal development;GO:0009954|proximal/distal pattern formation;GO:0005575|cellular_component | GhM_A10G1060.1,GhM_D10G1027.1,GhM_A11G2217.1,GhM_D11G2192.1,GhM_A12G0812.1,GhM_D12G0794.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G50810||AT4G37235 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A10G1074.1,GhM_D10G1014.1,GhM_A11G2191.1,GhM_D11G2165.1,GhM_D05G3991.1,GhM_D06G1139.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G18280 | AtTLP2; AtTLP2 (TUBBY LIKE PROTEIN 2); phosphoric diester hydrolase/ transcription factor | GO:0008081|phosphoric diester hydrolase activity;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A10G1095.1,GhM_D10G0998.1,GhM_A11G0535.1,GhM_D11G0521.1,GhM_A12G0738.1,GhM_D12G0726.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36220 | FAH1, CYP84A1; FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase | GO:0046424|ferulate 5-hydroxylase activity;GO:0005783|endoplasmic reticulum;GO:0009809|lignin biosynthetic process;GO:0010224|response to UV-B;GO:0004497|monooxygenase activity;GO:0009699|phenylpropanoid biosynthetic process | GhM_A10G1114.1,GhM_D10G0982.1,GhM_A11G0528.1,GhM_D11G0512.1,GhM_A11G2080.1,GhM_D11G2062.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G51160 | MUR1, MUR_1, GMD2; MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase | GO:0009826|unidimensional cell growth;GO:0005829|cytosol;GO:0042351|'de novo' GDP-L-fucose biosynthetic process;GO:0008446|GDP-mannose 4,6-dehydratase activity | GhM_A10G1119.1,GhM_A11G2059.1,GhM_D11G2042.1,GhM_A12G0687.1,GhM_D12G0683.1,GhM_D10G0977.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G51895 | SULTR3;1, AST12; SULTR3;1 (SULFATE TRANSPORTER 3;1); secondary active sulfate transmembrane transporter/ sulfate transmembrane transporter/ transporter | GO:0006810|transport;GO:0008271|secondary active sulfate transmembrane transporter activity;GO:0008272|sulfate transport;GO:0015116|sulfate transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity;GO:0016021|integral to membrane | GhM_A10G1409.1,GhM_D10G1712.1,GhM_A11G1467.1,GhM_D11G1459.1,GhM_A12G0034.1,GhM_D12G0033.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G04240 | SEC; SEC (secret agent); transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0006493|protein amino acid O-linked glycosylation | GhM_A10G1611.1,GhM_D10G1500.1,GhM_A11G3052.1,GhM_D11G2981.1,GhM_A13G2231.1,GhM_D13G2119.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G17070 | D111/G-patch domain-containing protein | GO:0008150|biological_process;GO:0005622|intracellular;GO:0003676|nucleic acid binding | GhM_A10G2315.1,GhM_A11G2752.1,GhM_A10G2333.1,GhM_D11G2718.1,GhM_D10G2240.1,GhM_D10G2254.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G32180 | ATPANK2; ATPANK2 (PANTOTHENATE KINASE 2); pantothenate kinase | GO:0004594|pantothenate kinase activity;GO:0005515|protein binding;GO:0015937|coenzyme A biosynthetic process | GhM_A11G0013.1,GhM_D11G0015.1,GhM_A12G1877.1,GhM_D12G1808.1,GhM_A12G3349.1,GhM_D12G3233.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G01710 | CRK, ARPC5; CRK (CROOKED); actin binding | GO:0009825|multidimensional cell growth;GO:0005885|Arp2/3 protein complex;GO:0010090|trichome morphogenesis;GO:0030041|actin filament polymerization;GO:0030036|actin cytoskeleton organization;GO:0007015|actin filament organization;GO:0003779|actin binding | GhM_A11G0229.1,GhM_D11G0223.1,GhM_A12G1291.1,GhM_D12G1226.1,GhM_A13G2252.1,GhM_D13G2141.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G18060 | VND1, ANAC037; VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0010200|response to chitin;GO:0005575|cellular_component | GhM_A11G0511.1,GhM_D11G0493.1,GhM_A11G2067.1,GhM_D11G2046.1,GhM_A12G0688.1,GhM_D12G0685.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G66200 | ARO2; ARO2 (ARMADILLO REPEAT ONLY 2); binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005488|binding | GhM_A11G0517.1,GhM_D11G0500.1,GhM_A11G2033.1,GhM_D11G2020.1,GhM_A12G0674.1,GhM_D12G0676.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G50220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A11G0575.1,GhM_D11G0570.1,GhM_A11G2290.1,GhM_D11G2258.1,GhM_A12G0869.1,GhM_D12G1077.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G37540||AT3G49940 | LBD39; LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)||LBD38; LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38) | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A11G0587.1,GhM_D11G0582.1,GhM_A11G2579.1,GhM_D11G2321.1,GhM_A12G0891.1,GhM_D12G1048.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G65660 | hydroxyproline-rich glycoprotein family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A11G0602.1,GhM_D11G0597.1,GhM_A11G2488.1,GhM_D11G2402.1,GhM_A12G1087.1,GhM_D12G0963.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G10010 | unknown protein | GO:0008150|biological_process;GO:0005730|nucleolus;GO:0003674|molecular_function | GhM_A11G0640.1,GhM_D11G0648.1,GhM_A11G2311.1,GhM_D11G2590.1,GhM_A12G1139.1,GhM_D12G1159.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G44750 | ATPUP11; ATPUP11; purine transmembrane transporter | GO:0016020|membrane;GO:0006863|purine transport;GO:0005345|purine transmembrane transporter activity | GhM_A11G0860.1,GhM_D11G0875.1,GhM_A12G1325.1,GhM_D12G1261.1,GhM_A12G1636.1,GhM_D12G2343.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT2G45720 | armadillo/beta-catenin repeat family protein | GO:0005488|binding | GhM_A11G0983.1,GhM_D11G0996.1,GhM_A12G1381.1,GhM_D08G1714.1,GhM_D12G1325.1,GhM_D12G1324.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G02460 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | GhM_A11G1252.1,GhM_D11G1255.1,GhM_A12G1595.1,GhM_D12G1542.1,GhM_A13G2366.1,GhM_D13G2267.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G26980||AT3G05710 | SYP41, ATSYP41, ATTLG2A; SYP41 (SYNTAXIN OF PLANTS 41); SNAP receptor||SYP43, ATSYP43; SYP43 (SYNTAXIN OF PLANTS 43); SNAP receptor | GO:0006944|cellular membrane fusion;GO:0005802|trans-Golgi network;GO:0006886|intracellular protein transport;GO:0030140|trans-Golgi network transport vesicle;GO:0016020|membrane;GO:0005484|SNAP receptor activity | GhM_A11G1317.1,GhM_D11G1319.1,GhM_D13G1402.1,GhM_A11G3399.1,GhM_D11G3311.1,GhM_A13G1518.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G66730 | ATP dependent DNA ligase family protein | GO:0009507|chloroplast;GO:0006281|DNA repair;GO:0006260|DNA replication;GO:0003677|DNA binding;GO:0003910|DNA ligase (ATP) activity;GO:0006310|DNA recombination;GO:0005524|ATP binding | GhM_A11G1879.1,GhM_D11G1867.1,GhM_A11G1944.1,GhM_D11G1933.1,GhM_D11G1931.1,GhM_D11G1932.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT4G36945||AT3G19310||AT1G49740 | phospholipase C/ phosphoric diester hydrolase | GO:0008081|phosphoric diester hydrolase activity;GO:0004629|phospholipase C activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | GhM_A11G2263.1,GhM_D11G2230.1,GhM_D12G0261.1,GhM_A12G0251.1,GhM_A13G0453.1,GhM_D13G0444.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G18100||AT1G08830 | CSD3; CSD3 (copper/zinc superoxide dismutase 3); superoxide dismutase||CSD1; CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1); superoxide dismutase | GO:0046688|response to copper ion;GO:0006979|response to oxidative stress;GO:0005777|peroxisome;GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0004784|superoxide dismutase activity;GO:0010193|response to ozone;GO:0019430|removal of superoxide radicals;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0005829|cytosol;GO:0010039|response to iron ion;GO:0042742|defense response to bacterium;GO:0005773|vacuole | GhM_A11G2901.1,GhM_D11G2858.1,GhM_A13G1365.1,GhM_D13G1265.1,GhM_A13G2201.1,GhM_D13G2089.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G08570 | ACHT4; ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | GO:0009507|chloroplast;GO:0045454|cell redox homeostasis;GO:0031969|chloroplast membrane;GO:0009570|chloroplast stroma;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor | GhM_A11G3009.1,GhM_D11G2937.1,GhM_A13G1375.1,GhM_D13G1275.1,GhM_A13G2211.1,GhM_D13G2098.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G04340 | emb2458; emb2458 (embryo defective 2458); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0009793|embryonic development ending in seed dormancy;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A11G3079.1,GhM_D11G3012.1,GhM_D07G1941.1,GhM_D07G2349.1,GhM_D08G2027.1,GhM_D04G0783.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G08630 | THA1; THA1 (Threonine Aldolase 1); aldehyde-lyase/ threonine aldolase | GO:0006567|threonine catabolic process;GO:0004793|threonine aldolase activity;GO:0005575|cellular_component;GO:0016832|aldehyde-lyase activity | GhM_A11G3107.1,GhM_D11G3039.1,GhM_A11G3788.1,GhM_D11G3707.1,GhM_A13G2250.1,GhM_D13G2139.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G04590 | DNA-binding family protein | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A11G3156.1,GhM_D11G3081.1,GhM_A11G3782.1,GhM_D11G3701.1,GhM_D13G2156.1,GhM_A13G2267.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G18150 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A11G3259.1,GhM_D11G3179.1,GhM_A11G3749.1,GhM_D11G3671.1,GhM_A13G2306.1,GhM_D13G2194.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G56220 | dormancy/auxin associated family protein | GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G3370.1,GhM_D11G3282.1,GhM_A11G3727.1,GhM_D11G3649.1,GhM_D13G2227.1,GhM_A13G2336.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G56340 | CRT1; CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0006979|response to oxidative stress;GO:0009507|chloroplast;GO:0005509|calcium ion binding;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | GhM_A11G3422.1,GhM_D11G3334.1,GhM_A13G1533.1,GhM_D13G1417.1,GhM_A13G2347.1,GhM_D13G2238.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G67960||AT4G17020 | transcription factor-related||EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 243 Blast hits to 229 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 87; Plants - 18; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink). | ;GO:0012505|endomembrane system;GO:0005634|nucleus;GO:0006281|DNA repair;GO:0006355|regulation of transcription, DNA-dependent;GO:0003702|RNA polymerase II transcription factor activity | GhM_A12G2007.1,GhM_D12G1916.1,GhM_A13G0310.1,GhM_D13G0296.1,GhM_D13G1647.1,GhM_D06G1634.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G26190||AT1G73980 | phosphoribulokinase/uridine kinase family protein | GO:0008152|metabolic process;GO:0016773|phosphotransferase activity, alcohol group as acceptor;GO:0005575|cellular_component;GO:0009058|biosynthetic process;GO:0004016|adenylate cyclase activity;GO:0006171|cAMP biosynthetic process;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A12G2043.1,GhM_D12G1949.1,GhM_A12G2349.1,GhM_D12G2245.1,GhM_A13G1272.1,GhM_D13G1049.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G26749 | nucleic acid binding / zinc ion binding | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A13G0331.1,GhM_D13G0318.1,GhM_D11G2406.1,GhM_D04G1021.1,GhM_D01G1908.1,GhM_D01G1767.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G16350 | inosine-5'-monophosphate dehydrogenase, putative | GO:0008152|metabolic process;GO:0006177|GMP biosynthetic process;GO:0003824|catalytic activity;GO:0003938|IMP dehydrogenase activity;GO:0005575|cellular_component | GhM_A13G2701.1,GhM_D13G2589.1,GhM_A13G2803.1,GhM_D13G2690.1,GhM_D02G0800.1,GhM_A13G2804.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G58030||AT5G38840 | transport protein particle (TRAPP) component Bet3 family protein||forkhead-associated domain-containing protein / FHA domain-containing protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0016020|membrane;GO:0006888|ER to Golgi vesicle-mediated transport | GhM_D01G1303.1,GhM_D11G3148.1,GhM_D06G1489.1,GhM_D02G1109.1,GhM_D06G0948.1,GhM_D04G1381.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G60620 | ATRPAC43; ATRPAC43; DNA binding / DNA-directed RNA polymerase/ protein dimerization | GO:0005634|nucleus;GO:0003899|DNA-directed RNA polymerase activity;GO:0003677|DNA binding;GO:0046983|protein dimerization activity;GO:0006350|transcription | GhM_D01G1808.1,GhM_D03G0880.1,GhM_D02G1882.1,GhM_D11G2641.1,GhM_D01G1810.1,GhM_D05G4340.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT5G11170 | ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding | GO:0046686|response to cadmium ion;GO:0005730|nucleolus;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_D01G1953.1,GhM_D10G2021.1,GhM_D05G3769.1,GhM_D10G2081.1,GhM_D10G2442.1,GhM_D12G2016.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT3G24515 | UBC37; UBC37 (ubiquitin-conjugating enzyme 37); small conjugating protein ligase/ ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity | GhM_D02G1330.1,GhM_D13G0303.1,GhM_D03G0703.1,GhM_D06G1457.1,GhM_D08G1485.1,GhM_D11G2625.1 | 6 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D03G1495.1,GhM_D06G1733.1,GhM_D04G1056.1,GhM_D06G1673.1,GhM_D05G3698.1,GhM_D13G1748.1 | 6 | 0 | Gossypium | Cotton | |||
| - | AT1G24793 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | GO:0009245|lipid A biosynthetic process;GO:0008759|UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | GhM_D07G1609.1,GhM_D10G2282.1,GhM_D08G1347.1,GhM_D13G1666.1,GhM_D11G2620.1,GhM_D11G2975.1 | 6 | 0 | Gossypium | Cotton | |||
| TA1071:GhM_A07G0945.1,GhM_A07G0946.1,GhM_A07G0948.1 | AT4G37370||AT1G27510 | CYP81D8; CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||INVOLVED IN: response to singlet oxygen; LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: EX1 (EXECUTER1) (TAIR:AT4G33630.2); Has 213 Blast hits to 208 proteins in 76 species: Archae - 0; Bacteria - 13; Metazoa - 63; Fungi - 31; Plants - 69; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). | GO:0000304|response to singlet oxygen;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0042651|thylakoid membrane;GO:0005506|iron ion binding;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D07G0943.1,GhM_A03G1191.1,GhM_A05G3224.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1222:GhM_A10G2962.1,GhM_A10G2963.1 | AT2G40080||AT2G29950||AT2G06255 | ELF4; ELF4 (EARLY FLOWERING 4)||ELF4-L1; ELF4-L1 (ELF4-Like 1)||ELF4-L3; ELF4-L3 (ELF4-Like 3) | GO:0008150|biological_process;GO:0009648|photoperiodism;GO:0010017|red or far-red light signaling pathway;GO:0005634|nucleus;GO:0003674|molecular_function;GO:0010114|response to red light;GO:0042753|positive regulation of circadian rhythm;GO:0009909|regulation of flower development;GO:0005575|cellular_component;GO:0048573|photoperiodism, flowering | GhM_A06G2142.1,GhM_D10G2913.1,GhM_D06G2129.1,GhM_D02G1624.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1290:GhM_A11G2811.1,GhM_A11G2812.1 | AT1G17370 | UBP1B; UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | GO:0003730|mRNA 3'-UTR binding | GhM_A06G1542.1,GhM_A12G2083.1,GhM_D02G1312.1,GhM_D03G0916.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1384:GhM_A12G1237.1,GhM_A12G1238.1 | ATCG00470 | ATPE; ATPase epsilon subunit | GO:0009579|thylakoid;GO:0009507|chloroplast | GhM_A11G1771.1,GhM_A12G2241.1,GhM_D12G2145.1,GhM_Scaf185G308.1 | 6 | 1 | Gossypium | Cotton | |||
| TA141:GhM_D01G0508.1,GhM_D01G0509.1,GhM_D01G0510.1,GhM_D01G0511.1,GhM_D01G0512.1,GhM_D01G0513.1 | AT1G47890||AT1G45616||AT2G15080||AT5G25910 | AtRLP52; AtRLP52 (Receptor Like Protein 52); kinase/ protein binding||AtRLP7; AtRLP7 (Receptor Like Protein 7); kinase/ protein binding||AtRLP19; AtRLP19 (Receptor Like Protein 19); kinase/ protein binding||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0016020|membrane | - | 6 | 1 | Gossypium | Cotton | |||
| TA1651:GhM_D02G0408.1,GhM_D02G0413.1 | AT4G24000||AT1G55850 | ATCSLG2, CSLG2; ATCSLG2; cellulose synthase/ transferase/ transferase, transferring glycosyl groups||ATCSLE1, CSLE1; ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups | GO:0009832|plant-type cell wall biogenesis;GO:0016759|cellulose synthase activity;GO:0030244|cellulose biosynthetic process;GO:0000271|polysaccharide biosynthetic process;GO:0016740|transferase activity;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A02G0394.1,GhM_A02G0395.1,GhM_A02G0396.1,GhM_A02G0405.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1786:GhM_D03G1926.1,GhM_D03G1927.1 | AT1G12110 | NRT1.1, CHL1-1, NRT1, B-1, ATNRT1, CHL1; NRT1.1; nitrate transmembrane transporter/ transporter | GO:0005886|plasma membrane | GhM_A03G0170.1,GhM_A08G2238.1,GhM_D08G2186.1,GhM_D12G2629.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1794:GhM_D04G0036.1,GhM_D04G0037.1 | AT5G59220||AT3G11410 | ATPP2CA, AHG3, PP2CA; PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase||protein phosphatase 2C, putative / PP2C, putative | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0009737|response to abscisic acid stimulus;GO:0008287|protein serine/threonine phosphatase complex;GO:0004721|phosphoprotein phosphatase activity;GO:0009788|negative regulation of abscisic acid mediated signaling pathway;GO:0010119|regulation of stomatal movement;GO:0009414|response to water deprivation;GO:0004722|protein serine/threonine phosphatase activity;GO:0009738|abscisic acid mediated signaling pathway;GO:0009409|response to cold | GhM_A12G3082.1,GhM_D12G2965.1,GhM_A09G2237.1,GhM_A05G4908.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2015:GhM_D06G0301.1,GhM_D06G0309.1 | AT1G59540 | ZCF125; ZCF125; ATP binding / microtubule motor | GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0005524|ATP binding | GhM_A02G0964.1,GhM_A06G0267.1,GhM_D02G0958.1,GhM_D06G0267.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2024:GhM_D06G0543.1,GhM_D06G0560.1 | AT1G11040||AT5G25530 | DNAJ heat shock protein, putative||DNAJ chaperone C-terminal domain-containing protein | GO:0051082|unfolded protein binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A06G0531.1,GhM_A05G0119.1,GhM_A06G0551.1,GhM_D05G0124.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2046:GhM_D06G1585.1,GhM_D06G1586.1 | AT4G05120 | ENT3, FUR1, ATENT3; FUR1 (FUDR RESISTANT 1); nucleoside transmembrane transporter | GO:0005886|plasma membrane | GhM_A06G1620.1,GhM_A11G3600.1,GhM_D11G3508.1,GhM_D13G0714.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2159:GhM_A01G1763.1,GhM_A01G1767.1 | AT1G65780||AT5G37150||AT1G65810 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: tRNA-splicing endonuclease positive effector-related (TAIR:AT5G52090.1); Has 4236 Blast hits to 3442 proteins in 554 species: Archae - 133; Bacteria - 787; Metazoa - 1285; Fungi - 856; Plants - 359; Viruses - 41; Other Eukaryotes - 775 (source: NCBI BLink).||tRNA-splicing endonuclease positive effector-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D12G0142.1,GhM_D01G2581.1,GhM_D01G1746.1,GhM_D01G1750.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2163:GhM_A01G1852.1,GhM_A01G1853.1 | AT1G50300 | TAF15; TAF15 (TBP-associated factor 15); RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_D01G1761.1,GhM_D07G1283.1,GhM_D08G1912.1,GhM_D08G1913.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2186:GhM_A01G2370.1,GhM_A01G2371.1 | AT1G21550 | calcium-binding protein, putative | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005509|calcium ion binding | GhM_D01G2316.1,GhM_D02G0823.1,GhM_A02G0833.1,GhM_A05G2667.1 | 6 | 1 | Gossypium | Cotton | |||
| TA228:GhM_D03G1945.1,GhM_D03G1947.1,GhM_D03G1948.1,GhM_D03G1953.1,GhM_D03G1954.1 | AT1G17615||AT5G36930 | disease resistance protein (TIR-NBS class), putative||disease resistance protein (TIR-NBS-LRR class), putative | GO:0004888|transmembrane receptor activity;GO:0005515|protein binding;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0006915|apoptosis;GO:0006952|defense response;GO:0007165|signal transduction;GO:0005524|ATP binding | GhM_D11G2961.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2372:GhM_D09G0284.1,GhM_D09G0285.1 | AT3G28450||AT1G27190 | leucine-rich repeat transmembrane protein kinase, putative | GO:0009507|chloroplast;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0005634|nucleus;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A09G0311.1,GhM_A05G4331.1,GhM_A11G0792.1,GhM_D11G0810.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2464:GhM_D10G0785.1,GhM_D10G0786.1 | AT5G25460||AT5G11420 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25460.1); Has 185 Blast hits to 157 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 185; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005618|cell wall;GO:0009505|plant-type cell wall;GO:0003674|molecular_function | GhM_A06G2425.1,GhM_A07G0482.1,GhM_A10G0855.1,GhM_D06G2423.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2495:GhM_D10G2099.1,GhM_D10G2100.1 | AT5G49460||AT3G06650 | ACLB-1; ACLB-1; ATP citrate synthase||ACLB-2; ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2); ATP citrate synthase | GO:0006085|acetyl-CoA biosynthetic process;GO:0009346|citrate lyase complex;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0003878|ATP citrate synthase activity;GO:0016020|membrane | GhM_A01G0315.1,GhM_A10G2173.1,GhM_D01G0297.1,GhM_D09G2650.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2514:GhM_D10G2526.1,GhM_D10G2529.1 | AT1G48850 | EMB1144; EMB1144 (embryo defective 1144); chorismate synthase | GO:0009507|chloroplast;GO:0009793|embryonic development ending in seed dormancy;GO:0009073|aromatic amino acid family biosynthetic process;GO:0004107|chorismate synthase activity;GO:0005730|nucleolus | GhM_A05G3377.1,GhM_A10G2614.1,GhM_D05G3349.1,GhM_D10G2527.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2649:GhM_D11G3482.1,GhM_D11G3486.1 | ATCG00640 | RPL33; encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex | GO:0009507|chloroplast | GhM_A06G1650.1,GhM_A10G2727.1,GhM_D02G0957.1,GhM_Scaf003G064.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2664:GhM_D11G3725.1,GhM_D11G3728.1 | AT2G44040||AT3G59890 | dihydrodipicolinate reductase family protein | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0055114|oxidation reduction;GO:0005737|cytoplasm;GO:0019877|diaminopimelate biosynthetic process;GO:0009089|lysine biosynthetic process via diaminopimelate;GO:0008839|dihydrodipicolinate reductase activity | GhM_D09G1521.1,GhM_A07G2240.1,GhM_A11G3810.1,GhM_D07G2167.1 | 6 | 1 | Gossypium | Cotton | |||
| TA275:GhM_D11G3811.1,GhM_D11G3812.1,GhM_D11G3813.1,GhM_D11G3815.1,GhM_D11G3820.1 | AT1G67035||AT5G16140 | unknown protein||peptidyl-tRNA hydrolase family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0006412|translation;GO:0004045|aminoacyl-tRNA hydrolase activity;GO:0005575|cellular_component | GhM_A07G2239.1 | 6 | 1 | Gossypium | Cotton | |||
| TA2844:GhM_D13G2379.1,GhM_D13G2381.1 | AT2G26140 | ftsh4; ftsh4 (FtsH protease 4); ATP-dependent peptidase/ ATPase/ metallopeptidase | GO:0009536|plastid;GO:0005739|mitochondrion;GO:0030163|protein catabolic process;GO:0006508|proteolysis;GO:0016887|ATPase activity;GO:0016020|membrane | GhM_A07G0252.1,GhM_A13G2483.1,GhM_D07G0251.1,GhM_D11G0833.1 | 6 | 1 | Gossypium | Cotton | |||
| TA311:GhM_A09G2742.1,GhM_A09G2743.1,GhM_A09G2744.1,GhM_A09G2745.1,GhM_A09G2746.1 | AT1G55850||AT4G23990||AT4G24000 | ATCSLG2, CSLG2; ATCSLG2; cellulose synthase/ transferase/ transferase, transferring glycosyl groups||ATCSLE1, CSLE1; ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups||ATCSLG3, CSLG3; ATCSLG3; cellulose synthase/ transferase/ transferase, transferring glycosyl groups | GO:0016759|cellulose synthase activity;GO:0016740|transferase activity;GO:0030244|cellulose biosynthetic process;GO:0000271|polysaccharide biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_D09G2617.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3198:GhM_A05G3212.1,GhM_A05G3219.1 | AT4G14455||AT4G14465 | DNA-binding protein-related||ATBET12, BET12, ATBS14B, BS14B; ATBET12; SNAP receptor/ protein transporter | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005575|cellular_component;GO:0008565|protein transporter activity;GO:0005484|SNAP receptor activity | GhM_A01G2053.1,GhM_A04G0851.1,GhM_A12G0845.1,GhM_A09G2750.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3445:GhM_A08G0839.1,GhM_A08G0842.1 | AT4G02780 | GA1, ABC33, ATCPS1; GA1 (GA REQUIRING 1); ent-copalyl diphosphate synthase/ magnesium ion binding | GO:0009686|gibberellin biosynthetic process;GO:0000287|magnesium ion binding;GO:0009507|chloroplast;GO:0009905|ent-copalyl diphosphate synthase activity;GO:0009740|gibberellic acid mediated signaling pathway | GhM_D08G0797.1,GhM_D11G1437.1,GhM_A11G1445.1,GhM_D08G0798.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3465:GhM_A08G1860.1,GhM_A08G1861.1 | AT5G61500 | ATATG3, ATG3; ATG3 | GO:0006914|autophagy;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G1824.1,GhM_D08G1810.1,GhM_D07G1784.1,GhM_D08G1734.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3522:GhM_A09G0616.1,GhM_A09G0618.1 | AT3G48660||AT5G63500 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0031225|anchored to membrane;GO:0003674|molecular_function | GhM_A03G1538.1,GhM_A05G4012.1,GhM_D09G0470.1,GhM_D04G0901.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3545:GhM_A09G1221.1,GhM_A09G1223.1 | AT3G44820 | protein binding / signal transducer | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0004871|signal transducer activity | GhM_A07G1284.1,GhM_D07G1262.1,GhM_D09G1154.1,GhM_D09G1153.1 | 6 | 1 | Gossypium | Cotton | |||
| TA3550:GhM_A09G1382.1,GhM_A09G1392.1 | AT2G27020 | PAG1; PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0048046|apoplast;GO:0005886|plasma membrane;GO:0005839|proteasome core complex;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A05G0794.1,GhM_D09G1300.1,GhM_D09G1315.1,GhM_D05G0819.1 | 6 | 1 | Gossypium | Cotton | |||
| TA376:GhM_D03G1963.1,GhM_D03G1967.1,GhM_D03G1969.1,GhM_D03G1971.1 | AT2G39810||AT4G16790 | hydroxyproline-rich glycoprotein family protein||HOS1; HOS1; ubiquitin-protein ligase | ;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0016481|negative regulation of transcription;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0009409|response to cold | GhM_A03G0139.1,GhM_A03G0134.1 | 6 | 1 | Gossypium | Cotton | |||
| TA460:GhM_D13G0087.1,GhM_D13G0089.1,GhM_D13G0090.1,GhM_D13G0091.1 | AT3G48400||AT5G45730||AT5G26190||AT3G26550 | DC1 domain-containing protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A13G0072.1,GhM_A13G0073.1 | 6 | 1 | Gossypium | Cotton | |||
| TA464:GhM_D13G0745.1,GhM_D13G0746.1,GhM_D13G0747.1,GhM_D13G0748.1 | AT3G02540||AT1G79650 | RAD23-3; RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3); damaged DNA binding||RAD23; RAD23; damaged DNA binding | GO:0043130|ubiquitin binding;GO:0006284|base-excision repair;GO:0006289|nucleotide-excision repair;GO:0005634|nucleus;GO:0043161|proteasomal ubiquitin-dependent protein catabolic process;GO:0003684|damaged DNA binding;GO:0006464|protein modification process | GhM_A13G0616.1,GhM_A06G1870.1 | 6 | 1 | Gossypium | Cotton | |||
| TA554:GhM_A10G2375.1,GhM_A10G2379.1,GhM_A10G2383.1 | AT2G38730 | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | GO:0005886|plasma membrane;GO:0006457|protein folding;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0005773|vacuole | GhM_A05G4792.1,GhM_D10G2309.1,GhM_D04G0194.1 | 6 | 1 | Gossypium | Cotton | |||
| TA669:GhM_D02G0274.1,GhM_D02G0280.1,GhM_D02G0282.1 | AT2G32760 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0255.1,GhM_A12G1208.1,GhM_D09G2377.1 | 6 | 1 | Gossypium | Cotton | |||
| TA695:GhM_D04G0338.1,GhM_D04G0340.1,GhM_D04G0342.1 | AT2G23755 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G2082.1,GhM_A05G4609.1,GhM_D03G0180.1 | 6 | 1 | Gossypium | Cotton | |||
| TA735:GhM_D05G3070.1,GhM_D05G3073.1,GhM_D05G3074.1 | AT1G22540 | proton-dependent oligopeptide transport (POT) family protein | GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A02G1111.1,GhM_A05G3076.1,GhM_D02G1144.1 | 6 | 1 | Gossypium | Cotton | |||
| TA772:GhM_D06G2267.1,GhM_D06G2268.1,GhM_D06G2271.1 | AT2G25240||AT3G45220||AT1G47710 | serpin, putative / serine protease inhibitor, putative||serine-type endopeptidase inhibitor | GO:0008150|biological_process;GO:0004869|cysteine-type endopeptidase inhibitor activity;GO:0048046|apoplast;GO:0004867|serine-type endopeptidase inhibitor activity;GO:0005575|cellular_component | GhM_A11G0697.1,GhM_A11G0696.1,GhM_D11G0705.1 | 6 | 1 | Gossypium | Cotton | |||
| TA795:GhM_A01G2529.1,GhM_A01G2531.1,GhM_A01G2532.1 | AT4G33270||AT4G33260||AT1G17050 | SPS2; SPS2 (Solanesyl diphosphate synthase 2); trans-octaprenyltranstransferase||CDC20.2; CDC20.2; signal transducer||CDC20.1; CDC20.1; signal transducer | GO:0007165|signal transduction;GO:0009507|chloroplast;GO:0005834|heterotrimeric G-protein complex;GO:0004871|signal transducer activity | GhM_A06G2379.1,GhM_A03G0201.1,GhM_A03G0200.1 | 6 | 1 | Gossypium | Cotton | |||
| TA840:GhM_D09G1530.1,GhM_D09G1532.1,GhM_D09G1534.1 | AT5G06670||AT3G12020 | kinesin motor protein-related||ATP binding / microtubule motor | GO:0007018|microtubule-based movement;GO:0009507|chloroplast;GO:0003777|microtubule motor activity;GO:0005875|microtubule associated complex;GO:0005524|ATP binding | GhM_A04G0691.1,GhM_A09G1633.1,GhM_D09G1531.1 | 6 | 1 | Gossypium | Cotton | |||
| TA854:GhM_D10G0584.1,GhM_D10G0585.1,GhM_D10G0588.1 | AT5G03990 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G0617.1,GhM_A11G1908.1,GhM_D11G1898.1 | 6 | 1 | Gossypium | Cotton | |||
| TA875:GhM_D10G2806.1,GhM_D10G2808.1,GhM_D10G2809.1 | AT5G05970 | NEDD1; NEDD1 (NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1); nucleotide binding | GO:0009555|pollen development;GO:0000166|nucleotide binding;GO:0000919|cell plate assembly;GO:0060236|regulation of mitotic spindle organization;GO:0009553|embryo sac development;GO:0032467|positive regulation of cytokinesis;GO:0005828|kinetochore microtubule | GhM_A05G3456.1,GhM_A10G2842.1,GhM_D05G3424.1 | 6 | 1 | Gossypium | Cotton | |||
| TA962:GhM_A02G1920.1,GhM_A02G1927.1,GhM_A02G1928.1 | AT2G22780 | PMDH1; PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1); L-malate dehydrogenase/ binding / catalytic/ malate dehydrogenase/ oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005488|binding;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0030060|L-malate dehydrogenase activity;GO:0031998|regulation of fatty acid beta-oxidation;GO:0016615|malate dehydrogenase activity;GO:0016491|oxidoreductase activity | GhM_A01G2237.1,GhM_D03G0342.1,GhM_D01G2192.1 | 6 | 1 | Gossypium | Cotton | |||
| TA1001:GhM_A04G1256.1,GhM_A04G1257.1,GhM_A04G1259.1;TA1836:GhM_D04G1739.1,GhM_D04G1741.1 | AT1G10370||AT1G59700||AT1G10360 | GST30, ATGSTU17, GST30B, ERD9; ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase||ATGSTU16; ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16); glutathione transferase||ATGSTU18, GST29; ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase | GO:0009407|toxin catabolic process;GO:0009507|chloroplast;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm | GhM_D11G2630.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1007:GhM_A04G1518.1,GhM_A04G1519.1,GhM_A04G1520.1;TA1845:GhM_D04G2004.1,GhM_D04G2005.1 | AT5G42500||AT3G13650||AT5G49030 | disease resistance-responsive family protein||OVA2; OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/ catalytic/ isoleucine-tRNA ligase/ nucleotide binding||disease resistance response | GO:0012505|endomembrane system;GO:0004812|aminoacyl-tRNA ligase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0004822|isoleucine-tRNA ligase activity;GO:0006952|defense response;GO:0009807|lignan biosynthetic process;GO:0006418|tRNA aminoacylation for protein translation;GO:0005524|ATP binding;GO:0048481|ovule development | GhM_D04G1178.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1018:GhM_A05G1024.1,GhM_A05G1025.1,GhM_A05G1026.1;TA2503:GhM_D10G2302.1,GhM_D10G2306.1 | AT5G59260||AT3G53810||AT5G60280||AT3G45410 | lectin protein kinase, putative||lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G2679.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1050:GhM_A05G4765.1,GhM_A05G4766.1,GhM_A05G4767.1;TA1798:GhM_D04G0174.1,GhM_D04G0175.1 | AT3G56230||AT1G01640||AT1G05575 | unknown protein||speckle-type POZ protein-related | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0009908|flower development;GO:0005575|cellular_component;GO:0009061|anaerobic respiration | GhM_D04G0176.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1111:GhM_A09G1439.1,GhM_A09G1440.1,GhM_A09G1441.1;TA2403:GhM_D09G1349.1,GhM_D09G1350.1 | AT5G12440||AT3G51950 | nucleic acid binding / nucleotide binding / zinc ion binding||zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_D07G1459.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1126:GhM_A10G0113.1,GhM_A10G0114.1;TA2442:GhM_D10G0098.1,GhM_D10G0099.1 | AT4G05530 | IBR1, SDRA; IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1); binding / catalytic/ oxidoreductase | GO:0005488|binding;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0016491|oxidoreductase activity | GhM_A05G1953.1,GhM_D05G1963.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1130:GhM_A10G0237.1,GhM_A10G0241.1;TA2446:GhM_D10G0222.1,GhM_D10G0226.1 | AT4G05090||AT5G54390 | AHL, ATAHL; AHL (ARABIDOPSIS HAL2-LIKE); 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase||inositol monophosphatase family protein | GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0009507|chloroplast;GO:0006790|sulfur metabolic process;GO:0008441|3'(2'),5'-bisphosphate nucleotidase activity;GO:0005575|cellular_component | GhM_A05G1874.1,GhM_D05G1884.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1140:GhM_A10G0478.1,GhM_A10G0480.1;TA2452:GhM_D10G0459.1,GhM_D10G0461.1 | AT5G46150 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A06G2517.1,GhM_D06G2512.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1142:GhM_A10G0496.1,GhM_A10G0498.1;TA2454:GhM_D10G0476.1,GhM_D10G0477.1 | AT1G30370 | lipase class 3 family protein | GO:0004806|triglyceride lipase activity;GO:0006629|lipid metabolic process | GhM_A05G1630.1,GhM_D05G1645.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1146:GhM_A10G0602.1,GhM_A10G0603.1;TA2456:GhM_D10G0577.1,GhM_D10G0578.1 | AT5G07990 | TT7, CYP75B1, D501; TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | GO:0019825|oxygen binding;GO:0009813|flavonoid biosynthetic process;GO:0009411|response to UV;GO:0016711|flavonoid 3'-monooxygenase activity | GhM_A11G1582.1,GhM_D11G1577.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1147:GhM_A10G0627.1,GhM_A10G0629.1;TA2457:GhM_D10G0599.1,GhM_D10G0600.1 | AT3G14130||AT5G66840 | SAP domain-containing protein||(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | GO:0009055|electron carrier activity;GO:0008152|metabolic process;GO:0010181|FMN binding;GO:0003824|catalytic activity;GO:0005634|nucleus;GO:0008891|glycolate oxidase activity;GO:0003676|nucleic acid binding;GO:0003677|DNA binding;GO:0016491|oxidoreductase activity | GhM_A06G1881.1,GhM_A10G0628.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1150:GhM_A10G0710.1,GhM_A10G0712.1;TA2460:GhM_D10G0690.1,GhM_D10G0691.1 | AT3G16370 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0048046|apoplast | GhM_A05G1475.1,GhM_D05G1489.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1153:GhM_A10G0853.1,GhM_A10G0854.1;TA2465:GhM_D10G0787.1,GhM_D10G0788.1 | AT5G20030||AT4G32440 | agenet domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0005575|cellular_component | GhM_A06G1373.1,GhM_D06G1481.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1162:GhM_A10G1220.1,GhM_A10G1221.1;TA2491:GhM_D10G1905.1,GhM_D10G1906.1 | AT3G21550 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A09G2834.1,GhM_D09G2709.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1173:GhM_A10G1633.1,GhM_A10G1644.1;TA1175:GhM_A10G1635.1,GhM_A10G1643.1 | - | - | - | GhM_A10G1627.1,GhM_A10G1625.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1180:GhM_A10G1770.1,GhM_A10G1771.1;TA2475:GhM_D10G1363.1,GhM_D10G1364.1 | - | - | - | GhM_A02G1030.1,GhM_D02G1243.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1205:GhM_A10G2556.1,GhM_A10G2557.1;TA2511:GhM_D10G2473.1,GhM_D10G2474.1 | AT2G28120||AT2G39210 | nodulin family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0006499|N-terminal protein myristoylation;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A05G3326.1,GhM_D05G3305.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1209:GhM_A10G2660.1,GhM_A10G2661.1;TA2516:GhM_D10G2575.1,GhM_D10G2576.1 | AT2G39420 | esterase/lipase/thioesterase family protein | GO:0003824|catalytic activity | GhM_A06G2195.1,GhM_D06G2175.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1213:GhM_A10G2722.1,GhM_A10G2723.1;TA2520:GhM_D10G2661.1,GhM_D10G2662.1 | AT2G37430||AT2G28710 | zinc finger (C2H2 type) family protein||zinc finger (C2H2 type) family protein (ZAT11) | GO:0045449|regulation of transcription;GO:0010200|response to chitin;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A13G0246.1,GhM_D13G0231.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1220:GhM_A10G2928.1,GhM_A10G2929.1;TA2530:GhM_D10G2887.1,GhM_D10G2888.1 | AT2G39980 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_A05G3880.1,GhM_D04G0795.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1238:GhM_A11G0819.1,GhM_A11G0825.1;TA2565:GhM_D11G0838.1,GhM_D11G0844.1 | AT3G29200||AT1G69370 | CM3, cm-3; CM3 (chorismate mutase 3); chorismate mutase||CM1, ATCM1; CM1 (CHORISMATE MUTASE 1); L-ascorbate peroxidase/ chorismate mutase | GO:0009536|plastid;GO:0016688|L-ascorbate peroxidase activity;GO:0009073|aromatic amino acid family biosynthetic process;GO:0005829|cytosol;GO:0009607|response to biotic stimulus;GO:0000162|tryptophan biosynthetic process;GO:0004106|chorismate mutase activity | GhM_A13G1020.1,GhM_D13G0901.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1247:GhM_A11G1095.1,GhM_A11G1096.1;TA2575:GhM_D11G1108.1,GhM_D11G1109.1 | AT2G46310 | CRF5; CRF5 (CYTOKININ RESPONSE FACTOR 5); DNA binding / transcription factor | GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0048825|cotyledon development;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0048366|leaf development;GO:0042991|transcription factor import into nucleus | GhM_A07G1706.1,GhM_D07G1674.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1266:GhM_A11G1901.1,GhM_A11G1902.1;TA2593:GhM_D11G1891.1,GhM_D11G1892.1 | AT5G38430 | ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016984|ribulose-bisphosphate carboxylase activity;GO:0009573|chloroplast ribulose bisphosphate carboxylase complex;GO:0010114|response to red light;GO:0010218|response to far red light;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009637|response to blue light;GO:0016020|membrane;GO:0015977|carbon fixation | GhM_A07G2244.1,GhM_D07G2164.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1278:GhM_A11G2495.1,GhM_A11G2496.1;TA2610:GhM_D11G2391.1,GhM_D11G2392.1 | AT4G37850 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A12G1081.1,GhM_D12G0967.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1281:GhM_A11G2616.1,GhM_A11G2618.1;TA2609:GhM_D11G2288.1,GhM_D11G2289.1 | AT5G24010||AT4G39110 | protein kinase family protein | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A11G2617.1,GhM_A11G2613.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1291:GhM_A11G2851.1,GhM_A11G2852.1;TA2617:GhM_D11G2803.1,GhM_D11G2805.1 | AT1G58030||AT3G03720 | CAT2; CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid transmembrane transporter||CAT4; CAT4 (CATIONIC AMINO ACID TRANSPORTER 4); cationic amino acid transmembrane transporter | GO:0006810|transport;GO:0015326|cationic amino acid transmembrane transporter activity;GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A13G2174.1,GhM_D13G2056.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1318:GhM_A11G3477.1,GhM_A11G3478.1;TA2642:GhM_D11G3390.1,GhM_D11G3391.1 | AT4G26670 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008565|protein transporter activity | GhM_A01G0926.1,GhM_D01G0884.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1325:GhM_A11G3664.1,GhM_A11G3665.1;TA2655:GhM_D11G3582.1,GhM_D11G3583.1 | AT3G14850||AT2G30900 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_A13G2022.1,GhM_D13G1919.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1326:GhM_A11G3667.1,GhM_A11G3668.1;TA2656:GhM_D11G3585.1,GhM_D11G3586.1 | AT3G46710||AT3G14470 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005575|cellular_component | GhM_D11G3588.1,GhM_D11G3587.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1360:GhM_A12G0437.1,GhM_A12G0445.1;TA2687:GhM_D12G0350.1,GhM_D12G0358.1 | AT5G45600 | GAS41, TAF14B; GAS41; protein binding | GO:0005634|nucleus;GO:0005515|protein binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A11G0515.1,GhM_D11G0498.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1369:GhM_A12G0722.1,GhM_A12G0724.1;TA2696:GhM_D12G0710.1,GhM_D12G0713.1 | AT1G19640||AT4G36470 | JMT; JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE); jasmonate O-methyltransferase||S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0009695|jasmonic acid biosynthetic process;GO:0008150|biological_process;GO:0009694|jasmonic acid metabolic process;GO:0030795|jasmonate O-methyltransferase activity;GO:0009611|response to wounding;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0005737|cytoplasm;GO:0009867|jasmonic acid mediated signaling pathway;GO:0005575|cellular_component | GhM_A10G1103.1,GhM_D10G0992.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1381:GhM_A12G1115.1,GhM_A12G1118.1;TA2703:GhM_D12G1113.1,GhM_D12G1116.1 | AT5G04660 | CYP77A4; CYP77A4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A10G2509.1,GhM_D10G2425.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1386:GhM_A12G1248.1,GhM_A12G1249.1;TA2705:GhM_D12G1178.1,GhM_D12G1180.1 | AT4G39830 | L-ascorbate oxidase, putative | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0008447|L-ascorbate oxidase activity;GO:0055114|oxidation reduction;GO:0005576|extracellular region;GO:0016491|oxidoreductase activity | GhM_A02G1743.1,GhM_D03G0467.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1387:GhM_A12G1275.1,GhM_A12G1276.1;TA2706:GhM_D12G1207.1,GhM_D12G1208.1 | AT3G60580||AT1G02040 | zinc finger (C2H2 type) family protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_D07G1775.1,GhM_A07G1817.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1388:GhM_A12G1284.1,GhM_A12G1286.1;TA2707:GhM_D12G1217.1,GhM_D12G1219.1 | AT5G43270||AT1G02065||AT1G27370 | squamosa promoter-binding protein-like 10 (SPL10)||SPL8; SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding||SPL2; SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor | GO:0016563|transcription activator activity;GO:0010358|leaf shaping;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009556|microsporogenesis;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0009554|megasporogenesis;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A07G1821.1,GhM_D07G1781.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1389:GhM_A12G1299.1,GhM_A12G1300.1;TA2708:GhM_D12G1235.1,GhM_D12G1237.1 | AT2G44810 | DAD1; DAD1 (DEFECTIVE ANTHER DEHISCENCE 1); phospholipase A1/ triacylglycerol lipase | GO:0009695|jasmonic acid biosynthetic process;GO:0008970|phospholipase A1 activity;GO:0009507|chloroplast;GO:0004806|triglyceride lipase activity;GO:0009611|response to wounding;GO:0010152|pollen maturation;GO:0005737|cytoplasm;GO:0006629|lipid metabolic process;GO:0009901|anther dehiscence;GO:0047714|galactolipase activity | GhM_A08G0740.1,GhM_D08G0705.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1391:GhM_A12G1349.1,GhM_A12G1350.1;TA2710:GhM_D12G1287.1,GhM_D12G1288.1 | AT2G45300 | 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase | GO:0009507|chloroplast;GO:0018920|glyphosate metabolic process;GO:0009073|aromatic amino acid family biosynthetic process;GO:0003866|3-phosphoshikimate 1-carboxyvinyltransferase activity;GO:0009423|chorismate biosynthetic process | GhM_A07G1799.1,GhM_D07G1761.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1394:GhM_A12G1385.1,GhM_A12G1387.1;TA2713:GhM_D12G1329.1,GhM_D12G1330.1 | AT2G45760||AT1G09070||AT3G61190 | SRC2, (AT)SRC2; SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding||BAP1; BAP1 (BON ASSOCIATION PROTEIN 1); phospholipid binding / protein binding||BAP2, BAL; BAP2 (BON ASSOCIATION PROTEIN 2) | GO:0008150|biological_process;GO:0005515|protein binding;GO:0019725|cellular homeostasis;GO:0003674|molecular_function;GO:0009751|response to salicylic acid stimulus;GO:0006623|protein targeting to vacuole;GO:0009611|response to wounding;GO:0009266|response to temperature stimulus;GO:0009408|response to heat;GO:0000326|protein storage vacuole;GO:0031348|negative regulation of defense response;GO:0016020|membrane;GO:0005543|phospholipid binding;GO:0005575|cellular_component;GO:0005783|endoplasmic reticulum;GO:0009409|response to cold | GhM_A11G0996.1,GhM_D11G1009.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1407:GhM_A12G1989.1,GhM_A12G1990.1;TA2731:GhM_D12G1900.1,GhM_D12G1901.1 | AT2G02080||AT2G02070 | AtIDD5; AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5); nucleic acid binding / transcription factor/ zinc ion binding||AtIDD4; AtIDD4 (Arabidopsis thaliana Indeterminate(ID)-Domain 4); transcription factor | GO:0009507|chloroplast;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A03G1579.1,GhM_D02G1646.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1410:GhM_A12G2121.1,GhM_A12G2122.1;TA2735:GhM_D12G2027.1,GhM_D12G2028.1 | AT1G26820||AT2G02990||AT1G14220 | RNS3; RNS3 (RIBONUCLEASE 3); RNA binding / endoribonuclease/ ribonuclease T2||ribonuclease T2 family protein||RNS1, ATRNS1; RNS1 (RIBONUCLEASE 1); endoribonuclease/ ribonuclease | GO:0012505|endomembrane system;GO:0003723|RNA binding;GO:0004521|endoribonuclease activity;GO:0004540|ribonuclease activity;GO:0009718|anthocyanin biosynthetic process;GO:0009611|response to wounding;GO:0006499|N-terminal protein myristoylation;GO:0007568|aging;GO:0005576|extracellular region;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016036|cellular response to phosphate starvation;GO:0033897|ribonuclease T2 activity | GhM_A13G0902.1,GhM_D13G0847.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1412:GhM_A12G2163.1,GhM_A12G2164.1;TA2737:GhM_D12G2066.1,GhM_D12G2067.1 | AT3G18440||AT1G25480 | unknown protein||AtALMT9; AtALMT9 (aluminum-activated malate transporter 9); anion channel | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0015743|malate transport;GO:0005253|anion channel activity;GO:0009705|plant-type vacuole membrane;GO:0005575|cellular_component | GhM_A12G1997.1,GhM_D12G1908.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1439:GhM_A12G3027.1,GhM_A12G3031.1;TA2752:GhM_D12G2914.1,GhM_D12G2916.1 | AT5G54160 | ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0005829|cytosol;GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0005886|plasma membrane;GO:0047763|caffeate O-methyltransferase activity | GhM_A08G1511.1,GhM_D08G1340.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1442:GhM_A12G3120.1,GhM_A12G3121.1;TA2757:GhM_D12G3005.1,GhM_D12G3006.1 | AT3G16520 | UGT88A1; UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | GhM_A09G2223.1,GhM_D09G2130.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1445:GhM_A12G3215.1,GhM_A12G3217.1;TA2760:GhM_D12G3103.1,GhM_D12G3104.1 | AT5G51790||AT1G12540||AT5G51780 | basix helix-loop-helix (bHLH) family protein||basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A12G0936.1,GhM_D08G2336.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1473:GhM_A13G0656.1,GhM_A13G0659.1;TA2787:GhM_D13G0711.1,GhM_D13G0712.1 | AT3G12820||AT2G31180||AT5G16770 | AtMYB9; AtMYB9 (myb domain protein 9); DNA binding / transcription factor||AtMYB10; AtMYB10 (myb domain protein 10); DNA binding / transcription factor||ATMYB14, MYB14AT, MYB14; MYB14 (MYB DOMAIN PROTEIN 14); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0009733|response to auxin stimulus;GO:0006499|N-terminal protein myristoylation;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | GhM_A13G0675.1,GhM_D13G0695.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1490:GhM_A13G1250.1,GhM_A13G1251.1;TA2801:GhM_D13G1021.1,GhM_D13G1022.1 | AT1G05200||AT2G32400 | ATGLR3.4, GLR3.4, GLUR3; ATGLR3.4; intracellular ligand-gated ion channel||GLR5, GLR3.7, ATGLR3.7; GLR5 (GLUTAMATE RECEPTOR 5); intracellular ligand-gated ion channel | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009416|response to light stimulus;GO:0006874|cellular calcium ion homeostasis;GO:0005217|intracellular ligand-gated ion channel activity;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A12G2032.1,GhM_D12G1940.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1511:GhM_A13G2010.1,GhM_A13G2011.1;TA2823:GhM_D13G1906.1,GhM_D13G1907.1 | AT3G14920 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0009505|plant-type cell wall;GO:0005773|vacuole | GhM_A01G0574.1,GhM_D01G0542.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1531:GhM_A13G2367.1,GhM_A13G2369.1;TA2841:GhM_D13G2268.1,GhM_D13G2270.1 | AT4G10710 | SPT16; SPT16 (global transcription factor C) | GO:0005719|nuclear euchromatin;GO:0035101|FACT complex;GO:0005634|nucleus;GO:0009987|cellular process;GO:0005730|nucleolus | GhM_A11G3447.1,GhM_D11G3360.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1538:GhM_A13G2719.1,GhM_A13G2720.1;TA2855:GhM_D13G2609.1,GhM_D13G2610.1 | AT4G30010 | unknown protein | GO:0008150|biological_process;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A08G0253.1,GhM_D08G0245.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1548:GhM_D01G0065.1,GhM_D01G0066.1;TA2094:GhM_A01G0082.1,GhM_A01G0083.1 | AT3G19000 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008150|biological_process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A01G0055.1,GhM_D01G0036.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1558:GhM_D01G0314.1,GhM_D01G0316.1;TA2105:GhM_A01G0330.1,GhM_A01G0332.1 | AT1G48110 | ECT7; ECT7 (evolutionarily conserved C-terminal region 7) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0653.1,GhM_D02G0646.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1572:GhM_D01G0554.1,GhM_D01G0555.1;TA2120:GhM_A01G0589.1,GhM_A01G0590.1 | AT1G53280 | DJ-1 family protein | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_D05G3956.1,GhM_A04G0418.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1577:GhM_D01G0739.1,GhM_D01G0740.1;TA2126:GhM_A01G0778.1,GhM_A01G0779.1 | AT1G65290 | mtACP2; mtACP2 (mitochondrial acyl carrier protein 2); acyl carrier/ metal ion binding | GO:0005759|mitochondrial matrix;GO:0006633|fatty acid biosynthetic process;GO:0005739|mitochondrion;GO:0046872|metal ion binding;GO:0050897|cobalt ion binding;GO:0000036|acyl carrier activity | GhM_D13G1205.1,GhM_A13G1033.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1583:GhM_D01G0781.1,GhM_D01G0782.1;TA2132:GhM_A01G0818.1,GhM_A01G0819.1 | AT3G15160 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A04G0196.1,GhM_D05G4184.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1615:GhM_D01G2260.1,GhM_D01G2262.1;TA2183:GhM_A01G2303.1,GhM_A01G2306.1 | AT4G24290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin/complement C9 (InterPro:IPR001862); BEST Arabidopsis thaliana protein match is: NSL1 (necrotic spotted lesions 1) (TAIR:AT1G28380.1); Has 124 Blast hits to 124 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 41; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_D12G0483.1,GhM_A12G0486.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1620:GhM_D01G2546.1,GhM_D01G2547.1;TA2189:GhM_A01G2618.1,GhM_A01G2619.1 | AT5G03795 | LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G07620.1); Has 866 Blast hits to 860 proteins in 87 species: Archae - 0; Bacteria - 9; Metazoa - 265; Fungi - 4; Plants - 504; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). | GO:0016020|membrane | GhM_A09G1798.1,GhM_D09G1689.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1626:GhM_D01G2685.1,GhM_D01G2686.1;TA2195:GhM_A01G2759.1,GhM_A01G2760.1 | AT2G37570 | SLT1; SLT1 (sodium- and lithium-tolerant 1) | GO:0042538|hyperosmotic salinity response;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D04G1528.1,GhM_A04G1066.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1640:GhM_D02G0139.1,GhM_D02G0141.1;TA2873:GhM_A02G0134.1,GhM_A02G0136.1 | AT3G48560 | CSR1, ALS, AHAS, TZP5, IMR1; CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1); acetolactate synthase/ pyruvate decarboxylase | GO:0009507|chloroplast;GO:0004737|pyruvate decarboxylase activity;GO:0003984|acetolactate synthase activity;GO:0009082|branched chain family amino acid biosynthetic process | GhM_A10G1725.1,GhM_D10G1400.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1672:GhM_D02G0834.1,GhM_D02G0836.1;TA2900:GhM_A02G0843.1,GhM_A02G0845.1 | AT1G77330 | 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D03G0753.1,GhM_A02G1390.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1689:GhM_D02G1342.1,GhM_D02G1344.1;TA3004:GhM_A03G1352.1,GhM_A03G1353.1 | AT1G68570 | proton-dependent oligopeptide transport (POT) family protein | GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_D13G0749.1,GhM_A13G0614.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1700:GhM_D02G2213.1,GhM_D02G2214.1;TA3022:GhM_A03G2191.1,GhM_A03G2192.1 | AT4G15240||AT1G05280 | fringe-related protein | GO:0008150|biological_process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005794|Golgi apparatus;GO:0005575|cellular_component | GhM_D12G1696.1,GhM_A12G1746.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1703:GhM_D02G2483.1,GhM_D02G2484.1;TA3026:GhM_A03G2460.1,GhM_A03G2461.1 | AT3G19320||AT4G06744||AT1G49750 | leucine-rich repeat family protein||leucine-rich repeat family protein / extensin family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0009507|chloroplast | GhM_D04G2043.1,GhM_A04G1566.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1719:GhM_D03G0031.1,GhM_D03G0032.1;TA2950:GhM_A02G2238.1,GhM_A02G2239.1 | AT3G51430 | YLS2; YLS2; strictosidine synthase | GO:0016844|strictosidine synthase activity;GO:0009821|alkaloid biosynthetic process;GO:0010150|leaf senescence;GO:0005783|endoplasmic reticulum | GhM_D12G0658.1,GhM_A12G0658.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1740:GhM_D03G0505.1,GhM_D03G0506.1;TA2929:GhM_A02G1781.1,GhM_A02G1782.1 | AT4G09830 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64780.1); Has 56 Blast hits to 56 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D11G2606.1,GhM_D06G2266.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1750:GhM_D03G0939.1,GhM_D03G0940.1;TA2908:GhM_A02G1303.1,GhM_A02G1304.1 | AT1G64065 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44000.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A12G2879.1,GhM_D12G2769.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1751:GhM_D03G0956.1,GhM_D03G0957.1;TA2907:GhM_A02G1284.1,GhM_A02G1285.1 | AT4G23690||AT1G64160 | disease resistance-responsive family protein / dirigent family protein | GO:0012505|endomembrane system;GO:0006952|defense response;GO:0009807|lignan biosynthetic process;GO:0003674|molecular_function | GhM_D08G1487.1,GhM_A08G1339.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1776:GhM_D03G1620.1,GhM_D03G1621.1;TA2971:GhM_A03G0509.1,GhM_A03G0510.1 | - | - | - | GhM_A03G0618.1,GhM_D03G1500.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1777:GhM_D03G1655.1,GhM_D03G1657.1;TA2970:GhM_A03G0472.1,GhM_A03G0474.1 | AT2G28380 | DRB2; DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding | GO:0003725|double-stranded RNA binding;GO:0008150|biological_process;GO:0005737|cytoplasm | GhM_A08G2567.1,GhM_D08G2502.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1783:GhM_D03G1861.1,GhM_D03G1862.1;TA2963:GhM_A03G0257.1,GhM_A03G0258.1 | AT1G12740 | CYP87A2; CYP87A2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D12G2696.1,GhM_A12G2808.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1784:GhM_D03G1865.1,GhM_D03G1866.1;TA2961:GhM_A03G0248.1,GhM_A03G0249.1 | AT5G52020||AT5G51990||AT1G12630 | DNA binding / transcription activator/ transcription factor||AP2 domain-containing protein||CBF4, DREB1D; CBF4 (C- REPEAT-BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0050832|defense response to fungus | GhM_D08G2280.1,GhM_A08G2337.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1812:GhM_D04G0693.1,GhM_D04G0694.1;TA3226:GhM_A05G4242.1,GhM_A05G4243.1 | AT3G01680 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G2019.1,GhM_D10G0921.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1818:GhM_D04G0944.1,GhM_D04G0945.1;TA2033:GhM_D06G1006.1,GhM_D06G1007.1 | AT1G69540||AT1G18750 | AGL94; AGL94 (AGAMOUS-LIKE 94); DNA binding / transcription factor||AGL65; AGL65 (AGAMOUS-LIKE 65); DNA binding / transcription factor | GO:0009555|pollen development;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A05G4054.1,GhM_A06G1012.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1826:GhM_D04G1300.1,GhM_D04G1305.1;TA3072:GhM_A04G0847.1,GhM_A04G0856.1 | AT4G25490||AT2G36450 | CBF1, DREB1B, ATCBF1; CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor||HRD; HRD (HARDY); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0050832|defense response to fungus;GO:0009631|cold acclimation;GO:0009409|response to cold | GhM_D01G1596.1,GhM_A10G2338.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1831:GhM_D04G1601.1,GhM_D04G1604.1;TA3081:GhM_A04G1136.1,GhM_A04G1138.1 | AT3G09220 | LAC7; LAC7 (laccase 7); laccase | GO:0012505|endomembrane system;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0046274|lignin catabolic process | GhM_A13G1161.1,GhM_D13G1101.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1833:GhM_D04G1641.1,GhM_D04G1643.1;TA3082:GhM_A04G1168.1,GhM_A04G1170.1 | AT5G01250 | alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein | GO:0008150|biological_process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005795|Golgi stack;GO:0016740|transferase activity | GhM_D09G1931.1,GhM_A09G2029.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1872:GhM_D05G0202.1,GhM_D05G0203.1;TA3117:GhM_A05G0193.1,GhM_A05G0194.1 | AT5G25940 | early nodulin-related | GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A06G0677.1,GhM_D06G0681.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1879:GhM_D05G0439.1,GhM_D05G0440.1;TA3125:GhM_A05G0419.1,GhM_A05G0420.1 | AT5G14750||AT3G13540 | ATMYB5; ATMYB5 (MYB DOMAIN PROTEIN 5); DNA binding / transcription factor||WER, ATMYB66, WER1; ATMYB66 (MYB DOMAIN PROTEIN 66); DNA binding / protein binding / transcription factor/ transcription regulator | GO:0009845|seed germination;GO:0005515|protein binding;GO:0030528|transcription regulator activity;GO:0010468|regulation of gene expression;GO:0048354|mucilage biosynthetic process during seed coat development;GO:0005634|nucleus;GO:0010090|trichome morphogenesis;GO:0045165|cell fate commitment;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010214|seed coat development;GO:0010026|trichome differentiation | GhM_D06G1015.1,GhM_A05G4825.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1892:GhM_D05G0841.1,GhM_D05G0842.1;TA3136:GhM_A05G0819.1,GhM_A05G0820.1 | AT1G11310||AT3G45290||AT1G61560 | MLO6, ATMLO6; MLO6 (MILDEW RESISTANCE LOCUS O 6); calmodulin binding||MLO2, ATMLO2, PMR2; MLO2 (MILDEW RESISTANCE LOCUS O 2); calmodulin binding||MLO3, ATMLO3; MLO3 (MILDEW RESISTANCE LOCUS O 3); calmodulin binding | GO:0009620|response to fungus;GO:0005516|calmodulin binding;GO:0006952|defense response;GO:0031348|negative regulation of defense response;GO:0008219|cell death;GO:0009817|defense response to fungus, incompatible interaction;GO:0005886|plasma membrane;GO:0016021|integral to membrane | GhM_A07G1413.1,GhM_D07G1392.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1905:GhM_D05G1341.1,GhM_D05G1342.1;TA3149:GhM_A05G1325.1,GhM_A05G1326.1 | AT1G80790||AT4G00380||AT1G15910 | XH/XS domain-containing protein / XS zinc finger domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D10G1169.1,GhM_A12G1130.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1927:GhM_D05G2131.1,GhM_D05G2132.1;TA3167:GhM_A05G2111.1,GhM_A05G2112.1 | AT1G62280 | SLAH1; SLAH1 (SLAC1 HOMOLOGUE 1); transporter | GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0016021|integral to membrane;GO:0006873|cellular ion homeostasis | GhM_A01G1250.1,GhM_D01G1213.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1933:GhM_D05G2410.1,GhM_D05G2411.1;TA3173:GhM_A05G2397.1,GhM_A05G2398.1 | AT1G58370 | RXF12, ATXYN1; RXF12; endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0005975|carbohydrate metabolic process | GhM_D06G0288.1,GhM_A06G0287.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1947:GhM_D05G2839.1,GhM_D05G2841.1;TA3188:GhM_A05G2839.1,GhM_A05G2840.1 | AT1G71450||AT1G33760 | AP2 domain-containing transcription factor, putative | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A02G1116.1,GhM_D02G1151.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1954:GhM_D05G3068.1,GhM_D05G3069.1;TA3194:GhM_A05G3074.1,GhM_A05G3075.1 | AT1G72160||AT4G09160 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | GO:0005886|plasma membrane;GO:0009507|chloroplast;GO:0005215|transporter activity;GO:0006810|transport | GhM_D13G1509.1,GhM_A13G1630.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1964:GhM_D05G3297.1,GhM_D05G3299.1;TA3202:GhM_A05G3313.1,GhM_A05G3316.1 | AT5G04410||AT3G10490 | anac051; anac052 (Arabidopsis NAC domain containing protein 52); transcription factor||NAC2, anac078; NAC2; transcription factor | GO:0009644|response to high light intensity;GO:0016563|transcription activator activity;GO:0009555|pollen development;GO:0007275|multicellular organismal development;GO:0005634|nucleus;GO:0009962|regulation of flavonoid biosynthetic process;GO:0005737|cytoplasm;GO:0045941|positive regulation of transcription;GO:0003700|transcription factor activity;GO:0005730|nucleolus | GhM_D04G0080.1,GhM_D10G2463.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1965:GhM_D05G3312.1,GhM_D05G3318.1;TA3204:GhM_A05G3331.1,GhM_A05G3340.1 | AT3G10400||AT3G10390 | RNA recognition motif (RRM)-containing protein||FLD; FLD (FLOWERING LOCUS D); amine oxidase/ electron carrier/ oxidoreductase | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0016575|histone deacetylation;GO:0009507|chloroplast;GO:0008131|amine oxidase activity;GO:0000166|nucleotide binding;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0003676|nucleic acid binding;GO:0016491|oxidoreductase activity;GO:0009911|positive regulation of flower development;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0009055|electron carrier activity | GhM_D05G3311.1,GhM_A05G3339.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1971:GhM_D05G3633.1,GhM_D05G3634.1;TA3213:GhM_A05G3688.1,GhM_A05G3689.1 | AT3G02600||AT1G15080 | ATPAP2, ATLPP2, LPP2; LPP2 (LIPID PHOSPHATE PHOSPHATASE 2); acid phosphatase/ phosphatidate phosphatase||LPP3, ATLPP3; LPP3 (LIPID PHOSPHATE PHOSPHATASE 3); phosphatidate phosphatase | GO:0006644|phospholipid metabolic process;GO:0005887|integral to plasma membrane;GO:0008195|phosphatidate phosphatase activity;GO:0003993|acid phosphatase activity;GO:0005886|plasma membrane;GO:0009738|abscisic acid mediated signaling pathway | GhM_A07G0891.1,GhM_D07G0894.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2001:GhM_D06G0019.1,GhM_D06G0020.1;TA3256:GhM_A06G0025.1,GhM_A06G0026.1 | AT1G20120||AT1G75900 | family II extracellular lipase 3 (EXL3)||family II extracellular lipase, putative | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0019953|sexual reproduction;GO:0006629|lipid metabolic process;GO:0005576|extracellular region;GO:0008415|acyltransferase activity;GO:0004091|carboxylesterase activity;GO:0016298|lipase activity | GhM_A05G2065.1,GhM_D05G2080.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2056:GhM_D06G1926.1,GhM_D06G1928.1;TA3309:GhM_A06G1946.1,GhM_A06G1947.1 | AT4G21760||AT1G61820 | BGLU47; BGLU47 (Beta-glucosidase 47); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU46; BGLU46 (BETA GLUCOSIDASE 46); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0009809|lignin biosynthetic process | GhM_D10G0151.1,GhM_A10G0164.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2067:GhM_D06G2158.1,GhM_D06G2159.1;TA3319:GhM_A06G2177.1,GhM_A06G2178.1 | AT3G48670 | XH/XS domain-containing protein / XS zinc finger domain-containing protein | GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0006342|chromatin silencing;GO:0006306|DNA methylation;GO:0005575|cellular_component | GhM_A05G4183.1,GhM_D04G0744.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2068:GhM_D06G2199.1,GhM_D06G2200.1;TA3323:GhM_A06G2222.1,GhM_A06G2223.1 | AT5G42300 | UBL5; UBL5 (UBIQUITIN-LIKE PROTEIN 5) | GO:0006464|protein modification process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D08G2513.1,GhM_A08G2575.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2080:GhM_D06G2397.1,GhM_D06G2398.1;TA3332:GhM_A06G2390.1,GhM_A06G2391.1 | AT1G80620||AT1G15810 | ribosomal protein S15 family protein | GO:0015935|small ribosomal subunit;GO:0009507|chloroplast;GO:0005840|ribosome;GO:0005622|intracellular;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A02G1992.1,GhM_D03G0276.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2081:GhM_D06G2405.1,GhM_D06G2407.1;TA3333:GhM_A06G2404.1,GhM_A06G2406.1 | AT5G32440 | LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). | GO:0009507|chloroplast | GhM_A06G1353.1,GhM_D06G1495.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2199:GhM_D07G0037.1,GhM_D07G0038.1;TA3347:GhM_A07G0032.1,GhM_A07G0033.1 | AT1G52780||AT2G03500 | unknown protein||myb family transcription factor | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016020|membrane | GhM_D07G0036.1,GhM_A07G0034.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2204:GhM_D07G0306.1,GhM_D07G0307.1;TA3354:GhM_A07G0306.1,GhM_A07G0307.1 | AT5G11520 | ASP3, YLS4; ASP3 (ASPARTATE AMINOTRANSFERASE 3); L-aspartate:2-oxoglutarate aminotransferase | GO:0005777|peroxisome;GO:0010150|leaf senescence;GO:0006807|nitrogen compound metabolic process;GO:0009536|plastid;GO:0004069|L-aspartate:2-oxoglutarate aminotransferase activity;GO:0016020|membrane | GhM_A06G0759.1,GhM_D06G0759.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2214:GhM_D07G0666.1,GhM_D07G0668.1;TA3363:GhM_A07G0674.1,GhM_A07G0676.1 | AT4G24770 | RBP31, ATRBP31, CP31, ATRBP33; RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding | GO:0009570|chloroplast stroma;GO:0009941|chloroplast envelope;GO:0009579|thylakoid | GhM_A03G1013.1,GhM_D03G1240.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2227:GhM_D07G0950.1,GhM_D07G0951.1;TA3372:GhM_A07G0953.1,GhM_A07G0954.1 | AT2G03500||AT4G37180 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_D11G0503.1,GhM_D05G2922.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2231:GhM_D07G1024.1,GhM_D07G1027.1;TA3374:GhM_A07G1033.1,GhM_A07G1035.1 | AT2G32930 | ZFN2; ZFN2 (ZINC FINGER NUCLEASE 2); DNA binding / nuclease/ nucleic acid binding | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0004518|nuclease activity;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A07G2081.1,GhM_D07G2061.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2251:GhM_D07G1992.1,GhM_D07G1993.1;TA3392:GhM_A07G2054.1,GhM_A07G2055.1 | AT5G03795||AT3G07620 | LOCATED IN: membrane; EXPRESSED IN: embryo, sepal, flower; EXPRESSED DURING: C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: exostosin family protein (TAIR:AT3G07620.1); Has 866 Blast hits to 860 proteins in 87 species: Archae - 0; Bacteria - 9; Metazoa - 265; Fungi - 4; Plants - 504; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).||exostosin family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016020|membrane;GO:0003824|catalytic activity | GhM_A11G1731.1,GhM_D11G1717.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2266:GhM_D07G2332.1,GhM_D07G2333.1;TA3398:GhM_A07G2419.1,GhM_A07G2420.1 | AT2G04570||AT2G42990 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process | GhM_A11G1787.1,GhM_D11G1772.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2267:GhM_D07G2357.1,GhM_D07G2361.1;TA3400:GhM_A07G2456.1,GhM_A07G2461.1 | AT2G04850||AT5G35735 | auxin-responsive protein-related||auxin-responsive family protein | GO:0016020|membrane | GhM_A07G2137.1,GhM_D07G2037.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2289:GhM_D07G2838.1,GhM_D07G2839.1;TA3421:GhM_A07G2937.1,GhM_A07G2938.1 | AT5G08391||AT3G27030 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function | GhM_A05G4011.1,GhM_D04G0902.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2312:GhM_D08G1046.1,GhM_D08G1047.1;TA3455:GhM_A08G1180.1,GhM_A08G1181.1 | AT4G30320||AT4G25780 | allergen V5/Tpx-1-related family protein||pathogenesis-related protein, putative | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005576|extracellular region;GO:0003674|molecular_function | GhM_A05G4849.1,GhM_D04G0103.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2329:GhM_D08G2024.1,GhM_D08G2025.1;TA3470:GhM_A08G2071.1,GhM_A08G2072.1 | AT5G46700 | TET1, TRN2; TRN2 (TORNADO 2) | GO:0009933|meristem structural organization;GO:0003674|molecular_function;GO:0010305|leaf vascular tissue pattern formation;GO:0009956|radial pattern formation;GO:0005886|plasma membrane;GO:0007568|aging;GO:0010015|root morphogenesis | GhM_A03G0061.1,GhM_D03G2042.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2333:GhM_D08G2171.1,GhM_D08G2174.1;TA3474:GhM_A08G2220.1,GhM_A08G2224.1 | AT2G20580 | RPN1A, ATRPN1A; RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A); binding / enzyme regulator | GO:0051726|regulation of cell cycle;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0030234|enzyme regulator activity;GO:0005634|nucleus;GO:0005488|binding;GO:0008540|proteasome regulatory particle, base subcomplex;GO:0030163|protein catabolic process;GO:0005886|plasma membrane | GhM_A01G0220.1,GhM_D01G0197.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2343:GhM_D08G2472.1,GhM_D08G2473.1;TA3481:GhM_A08G2538.1,GhM_A08G2539.1 | AT3G25110 | AtFaTA; AtFaTA (Arabidopsis FatA acyl-ACP thioesterase); acyl carrier/ acyl-[acyl-carrier-protein] hydrolase | GO:0016297|acyl-[acyl-carrier-protein] hydrolase activity;GO:0000036|acyl carrier activity;GO:0006633|fatty acid biosynthetic process | GhM_A08G0615.1,GhM_D08G0585.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2354:GhM_D08G2823.1,GhM_D08G2824.1;TA3491:GhM_A08G2877.1,GhM_A08G2878.1 | AT5G17020 | XPO1A, ATCRM1, ATXPO1, XPO1; XPO1A; protein binding / protein transporter/ receptor | GO:0009860|pollen tube growth;GO:0005515|protein binding;GO:0004872|receptor activity;GO:0009555|pollen development;GO:0005634|nucleus;GO:0005643|nuclear pore;GO:0009846|pollen germination;GO:0006611|protein export from nucleus;GO:0005737|cytoplasm;GO:0000059|protein import into nucleus, docking;GO:0009553|embryo sac development;GO:0008565|protein transporter activity | GhM_A02G1824.1,GhM_D03G0552.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2362:GhM_D09G0025.1,GhM_D09G0027.1;TA3507:GhM_A09G0032.1,GhM_A09G0033.1 | AT1G71691||AT1G29670||AT2G03980 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0009507|chloroplast;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0048046|apoplast;GO:0005618|cell wall;GO:0004091|carboxylesterase activity | GhM_A09G0450.1,GhM_D09G0411.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2365:GhM_D09G0134.1,GhM_D09G0135.1;TA3508:GhM_A09G0134.1,GhM_A09G0135.1 | AT5G15410 | DND1, ATCNGC2, CNGC2; DND1 (DEFENSE NO DEATH 1); calcium channel/ calmodulin binding / cation channel/ cyclic nucleotide binding / intracellular cAMP activated cation channel/ intracellular cyclic nucleotide activated cation channel/ inward rectifier potassium channel | GO:0012505|endomembrane system | GhM_A05G4415.1,GhM_D04G0528.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2370:GhM_D09G0266.1,GhM_D09G0267.1;TA3517:GhM_A09G0295.1,GhM_A09G0296.1 | AT3G54320||AT1G79700 | ovule development protein, putative||WRI1, WRI, ASML1; WRI1 (WRINKLED 1); DNA binding / transcription factor | GO:0008610|lipid biosynthetic process;GO:0009744|response to sucrose stimulus;GO:0005634|nucleus;GO:0009887|organ morphogenesis;GO:0006629|lipid metabolic process;GO:0006109|regulation of carbohydrate metabolic process;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0019432|triglyceride biosynthetic process;GO:0006110|regulation of glycolysis | GhM_A05G4346.1,GhM_A07G2776.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2385:GhM_D09G0787.1,GhM_D09G0788.1;TA3531:GhM_A09G0845.1,GhM_A09G0847.1 | AT4G26740||AT2G33380 | RD20; RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding||ATS1; ATS1 (ARABIDOPSIS THALIANA SEED GENE 1); calcium ion binding | GO:0031969|chloroplast membrane;GO:0016165|lipoxygenase activity;GO:0016021|integral to membrane;GO:0005792|microsome;GO:0006952|defense response;GO:0031407|oxylipin metabolic process;GO:0005773|vacuole;GO:0009269|response to desiccation;GO:0009737|response to abscisic acid stimulus;GO:0009793|embryonic development ending in seed dormancy;GO:0009651|response to salt stress;GO:0009751|response to salicylic acid stimulus;GO:0034389|lipid particle organization;GO:0004497|monooxygenase activity;GO:0031408|oxylipin biosynthetic process;GO:0009620|response to fungus;GO:0005509|calcium ion binding;GO:0004392|heme oxygenase (decyclizing) activity;GO:0009409|response to cold | GhM_A09G0808.1,GhM_D09G0749.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2399:GhM_D09G1278.1,GhM_D09G1279.1;TA3548:GhM_A09G1360.1,GhM_A09G1362.1 | AT3G07630 | ADT2; ADT2 (arogenate dehydratase 2); arogenate dehydratase/ prephenate dehydratase | GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0009094|L-phenylalanine biosynthetic process;GO:0047769|arogenate dehydratase activity;GO:0004664|prephenate dehydratase activity | GhM_A07G1398.1,GhM_D07G1378.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2409:GhM_D09G1552.1,GhM_D09G1553.1;TA3559:GhM_A09G1653.1,GhM_A09G1655.1 | AT3G56150 | EIF3C, ATEIF3C-1, EIF3C-1, ATTIF3C1, TIF3C1; EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C); translation initiation factor | GO:0005634|nucleus;GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0005829|cytosol | GhM_A01G1573.1,GhM_A01G1574.1 | 6 | 2 | Gossypium | Cotton | |||
| TA2412:GhM_D09G1637.1,GhM_D09G1638.1;TA3561:GhM_A09G1764.1,GhM_A09G1766.1 | AT3G52610 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G0838.1,GhM_D04G1231.1 | 6 | 2 | Gossypium | Cotton | |||
| TA329:GhM_A11G2116.1,GhM_A11G2117.1,GhM_A11G2118.1,GhM_A11G2120.1;TA2603:GhM_D11G2096.1,GhM_D11G2097.1 | AT5G66420 | LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP033271 (InterPro:IPR008322), TIM-barrel signal transduction protein, predicted (InterPro:IPR009215); Has 809 Blast hits to 807 proteins in 200 species: Archae - 4; Bacteria - 603; Metazoa - 0; Fungi - 61; Plants - 24; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). | GO:0005575|cellular_component | - | 6 | 2 | Gossypium | Cotton | |||
| TA336:GhM_A11G3881.1,GhM_A11G3882.1,GhM_A11G3884.1,GhM_A11G3886.1;TA1334:GhM_A11G3880.1,GhM_A11G3887.1 | AT3G47210||AT3G50120||AT3G50150||AT3G50170 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0005886|plasma membrane;GO:0005575|cellular_component | - | 6 | 2 | Gossypium | Cotton | |||
| TA346:GhM_A13G0921.1,GhM_A13G0922.1,GhM_A13G0923.1,GhM_A13G0924.1;TA2793:GhM_D13G0863.1,GhM_D13G0867.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA347:GhM_A13G2767.1,GhM_A13G2770.1,GhM_A13G2772.1,GhM_A13G2773.1;TA2857:GhM_D13G2660.1,GhM_D13G2661.1 | AT5G66430||AT3G21950 | methyltransferase||S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0008168|methyltransferase activity;GO:0046686|response to cadmium ion;GO:0005575|cellular_component | - | 6 | 2 | Gossypium | Cotton | |||
| TA349:GhM_D01G0287.1,GhM_D01G0288.1,GhM_D01G0289.1,GhM_D01G0290.1;TA2104:GhM_A01G0309.1,GhM_A01G0310.1 | AT1G61070||AT2G02120||AT2G31953 | LCR66, PDF2.4; LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)||PDF2.1, LCR70; PDF2.1; peptidase inhibitor||LCR76; LCR76 (Low-molecular-weight cysteine-rich 76) | GO:0012505|endomembrane system;GO:0006952|defense response;GO:0030414|peptidase inhibitor activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA374:GhM_D03G0582.1,GhM_D03G0584.1,GhM_D03G0594.1,GhM_D03G0595.1;TA2922:GhM_A02G1675.1,GhM_A02G1683.1 | AT3G14470||AT3G14460 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005524|ATP binding | - | 6 | 2 | Gossypium | Cotton | |||
| TA378:GhM_D04G1368.1,GhM_D04G1369.1,GhM_D04G1370.1,GhM_D04G1371.1;TA3075:GhM_A04G0914.1,GhM_A04G0915.1 | AT1G20030||AT1G19320 | pathogenesis-related thaumatin family protein | GO:0031225|anchored to membrane;GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA411:GhM_D08G0045.1,GhM_D08G0046.1,GhM_D08G0047.1,GhM_D08G0048.1;TA3425:GhM_A08G0056.1,GhM_A08G0057.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA446:GhM_D11G2236.1,GhM_D11G2237.1,GhM_D11G2238.1,GhM_D11G2239.1;TA1276:GhM_A11G2268.1,GhM_A11G2269.1 | AT5G02100||AT1G45180 | zinc finger (C3HC4-type RING finger) family protein||UNE18, ORP3A; UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding | GO:0005515|protein binding;GO:0008142|oxysterol binding;GO:0008202|steroid metabolic process;GO:0032934|sterol binding;GO:0008270|zinc ion binding;GO:0009567|double fertilization forming a zygote and endosperm;GO:0005783|endoplasmic reticulum | - | 6 | 2 | Gossypium | Cotton | |||
| TA507:GhM_A07G0972.1,GhM_A07G0973.1,GhM_A07G0976.1,GhM_A07G0978.1;TA2230:GhM_D07G0963.1,GhM_D07G0965.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA531:GhM_A09G2412.1,GhM_A09G2415.1,GhM_A09G2416.1,GhM_A09G2421.1;TA2428:GhM_D09G2303.1,GhM_D09G2304.1 | AT1G05160||AT2G32440 | KAO2, CYP88A4; KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding||CYP88A3, ATKAO1, KAO1; CYP88A3 (CYTOCHROME P450 88 A3); ent-kaurenoate oxidase/ oxygen binding | GO:0009686|gibberellin biosynthetic process;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0051777|ent-kaurenoate oxidase activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA548:GhM_A10G1957.1,GhM_A10G1962.1,GhM_A10G1963.1;TA2472:GhM_D10G1187.1,GhM_D10G1190.1 | AT2G13680 | CALS5, GLS2, ATGSL02; CALS5 (CALLOSE SYNTHASE 5); 1,3-beta-glucan synthase | GO:0016020|membrane | GhM_A11G1470.1 | 6 | 2 | Gossypium | Cotton | |||
| TA551:GhM_A10G2183.1,GhM_A10G2184.1,GhM_A10G2186.1;TA864:GhM_D10G2112.1,GhM_D10G2113.1,GhM_D10G2116.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA553:GhM_A10G2294.1,GhM_A10G2295.1,GhM_A10G2296.1;TA866:GhM_D10G2216.1,GhM_D10G2218.1,GhM_D10G2219.1 | AT4G28680||AT2G20340 | TYRDC, TYRDC1; tyrosine decarboxylase, putative||tyrosine decarboxylase, putative | GO:0006950|response to stress;GO:0006520|cellular amino acid metabolic process;GO:0004058|aromatic-L-amino-acid decarboxylase activity;GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0009611|response to wounding;GO:0005737|cytoplasm;GO:0016831|carboxy-lyase activity;GO:0004837|tyrosine decarboxylase activity;GO:0005575|cellular_component | - | 6 | 2 | Gossypium | Cotton | |||
| TA567:GhM_A10G2955.1,GhM_A10G2956.1,GhM_A10G2972.1;TA2531:GhM_D10G2921.1,GhM_D10G2922.1 | - | - | - | GhM_D10G1101.1 | 6 | 2 | Gossypium | Cotton | |||
| TA569:GhM_A11G0124.1,GhM_A11G0125.1,GhM_A11G0127.1;TA879:GhM_D11G0120.1,GhM_D11G0121.1,GhM_D11G0123.1 | AT1G02260 | transmembrane protein, putative | GO:0012505|endomembrane system;GO:0015137|citrate transmembrane transporter activity;GO:0015746|citrate transport | - | 6 | 2 | Gossypium | Cotton | |||
| TA576:GhM_A11G1626.1,GhM_A11G1628.1,GhM_A11G1630.1;TA2590:GhM_D11G1616.1,GhM_D11G1618.1 | AT3G13350||AT4G04940||AT1G04880 | high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein||transducin family protein / WD-40 repeat family protein | GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0045449|regulation of transcription;GO:0006364|rRNA processing;GO:0005622|intracellular;GO:0003700|transcription factor activity | GhM_A11G1631.1 | 6 | 2 | Gossypium | Cotton | |||
| TA578:GhM_A11G1984.1,GhM_A11G1985.1,GhM_A11G1988.1;TA885:GhM_D11G1974.1,GhM_D11G1975.1,GhM_D11G1976.1 | AT4G35680||AT2G17680||AT3G51400 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA587:GhM_A11G3172.1,GhM_A11G3175.1,GhM_A11G3178.1;TA891:GhM_D11G3097.1,GhM_D11G3100.1,GhM_D11G3101.1 | AT3G04720 | PR4, HEL, PR-4; PR4 (PATHOGENESIS-RELATED 4); chitin binding | GO:0012505|endomembrane system;GO:0009615|response to virus;GO:0009627|systemic acquired resistance;GO:0009651|response to salt stress;GO:0009817|defense response to fungus, incompatible interaction;GO:0009723|response to ethylene stimulus;GO:0008061|chitin binding | - | 6 | 2 | Gossypium | Cotton | |||
| TA600:GhM_A12G0481.1,GhM_A12G0483.1,GhM_A12G0484.1;TA906:GhM_D12G0478.1,GhM_D12G0479.1,GhM_D12G0485.1 | AT1G05920 | DNA binding | GO:0003677|DNA binding;GO:0005575|cellular_component;GO:0006355|regulation of transcription, DNA-dependent | - | 6 | 2 | Gossypium | Cotton | |||
| TA605:GhM_A12G1327.1,GhM_A12G1328.1,GhM_A12G1329.1;TA914:GhM_D12G1263.1,GhM_D12G1264.1,GhM_D12G1265.1 | AT2G13620 | ATCHX15, CHX15; ATCHX15; monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | - | 6 | 2 | Gossypium | Cotton | |||
| TA606:GhM_A12G1367.1,GhM_A12G1368.1,GhM_A12G1369.1;TA915:GhM_D12G1306.1,GhM_D12G1307.1,GhM_D12G1308.1 | AT1G01900 | ATSBT1.1, SBTI1.1; SBTI1.1; serine-type endopeptidase | GO:0004252|serine-type endopeptidase activity;GO:0031012|extracellular matrix;GO:0048046|apoplast;GO:0043086|negative regulation of catalytic activity;GO:0005618|cell wall;GO:0006508|proteolysis | - | 6 | 2 | Gossypium | Cotton | |||
| TA608:GhM_A12G1520.1,GhM_A12G1521.1,GhM_A12G1525.1;TA2717:GhM_D12G1463.1,GhM_D12G1465.1 | AT1G32300||AT2G46760||AT2G46740 | FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0003885|D-arabinono-1,4-lactone oxidase activity;GO:0005618|cell wall;GO:0016020|membrane;GO:0050660|FAD binding;GO:0016491|oxidoreductase activity | GhM_A12G1522.1 | 6 | 2 | Gossypium | Cotton | |||
| TA615:GhM_A12G3129.1,GhM_A12G3130.1,GhM_A12G3131.1;TA2758:GhM_D12G3014.1,GhM_D12G3016.1 | AT5G52740||AT1G01490 | heavy-metal-associated domain-containing protein | GO:0046872|metal ion binding;GO:0005575|cellular_component;GO:0030001|metal ion transport | GhM_D12G3015.1 | 6 | 2 | Gossypium | Cotton | |||
| TA627:GhM_A13G1218.1,GhM_A13G1220.1,GhM_A13G1221.1;TA937:GhM_D13G0984.1,GhM_D13G0985.1,GhM_D13G0987.1 | AT5G15740||AT3G02250||AT1G14020 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA629:GhM_A13G1695.1,GhM_A13G1697.1,GhM_A13G1698.1;TA940:GhM_D13G1570.1,GhM_D13G1571.1,GhM_D13G1572.1 | AT4G05100||AT4G21440||AT5G62470 | ATMYB102, ATM4; ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor||MYB96, MYBCOV1, ATMYB96; MYB96 (myb domain protein 96); DNA binding / transcription factor||AtMYB74; AtMYB74 (myb domain protein 74); DNA binding / transcription factor | GO:0010468|regulation of gene expression;GO:0009737|response to abscisic acid stimulus;GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0006970|response to osmotic stress;GO:0009611|response to wounding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009414|response to water deprivation;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | - | 6 | 2 | Gossypium | Cotton | |||
| TA650:GhM_D01G0924.1,GhM_D01G0926.1,GhM_D01G0928.1;TA784:GhM_A01G0966.1,GhM_A01G0968.1,GhM_A01G0970.1 | AT5G55630 | KCO1, TPK1, ATKCO1, ATTPK1; ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel | GO:0030007|cellular potassium ion homeostasis;GO:0015271|outward rectifier potassium channel activity;GO:0010029|regulation of seed germination;GO:0051260|protein homooligomerization;GO:0010119|regulation of stomatal movement;GO:0005774|vacuolar membrane;GO:0015269|calcium-activated potassium channel activity;GO:0005216|ion channel activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA661:GhM_D01G2372.1,GhM_D01G2373.1,GhM_D01G2374.1;TA793:GhM_A01G2436.1,GhM_A01G2437.1,GhM_A01G2438.1 | AT5G06900||AT2G42250 | CYP712A1; CYP712A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP93D1; CYP93D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA664:GhM_D02G0068.1,GhM_D02G0071.1,GhM_D02G0072.1;TA2871:GhM_A02G0064.1,GhM_A02G0065.1 | AT3G03080||AT5G16990 | NADP-dependent oxidoreductase, putative | GO:0006979|response to oxidative stress;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A02G0062.1 | 6 | 2 | Gossypium | Cotton | |||
| TA674:GhM_D02G2191.1,GhM_D02G2192.1,GhM_D02G2193.1;TA973:GhM_A03G2167.1,GhM_A03G2168.1,GhM_A03G2169.1 | AT4G03230 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA677:GhM_D02G2607.1,GhM_D02G2608.1,GhM_D02G2610.1;TA3035:GhM_A03G2581.1,GhM_A03G2582.1 | AT2G21340 | antiporter/ drug transporter | GO:0015297|antiporter activity;GO:0009507|chloroplast;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity | GhM_D02G2609.1 | 6 | 2 | Gossypium | Cotton | |||
| TA681:GhM_D03G0959.1,GhM_D03G0961.1,GhM_D03G0963.1;TA957:GhM_A02G1279.1,GhM_A02G1280.1,GhM_A02G1281.1 | AT5G41610 | ATCHX18, CHX18; ATCHX18; monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | - | 6 | 2 | Gossypium | Cotton | |||
| TA698:GhM_D04G0473.1,GhM_D04G0488.1,GhM_D04G0489.1;TA3238:GhM_A05G4459.1,GhM_A05G4462.1 | AT3G58640 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_Scaf001G003.1 | 6 | 2 | Gossypium | Cotton | |||
| TA699:GhM_D04G0483.1,GhM_D04G0492.1,GhM_D04G0493.1;TA3235:GhM_A05G4453.1,GhM_A05G4454.1 | AT1G06230 | GTE4; GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4); DNA binding | GO:0048364|root development;GO:0009294|DNA mediated transformation;GO:0003677|DNA binding;GO:0007049|cell cycle;GO:0005575|cellular_component | GhM_Scaf001G009.1 | 6 | 2 | Gossypium | Cotton | |||
| TA700:GhM_D04G0550.1,GhM_D04G0552.1,GhM_D04G0559.1;TA1048:GhM_A05G4384.1,GhM_A05G4389.1,GhM_A05G4393.1 | AT3G28410 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA709:GhM_D04G1969.1,GhM_D04G1970.1,GhM_D04G1971.1;TA1006:GhM_A04G1478.1,GhM_A04G1479.1,GhM_A04G1481.1 | AT5G64230 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA717:GhM_D05G0078.1,GhM_D05G0079.1,GhM_D05G0080.1;TA1013:GhM_A05G0074.1,GhM_A05G0075.1,GhM_A05G0076.1 | AT4G19520||AT3G07040||AT3G50950 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (TIR-NBS-LRR class), putative||RPM1, RPS3; RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding | GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0000166|nucleotide binding;GO:0006915|apoptosis;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding | - | 6 | 2 | Gossypium | Cotton | |||
| TA720:GhM_D05G0681.1,GhM_D05G0683.1,GhM_D05G0684.1;TA1017:GhM_A05G0661.1,GhM_A05G0663.1,GhM_A05G0664.1 | AT5G10820||AT5G25050 | integral membrane transporter family protein | GO:0016020|membrane;GO:0005215|transporter activity;GO:0006810|transport | - | 6 | 2 | Gossypium | Cotton | |||
| TA721:GhM_D05G0757.1,GhM_D05G0758.1,GhM_D05G0759.1;TA3134:GhM_A05G0733.1,GhM_A05G0734.1 | AT5G60900 | RLK1; RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0732.1 | 6 | 2 | Gossypium | Cotton | |||
| TA724:GhM_D05G1587.1,GhM_D05G1588.1,GhM_D05G1589.1;TA1021:GhM_A05G1573.1,GhM_A05G1574.1,GhM_A05G1575.1 | AT5G40990||AT1G53920 | GLIP1; GLIP1 (GDSL LIPASE1); carboxylesterase/ lipase||GLIP5; GLIP5; carboxylesterase/ lipase | GO:0009620|response to fungus;GO:0009866|induced systemic resistance, ethylene mediated signaling pathway;GO:0009751|response to salicylic acid stimulus;GO:0006629|lipid metabolic process;GO:0005615|extracellular space;GO:0004091|carboxylesterase activity;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium;GO:0016298|lipase activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA728:GhM_D05G2250.1,GhM_D05G2251.1,GhM_D05G2252.1;TA1022:GhM_A05G2231.1,GhM_A05G2232.1,GhM_A05G2233.1 | AT1G69850||AT5G46040 | proton-dependent oligopeptide transport (POT) family protein||ATNRT1:2, NTL1; ATNRT1:2 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1:2); calcium ion binding / transporter | GO:0009624|response to nematode;GO:0005509|calcium ion binding;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA734:GhM_D05G2941.1,GhM_D05G2942.1,GhM_D05G2943.1;TA1031:GhM_A05G2927.1,GhM_A05G2928.1,GhM_A05G2929.1 | AT1G24620 | polcalcin, putative / calcium-binding pollen allergen, putative | GO:0005634|nucleus;GO:0009409|response to cold;GO:0005737|cytoplasm;GO:0005509|calcium ion binding | - | 6 | 2 | Gossypium | Cotton | |||
| TA737:GhM_D05G3165.1,GhM_D05G3166.1,GhM_D05G3167.1;TA1034:GhM_A05G3162.1,GhM_A05G3163.1,GhM_A05G3164.1 | AT2G38760||AT2G38750 | ANNAT3; ANNAT3 (ANNEXIN ARABIDOPSIS 3); calcium ion binding / calcium-dependent phospholipid binding||ANNAT4; ANNAT4 (ANNEXIN ARABIDOPSIS 4); calcium ion binding / calcium-dependent phospholipid binding | GO:0005509|calcium ion binding;GO:0009737|response to abscisic acid stimulus;GO:0009986|cell surface;GO:0006970|response to osmotic stress;GO:0005544|calcium-dependent phospholipid binding;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0005773|vacuole;GO:0009409|response to cold | - | 6 | 2 | Gossypium | Cotton | |||
| TA738:GhM_D05G3271.1,GhM_D05G3272.1,GhM_D05G3273.1;TA1039:GhM_A05G3286.1,GhM_A05G3287.1,GhM_A05G3288.1 | AT1G76520||AT1G20925 | auxin efflux carrier family protein | GO:0012505|endomembrane system;GO:0009926|auxin polar transport;GO:0016021|integral to membrane;GO:0009672|auxin:hydrogen symporter activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA742:GhM_D05G4049.1,GhM_D05G4050.1,GhM_D05G4051.1;TA988:GhM_A04G0321.1,GhM_A04G0322.1,GhM_A04G0323.1 | AT1G53130 | GRI; GRI (GRIM REAPER) | GO:0009863|salicylic acid mediated signaling pathway;GO:0010193|response to ozone;GO:0048316|seed development;GO:0005615|extracellular space;GO:0009867|jasmonic acid mediated signaling pathway;GO:0042742|defense response to bacterium | - | 6 | 2 | Gossypium | Cotton | |||
| TA745:GhM_D05G4107.1,GhM_D05G4108.1,GhM_D05G4109.1;TA985:GhM_A04G0279.1,GhM_A04G0281.1,GhM_A04G0282.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA747:GhM_D05G4240.1,GhM_D05G4241.1,GhM_D05G4242.1;TA983:GhM_A04G0160.1,GhM_A04G0161.1,GhM_A04G0162.1 | AT1G50710 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 6 | 2 | Gossypium | Cotton | |||
| TA749:GhM_D05G4302.1,GhM_D05G4304.1,GhM_D05G4305.1;TA3043:GhM_A04G0104.1,GhM_A04G0108.1 | AT5G55380||AT5G55340||AT5G55370||AT5G55330 | membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related||long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein | GO:0008150|biological_process;GO:0008415|acyltransferase activity;GO:0009579|thylakoid;GO:0005575|cellular_component | GhM_D05G4303.1 | 6 | 2 | Gossypium | Cotton | |||
| TA762:GhM_D06G0743.1,GhM_D06G0744.1,GhM_D06G0745.1;TA1057:GhM_A06G0744.1,GhM_A06G0745.1,GhM_A06G0746.1 | AT3G18830||AT5G59250 | ATPLT5; ATPLT5 (POLYOL TRANSPORTER 5); D-ribose transmembrane transporter/ D-xylose transmembrane transporter/ carbohydrate transmembrane transporter/ galactose transmembrane transporter/ glucose transmembrane transporter/ glycerol transmembrane transporter/ mann||sugar transporter family protein | GO:0015575|mannitol transmembrane transporter activity;GO:0009507|chloroplast;GO:0009941|chloroplast envelope;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005354|galactose transmembrane transporter activity;GO:0055085|transmembrane transport;GO:0015576|sorbitol transmembrane transporter activity;GO:0015168|glycerol transmembrane transporter activity;GO:0005365|myo-inositol transmembrane transporter activity;GO:0005355|glucose transmembrane transporter activity;GO:0015148|D-xylose transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0015591|D-ribose transmembrane transporter activity;GO:0015145|monosaccharide transmembrane transporter activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA763:GhM_D06G1067.1,GhM_D06G1068.1,GhM_D06G1069.1;TA1058:GhM_A06G1058.1,GhM_A06G1059.1,GhM_A06G1060.1 | AT2G40210 | AGL48; AGL48 (AGAMOUS-LIKE 48); transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | - | 6 | 2 | Gossypium | Cotton | |||
| TA768:GhM_D06G2163.1,GhM_D06G2164.1,GhM_D06G2165.1;TA1064:GhM_A06G2184.1,GhM_A06G2185.1,GhM_A06G2186.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA803:GhM_D07G0691.1,GhM_D07G0692.1,GhM_D07G0694.1;TA1068:GhM_A07G0698.1,GhM_A07G0700.1,GhM_A07G0701.1 | AT3G57030||AT1G08470||AT3G57010 | strictosidine synthase family protein | GO:0009505|plant-type cell wall;GO:0009821|alkaloid biosynthetic process;GO:0009058|biosynthetic process;GO:0016844|strictosidine synthase activity;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | - | 6 | 2 | Gossypium | Cotton | |||
| TA806:GhM_D07G1097.1,GhM_D07G1099.1,GhM_D07G1100.1;TA1074:GhM_A07G1117.1,GhM_A07G1118.1,GhM_A07G1119.1 | AT3G25180 | CYP82G1; CYP82G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 6 | 2 | Gossypium | Cotton | |||
| TA827:GhM_D08G2013.1,GhM_D08G2015.1,GhM_D08G2016.1;TA1095:GhM_A08G2063.1,GhM_A08G2064.1,GhM_A08G2065.1 | AT3G02940 | MYB107, AtMYB107; MYB107 (myb domain protein 107); DNA binding / transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | - | 6 | 2 | Gossypium | Cotton | |||
| TA831:GhM_D08G2702.1,GhM_D08G2707.1,GhM_D08G2713.1;TA1103:GhM_A08G2762.1,GhM_A08G2768.1,GhM_A08G2771.1 | AT2G05260 | lipase class 3 family protein | GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | - | 6 | 2 | Gossypium | Cotton | |||
| TA838:GhM_D09G1100.1,GhM_D09G1101.1,GhM_D09G1103.1;TA3542:GhM_A09G1168.1,GhM_A09G1170.1 | AT5G22860 | serine carboxypeptidase S28 family protein | GO:0006508|proteolysis;GO:0008233|peptidase activity;GO:0008236|serine-type peptidase activity;GO:0012505|endomembrane system | GhM_A05G0932.1 | 6 | 2 | Gossypium | Cotton | |||
| TA842:GhM_D09G1630.1,GhM_D09G1631.1,GhM_D09G1633.1;TA1113:GhM_A09G1770.1,GhM_A09G1771.1,GhM_A09G1772.1 | AT5G48670||AT2G28700||AT2G40210 | FEM111, AGL80; AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor||AGL48; AGL48 (AGAMOUS-LIKE 48); transcription factor||AGL46; AGL46 (AGAMOUS-LIKE 46); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 6 | 2 | Gossypium | Cotton | |||
| TA846:GhM_D09G2526.1,GhM_D09G2527.1,GhM_D09G2528.1;TA1121:GhM_A09G2644.1,GhM_A09G2645.1,GhM_A09G2646.1 | AT2G32120 | HSP70T-2; HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2); ATP binding | GO:0009644|response to high light intensity;GO:0042542|response to hydrogen peroxide;GO:0005524|ATP binding;GO:0009408|response to heat;GO:0006457|protein folding;GO:0005575|cellular_component | - | 6 | 2 | Gossypium | Cotton | |||
| TA847:GhM_D09G2581.1,GhM_D09G2582.1,GhM_D09G2583.1;TA1122:GhM_A09G2703.1,GhM_A09G2704.1,GhM_A09G2705.1 | - | - | - | - | 6 | 2 | Gossypium | Cotton | |||
| TA934:GhM_D13G0923.1,GhM_D13G0924.1,GhM_D13G0925.1;TA1485:GhM_A13G0993.1,GhM_A13G0995.1 | AT1G26560 | BGLU40; BGLU40 (BETA GLUCOSIDASE 40); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0048046|apoplast | GhM_D12G1994.1 | 6 | 2 | Gossypium | Cotton | |||
| TA935:GhM_D13G0969.1,GhM_D13G0970.1,GhM_D13G0971.1;TA1483:GhM_A13G0952.1,GhM_A13G0955.1 | AT3G51550||AT3G04690 | FER; FER (FERONIA); kinase/ protein kinase||protein kinase family protein | GO:0009860|pollen tube growth;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0016324|apical plasma membrane;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0043680|filiform apparatus;GO:0004674|protein serine/threonine kinase activity | GhM_A13G0949.1 | 6 | 2 | Gossypium | Cotton | |||
| TA966:GhM_A02G2230.1,GhM_A02G2231.1,GhM_A02G2232.1;TA1720:GhM_D03G0038.1,GhM_D03G0040.1 | AT2G17080||AT2G17680||AT4G35660 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D03G0039.1 | 6 | 2 | Gossypium | Cotton | |||
| TA979:GhM_A03G2803.1,GhM_A03G2809.1,GhM_A03G2810.1;TA1716:GhM_D02G2812.1,GhM_D02G2818.1 | AT3G50150||AT3G50170||AT3G50140 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0005575|cellular_component | GhM_A04G0346.1 | 6 | 2 | Gossypium | Cotton | |||
| TA1306:GhM_A11G3242.1,GhM_A11G3243.1;TA2632:GhM_D11G3165.1,GhM_D11G3166.1;TA1307:GhM_A11G3244.1,GhM_A11G3245.1 | AT3G03980||AT4G13180||AT4G13650 | pentatricopeptide (PPR) repeat-containing protein||short-chain dehydrogenase/reductase (SDR) family protein | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0046685|response to arsenic;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | - | 6 | 3 | Gossypium | Cotton | |||
| TA1910:GhM_D05G1545.1,GhM_D05G1546.1;TA3153:GhM_A05G1528.1,GhM_A05G1530.1;TA3154:GhM_A05G1529.1,GhM_A05G1531.1 | AT4G33090 | APM1, ATAPM1; APM1 (AMINOPEPTIDASE M1); aminopeptidase | GO:0005886|plasma membrane;GO:0009926|auxin polar transport | - | 6 | 3 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G0005.1,GhM_A13G0002.1,GhM_A10G0003.1,GhM_Scaf009G111.1,GhM_D02G1230.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G16370 | THY-1; THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase | GO:0009257|10-formyltetrahydrofolate biosynthetic process;GO:0004799|thymidylate synthase activity;GO:0005575|cellular_component;GO:0004146|dihydrofolate reductase activity | GhM_A01G0068.1,GhM_D01G0050.1,GhM_A03G2557.1,GhM_D02G2584.1,GhM_D11G3045.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G60995 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0075.1,GhM_D01G0057.1,GhM_A04G1590.1,GhM_D04G2066.1,GhM_D04G2067.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G53025||AT3G15355 | ||UBC25, PFU1; UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase | ;GO:0051246|regulation of protein metabolic process;GO:0043687|post-translational protein modification;GO:0019787|small conjugating protein ligase activity | GhM_A01G0205.1,GhM_D01G0184.1,GhM_A01G0206.1,GhM_A03G2099.1,GhM_D02G2124.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G20780||AT1G76390||AT5G42340 | PUB44, ATPUB44, SAUL1; SAUL1 (SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1); ubiquitin-protein ligase||armadillo/beta-catenin repeat family protein / U-box domain-containing protein||binding / ubiquitin-protein ligase | GO:0010271|regulation of chlorophyll catabolic process;GO:0005488|binding;GO:0000151|ubiquitin ligase complex;GO:0010149|senescence;GO:0010115|regulation of abscisic acid biosynthetic process;GO:0010380|regulation of chlorophyll biosynthetic process;GO:0004842|ubiquitin-protein ligase activity;GO:0005886|plasma membrane;GO:0016567|protein ubiquitination | GhM_A01G0225.1,GhM_D01G0201.1,GhM_A01G0226.1,GhM_A03G2065.1,GhM_D02G2090.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G13170 | SAG29; SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A01G0244.1,GhM_D01G0216.1,GhM_A04G1297.1,GhM_D04G1779.1,GhM_D02G2061.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05990 | leucine-rich repeat family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction | GhM_A01G0257.1,GhM_D01G0225.1,GhM_A09G2632.1,GhM_D09G2513.1,GhM_D09G0795.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G18910 | protein kinase family protein | GO:0005777|peroxisome;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G0288.1,GhM_D01G0257.1,GhM_D09G0806.1,GhM_A10G1215.1,GhM_D10G1910.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G56020||AT1G79060 | unknown protein | ;GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0346.1,GhM_D01G0330.1,GhM_D05G3808.1,GhM_A13G2060.1,GhM_D13G1951.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G61580||AT5G06240 | RPL3B, ARP2; RPL3B (R-PROTEIN L3 B); structural constituent of ribosome||emb2735; emb2735 (embryo defective 2735) | GO:0003674|molecular_function;GO:0009793|embryonic development ending in seed dormancy;GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A01G0405.1,GhM_A10G1835.1,GhM_A03G2726.1,GhM_A07G2335.1,GhM_A13G1593.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G14590 | NTMC2TYPE6.2, NTMC2T6.2; NTMC2T6.2; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: NTMC2T6.1 (TAIR:AT1G53590.1); Has 3079 Blast hits to 2709 proteins in 189 species: Archae - 0; Bacteria - 2; Metazoa - 1922; Fungi - 332; Plants - 570; Viruses - 0; Other Eukaryotes - 253 (source: NCBI BLink). | GO:0009507|chloroplast | GhM_A01G0429.1,GhM_D01G0419.1,GhM_Scaf066G214.1,GhM_A04G0513.1,GhM_D01G0420.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G14830||AT1G53450 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0548.1,GhM_D01G0516.1,GhM_A13G2015.1,GhM_A09G1462.1,GhM_D13G1910.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G03365||AT4G03000 | ||protein binding / zinc ion binding | ;GO:0005515|protein binding;GO:0008150|biological_process;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G0781.1,GhM_A02G0508.1,GhM_D02G0500.1,GhM_D09G2708.1,GhM_A09G2833.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G0821.1,GhM_A12G0578.1,GhM_A09G1817.1,GhM_A09G2588.1,GhM_A13G0871.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G55560 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A01G0933.1,GhM_D01G0890.1,GhM_A11G1765.1,GhM_D11G1750.1,GhM_D13G1717.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G55610 | unknown protein | GO:0009536|plastid;GO:0009507|chloroplast;GO:0016020|membrane;GO:0005739|mitochondrion | GhM_A01G0963.1,GhM_D01G0921.1,GhM_A13G1808.1,GhM_D13G1689.1,GhM_D06G1936.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G16520||AT3G12890||AT1G56080 | unknown protein||ASML2; ASML2 (ACTIVATOR OF SPOMIN::LUC2); transcription activator | GO:0008150|biological_process;GO:0016563|transcription activator activity;GO:0003674|molecular_function;GO:0010182|sugar mediated signaling pathway;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A01G1030.1,GhM_D01G0987.1,GhM_A11G3695.1,GhM_D11G3622.1,GhM_D01G0988.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G76400 | ribophorin I family protein | GO:0004576|oligosaccharyl transferase activity;GO:0006486|protein amino acid glycosylation;GO:0004579|dolichyl-diphosphooligosaccharide-protein glycotransferase activity;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A01G1118.1,GhM_D01G1083.1,GhM_A01G1119.1,GhM_A02G1105.1,GhM_D02G1136.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G20693 | HMGB2, HMG BETA 1, NFD2, NFD02; HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | GO:0030527|structural constituent of chromatin;GO:0006333|chromatin assembly or disassembly;GO:0003682|chromatin binding;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0000785|chromatin | GhM_A01G1139.1,GhM_D01G1097.1,GhM_A02G1101.1,GhM_D02G1132.1,GhM_A05G2005.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G43800||AT3G25500 | AFH1, FH1, AHF1, ATFH1; AFH1 (FORMIN HOMOLOGY 1); actin binding / actin filament binding / protein binding||formin homology 2 domain-containing protein / FH2 domain-containing protein | GO:0005515|protein binding;GO:0051015|actin filament binding;GO:0030036|actin cytoskeleton organization;GO:0005886|plasma membrane;GO:0003779|actin binding;GO:0016020|membrane;GO:0016043|cellular component organization | GhM_A01G1156.1,GhM_A10G1820.1,GhM_A02G0074.1,GhM_D02G0083.1,GhM_D10G1312.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G42270||AT1G50250 | FTSH1; FTSH1 (FtsH protease 1); ATP-dependent peptidase/ ATPase/ metallopeptidase||VAR1, FTSH5; VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | GO:0005515|protein binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0031977|thylakoid lumen;GO:0010205|photoinhibition;GO:0010304|PSII associated light-harvesting complex II catabolic process;GO:0009579|thylakoid;GO:0030163|protein catabolic process;GO:0010206|photosystem II repair;GO:0016887|ATPase activity;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A01G1168.1,GhM_D01G1142.1,GhM_A05G2024.1,GhM_D05G2036.1,GhM_D05G2035.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G20510 | OPCL1; OPCL1 (OPC-8:0 COA LIGASE1); 4-coumarate-CoA ligase | GO:0009695|jasmonic acid biosynthetic process;GO:0005777|peroxisome;GO:0009611|response to wounding;GO:0009698|phenylpropanoid metabolic process;GO:0016207|4-coumarate-CoA ligase activity | GhM_A01G1174.1,GhM_D01G1149.1,GhM_D01G1150.1,GhM_A02G1079.1,GhM_D02G1112.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G1183.1,GhM_A05G4372.1,GhM_A10G2244.1,GhM_D05G2568.1,GhM_D06G1788.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G20180 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1198.1,GhM_D01G1175.1,GhM_D05G2074.1,GhM_A05G2058.1,GhM_A05G2059.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G52580 | RAB GTPase activator | GO:0032313|regulation of Rab GTPase activity;GO:0005622|intracellular;GO:0005097|RAB GTPase activator activity | GhM_A01G1203.1,GhM_A02G1134.1,GhM_A05G4580.1,GhM_D06G0828.1,GhM_A06G1948.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G72370 | P40, AP40, RP40, RPSAA; P40; structural constituent of ribosome | GO:0015935|small ribosomal subunit;GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0006970|response to osmotic stress;GO:0042256|mature ribosome assembly;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A01G1212.1,GhM_A10G0571.1,GhM_A06G1882.1,GhM_D06G1881.1,GhM_D10G0547.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G33300 | ADR1-L1; ADR1-L1 (ADR1-like 1); ATP binding / protein binding | GO:0005515|protein binding;GO:0048046|apoplast;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005524|ATP binding | GhM_A01G1312.1,GhM_D01G1285.1,GhM_A05G2236.1,GhM_D05G2255.1,GhM_D05G2936.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G43020 | leucine-rich repeat transmembrane protein kinase, putative | GO:0012505|endomembrane system | GhM_A01G1359.1,GhM_D01G1330.1,GhM_A01G1360.1,GhM_D05G2321.1,GhM_A05G2305.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G20600 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 444 Blast hits to 431 proteins in 151 species: Archae - 0; Bacteria - 10; Metazoa - 196; Fungi - 114; Plants - 27; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | GO:0006364|rRNA processing;GO:0003674|molecular_function;GO:0030688|preribosome, small subunit precursor | GhM_A01G1391.1,GhM_D01G1366.1,GhM_A01G1392.1,GhM_A06G0273.1,GhM_D06G0273.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G45900||AT1G63670 | unknown protein | GO:0008150|biological_process;GO:0009739|response to gibberellin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1397.1,GhM_D12G2730.1,GhM_A12G2845.1,GhM_A05G0318.1,GhM_D12G2731.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G38650||AT4G38300 | glycosyl hydrolase family 10 protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0003824|catalytic activity;GO:0043169|cation binding | GhM_A01G1412.1,GhM_A01G2079.1,GhM_D01G2046.1,GhM_A05G3716.1,GhM_D10G1453.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G27595 | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding (TAIR:AT5G01400.1); Has 529 Blast hits to 235 proteins in 85 species: Archae - 0; Bacteria - 3; Metazoa - 125; Fungi - 41; Plants - 31; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink). | - | GhM_A01G1416.1,GhM_D01G1387.1,GhM_A05G2419.1,GhM_D05G2431.1,GhM_D05G2432.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G29430 | rps15ae; rps15ae (ribosomal protein S15A E); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0005739|mitochondrion;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0005773|vacuole | GhM_A01G1420.1,GhM_D05G0317.1,GhM_A03G1559.1,GhM_A05G0302.1,GhM_D08G3067.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G10540||AT5G04510 | PDK1, ATPDK1; PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase||3-phosphoinositide-dependent protein kinase, putative | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0035091|phosphoinositide binding;GO:0006468|protein amino acid phosphorylation;GO:0004676|3-phosphoinositide-dependent protein kinase activity;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0045860|positive regulation of protein kinase activity | GhM_A01G1514.1,GhM_D01G1459.1,GhM_A05G3294.1,GhM_D05G3282.1,GhM_A05G4699.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G02100||AT4G28470 | RPN1B, ATRPN1B; RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B); binding / enzyme regulator||leucine carboxyl methyltransferase family protein | GO:0008150|biological_process;GO:0030234|enzyme regulator activity;GO:0008168|methyltransferase activity;GO:0005488|binding;GO:0008540|proteasome regulatory particle, base subcomplex;GO:0030163|protein catabolic process;GO:0005575|cellular_component | GhM_A01G1534.1,GhM_A09G1498.1,GhM_A01G1536.1,GhM_A08G0385.1,GhM_D08G0373.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G06440 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_A01G1559.1,GhM_D01G1519.1,GhM_A01G1560.1,GhM_A09G1674.1,GhM_D09G1576.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00140 | ATPH; ATPase III subunit | GO:0015986|ATP synthesis coupled proton transport;GO:0015078|hydrogen ion transmembrane transporter activity | GhM_A01G1650.1,GhM_Scaf220G348.1,GhM_D08G1213.1,GhM_D10G2444.1,GhM_D10G1555.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G24100 | UGT74B1; UGT74B1 (UDP-glucosyl transferase 74B1); UDP-glycosyltransferase/ thiohydroximate beta-D-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008194|UDP-glycosyltransferase activity;GO:0019761|glucosinolate biosynthetic process;GO:0052544|callose deposition in cell wall during defense response;GO:0016757|transferase activity, transferring glycosyl groups;GO:0042742|defense response to bacterium;GO:0005575|cellular_component;GO:0047251|thiohydroximate beta-D-glucosyltransferase activity | GhM_A01G1713.1,GhM_D01G1694.1,GhM_A05G3834.1,GhM_D05G3714.1,GhM_D10G1825.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG01050 | NDHD; Represents a plastid-encoded subunit of a NAD(P)H dehydrogenase complex. Its mRNA is edited at four positions. Translation data is not available for this gene. | GO:0009507|chloroplast;GO:0042773|ATP synthesis coupled electron transport | GhM_A01G1760.1,GhM_A03G1575.1,GhM_D06G1669.1,GhM_A07G1594.1,GhM_A11G2340.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G1807.1,GhM_A10G2055.1,GhM_A09G0655.1,GhM_A11G1382.1,GhM_D10G1992.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G70780 | unknown protein | GO:0005739|mitochondrion | GhM_A01G1869.1,GhM_D01G1829.1,GhM_A12G1971.1,GhM_D12G1883.1,GhM_D02G1690.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G71010 | phosphatidylinositol-4-phosphate 5-kinase family protein | GO:0005515|protein binding;GO:0046488|phosphatidylinositol metabolic process;GO:0044267|cellular protein metabolic process;GO:0016307|phosphatidylinositol phosphate kinase activity;GO:0005524|ATP binding | GhM_A01G1890.1,GhM_D01G1861.1,GhM_A03G1663.1,GhM_D02G1723.1,GhM_A03G1664.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G27340 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G1911.1,GhM_D01G1889.1,GhM_A03G1690.1,GhM_D02G1764.1,GhM_D02G1763.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G17610 | tRNA/rRNA methyltransferase (SpoU) family protein | GO:0006396|RNA processing;GO:0003723|RNA binding;GO:0008173|RNA methyltransferase activity;GO:0012505|endomembrane system | GhM_A01G1957.1,GhM_D11G2267.1,GhM_A12G2677.1,GhM_D12G2565.1,GhM_D02G1647.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G13130||AT3G26140 | glycosyl hydrolase family 5 protein / cellulase family protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0005575|cellular_component | GhM_A01G1962.1,GhM_D01G1966.1,GhM_A04G1799.1,GhM_D04G2273.1,GhM_A04G1798.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G70590 | F-box family protein | GO:0005488|binding;GO:0009507|chloroplast | GhM_A01G1981.1,GhM_D01G1950.1,GhM_A05G3654.1,GhM_D05G3611.1,GhM_D05G3610.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G70610 | ATTAP1; ATTAP1; ATPase, coupled to transmembrane movement of substances / transporter | GO:0009507|chloroplast;GO:0006810|transport | GhM_A01G1988.1,GhM_D01G1945.1,GhM_D09G0361.1,GhM_A09G0396.1,GhM_D09G0360.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G10657 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2023.1,GhM_D01G1936.1,GhM_D04G2261.1,GhM_A04G1786.1,GhM_A05G4278.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G33980 | ATUPF3, UPF3; Smg-4/UPF3 family protein | GO:0000166|nucleotide binding;GO:0000184|nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0005575|cellular_component | GhM_A01G2051.1,GhM_D02G2791.1,GhM_A03G2785.1,GhM_A12G0491.1,GhM_D12G0487.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G33793 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2081.1,GhM_A11G3623.1,GhM_A05G3906.1,GhM_A10G0276.1,GhM_D10G0260.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G54630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 19800 Blast hits to 12108 proteins in 845 species: Archae - 345; Bacteria - 1709; Metazoa - 11031; Fungi - 1499; Plants - 797; Viruses - 39; Other Eukaryotes - 4380 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2196.1,GhM_A03G2715.1,GhM_D02G2733.1,GhM_D01G2162.1,GhM_D01G2163.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A01G2259.1,GhM_A03G0074.1,GhM_A07G2443.1,GhM_A08G1223.1,GhM_A12G2361.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G44770 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2354.1,GhM_D01G2299.1,GhM_A05G2621.1,GhM_D05G2636.1,GhM_D06G1548.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G52630 | MEF1; MEF1 (MITOCHONDRIAL RNA EDITING FACTOR 1) | GO:0016554|cytidine to uridine editing;GO:0005575|cellular_component | GhM_A01G2451.1,GhM_D08G0368.1,GhM_A08G0378.1,GhM_A08G0379.1,GhM_D01G2390.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G40890||AT2G40860 | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein||CYP98A3; CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3); monooxygenase/ p-coumarate 3-hydroxylase | GO:0005792|microsome;GO:0004672|protein kinase activity;GO:0003824|catalytic activity;GO:0004722|protein serine/threonine phosphatase activity;GO:0005739|mitochondrion;GO:0005783|endoplasmic reticulum;GO:0006468|protein amino acid phosphorylation;GO:0009809|lignin biosynthetic process;GO:0009813|flavonoid biosynthetic process;GO:0009699|phenylpropanoid biosynthetic process;GO:0009805|coumarin biosynthetic process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0046409|p-coumarate 3-hydroxylase activity;GO:0005524|ATP binding;GO:0004497|monooxygenase activity;GO:0004674|protein serine/threonine kinase activity | GhM_A01G2459.1,GhM_D01G2398.1,GhM_A13G0017.1,GhM_D13G0019.1,GhM_A13G0018.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G21200 | transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_A01G2465.1,GhM_D01G2403.1,GhM_A02G0748.1,GhM_D02G0744.1,GhM_Scaf150G299.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G54750 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2483.1,GhM_D01G2423.1,GhM_A04G0610.1,GhM_D04G1152.1,GhM_A04G0611.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G36270 | ABI5, GIA1; ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factor | GO:0006950|response to stress;GO:0009845|seed germination;GO:0016563|transcription activator activity;GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0043193|positive regulation of gene-specific transcription;GO:0048316|seed development;GO:0010182|sugar mediated signaling pathway;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0010187|negative regulation of seed germination | GhM_A01G2571.1,GhM_D09G1651.1,GhM_A01G2572.1,GhM_D01G2505.1,GhM_A09G1750.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G52820||AT3G52810 | ATPAP22, PAP22; PAP22 (PURPLE ACID PHOSPHATASE 22); acid phosphatase/ protein serine/threonine phosphatase||ATPAP21, PAP21; PAP21 (PURPLE ACID PHOSPHATASE 21); acid phosphatase/ protein serine/threonine phosphatase | GO:0012505|endomembrane system;GO:0004722|protein serine/threonine phosphatase activity;GO:0008150|biological_process;GO:0003993|acid phosphatase activity | GhM_A01G2576.1,GhM_D04G1266.1,GhM_A01G2577.1,GhM_A04G0786.1,GhM_D01G2508.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G03160 | ATP58IPK; ATP58IPK (ARABIDOPSIS HOMOLOG OF MAMALLIAN P58IPK); binding / heat shock protein binding | GO:0005488|binding;GO:0005783|endoplasmic reticulum;GO:0005788|endoplasmic reticulum lumen;GO:0006457|protein folding;GO:0005886|plasma membrane;GO:0031072|heat shock protein binding | GhM_A01G2663.1,GhM_D01G2593.1,GhM_A09G1880.1,GhM_D09G1776.1,GhM_Scaf001G017.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G09740 | SYP71, ATSYP71; SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | GO:0006612|protein targeting to membrane;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0008565|protein transporter activity | GhM_A01G2664.1,GhM_D01G2594.1,GhM_A04G0984.1,GhM_D04G1442.1,GhM_D03G1116.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G20280||AT3G54970 | zinc finger (CCCH-type) family protein||catalytic | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A01G2689.1,GhM_D01G2620.1,GhM_A05G4085.1,GhM_D04G0976.1,GhM_D04G0975.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G64625||AT2G27230 | LHW; LHW (LONESOME HIGHWAY); protein homodimerization/ transcription activator/ transcription factor||transcription factor | GO:0048364|root development;GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0042803|protein homodimerization activity;GO:0010479|stele development;GO:0003700|transcription factor activity;GO:0010078|maintenance of root meristem identity | GhM_A01G2738.1,GhM_D01G2666.1,GhM_A01G2739.1,GhM_D09G1814.1,GhM_A09G1916.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G74270||AT1G07070 | 60S ribosomal protein L35a (RPL35aC)||60S ribosomal protein L35a (RPL35aA) | GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A01G2769.1,GhM_D01G2696.1,GhM_A13G0210.1,GhM_D04G0785.1,GhM_D13G0197.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G09010 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A01G2819.1,GhM_D11G4023.1,GhM_A11G4132.1,GhM_D07G2381.1,GhM_D01G2742.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G37070||AT3G08890||AT5G01610 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G2835.1,GhM_D01G2760.1,GhM_A09G2060.1,GhM_D09G1965.1,GhM_Scaf001G038.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G44060 | late embryogenesis abundant family protein / LEA family protein | GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0009793|embryonic development ending in seed dormancy;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0009269|response to desiccation | GhM_A01G2862.1,GhM_D01G2789.1,GhM_A03G2819.1,GhM_A07G2986.1,GhM_A08G3234.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G28330 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0001.1,GhM_D02G0010.1,GhM_A02G2273.1,GhM_D04G0001.1,GhM_A12G0003.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G01950||AT1G06840 | leucine-rich repeat transmembrane protein kinase, putative||ATP binding / kinase/ protein serine/threonine kinase | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0018.1,GhM_D02G1206.1,GhM_A02G1015.1,GhM_D02G0027.1,GhM_D02G0028.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G08670 | unknown protein | GO:0006979|response to oxidative stress | GhM_A02G0022.1,GhM_D02G0032.1,GhM_D02G1203.1,GhM_A03G1171.1,GhM_D02G1204.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G21820 | binding / calmodulin binding | GO:0005488|binding;GO:0009507|chloroplast;GO:0005516|calmodulin binding | GhM_A02G0049.1,GhM_A06G1957.1,GhM_D06G1937.1,GhM_D10G0144.1,GhM_A10G0157.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G31810||AT5G16290 | acetolactate synthase small subunit, putative | GO:0009507|chloroplast;GO:0016597|amino acid binding;GO:0003984|acetolactate synthase activity;GO:0009082|branched chain family amino acid biosynthetic process | GhM_A02G0066.1,GhM_D02G0073.1,GhM_A10G1833.1,GhM_A13G0251.1,GhM_D13G0238.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G04790 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A02G0291.1,GhM_D02G0315.1,GhM_A10G1481.1,GhM_D10G1638.1,GhM_A10G1482.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05290 | PNC1; PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1); ADP transmembrane transporter/ ATP transmembrane transporter/ binding | GO:0005777|peroxisome;GO:0005347|ATP transmembrane transporter activity;GO:0015866|ADP transport;GO:0006810|transport;GO:0005488|binding;GO:0015217|ADP transmembrane transporter activity;GO:0006839|mitochondrial transport;GO:0006635|fatty acid beta-oxidation;GO:0005743|mitochondrial inner membrane;GO:0015867|ATP transport | GhM_A02G0330.1,GhM_D02G0352.1,GhM_D11G3241.1,GhM_A13G2326.1,GhM_D13G2214.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G43560 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0400.1,GhM_D02G0410.1,GhM_A10G1341.1,GhM_A09G2741.1,GhM_D09G2615.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G14465 | DNA-binding protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0408.1,GhM_D02G0416.1,GhM_D09G2621.1,GhM_A11G3160.1,GhM_D11G3084.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G23160 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A02G0409.1,GhM_D02G0417.1,GhM_A09G2754.1,GhM_D09G2626.1,GhM_D09G2625.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G33280||AT1G04570 | integral membrane transporter family protein | GO:0012505|endomembrane system;GO:0009507|chloroplast;GO:0006810|transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A02G0494.1,GhM_D02G0488.1,GhM_A02G0495.1,GhM_D09G2686.1,GhM_A09G2813.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05540 | INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Translationally controlled tumour protein (InterPro:IPR018105), Translationally controlled tumour-associated TCTP (InterPro:IPR001983), Mss4/translationally controlled tumour-associated TCTP (InterPro:IPR011323), Translationally controlled tumour protein, conserved site (InterPro:IPR018103), Mss4-like (InterPro:IPR011057); BEST Arabidopsis thaliana protein match is: TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIR:AT3G16640.1); Has 640 Blast hits to 640 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 343; Fungi - 110; Plants - 105; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005737|cytoplasm | GhM_A02G0559.1,GhM_D02G0545.1,GhM_A11G3364.1,GhM_D11G3277.1,GhM_A13G1496.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G16650||AT4G15900 | PRL1; PRL1 (PLEIOTROPIC REGULATORY LOCUS 1); basal transcription repressor/ nucleotide binding / protein binding||PP1/PP2A phosphatases pleiotropic regulator 2 (PRL2) | GO:0042742|defense response to bacterium;GO:0005515|protein binding;GO:0048364|root development;GO:0010204|defense response signaling pathway, resistance gene-independent;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0048825|cotyledon development;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0010154|fruit development;GO:0010182|sugar mediated signaling pathway;GO:0048366|leaf development;GO:0016481|negative regulation of transcription;GO:0006508|proteolysis;GO:0009755|hormone-mediated signaling pathway;GO:0050832|defense response to fungus;GO:0009749|response to glucose stimulus;GO:0017163|basal transcription repressor activity | GhM_A02G0561.1,GhM_D02G0548.1,GhM_A09G2898.1,GhM_D09G2761.1,GhM_D09G2760.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G34320 | unknown protein | GO:0005886|plasma membrane;GO:0006499|N-terminal protein myristoylation | GhM_A02G0707.1,GhM_D02G0705.1,GhM_A05G2804.1,GhM_D05G2805.1,GhM_D11G1819.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G34300 | lectin protein kinase family protein | GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0712.1,GhM_D02G0707.1,GhM_A08G0389.1,GhM_D10G1307.1,GhM_A10G2404.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G66530 | aldose 1-epimerase family protein | GO:0004034|aldose 1-epimerase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0006012|galactose metabolic process;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0030246|carbohydrate binding;GO:0016853|isomerase activity | GhM_A02G0716.1,GhM_D02G0710.1,GhM_D07G1260.1,GhM_D06G0715.1,GhM_D13G1940.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G77300 | EFS, SDG8, CCR1; EFS (EARLY FLOWERING IN SHORT DAYS); histone methyltransferase(H3-K36 specific) / histone methyltransferase(H3-K4 specific) | GO:0016116|carotenoid metabolic process;GO:0040029|regulation of gene expression, epigenetic;GO:0005634|nucleus;GO:0042800|histone methyltransferase activity (H3-K4 specific);GO:0031062|positive regulation of histone methylation;GO:0009910|negative regulation of flower development;GO:0010223|secondary shoot formation | GhM_A02G0838.1,GhM_D02G0828.1,GhM_A05G2662.1,GhM_D05G2672.1,GhM_A05G2661.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G21700 | ATSWI3C, CHB4; ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C); DNA binding | GO:0003677|DNA binding;GO:0006338|chromatin remodeling;GO:0016585|chromatin remodeling complex;GO:0016514|SWI/SNF complex | GhM_A02G0850.1,GhM_D02G0842.1,GhM_A05G3028.1,GhM_D05G3030.1,GhM_D06G1532.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G24610 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A02G0926.1,GhM_A05G2471.1,GhM_D05G2483.1,GhM_D02G0921.1,GhM_D02G0922.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G26780||AT4G37930 | SHM2; SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding||SHM1, STM, SHMT1; SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding | GO:0005747|mitochondrial respiratory chain complex I;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0016020|membrane;GO:0004372|glycine hydroxymethyltransferase activity;GO:0005886|plasma membrane;GO:0050897|cobalt ion binding;GO:0008270|zinc ion binding;GO:0006563|L-serine metabolic process;GO:0006544|glycine metabolic process | GhM_A02G0944.1,GhM_D02G0936.1,GhM_A02G1903.1,GhM_D11G2420.1,GhM_A11G2475.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G30390 | amino acid transporter family protein | GO:0006865|amino acid transport;GO:0015171|amino acid transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole | GhM_A02G0960.1,GhM_A06G0280.1,GhM_D06G0281.1,GhM_D02G0953.1,GhM_D02G0954.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G01395 | - | - | GhM_A02G1000.1,GhM_D02G1223.1,GhM_A06G1326.1,GhM_D06G1510.1,GhM_A06G1327.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G21140||AT1G51560 | FMN binding | GO:0009507|chloroplast;GO:0010181|FMN binding | GhM_A02G1002.1,GhM_D02G1221.1,GhM_A05G1263.1,GhM_D05G1280.1,GhM_A12G0681.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G24040 | ATTRE1, TRE1; TRE1 (TREHALASE 1); alpha,alpha-trehalase/ trehalase | GO:0005993|trehalose catabolic process;GO:0004555|alpha,alpha-trehalase activity;GO:0015927|trehalase activity | GhM_A02G1176.1,GhM_A11G0219.1,GhM_D11G0213.1,GhM_D03G1052.1,GhM_D03G1053.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G23740 | leucine-rich repeat transmembrane protein kinase, putative | GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G1274.1,GhM_D03G0968.1,GhM_A02G1275.1,GhM_D12G2988.1,GhM_A12G3100.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G20990 | DC1 domain-containing protein | GO:0009507|chloroplast | GhM_A02G1317.1,GhM_D03G0850.1,GhM_A11G3921.1,GhM_D11G3834.1,GhM_A12G0847.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1339.1,GhM_A06G1082.1,GhM_A12G0383.1,GhM_A08G1701.1,GhM_A08G1747.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1408.1,GhM_A07G1846.1,GhM_A04G0721.1,GhM_A08G1360.1,GhM_A08G0982.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G44020||AT4G02990 | mitochondrial transcription termination factor family protein / mTERF family protein||mitochondrial transcription termination factor-related / mTERF-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1420.1,GhM_D03G0883.1,GhM_A02G1421.1,GhM_D08G0837.1,GhM_A08G0888.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G07630||AT2G28890 | PLL4; PLL4 (POLTERGEIST LIKE 4); catalytic/ protein serine/threonine phosphatase||PLL5; PLL5; catalytic/ protein serine/threonine phosphatase | GO:0003824|catalytic activity;GO:0006499|N-terminal protein myristoylation;GO:0048366|leaf development;GO:0005886|plasma membrane;GO:0004722|protein serine/threonine phosphatase activity | GhM_A02G1431.1,GhM_A05G1052.1,GhM_A03G0585.1,GhM_D03G1537.1,GhM_D05G1063.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G65470 | FAS1, NFB2; FAS1 (FASCIATA 1); histone binding | GO:0005678|chromatin assembly complex;GO:0006334|nucleosome assembly;GO:0008283|cell proliferation;GO:0009555|pollen development;GO:0042393|histone binding;GO:0009934|regulation of meristem structural organization;GO:0045787|positive regulation of cell cycle;GO:0048366|leaf development;GO:0031507|heterochromatin formation;GO:0010026|trichome differentiation;GO:0006310|DNA recombination;GO:0006325|chromatin organization;GO:0000724|double-strand break repair via homologous recombination | GhM_A02G1464.1,GhM_D03G0691.1,GhM_A13G1163.1,GhM_D13G1096.1,GhM_D13G1097.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G36890 | BGLU42; BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0030245|cellulose catabolic process;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding;GO:0008422|beta-glucosidase activity | GhM_A02G1474.1,GhM_D11G3756.1,GhM_A11G3839.1,GhM_D03G0699.1,GhM_D03G0698.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G16380 | PAB6; PAB6 (POLY(A) BINDING PROTEIN 6); RNA binding / translation initiation factor | GO:0003723|RNA binding;GO:0006413|translational initiation;GO:0016071|mRNA metabolic process;GO:0003743|translation initiation factor activity | GhM_A02G1504.1,GhM_A13G2681.1,GhM_A10G2608.1,GhM_A06G2497.1,GhM_A05G4628.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G21310||AT2G25910||AT5G11730 | unknown protein||3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0006139|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0003674|molecular_function;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008408|3'-5' exonuclease activity;GO:0005575|cellular_component | GhM_A02G1523.1,GhM_D03G0638.1,GhM_A02G1524.1,GhM_A10G0699.1,GhM_D10G0678.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G15233||AT3G53480 | PDR9, ATPDR9, ABCG37; PDR9 (PLEIOTROPIC DRUG RESISTANCE 9); ATPase, coupled to transmembrane movement of substances||ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0006855|drug transmembrane transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | GhM_A02G1571.1,GhM_D03G0842.1,GhM_A02G1572.1,GhM_A10G2221.1,GhM_D10G2150.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G22440||AT1G32780||AT4G22110||AT1G77120 | ADH1, ADH, ATADH, ATADH1; ADH1 (ALCOHOL DEHYDROGENASE 1); alcohol dehydrogenase||alcohol dehydrogenase, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0046686|response to cadmium ion;GO:0055114|oxidation reduction;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A02G1667.1,GhM_A10G2749.1,GhM_D03G0605.1,GhM_D10G2678.1,GhM_D10G2679.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G22490||AT1G72210 | basic helix-loop-helix (bHLH) family protein||basic helix-loop-helix (bHLH) family protein (bHLH096) | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_A02G1712.1,GhM_D03G0429.1,GhM_A10G0983.1,GhM_D10G1097.1,GhM_A10G0984.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A02G1714.1,GhM_A10G0985.1,GhM_D10G1096.1,GhM_D03G0431.1,GhM_D03G0430.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G05400 | unknown protein | GO:0008150|biological_process;GO:0005507|copper ion binding;GO:0005575|cellular_component | GhM_A02G1806.1,GhM_D03G0533.1,GhM_A03G0598.1,GhM_D03G1526.1,GhM_D03G1527.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G39870 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TLDc (InterPro:IPR006571); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05590.2); Has 2018 Blast hits to 1865 proteins in 220 species: Archae - 0; Bacteria - 39; Metazoa - 1002; Fungi - 279; Plants - 129; Viruses - 34; Other Eukaryotes - 535 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G1869.1,GhM_D03G0391.1,GhM_A12G0945.1,GhM_D12G0845.1,GhM_A12G0944.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G67270||AT3G47690||AT5G62500 | ATEB1B, ATEB1, EB1B; ATEB1B (END BINDING PROTEIN 1B); microtubule binding||ATEB1A, EB1A, ATEB1H2; ATEB1A; microtubule binding||ATEB1C, EB1C, ATEB1H1; ATEB1C (microtubule end binding protein 1); microtubule binding | GO:0005819|spindle;GO:0005634|nucleus;GO:0008017|microtubule binding;GO:0030865|cortical cytoskeleton organization;GO:0010005|cortical microtubule, transverse to long axis;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0005876|spindle microtubule;GO:0005618|cell wall;GO:0005815|microtubule organizing center;GO:0009574|preprophase band;GO:0009958|positive gravitropism;GO:0005874|microtubule;GO:0009652|thigmotropism | GhM_A02G1998.1,GhM_D03G0269.1,GhM_D12G1068.1,GhM_A03G0883.1,GhM_D03G1117.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G37180 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | GhM_A02G2048.1,GhM_D03G0213.1,GhM_D11G2727.1,GhM_A12G0810.1,GhM_D12G0792.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G37210 | tetratricopeptide repeat (TPR)-containing protein | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A02G2071.1,GhM_D03G0190.1,GhM_A11G0551.1,GhM_D11G0543.1,GhM_A12G0422.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G17787 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G2195.1,GhM_D03G0076.1,GhM_D12G1475.1,GhM_D12G2325.1,GhM_A12G2433.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G17550 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G2253.1,GhM_D03G0019.1,GhM_A07G2175.1,GhM_D07G2112.1,GhM_A07G2174.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G17140 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: phosphoinositide binding (TAIR:AT1G48090.2); Has 1924 Blast hits to 1182 proteins in 161 species: Archae - 0; Bacteria - 16; Metazoa - 911; Fungi - 304; Plants - 271; Viruses - 0; Other Eukaryotes - 422 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A03G0096.1,GhM_D03G2004.1,GhM_A08G2129.1,GhM_D08G2084.1,GhM_A08G2130.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G63100||AT3G50650 | scarecrow transcription factor family protein||scarecrow-like transcription factor 7 (SCL7) | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A03G0251.1,GhM_D03G1863.1,GhM_A12G2806.1,GhM_D12G2694.1,GhM_D08G2287.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G00490||AT2G45880 | BAM2, BMY9; BAM2 (BETA-AMYLASE 2); beta-amylase||BMY4, BAM7; BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding | GO:0016161|beta-amylase activity;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding;GO:0000272|polysaccharide catabolic process;GO:0030244|cellulose biosynthetic process;GO:0005575|cellular_component | GhM_A03G0279.1,GhM_A11G1028.1,GhM_A08G1783.1,GhM_D08G1739.1,GhM_D11G1038.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G23460 | beta-adaptin, putative | GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0030276|clathrin binding;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0008565|protein transporter activity | GhM_A03G0311.1,GhM_D03G1813.1,GhM_A08G2398.1,GhM_D08G2342.1,GhM_A08G2399.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00360 | YCF3; Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I. | GO:0051082|unfolded protein binding;GO:0009507|chloroplast;GO:0048564|photosystem I assembly | GhM_A03G0315.1,GhM_A10G1142.1,GhM_A07G2069.1,GhM_A08G0514.1,GhM_D02G1107.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G16030 | methyltransferase | GO:0012505|endomembrane system;GO:0008168|methyltransferase activity;GO:0008152|metabolic process | GhM_A03G0420.1,GhM_D03G1708.1,GhM_D05G2733.1,GhM_A05G2735.1,GhM_D11G0924.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G22950 | VPS24.1; VPS24.1 | GO:0016192|vesicle-mediated transport;GO:0000815|ESCRT III complex | GhM_A03G0428.1,GhM_D03G1699.1,GhM_A10G2567.1,GhM_D04G0075.1,GhM_D10G2481.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G28060 | protein kinase-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0445.1,GhM_D03G1684.1,GhM_A08G2583.1,GhM_D08G2524.1,GhM_D13G2869.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G45780 | PHOT1, NPH1, JK224, RPT1; PHOT1 (PHOTOTROPIN 1); FMN binding / blue light photoreceptor/ kinase/ protein binding / protein serine/threonine kinase | GO:0005773|vacuole | GhM_A03G0500.1,GhM_D03G1629.1,GhM_A05G1098.1,GhM_D05G1112.1,GhM_D05G1113.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G55350 | unknown protein | GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0003674|molecular_function | GhM_A03G0541.1,GhM_D07G1140.1,GhM_A05G1075.1,GhM_D05G1089.1,GhM_A07G1159.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G59410 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rab5-interacting (InterPro:IPR010742); BEST Arabidopsis thaliana protein match is: Rab5-interacting family protein (TAIR:AT2G29020.1); Has 154 Blast hits to 154 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0606.1,GhM_A05G1043.1,GhM_D05G1054.1,GhM_A07G1196.1,GhM_D03G1514.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53560 | ATB5-A, B5 #2, ATCB5-E, CB5-E; CB5-E (CYTOCHROME B5 ISOFORM E); heme binding | GO:0005789|endoplasmic reticulum membrane;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0009535|chloroplast thylakoid membrane;GO:0005773|vacuole | GhM_A03G0694.1,GhM_D03G1416.1,GhM_D02G2538.1,GhM_A12G3045.1,GhM_D12G2928.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53020 | unknown protein | GO:0008150|biological_process | GhM_A03G0709.1,GhM_D03G1400.1,GhM_A12G3065.1,GhM_D12G2949.1,GhM_A12G3066.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G24910 | unknown protein | GO:0009507|chloroplast | GhM_A03G0717.1,GhM_D03G1392.1,GhM_D07G0618.1,GhM_A11G0455.1,GhM_D11G0436.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G61450 | 2-phosphoglycerate kinase-related | GO:0009507|chloroplast | GhM_A03G0802.1,GhM_D03G1296.1,GhM_A12G2512.1,GhM_D12G2395.1,GhM_Scaf057G209.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G51380 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G0803.1,GhM_D03G1295.1,GhM_A12G2511.1,GhM_D12G2394.1,GhM_Scaf057G208.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G07475 | plastocyanin-like domain-containing protein | GO:0031225|anchored to membrane | GhM_A03G0818.1,GhM_D03G1284.1,GhM_A09G3024.1,GhM_D09G2885.1,GhM_D13G0003.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00540 | PETA; Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A03G0922.1,GhM_Scaf146G295.1,GhM_D02G0864.1,GhM_D10G2496.1,GhM_D03G1467.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG01000||AT2G07739 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00370.1); Has 357 Blast hits to 357 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 357; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||YCF1.1; hypothetical protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G0971.1,GhM_D13G1529.1,GhM_A11G0676.1,GhM_D03G0924.1,GhM_D13G0996.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A03G0990.1,GhM_A03G1599.1,GhM_A11G2272.1,GhM_A04G1748.1,GhM_A07G2246.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G80930 | MIF4G domain-containing protein / MA3 domain-containing protein | GO:0005515|protein binding;GO:0016070|RNA metabolic process;GO:0003723|RNA binding;GO:0005488|binding;GO:0005634|nucleus;GO:0005829|cytosol;GO:0006412|translation | GhM_A03G1135.1,GhM_D10G1164.1,GhM_A10G0753.1,GhM_D02G1256.1,GhM_D10G1165.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G20930 | 3-hydroxyisobutyrate dehydrogenase, putative | GO:0008152|metabolic process;GO:0006574|valine catabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0004616|phosphogluconate dehydrogenase (decarboxylating) activity;GO:0050662|coenzyme binding;GO:0006098|pentose-phosphate shunt;GO:0051287|NAD or NADH binding;GO:0006573|valine metabolic process;GO:0008442|3-hydroxyisobutyrate dehydrogenase activity;GO:0016491|oxidoreductase activity | GhM_A03G1141.1,GhM_D02G1188.1,GhM_A03G1142.1,GhM_A07G2649.1,GhM_A04G1165.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00150 | ATPI; Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex. | GO:0009507|chloroplast | GhM_A03G1147.1,GhM_Scaf220G349.1,GhM_A05G0942.1,GhM_A09G0435.1,GhM_D02G1034.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00890 | NDHB.1; NADH dehydrogenase ND2 | GO:0012505|endomembrane system;GO:0042773|ATP synthesis coupled electron transport;GO:0008137|NADH dehydrogenase (ubiquinone) activity | GhM_A03G1153.1,GhM_Scaf289G389.1,GhM_D02G1698.1,GhM_A04G0644.1,GhM_D01G2333.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G44900 | MCM2; ATP binding / DNA binding / DNA-dependent ATPase | GO:0048364|root development;GO:0008094|DNA-dependent ATPase activity;GO:0006268|DNA unwinding involved in replication;GO:0042127|regulation of cell proliferation;GO:0003677|DNA binding;GO:0010082|regulation of root meristem growth;GO:0000790|nuclear chromatin;GO:0008283|cell proliferation;GO:0006270|DNA replication initiation;GO:0005524|ATP binding;GO:0009790|embryonic development | GhM_A03G1161.1,GhM_D09G0032.1,GhM_A09G0037.1,GhM_D02G1197.1,GhM_D02G1198.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G13260||AT1G25560||AT1G68840 | TEM1; TEM1 (TEMPRANILLO 1); transcription factor||RAV2, RAP2.8, TEM2; RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE); DNA binding / transcription factor/ transcription repressor||RAV1; RAV1; DNA binding / transcription factor/ transcription repressor | GO:0009873|ethylene mediated signaling pathway;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0009741|response to brassinosteroid stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0048366|leaf development;GO:0009910|negative regulation of flower development;GO:0048527|lateral root development;GO:0016564|transcription repressor activity;GO:0048573|photoperiodism, flowering | GhM_A03G1301.1,GhM_D02G1349.1,GhM_A13G0591.1,GhM_D13G0773.1,GhM_D12G2082.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G10350 | anion-transporting ATPase family protein | GO:0006875|cellular metal ion homeostasis;GO:0006820|anion transport;GO:0009507|chloroplast;GO:0009570|chloroplast stroma;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A03G1406.1,GhM_A13G2186.1,GhM_A03G1407.1,GhM_A04G0659.1,GhM_A09G0916.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00430 | PSBG; Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | GO:0051539|4 iron, 4 sulfur cluster binding;GO:0009507|chloroplast;GO:0008137|NADH dehydrogenase (ubiquinone) activity;GO:0016651|oxidoreductase activity, acting on NADH or NADPH | GhM_A03G1412.1,GhM_Scaf286G387.1,GhM_A04G0440.1,GhM_A06G1795.1,GhM_A12G1999.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G03800 | GEK1; GEK1 (GEKO1); D-aminoacyl-tRNA deacylase | GO:0051499|D-aminoacyl-tRNA deacylase activity;GO:0009636|response to toxin | GhM_A03G1426.1,GhM_D02G1553.1,GhM_A04G1232.1,GhM_A08G1293.1,GhM_A07G2870.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G08080||AT3G03800 | SYP132, ATSYP132; SYP132 (SYNTAXIN OF PLANTS 132); SNAP receptor||SYP131, ATSYP131; SYP131 (SYNTAXIN OF PLANTS 131); SNAP receptor | GO:0005886|plasma membrane;GO:0006944|cellular membrane fusion;GO:0006886|intracellular protein transport;GO:0005484|SNAP receptor activity | GhM_A03G1469.1,GhM_D02G1587.1,GhM_A13G1244.1,GhM_D13G1008.1,GhM_D13G1009.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G27990 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G1554.1,GhM_D02G1739.1,GhM_A04G1856.1,GhM_Scaf119G276.1,GhM_D04G2327.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G21105 | cytochrome-c oxidase/ electron carrier | GO:0005739|mitochondrion | GhM_A03G1570.1,GhM_D08G0081.1,GhM_A05G0919.1,GhM_D05G0938.1,GhM_A08G0098.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G02090 | CHR19, CHA19, ETL1; ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding | GO:0009507|chloroplast;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A03G1584.1,GhM_D02G1649.1,GhM_A12G1988.1,GhM_D12G1899.1,GhM_D12G1898.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G24480||AT4G24805 | methyltransferase | GO:0012505|endomembrane system;GO:0008168|methyltransferase activity;GO:0008152|metabolic process | GhM_A03G1770.1,GhM_D02G1851.1,GhM_A04G1802.1,GhM_D04G2276.1,GhM_D12G2277.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G70570 | anthranilate phosphoribosyltransferase, putative | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009507|chloroplast;GO:0008152|metabolic process | GhM_A03G1851.1,GhM_D02G1910.1,GhM_A03G1852.1,GhM_A04G1789.1,GhM_D04G2263.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G24030 | protein kinase family protein | GO:0004713|protein tyrosine kinase activity | GhM_A03G1914.1,GhM_D02G1967.1,GhM_A04G1772.1,GhM_D04G2248.1,GhM_D01G1625.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G05670 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | GhM_A03G1964.1,GhM_D11G0004.1,GhM_D02G2003.1,GhM_A08G3236.1,GhM_D06G0001.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G01210||AT1G25320 | leucine-rich repeat transmembrane protein kinase, putative | GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0009570|chloroplast stroma;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A03G2008.1,GhM_D02G2043.1,GhM_A05G3790.1,GhM_D05G3755.1,GhM_D05G3756.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G36160||AT2G20610||AT5G53970 | SUR1, HLS3, RTY, ALF1, RTY1; SUR1 (SUPERROOT 1); S-alkylthiohydroximate lyase/ carbon-sulfur lyase/ transaminase||aminotransferase, putative||aminotransferase-related | GO:0048830|adventitious root development;GO:0010189|vitamin E biosynthetic process;GO:0004838|L-tyrosine:2-oxoglutarate aminotransferase activity;GO:0003824|catalytic activity;GO:0006519|cellular amino acid and derivative metabolic process;GO:0019761|glucosinolate biosynthetic process;GO:0016769|transferase activity, transferring nitrogenous groups;GO:0009058|biosynthetic process;GO:0030170|pyridoxal phosphate binding;GO:0019446|tyrosine catabolic process to phosphoenolpyruvate;GO:0001560|regulation of cell growth by extracellular stimulus;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0009684|indoleacetic acid biosynthetic process;GO:0016020|membrane;GO:0005575|cellular_component;GO:0016846|carbon-sulfur lyase activity;GO:0008483|transaminase activity | GhM_A03G2084.1,GhM_D02G2110.1,GhM_D02G2109.1,GhM_D13G0740.1,GhM_A13G0624.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G26760 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G2091.1,GhM_D02G2117.1,GhM_A08G2608.1,GhM_D08G2552.1,GhM_A08G2610.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G20680 | glycosyl hydrolase family 5 protein / cellulase family protein | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | GhM_A03G2097.1,GhM_D02G2122.1,GhM_A13G0628.1,GhM_D13G0738.1,GhM_A13G0627.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G64330 | NPH3, RPT3, JK218; NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3); protein binding / signal transducer | GO:0005515|protein binding;GO:0009638|phototropism;GO:0004871|signal transducer activity;GO:0009416|response to light stimulus;GO:0005886|plasma membrane | GhM_A03G2329.1,GhM_D02G2361.1,GhM_A03G2330.1,GhM_D13G0566.1,GhM_A13G0837.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G34230||AT3G19450 | CAD4, ATCAD4, CAD, CAD-C; ATCAD4; cinnamyl-alcohol dehydrogenase||CAD5, ATCAD5, CAD-5; ATCAD5 (CINNAMYL ALCOHOL DEHYDROGENASE 5); cinnamyl-alcohol dehydrogenase | GO:0009809|lignin biosynthetic process;GO:0005575|cellular_component;GO:0045551|cinnamyl-alcohol dehydrogenase activity | GhM_A03G2448.1,GhM_A12G0237.1,GhM_D12G0245.1,GhM_D02G2470.1,GhM_D02G2471.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G34430 | CHB3, ATSWI3D; CHB3; DNA binding / transcription factor/ zinc ion binding | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0008270|zinc ion binding | GhM_A03G2532.1,GhM_D02G2557.1,GhM_A04G1594.1,GhM_D04G2072.1,GhM_A04G1627.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G16700 | NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial, putative | GO:0046872|metal ion binding;GO:0008137|NADH dehydrogenase (ubiquinone) activity;GO:0045271|respiratory chain complex I;GO:0005739|mitochondrion | GhM_A03G2541.1,GhM_D02G2568.1,GhM_A12G0311.1,GhM_A13G0382.1,GhM_D13G0368.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G77700||AT5G24690 | pathogenesis-related thaumatin family protein||INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: RER1 (RETICULATA-RELATED 1) (TAIR:AT5G22790.1); Has 251 Blast hits to 242 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 20; Fungi - 4; Plants - 172; Viruses - 3; Other Eukaryotes - 44 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009536|plastid;GO:0005739|mitochondrion;GO:0009706|chloroplast inner membrane;GO:0005575|cellular_component;GO:0051707|response to other organism | GhM_A03G2720.1,GhM_D12G0443.1,GhM_A03G2721.1,GhM_D02G2738.1,GhM_A12G0351.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G35180 | phosphoinositide binding | GO:0005886|plasma membrane;GO:0007165|signal transduction;GO:0035091|phosphoinositide binding | GhM_A03G2764.1,GhM_A05G0542.1,GhM_D05G0568.1,GhM_A07G0325.1,GhM_D07G0323.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G57680 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031277 (InterPro:IPR016971); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A03G2789.1,GhM_D02G2795.1,GhM_A04G1762.1,GhM_D04G2239.1,GhM_D01G1663.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G21120 | AAT1, CAT1; AAT1 (AMINO ACID TRANSPORTER 1); L-glutamate transmembrane transporter/ L-lysine transmembrane transporter/ arginine transmembrane transporter/ cationic amino acid transmembrane transporter | GO:0015189|L-lysine transmembrane transporter activity;GO:0015802|basic amino acid transport;GO:0005313|L-glutamate transmembrane transporter activity;GO:0015326|cationic amino acid transmembrane transporter activity;GO:0051938|L-glutamate import;GO:0043091|L-arginine import;GO:0015181|arginine transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A03G2793.1,GhM_D02G2799.1,GhM_A04G1767.1,GhM_D04G2243.1,GhM_D02G2809.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G30450 | CCC1, ATCCC1, HAP5; CCC1 (CATION-CHLORIDE CO-TRANSPORTER 1); cation:chloride symporter/ sodium:potassium:chloride symporter | GO:0006810|transport;GO:0006821|chloride transport;GO:0015377|cation:chloride symporter activity;GO:0006814|sodium ion transport;GO:0008511|sodium:potassium:chloride symporter activity;GO:0006812|cation transport;GO:0005886|plasma membrane | GhM_A03G2794.1,GhM_D02G2800.1,GhM_A12G0503.1,GhM_D12G0495.1,GhM_D02G2810.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G31120 | KUP10; KUP10; potassium ion transmembrane transporter | GO:0006813|potassium ion transport;GO:0016020|membrane;GO:0015079|potassium ion transmembrane transporter activity | GhM_A03G2807.1,GhM_A12G0528.1,GhM_D12G0522.1,GhM_D02G2815.1,GhM_D02G2816.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G31070||AT2G35020 | UTP--glucose-1-phosphate uridylyltransferase family protein||UDP-N-acetylglucosamine pyrophosphorylase-related | GO:0008152|metabolic process;GO:0016779|nucleotidyltransferase activity;GO:0019277|UDP-N-acetylgalactosamine biosynthetic process;GO:0005886|plasma membrane;GO:0005575|cellular_component | GhM_A03G2812.1,GhM_D12G0530.1,GhM_A12G0537.1,GhM_D02G2821.1,GhM_D02G2820.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A04G0002.1,GhM_D01G0006.1,GhM_D10G2990.1,GhM_D02G0005.1,GhM_D13G1042.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G59840 | unknown protein | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A04G0007.1,GhM_A08G2110.1,GhM_D08G2063.1,GhM_A12G2653.1,GhM_D12G2543.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A04G0088.1,GhM_A09G0727.1,GhM_A11G1912.1,GhM_A05G4060.1,GhM_A11G3624.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G15210 | ATERF-4, ERF4, RAP2.5, ATERF4; ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4); DNA binding / protein binding / transcription factor/ transcription repressor | GO:0005515|protein binding;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0016604|nuclear body;GO:0016564|transcription repressor activity;GO:0009723|response to ethylene stimulus;GO:0009864|induced systemic resistance, jasmonic acid mediated signaling pathway | GhM_A04G0363.1,GhM_D05G4007.1,GhM_A13G1972.1,GhM_D13G1871.1,GhM_D01G0609.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G30440||AT1G06870 | chloroplast thylakoidal processing peptidase||signal peptidase, putative | GO:0008233|peptidase activity;GO:0009534|chloroplast thylakoid;GO:0008236|serine-type peptidase activity;GO:0006465|signal peptide processing;GO:0006508|proteolysis;GO:0016020|membrane | GhM_A04G0437.1,GhM_D06G0160.1,GhM_A05G2230.1,GhM_D05G2249.1,GhM_A06G0157.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G54830 | DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0004500|dopamine beta-monooxygenase activity;GO:0006548|histidine catabolic process;GO:0004497|monooxygenase activity | GhM_A04G0448.1,GhM_D05G3927.1,GhM_A11G3650.1,GhM_D11G3559.1,GhM_A11G3649.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G14440 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Surfeit locus 2 (InterPro:IPR008833); BEST Arabidopsis thaliana protein match is: surfeit locus protein 2 family protein / SURF2 family protein (TAIR:AT5G40570.1); Has 6533 Blast hits to 4299 proteins in 259 species: Archae - 4; Bacteria - 127; Metazoa - 2727; Fungi - 698; Plants - 260; Viruses - 77; Other Eukaryotes - 2640 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G0512.1,GhM_A10G1172.1,GhM_A05G3515.1,GhM_D05G3465.1,GhM_D10G0925.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G16280 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_A04G0593.1,GhM_D04G1137.1,GhM_A04G0594.1,GhM_A11G3969.1,GhM_D11G3873.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G58060 | cation efflux family protein / metal tolerance protein, putative (MTPc3) | GO:0016020|membrane;GO:0006812|cation transport;GO:0015562|efflux transmembrane transporter activity;GO:0008324|cation transmembrane transporter activity | GhM_A04G0647.1,GhM_D04G1182.1,GhM_A04G0648.1,GhM_A13G2766.1,GhM_D13G2659.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A04G0696.1,GhM_A05G0040.1,GhM_D05G4255.1,GhM_D01G1709.1,GhM_D03G0923.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G22350 | ELM1; ELM1 (ELONGATED MITOCHONDRIA 1) | GO:0000266|mitochondrial fission;GO:0033365|protein localization in organelle;GO:0005741|mitochondrial outer membrane | GhM_A04G0742.1,GhM_D04G1187.1,GhM_A07G1338.1,GhM_D07G1316.1,GhM_D12G1764.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G11600||AT5G06270 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A04G0765.1,GhM_D04G1109.1,GhM_A09G1711.1,GhM_D09G1612.1,GhM_D01G1575.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G53110 | LOS4; LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4); ATP-dependent helicase/ RNA helicase/ RNA-dependent ATPase | GO:0008186|RNA-dependent ATPase activity;GO:0016973|poly(A)+ mRNA export from nucleus;GO:0009737|response to abscisic acid stimulus;GO:0005737|cytoplasm;GO:0009408|response to heat;GO:0003724|RNA helicase activity;GO:0008026|ATP-dependent helicase activity;GO:0005886|plasma membrane;GO:0005635|nuclear envelope;GO:0009409|response to cold | GhM_A04G0897.1,GhM_D04G1350.1,GhM_A10G2969.1,GhM_D10G2918.1,GhM_D07G0098.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G03250 | phototropic-responsive NPH3 family protein | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0004871|signal transducer activity | GhM_A04G0972.1,GhM_D04G1429.1,GhM_A04G0973.1,GhM_A13G0286.1,GhM_D13G0273.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G09560 | lipin family protein | GO:0008195|phosphatidate phosphatase activity;GO:0016036|cellular response to phosphate starvation;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | GhM_A04G1029.1,GhM_D04G1480.1,GhM_A13G1285.1,GhM_D09G1878.1,GhM_A09G1980.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G37840 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A04G1117.1,GhM_D04G1583.1,GhM_A13G1069.1,GhM_D13G1149.1,GhM_D12G1037.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G05830 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A04G1134.1,GhM_D04G1599.1,GhM_A07G0136.1,GhM_A09G2007.1,GhM_D09G1907.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G05620 | URH2; URH2 (URIDINE-RIBOHYDROLASE 2); hydrolase | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0035251|UDP-glucosyltransferase activity | GhM_A04G1251.1,GhM_D04G1732.1,GhM_A07G2035.1,GhM_A13G1902.1,GhM_A06G1781.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18640 | PSP; PSP (3-PHOSPHOSERINE PHOSPHATASE); phosphoserine phosphatase | GO:0009507|chloroplast;GO:0004647|phosphoserine phosphatase activity;GO:0006564|L-serine biosynthetic process | GhM_A04G1381.1,GhM_A07G0820.1,GhM_D07G0820.1,GhM_A07G2217.1,GhM_A11G2424.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G50120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 110 Blast hits to 108 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 76; Fungi - 10; Plants - 20; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G1390.1,GhM_D04G1879.1,GhM_A12G1738.1,GhM_D12G1686.1,GhM_A12G1739.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G23190 | CYP86B1; CYP86B1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0010345|suberin biosynthetic process;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0042761|very-long-chain fatty acid biosynthetic process;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | GhM_A04G1392.1,GhM_D04G1881.1,GhM_A13G0696.1,GhM_D13G0675.1,GhM_D13G0676.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G15430 | RBP36A, RPB35.5A, NRPB3, NRPD3, NRPE3A; NRPB3; DNA binding / DNA-directed RNA polymerase/ protein dimerization | GO:0005665|DNA-directed RNA polymerase II, core complex;GO:0005634|nucleus;GO:0000418|DNA-directed RNA polymerase IV complex;GO:0003899|DNA-directed RNA polymerase activity;GO:0005737|cytoplasm;GO:0003677|DNA binding;GO:0046983|protein dimerization activity;GO:0005730|nucleolus;GO:0006350|transcription | GhM_A04G1563.1,GhM_D04G2040.1,GhM_A08G1523.1,GhM_D12G0253.1,GhM_A12G0245.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G50830 | COR413-PM2, ATCOR413-PM2; COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2) | GO:0006950|response to stress;GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A04G1692.1,GhM_D04G2170.1,GhM_A11G0550.1,GhM_A12G0331.1,GhM_D12G0465.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G08391 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A04G1712.1,GhM_A12G0690.1,GhM_A04G1833.1,GhM_D04G2309.1,GhM_D12G1867.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G32490 | EMB2733, ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding | GO:0012505|endomembrane system;GO:0004004|ATP-dependent RNA helicase activity;GO:0008380|RNA splicing;GO:0009793|embryonic development ending in seed dormancy;GO:0003676|nucleic acid binding;GO:0035194|posttranscriptional gene silencing by RNA;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A04G1830.1,GhM_D04G2307.1,GhM_A04G1831.1,GhM_A12G2313.1,GhM_D12G2203.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53090||AT4G27760 | binding / catalytic/ oxidoreductase||FEY, FEY3; FEY (FOREVER YOUNG); binding / catalytic/ oxidoreductase | GO:0005488|binding;GO:0008152|metabolic process;GO:0003824|catalytic activity | GhM_A04G1855.1,GhM_D04G2326.1,GhM_A07G1466.1,GhM_D07G1443.1,GhM_A07G1467.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G10120 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0002.1,GhM_A07G1645.1,GhM_D09G1647.1,GhM_A09G1755.1,GhM_A11G0040.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G30240 | protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0048193|Golgi vesicle transport;GO:0016020|membrane | GhM_A05G0055.1,GhM_D05G0055.1,GhM_D05G0054.1,GhM_A08G0321.1,GhM_D08G0304.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G57710 | heat shock protein-related | GO:0005515|protein binding | GhM_A05G0078.1,GhM_D05G0082.1,GhM_A08G3033.1,GhM_D08G2965.1,GhM_A08G3034.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G25660 | emb2410; emb2410 (embryo defective 2410) | GO:0009793|embryonic development ending in seed dormancy;GO:0003674|molecular_function | GhM_A05G0120.1,GhM_D05G0125.1,GhM_A06G0555.1,GhM_D06G0564.1,GhM_A13G1423.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G80520||AT2G12462 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Sterile alpha motif homology (InterPro:IPR010993); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15760.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0140.1,GhM_D05G0148.1,GhM_A08G1170.1,GhM_A06G0599.1,GhM_D08G1138.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G20150||AT2G26660 | ATSPX1, SPX1; SPX1 (SPX DOMAIN GENE 1)||ATSPX2, SPX2; SPX2 (SPX DOMAIN GENE 2) | GO:0005634|nucleus;GO:0016036|cellular response to phosphate starvation;GO:0003674|molecular_function | GhM_A05G0175.1,GhM_D05G0185.1,GhM_A07G0453.1,GhM_D07G0450.1,GhM_D07G0451.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G26695 | binding / zinc ion binding | GO:0008150|biological_process;GO:0005488|binding | GhM_A05G0192.1,GhM_D05G0201.1,GhM_A06G0676.1,GhM_D06G0680.1,GhM_A13G2612.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G13370 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0229.1,GhM_D05G0235.1,GhM_A07G0043.1,GhM_D07G0048.1,GhM_D06G1401.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G19880 | ceramide glucosyltransferase, putative | GO:0012505|endomembrane system;GO:0008120|ceramide glucosyltransferase activity;GO:0008150|biological_process | GhM_A05G0278.1,GhM_D05G0288.1,GhM_A06G0797.1,GhM_Scaf137G290.1,GhM_D06G0800.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G19750 | 40S ribosomal protein S30 (RPS30A) | GO:0022627|cytosolic small ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome | GhM_A05G0297.1,GhM_A10G0700.1,GhM_D05G0313.1,GhM_D10G0679.1,GhM_D13G2473.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G42830||AT5G20570 | ring-box protein Roc1/Rbx1/Hrt1, putative||ROC1, RBX1, HRT1, ATRBX1; RBX1 (RING-BOX 1); protein binding | GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0009733|response to auxin stimulus;GO:0000151|ubiquitin ligase complex;GO:0031463|Cul3-RING ubiquitin ligase complex;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination | GhM_A05G0370.1,GhM_A07G0176.1,GhM_D07G0176.1,GhM_A08G3155.1,GhM_D08G3080.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G20885||AT3G43430 | zinc finger (C3HC4-type RING finger) family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_A05G0405.1,GhM_D05G0423.1,GhM_A08G3165.1,GhM_D08G3090.1,GhM_A10G0009.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G32720 | AtLa1; AtLa1 (Arabidopsis thaliana La protein 1); RNA binding | GO:0003723|RNA binding;GO:0005618|cell wall;GO:0009790|embryonic development;GO:0042254|ribosome biogenesis;GO:0005654|nucleoplasm | GhM_A05G0529.1,GhM_D05G0548.1,GhM_D01G1842.1,GhM_D10G1306.1,GhM_D04G1121.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G25590 | INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52320.4); Has 31848 Blast hits to 18905 proteins in 762 species: Archae - 79; Bacteria - 761; Metazoa - 15943; Fungi - 3494; Plants - 1748; Viruses - 431; Other Eukaryotes - 9392 (source: NCBI BLink). | GO:0006499|N-terminal protein myristoylation | GhM_A05G0536.1,GhM_D05G0562.1,GhM_A06G1139.1,GhM_D06G1166.1,GhM_D06G1167.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G31910 | transferase family protein | GO:0008150|biological_process;GO:0005634|nucleus;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0016740|transferase activity | GhM_A05G0637.1,GhM_D05G0654.1,GhM_A13G2411.1,GhM_D13G2312.1,GhM_D09G0520.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G19620 | OEP80, ATOEP80, TOC75; OEP80 (OUTER ENVELOPE PROTEIN OF 80 KDA) | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009536|plastid;GO:0009793|embryonic development ending in seed dormancy;GO:0005739|mitochondrion;GO:0016020|membrane | GhM_A05G0749.1,GhM_D05G0773.1,GhM_A08G0194.1,GhM_D08G0184.1,GhM_A08G2125.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G21090||AT1G51460 | ABC transporter family protein | GO:0016020|membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport | GhM_A05G0765.1,GhM_D05G0788.1,GhM_A09G1450.1,GhM_D09G1356.1,GhM_A09G1451.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A05G0767.1,GhM_D09G1353.1,GhM_A09G1446.1,GhM_D05G0791.1,GhM_D05G0790.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G60450 | ARF4; ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor | GO:0010050|vegetative phase change;GO:0005634|nucleus;GO:0010158|abaxial cell fate specification;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity | GhM_A05G0821.1,GhM_D05G0843.1,GhM_D09G1290.1,GhM_A09G1372.1,GhM_A09G1373.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G44330 | INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-HAND 1 (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 192 Blast hits to 192 proteins in 79 species: Archae - 6; Bacteria - 5; Metazoa - 124; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | GO:0005739|mitochondrion;GO:0005783|endoplasmic reticulum;GO:0005886|plasma membrane;GO:0005773|vacuole;GO:0016485|protein processing | GhM_A05G0883.1,GhM_D05G0901.1,GhM_A09G1281.1,GhM_D09G1215.1,GhM_D12G0252.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G44530 | HIRA; HIRA (Arabidopsis homolog of histone chaperone HIRA); nucleotide binding / protein binding | GO:0005634|nucleus;GO:0005515|protein binding;GO:0045814|negative regulation of gene expression, epigenetic;GO:0000166|nucleotide binding | GhM_A05G0909.1,GhM_D05G0927.1,GhM_A08G0102.1,GhM_A06G2131.1,GhM_D08G0088.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G22580||AT5G22540 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Stress responsive alpha-beta barrel (InterPro:IPR013097), Dimeric alpha-beta barrel (InterPro:IPR011008); BEST Arabidopsis thaliana protein match is: HS1 (HEAT STABLE PROTEIN 1) (TAIR:AT3G17210.1); Has 231 Blast hits to 231 proteins in 57 species: Archae - 0; Bacteria - 89; Metazoa - 0; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G0923.1,GhM_D05G0942.1,GhM_A08G0095.1,GhM_D08G0079.1,GhM_A08G0096.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G44750||AT5G03740 | HD2A, ATHD2A, HDA3, HDT1; HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding||HD2C, HDT3; HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding | GO:0009944|polarity specification of adaxial/abaxial axis;GO:0004407|histone deacetylase activity;GO:0009737|response to abscisic acid stimulus;GO:0009294|DNA mediated transformation;GO:0005730|nucleolus;GO:0003676|nucleic acid binding;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0016564|transcription repressor activity;GO:0008270|zinc ion binding | GhM_A05G0929.1,GhM_D05G0949.1,GhM_A07G2426.1,GhM_A09G1232.1,GhM_D09G1163.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G20280 | TAF11; TAF11 (TBP-ASSOCIATED FACTOR 11); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor | GO:0005634|nucleus;GO:0006367|transcription initiation from RNA polymerase II promoter;GO:0003677|DNA binding;GO:0006350|transcription;GO:0016986|transcription initiation factor activity;GO:0003702|RNA polymerase II transcription factor activity | GhM_A05G0964.1,GhM_D13G2664.1,GhM_A10G2117.1,GhM_A13G2775.1,GhM_D10G2052.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G59790 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1076.1,GhM_D05G1090.1,GhM_A07G1116.1,GhM_A07G1158.1,GhM_D07G1138.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G56860 | UBA2A; UBP1 interacting protein 2a (UBA2a) | GO:0003723|RNA binding;GO:0005634|nucleus;GO:0048255|mRNA stabilization;GO:0017091|AU-rich element binding;GO:0009738|abscisic acid mediated signaling pathway | GhM_A05G1123.1,GhM_D05G1138.1,GhM_A08G2556.1,GhM_D08G2487.1,GhM_D03G1644.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G28110 | FRA8, IRX7; FRA8 (FRAGILE FIBER 8); glucuronosyltransferase/ transferase | GO:0009834|secondary cell wall biogenesis;GO:0010417|glucuronoxylan biosynthetic process;GO:0015020|glucuronosyltransferase activity;GO:0005794|Golgi apparatus;GO:0016740|transferase activity | GhM_A05G1178.1,GhM_D05G1197.1,GhM_A05G1179.1,GhM_A13G2973.1,GhM_D13G2878.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G26560 | ATP-dependent RNA helicase, putative | GO:0003723|RNA binding;GO:0004004|ATP-dependent RNA helicase activity;GO:0005739|mitochondrion;GO:0003676|nucleic acid binding;GO:0005829|cytosol;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A05G1248.1,GhM_D05G1266.1,GhM_A10G0083.1,GhM_D10G0068.1,GhM_A10G0084.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G21200 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A05G1261.1,GhM_D05G1278.1,GhM_D01G1573.1,GhM_D06G0949.1,GhM_D04G1007.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G80070 | SUS2, EMB33, EMB177, EMB14; SUS2 (ABNORMAL SUSPENSOR 2) | GO:0009507|chloroplast;GO:0016020|membrane;GO:0000398|nuclear mRNA splicing, via spliceosome | GhM_A05G1360.1,GhM_D05G1374.1,GhM_A05G1361.1,GhM_A10G0815.1,GhM_D10G0829.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G72050 | TFIIIA; TFIIIA (TRANSCRIPTION FACTOR IIIA); 5S rDNA binding / 5S rRNA binding / nucleic acid binding / transcription factor/ zinc ion binding | GO:0008097|5S rRNA binding;GO:0005634|nucleus;GO:0005730|nucleolus;GO:0003700|transcription factor activity | GhM_A05G1364.1,GhM_D05G1377.1,GhM_A05G3082.1,GhM_D05G3080.1,GhM_D01G1878.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G17730 | VPS46.1; VPS46.1 (VACUOLAR PROTEIN SORTING 46.1) | GO:0016192|vesicle-mediated transport;GO:0032509|endosome transport via multivesicular body sorting pathway;GO:0040007|growth;GO:0000578|embryonic axis specification;GO:0009790|embryonic development;GO:0005575|cellular_component | GhM_A05G1485.1,GhM_D05G1499.1,GhM_A06G2459.1,GhM_A10G0688.1,GhM_D10G0666.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G72970 | HTH, EDA17; HTH (HOTHEAD); FAD binding / aldehyde-lyase/ mandelonitrile lyase | GO:0046593|mandelonitrile lyase activity;GO:0009553|embryo sac development;GO:0005576|extracellular region;GO:0010430|fatty acid omega-oxidation;GO:0050660|FAD binding;GO:0007267|cell-cell signaling;GO:0016832|aldehyde-lyase activity | GhM_A05G1514.1,GhM_D05G1529.1,GhM_A08G2526.1,GhM_D10G0618.1,GhM_A10G0649.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G53800 | endonuclease | GO:0008150|biological_process;GO:0004519|endonuclease activity;GO:0005575|cellular_component | GhM_A05G1588.1,GhM_D10G0527.1,GhM_A10G0552.1,GhM_D05G1603.1,GhM_D05G1604.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G14362||AT1G53708 | DVL19, RTFL10; RTFL10 (ROTUNDIFOLIA LIKE 10)||RTFL9; RTFL9 (ROTUNDIFOLIA LIKE 9) | ;GO:0048367|shoot development;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G1594.1,GhM_D05G1608.1,GhM_Scaf128G284.1,GhM_D10G0520.1,GhM_A10G0546.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G29990 | PDF6; PDF6 (PREFOLDIN 6); unfolded protein binding | GO:0051082|unfolded protein binding;GO:0043622|cortical microtubule organization;GO:0005737|cytoplasm;GO:0006457|protein folding;GO:0016272|prefoldin complex | GhM_A05G1663.1,GhM_D05G1671.1,GhM_A10G0436.1,GhM_D10G0425.1,GhM_D01G1929.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G18780||AT5G44030 | CESA8, IRX1, ATCESA8, LEW2; IRX1 (IRREGULAR XYLEM 1); cellulose synthase/ transferase, transferring glycosyl groups||CESA4, IRX5, NWS2; CESA4 (CELLULOSE SYNTHASE A4); cellulose synthase/ transferase, transferring glycosyl groups | GO:0009834|secondary cell wall biogenesis;GO:0005618|cell wall;GO:0009832|plant-type cell wall biogenesis;GO:0006970|response to osmotic stress;GO:0016759|cellulose synthase activity;GO:0010116|positive regulation of abscisic acid biosynthetic process;GO:0030244|cellulose biosynthetic process;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium;GO:0016020|membrane | GhM_A05G1733.1,GhM_D08G0568.1,GhM_A07G2641.1,GhM_D07G2539.1,GhM_A08G0598.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G28520 | VOZ1, ATVOZ1; VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN); transcription activator | GO:0008150|biological_process;GO:0016563|transcription activator activity;GO:0005575|cellular_component | GhM_A05G1780.1,GhM_D05G1795.1,GhM_A06G1757.1,GhM_D06G1694.1,GhM_D06G2563.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G21585||AT4G21600 | ENDO4; ENDO4 (endonuclease 4); T/G mismatch-specific endonuclease/ endonuclease/ nucleic acid binding / single-stranded DNA specific endodeoxyribonuclease||ENDO5; ENDO5 (endonuclease 5); T/G mismatch-specific endonuclease/ endonuclease/ nucleic acid binding / single-stranded DNA specific endodeoxyribonuclease | GO:0012505|endomembrane system;GO:0003676|nucleic acid binding;GO:0004519|endonuclease activity | GhM_A05G1852.1,GhM_D05G1863.1,GhM_A09G0982.1,GhM_D09G0918.1,GhM_D06G1680.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G22104 | phototropic-responsive NPH3 protein-related | GO:0009416|response to light stimulus;GO:0005515|protein binding;GO:0004871|signal transducer activity | GhM_A05G1884.1,GhM_D05G1897.1,GhM_D05G1896.1,GhM_A10G0193.1,GhM_D10G0181.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G11580||AT4G28556 | RIC7; RIC7||ATPMEPCRA, PMEPCRA; PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase | GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0004857|enzyme inhibitor activity;GO:0009416|response to light stimulus;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0005886|plasma membrane | GhM_A05G1898.1,GhM_D05G1910.1,GhM_A06G1929.1,GhM_D06G1917.1,GhM_A06G1930.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G04210||AT4G22150 | PUX3; PUX3; protein binding||PUX4; PUX4; protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_A05G1948.1,GhM_D05G1958.1,GhM_A06G2634.1,GhM_D06G2621.1,GhM_D10G2488.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G12050 | fumarylacetoacetase, putative | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0009072|aromatic amino acid family metabolic process;GO:0004334|fumarylacetoacetase activity;GO:0005575|cellular_component | GhM_A05G1961.1,GhM_D05G1971.1,GhM_A06G2642.1,GhM_D06G2629.1,GhM_D13G1865.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G02870 | VTC4; VTC4; 3'(2'),5'-bisphosphate nucleotidase/ L-galactose-1-phosphate phosphatase/ inositol or phosphatidylinositol phosphatase/ inositol-1(or 4)-monophosphatase | GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0006790|sulfur metabolic process;GO:0008934|inositol-1(or 4)-monophosphatase activity;GO:0019853|L-ascorbic acid biosynthetic process;GO:0006021|inositol biosynthetic process;GO:0010347|L-galactose-1-phosphate phosphatase activity;GO:0005886|plasma membrane;GO:0008441|3'(2'),5'-bisphosphate nucleotidase activity;GO:0009409|response to cold | GhM_A05G1966.1,GhM_D10G0084.1,GhM_A10G0100.1,GhM_D05G1977.1,GhM_D05G1978.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G14840||AT4G17220 | ATMAP70-5; ATMAP70-5 (microtubule-associated proteins 70-5); microtubule binding||ATMAP70-4; ATMAP70-4 (microtubule-associated proteins 70-4); microtubule binding | GO:0008017|microtubule binding;GO:0005886|plasma membrane;GO:0007010|cytoskeleton organization;GO:0005874|microtubule | GhM_A05G1974.1,GhM_D05G1986.1,GhM_A05G1975.1,GhM_A06G2063.1,GhM_D06G2045.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G75660 | XRN3; XRN3; 5'-3' exoribonuclease | GO:0005634|nucleus;GO:0004534|5'-3' exoribonuclease activity | GhM_A05G2095.1,GhM_D05G2114.1,GhM_A05G2878.1,GhM_D05G2882.1,GhM_D12G1044.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G75460 | ATP-dependent protease La (LON) domain-containing protein | GO:0009507|chloroplast | GhM_A05G2120.1,GhM_D05G2141.1,GhM_A06G0070.1,GhM_D06G0067.1,GhM_D01G1227.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G19640 | JMT; JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE); jasmonate O-methyltransferase | GO:0009695|jasmonic acid biosynthetic process;GO:0009694|jasmonic acid metabolic process;GO:0030795|jasmonate O-methyltransferase activity;GO:0009611|response to wounding;GO:0005737|cytoplasm;GO:0009867|jasmonic acid mediated signaling pathway | GhM_A05G2145.1,GhM_D05G2168.1,GhM_D06G0084.1,GhM_A06G0084.1,GhM_D05G2167.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G37940 | AGL21; AGL21; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0006355|regulation of transcription, DNA-dependent | GhM_A05G2440.1,GhM_D05G2450.1,GhM_D11G0599.1,GhM_A06G0323.1,GhM_D06G0336.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G10940 | transducin family protein / WD-40 repeat family protein | GO:0005886|plasma membrane | GhM_A05G2479.1,GhM_D05G2492.1,GhM_A06G0357.1,GhM_D06G0369.1,GhM_D08G1670.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G14680||AT4G00390||AT4G09060 | unknown protein||transcription regulator | GO:0008150|biological_process;GO:0030528|transcription regulator activity;GO:0003674|molecular_function;GO:0005730|nucleolus;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A05G2499.1,GhM_D05G2512.1,GhM_A05G2500.1,GhM_A06G0372.1,GhM_D06G0382.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G08960 | phosphotyrosyl phosphatase activator (PTPA) family protein | GO:0008150|biological_process;GO:0019211|phosphatase activator activity;GO:0005575|cellular_component | GhM_A05G2522.1,GhM_D05G2534.1,GhM_A05G2523.1,GhM_D06G0401.1,GhM_A06G0394.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G78160 | APUM7; APUM7 (Arabidopsis Pumilio 7); RNA binding / binding | GO:0003729|mRNA binding;GO:0003723|RNA binding;GO:0005737|cytoplasm | GhM_A05G2551.1,GhM_D05G2562.1,GhM_A06G0411.1,GhM_D06G0420.1,GhM_D06G0419.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G22050 | MUB6; MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR) | GO:0006464|protein modification process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G2576.1,GhM_D05G2589.1,GhM_A06G0460.1,GhM_D06G0473.1,GhM_D06G0438.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G77720 | protein kinase family protein | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G2601.1,GhM_D05G2614.1,GhM_A06G0492.1,GhM_D06G0505.1,GhM_A06G0493.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G52190||AT3G16180 | proton-dependent oligopeptide transport (POT) family protein | GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A05G2784.1,GhM_D05G2801.1,GhM_A09G0274.1,GhM_D09G0254.1,GhM_D09G0253.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G34220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G2791.1,GhM_D05G2794.1,GhM_A06G1447.1,GhM_D06G1396.1,GhM_D06G1395.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G10070||AT1G33680 | KH domain-containing protein||RNA binding / nucleic acid binding | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A05G2843.1,GhM_D05G2845.1,GhM_A13G1585.1,GhM_D13G1465.1,GhM_D05G2844.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G57655 | xylose isomerase family protein | GO:0005783|endoplasmic reticulum | GhM_A05G3165.1,GhM_D05G3168.1,GhM_A06G2328.1,GhM_D06G2333.1,GhM_D06G2332.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G60240 | EIF4G, CUM2; EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G); translation initiation factor | GO:0009615|response to virus;GO:0003743|translation initiation factor activity | GhM_A05G3182.1,GhM_A08G1889.1,GhM_A06G2048.1,GhM_D08G1840.1,GhM_D05G3184.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G12280 | RBR1, RBR, RB, ATRBR1; RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding | GO:0051726|regulation of cell cycle;GO:0000280|nuclear division;GO:0009555|pollen development;GO:0000082|G1/S transition of mitotic cell cycle;GO:0019827|stem cell maintenance;GO:0001708|cell fate specification;GO:0006349|regulation of gene expression by genetic imprinting;GO:0010090|trichome morphogenesis;GO:0032875|regulation of DNA endoreduplication;GO:0016049|cell growth;GO:0048366|leaf development;GO:0005829|cytosol;GO:0009553|embryo sac development;GO:0022619|generative cell differentiation;GO:0009960|endosperm development;GO:0008134|transcription factor binding;GO:0009567|double fertilization forming a zygote and endosperm | GhM_A05G3205.1,GhM_D05G3198.1,GhM_A05G3206.1,GhM_D04G0195.1,GhM_A05G4793.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G32020 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A05G3606.1,GhM_A07G0393.1,GhM_D07G0391.1,GhM_D06G1253.1,GhM_A06G1228.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00130 | ATPF; ATPase F subunit. | GO:0009579|thylakoid | GhM_A05G3673.1,GhM_Scaf220G347.1,GhM_A10G0734.1,GhM_A11G1187.1,GhM_D05G3294.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G23790||AT4G14070 | AMP-binding protein, putative||AAE15; AAE15 (acyl-activating enzyme 15); long-chain-fatty-acid-[acyl-carrier-protein] ligase | GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0009536|plastid;GO:0030497|fatty acid elongation;GO:0008922|long-chain-fatty-acid-[acyl-carrier-protein] ligase activity | GhM_A05G3762.1,GhM_D05G3771.1,GhM_A10G1580.1,GhM_D10G1529.1,GhM_D13G1041.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G31160 | zinc-binding protein, putative / protein kinase C inhibitor, putative | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0008270|zinc ion binding;GO:0005080|protein kinase C binding | GhM_A05G3903.1,GhM_D10G2349.1,GhM_A09G0587.1,GhM_D12G0513.1,GhM_A12G0520.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G24760 | alcohol dehydrogenase, putative | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0016491|oxidoreductase activity | GhM_A05G3914.1,GhM_A11G2563.1,GhM_A08G2920.1,GhM_D08G2858.1,GhM_A11G2922.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G09870 | histidine acid phosphatase family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003993|acid phosphatase activity | GhM_A05G3932.1,GhM_D04G0830.1,GhM_A05G3933.1,GhM_A06G2125.1,GhM_D06G2104.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G05460||AT3G11040 | hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase||glycosyl hydrolase family 85 protein | GO:0008150|biological_process;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0009507|chloroplast;GO:0005737|cytoplasm;GO:0033925|mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | GhM_A05G3935.1,GhM_D10G2942.1,GhM_A10G2990.1,GhM_D04G0833.1,GhM_D04G0832.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G27150 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4025.1,GhM_D04G0916.1,GhM_A07G2920.1,GhM_D07G2821.1,GhM_D04G0915.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G14240 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Phosducin (InterPro:IPR001200), Thioredoxin-like fold (InterPro:IPR012336); Has 750 Blast hits to 750 proteins in 282 species: Archae - 0; Bacteria - 2; Metazoa - 486; Fungi - 126; Plants - 51; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4039.1,GhM_D04G0931.1,GhM_A09G0473.1,GhM_D09G0432.1,GhM_A09G0474.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G37340 | RSZ33; RSZ33; nucleic acid binding / zinc ion binding | GO:0000245|spliceosome assembly;GO:0000166|nucleotide binding;GO:0008380|RNA splicing;GO:0003676|nucleic acid binding;GO:0000398|nuclear mRNA splicing, via spliceosome;GO:0016607|nuclear speck;GO:0008270|zinc ion binding | GhM_A05G4074.1,GhM_D04G0965.1,GhM_A13G0252.1,GhM_A06G2200.1,GhM_D06G2180.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G63220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4087.1,GhM_D04G0978.1,GhM_A13G0261.1,GhM_D13G0249.1,GhM_D05G3640.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G12590 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_A05G4202.1,GhM_D04G0726.1,GhM_A10G2739.1,GhM_A08G1233.1,GhM_D10G2672.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G55200 | splicing factor, putative | GO:0008150|biological_process;GO:0005634|nucleus;GO:0003676|nucleic acid binding;GO:0009507|chloroplast | GhM_A05G4221.1,GhM_D10G2578.1,GhM_A10G2663.1,GhM_D04G0710.1,GhM_D04G0711.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G13560 | unknown protein | GO:0008150|biological_process;GO:0005829|cytosol | GhM_A05G4227.1,GhM_D04G0705.1,GhM_A05G4228.1,GhM_A10G2654.1,GhM_D10G2570.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G14700 | cinnamoyl-CoA reductase-related | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0006694|steroid biosynthetic process;GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity | GhM_A05G4287.1,GhM_D04G0649.1,GhM_A09G0354.1,GhM_D09G0330.1,GhM_D09G0001.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G14970 | unknown protein | - | GhM_A05G4325.1,GhM_D04G0613.1,GhM_A12G0653.1,GhM_D12G0654.1,GhM_D04G1924.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G01040 | GAUT13; GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0016051|carbohydrate biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0047262|polygalacturonate 4-alpha-galacturonosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A05G4422.1,GhM_D04G0521.1,GhM_A09G0125.1,GhM_A11G0834.1,GhM_D11G0852.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G22290||AT3G58850 | unknown protein||PAR2, HLH2; PAR2 (PHY RAPIDLY REGULATED 2) | GO:0008150|biological_process;GO:0032502|developmental process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009641|shade avoidance;GO:0005575|cellular_component | GhM_A05G4529.1,GhM_D04G0417.1,GhM_A11G0718.1,GhM_D11G0725.1,GhM_D11G0724.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G65295 | unknown protein | GO:0012505|endomembrane system | GhM_A05G4657.1,GhM_D04G0290.1,GhM_A13G2073.1,GhM_D13G1965.1,GhM_D13G1067.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G26710 | glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative | GO:0006412|translation;GO:0006418|tRNA aminoacylation for protein translation;GO:0006424|glutamyl-tRNA aminoacylation;GO:0005737|cytoplasm | GhM_A05G4709.1,GhM_D04G0231.1,GhM_A10G2451.1,GhM_D10G2377.1,GhM_A10G2452.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G79600 | ABC1 family protein | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0010287|plastoglobule;GO:0005524|ATP binding | GhM_A05G4774.1,GhM_D04G0181.1,GhM_A08G1229.1,GhM_A10G2326.1,GhM_D10G2248.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G14010 | CID4; CID4 (CTC-Interacting Domain 4); protein binding | GO:0005515|protein binding | GhM_A05G4832.1,GhM_D04G0119.1,GhM_A06G2482.1,GhM_D06G2481.1,GhM_A10G0585.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53140 | protein phosphatase 2C, putative / PP2C, putative | GO:0006470|protein amino acid dephosphorylation;GO:0004722|protein serine/threonine phosphatase activity;GO:0008287|protein serine/threonine phosphatase complex;GO:0003824|catalytic activity | GhM_A05G4904.1,GhM_A12G3084.1,GhM_A08G1232.1,GhM_D08G1223.1,GhM_D12G2967.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53130 | CNGC1, ATCNGC1; CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1); calmodulin binding / cation channel/ cyclic nucleotide binding / intracellular cyclic nucleotide activated cation channel/ inward rectifier potassium channel | GO:0030551|cyclic nucleotide binding;GO:0005261|cation channel activity;GO:0005516|calmodulin binding;GO:0006813|potassium ion transport;GO:0005242|inward rectifier potassium channel activity;GO:0005221|intracellular cyclic nucleotide activated cation channel activity;GO:0006816|calcium ion transport;GO:0005886|plasma membrane | GhM_A05G4907.1,GhM_D04G0040.1,GhM_A08G1217.1,GhM_D08G1222.1,GhM_A08G1230.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G07050||AT3G30340 | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink).||nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0016020|membrane | GhM_A05G4928.1,GhM_D04G0019.1,GhM_A12G3018.1,GhM_Scaf049G195.1,GhM_D12G2904.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G63270 | ATNAP10; ATNAP10; transporter | GO:0005215|transporter activity;GO:0006810|transport | GhM_A06G0045.1,GhM_D10G0359.1,GhM_A10G0371.1,GhM_D06G1194.1,GhM_D06G0042.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G13030 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A06G0112.1,GhM_A12G1660.1,GhM_A07G1543.1,GhM_D07G1512.1,GhM_D12G1607.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G24150 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G0641.1,GhM_D06G0636.1,GhM_A13G2627.1,GhM_D13G2527.1,GhM_A13G2626.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G52600 | signal peptidase, putative | GO:0008233|peptidase activity;GO:0006465|signal peptide processing;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005783|endoplasmic reticulum | GhM_A06G0668.1,GhM_D06G0673.1,GhM_A10G0832.1,GhM_D10G0809.1,GhM_D05G1401.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G13270||AT2G25735 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A06G0725.1,GhM_D06G0727.1,GhM_A07G0083.1,GhM_D07G0061.1,GhM_D07G0060.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G29060 | emb2726; emb2726 (embryo defective 2726); RNA binding / translation elongation factor | GO:0003723|RNA binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0009570|chloroplast stroma | GhM_A06G0766.1,GhM_D06G0766.1,GhM_A13G2578.1,GhM_D13G2491.1,GhM_A13G2577.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G21600 | senescence/dehydration-associated protein-related | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A06G0796.1,GhM_D06G0799.1,GhM_D08G3049.1,GhM_A08G3123.1,GhM_D06G0798.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G51980 | mitochondrial processing peptidase alpha subunit, putative | GO:0009507|chloroplast;GO:0009536|plastid;GO:0005750|mitochondrial respiratory chain complex III;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A06G0817.1,GhM_D13G2478.1,GhM_A08G3133.1,GhM_D08G3059.1,GhM_A13G2564.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G35570 | unknown protein | GO:0009507|chloroplast | GhM_A06G0902.1,GhM_D06G0913.1,GhM_A06G0903.1,GhM_A13G2525.1,GhM_D13G2438.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G20680 | unknown protein | GO:0008150|biological_process | GhM_A06G0927.1,GhM_D06G0934.1,GhM_A06G0928.1,GhM_A07G0181.1,GhM_D07G0180.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G20720 | CPN20, CPN10, CHCPN10, ATCPN21, CPN21; CPN20 (CHAPERONIN 20); calmodulin binding | GO:0005507|copper ion binding;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0005516|calmodulin binding;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009535|chloroplast thylakoid membrane;GO:0009409|response to cold | GhM_A06G0939.1,GhM_A09G2514.1,GhM_A07G0193.1,GhM_D07G0193.1,GhM_D06G0950.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G11890 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17620.1); Has 455 Blast hits to 454 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0003674|molecular_function | GhM_A06G1054.1,GhM_D06G1064.1,GhM_D08G3106.1,GhM_A08G3179.1,GhM_D07G0249.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G15370 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); Has 48 Blast hits to 48 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 39; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | GO:0006810|transport;GO:0003674|molecular_function | GhM_A06G1195.1,GhM_D06G1224.1,GhM_A10G0828.1,GhM_D10G0813.1,GhM_D07G1880.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G32060 | calcium-binding EF hand family protein | GO:0005509|calcium ion binding | GhM_A06G1220.1,GhM_D06G1246.1,GhM_A13G2422.1,GhM_D13G2319.1,GhM_D03G0485.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G10310 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0006760|folic acid and derivative metabolic process;GO:0005829|cytosol;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016491|oxidoreductase activity | GhM_A06G1236.1,GhM_D06G1257.1,GhM_A10G0048.1,GhM_D10G0036.1,GhM_D06G1238.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G13680 | phospholipase C/ phosphoric diester hydrolase | GO:0008081|phosphoric diester hydrolase activity;GO:0004629|phospholipase C activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | GhM_A06G1306.1,GhM_A11G1860.1,GhM_A10G1350.1,GhM_D11G1848.1,GhM_A11G2370.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G04960 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A06G1599.1,GhM_D06G1649.1,GhM_A10G0281.1,GhM_D10G0265.1,GhM_D10G0266.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G42620 | MAX2, ORE9, PP2; MAX2 (MORE AXILLARY BRANCHES 2); ubiquitin-protein ligase | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0009926|auxin polar transport;GO:0000151|ubiquitin ligase complex;GO:0009934|regulation of meristem structural organization;GO:0009416|response to light stimulus;GO:0010016|shoot morphogenesis;GO:0009414|response to water deprivation;GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0007568|aging | GhM_A06G1705.1,GhM_A10G0393.1,GhM_D10G0381.1,GhM_D06G1722.1,GhM_D06G1723.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G30300 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G1833.1,GhM_D06G1813.1,GhM_A06G2513.1,GhM_D06G2508.1,GhM_D11G2626.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G04780 | MED21; MED21 (MEDIATOR 21) | GO:0045449|regulation of transcription;GO:0009817|defense response to fungus, incompatible interaction;GO:0016592|mediator complex | GhM_A06G1958.1,GhM_D06G1938.1,GhM_D10G0802.1,GhM_D02G2044.1,GhM_D09G0589.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G05160||AT2G32440 | KAO2, CYP88A4; KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding||CYP88A3, ATKAO1, KAO1; CYP88A3 (CYTOCHROME P450 88 A3); ent-kaurenoate oxidase/ oxygen binding | GO:0009686|gibberellin biosynthetic process;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0051777|ent-kaurenoate oxidase activity | GhM_A06G2073.1,GhM_D06G2057.1,GhM_A06G2074.1,GhM_A13G0144.1,GhM_D13G0141.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G63780 | IMP4; IMP4 | GO:0003674|molecular_function;GO:0015030|Cajal body;GO:0005732|small nucleolar ribonucleoprotein complex;GO:0006364|rRNA processing;GO:0005730|nucleolus;GO:0016363|nuclear matrix | GhM_A06G2093.1,GhM_D12G1332.1,GhM_A11G3210.1,GhM_D11G3128.1,GhM_D06G2075.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G39970 | peroxisomal membrane protein (PMP36) | GO:0006810|transport;GO:0005488|binding;GO:0005778|peroxisomal membrane;GO:0005886|plasma membrane;GO:0005743|mitochondrial inner membrane | GhM_A06G2155.1,GhM_D10G2879.1,GhM_A10G2902.1,GhM_D06G2133.1,GhM_D06G2134.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G28060 | small nuclear ribonucleoprotein family protein / snRNP family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G2199.1,GhM_D06G2179.1,GhM_A10G2653.1,GhM_D10G2568.1,GhM_D10G2569.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G52060 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A06G2250.1,GhM_D06G2226.1,GhM_A06G2251.1,GhM_A10G2498.1,GhM_D10G2416.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G65440 | GTB1; GTB1; RNA binding / hydrolase, acting on ester bonds / transcription elongation regulator | GO:0003723|RNA binding;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006333|chromatin assembly or disassembly;GO:0006352|transcription initiation;GO:0003711|transcription elongation regulator activity;GO:0005575|cellular_component | GhM_A06G2291.1,GhM_D06G2285.1,GhM_A10G2427.1,GhM_D10G2354.1,GhM_A13G2094.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G80100 | AHP6; AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | GO:0009735|response to cytokinin stimulus;GO:0009736|cytokinin mediated signaling pathway;GO:0000160|two-component signal transduction system (phosphorelay);GO:0016772|transferase activity, transferring phosphorus-containing groups;GO:0010089|xylem development;GO:0005575|cellular_component | GhM_A06G2413.1,GhM_D06G2413.1,GhM_A09G1146.1,GhM_D09G1073.1,GhM_D06G1479.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G46250 | RNA recognition motif (RRM)-containing protein | GO:0003723|RNA binding;GO:0030529|ribonucleoprotein complex;GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0006396|RNA processing | GhM_A06G2525.1,GhM_D06G2520.1,GhM_D10G0423.1,GhM_A10G0434.1,GhM_D10G0422.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G61290 | SYP124, ATSYP124; SYP124 (SYNTAXIN OF PLANTS 124); SNAP receptor | GO:0006886|intracellular protein transport;GO:0016020|membrane;GO:0006944|cellular membrane fusion;GO:0005484|SNAP receptor activity | GhM_A06G2599.1,GhM_D06G2590.1,GhM_A10G0223.1,GhM_D10G0208.1,GhM_D12G1726.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G24480||AT4G18670 | leucine-rich repeat family protein / extensin family protein||protein binding / structural constituent of cell wall | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0005199|structural constituent of cell wall | GhM_A07G0049.1,GhM_D10G1202.1,GhM_A07G0088.1,GhM_D05G0247.1,GhM_D07G0054.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A07G0107.1,GhM_D08G2560.1,GhM_A12G0413.1,GhM_D03G0323.1,GhM_D02G2682.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G61920||AT1G55170||AT3G14750 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G0448.1,GhM_D07G0445.1,GhM_D02G1785.1,GhM_D05G3864.1,GhM_D09G0523.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G25240||AT4G12420 | SKU5; SKU5; copper ion binding / oxidoreductase||SKS1; SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase | GO:0008150|biological_process;GO:0005507|copper ion binding;GO:0009505|plant-type cell wall;GO:0046658|anchored to plasma membrane;GO:0048046|apoplast;GO:0009932|cell tip growth;GO:0005618|cell wall;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016491|oxidoreductase activity | GhM_A07G0515.1,GhM_D07G0507.1,GhM_A09G2376.1,GhM_D09G2264.1,GhM_D12G2621.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G62000 | ARF2, ARF1-BP, HSS; ARF2 (AUXIN RESPONSE FACTOR 2); protein binding / transcription factor | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0010150|leaf senescence;GO:0005634|nucleus;GO:0008285|negative regulation of cell proliferation;GO:0045892|negative regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0010047|fruit dehiscence;GO:0009911|positive regulation of flower development;GO:0010227|floral organ abscission;GO:0048481|ovule development | GhM_A07G0585.1,GhM_D07G0573.1,GhM_A11G0478.1,GhM_D11G0459.1,GhM_D12G2342.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G48610 | phosphoesterase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds | GhM_A07G0619.1,GhM_D07G0613.1,GhM_A11G0457.1,GhM_D11G0438.1,GhM_A13G1286.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G56110||AT3G12860 | NOP56; NOP56 (Arabidopsis homolog of nucleolar protein Nop56)||nucleolar protein Nop56, putative | GO:0008150|biological_process;GO:0005730|nucleolus;GO:0005618|cell wall | GhM_A07G0640.1,GhM_A11G0450.1,GhM_D11G0431.1,GhM_D07G0633.1,GhM_D07G0634.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18490 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G0695.1,GhM_D07G0689.1,GhM_A07G0696.1,GhM_A11G0435.1,GhM_D11G0416.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18330 | EPR1; EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor | GO:0045449|regulation of transcription;GO:0046686|response to cadmium ion;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009723|response to ethylene stimulus;GO:0007623|circadian rhythm | GhM_A07G0746.1,GhM_D07G0736.1,GhM_A12G3330.1,GhM_D12G3216.1,GhM_D07G0737.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18720||AT1G74440 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G0782.1,GhM_D07G0777.1,GhM_A09G2478.1,GhM_D09G2365.1,GhM_D08G1862.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G59440 | ZEU1, ATTMPK.2; ZEU1 (ZEUS1); ATP binding / thymidylate kinase | GO:0006233|dTDP biosynthetic process;GO:0005654|nucleoplasm;GO:0005737|cytoplasm;GO:0005739|mitochondrion;GO:0019690|pyrimidine deoxyribonucleoside interconversion;GO:0004798|thymidylate kinase activity;GO:0005524|ATP binding;GO:0009061|anaerobic respiration | GhM_A07G0910.1,GhM_D07G0912.1,GhM_A11G1946.1,GhM_D11G1935.1,GhM_D07G2334.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G58850 | ATMYB119, MYB119; MYB119 (MYB DOMAIN PROTEIN 119); DNA binding / transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A07G1242.1,GhM_D07G1224.1,GhM_A10G0451.1,GhM_D10G0432.1,GhM_A10G0452.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G33790 | CER4, G7, FAR3; CER4 (ECERIFERUM 4); fatty acyl-CoA reductase (alcohol-forming)/ oxidoreductase, acting on the CH-CH group of donors | GO:0009556|microsporogenesis;GO:0010025|wax biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors | GhM_A07G1313.1,GhM_D07G1291.1,GhM_A08G0101.1,GhM_D08G0086.1,GhM_A09G0574.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G12200 | dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) | GO:0012505|endomembrane system;GO:0004157|dihydropyrimidinase activity;GO:0043562|cellular response to nitrogen levels;GO:0006212|uracil catabolic process | GhM_A07G1441.1,GhM_D07G1418.1,GhM_A08G0161.1,GhM_D08G0150.1,GhM_D08G0151.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G54540 | ATGCN4; ATGCN4; transporter | GO:0005215|transporter activity | GhM_A07G1443.1,GhM_D07G1420.1,GhM_A09G1420.1,GhM_D09G1332.1,GhM_A09G1421.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G47510 | FUM1; FUM1 (FUMARASE 1); catalytic/ fumarate hydratase | GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0004333|fumarate hydratase activity;GO:0005739|mitochondrion;GO:0009651|response to salt stress;GO:0048868|pollen tube development | GhM_A07G1534.1,GhM_D07G1502.1,GhM_A08G0529.1,GhM_D08G0504.1,GhM_D13G1531.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G01120 | KCS1; KCS1 (3-KETOACYL-COA SYNTHASE 1); acyltransferase/ fatty acid elongase | GO:0022626|cytosolic ribosome;GO:0000038|very-long-chain fatty acid metabolic process;GO:0042335|cuticle development;GO:0009416|response to light stimulus;GO:0008415|acyltransferase activity;GO:0010025|wax biosynthetic process;GO:0030497|fatty acid elongation;GO:0016020|membrane;GO:0009922|fatty acid elongase activity;GO:0005783|endoplasmic reticulum;GO:0009409|response to cold | GhM_A07G1636.1,GhM_D07G1602.1,GhM_A12G1519.1,GhM_D12G1462.1,GhM_D08G1633.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G46620 | AAA-type ATPase family protein | GO:0012505|endomembrane system;GO:0016887|ATPase activity;GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding | GhM_A07G1652.1,GhM_D07G1620.1,GhM_A08G1693.1,GhM_D08G1641.1,GhM_A11G1156.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G01300 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0009505|plant-type cell wall;GO:0016020|membrane | GhM_A07G1673.1,GhM_D07G1639.1,GhM_A11G1128.1,GhM_D12G1425.1,GhM_D11G1140.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G43940 | HOT5, ADH2, GSNOR; HOT5 (sensitive to hot temperatures 5); S-(hydroxymethyl)glutathione dehydrogenase/ S-nitrosoglutathione reductase | GO:0046292|formaldehyde metabolic process;GO:0005777|peroxisome;GO:0009611|response to wounding;GO:0048316|seed development;GO:0008219|cell death;GO:0051903|S-(hydroxymethyl)glutathione dehydrogenase activity;GO:0010286|heat acclimation | GhM_A07G1894.1,GhM_D07G2522.1,GhM_A07G2623.1,GhM_D07G1847.1,GhM_D06G1031.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G07050 | GTP-binding family protein | GO:0008150|biological_process;GO:0005730|nucleolus;GO:0005525|GTP binding | GhM_A07G1935.1,GhM_D07G1890.1,GhM_A11G1603.1,GhM_D11G1596.1,GhM_A09G2423.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G24840 | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | GO:0005622|intracellular;GO:0005215|transporter activity;GO:0006810|transport | GhM_A07G1943.1,GhM_D07G1898.1,GhM_A11G1613.1,GhM_D11G1611.1,GhM_A11G1614.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A07G2110.1,GhM_A10G1869.1,GhM_D13G0891.1,GhM_D06G1459.1,GhM_D13G0336.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A07G2193.1,GhM_Scaf003G068.1,GhM_A12G0960.1,GhM_A12G2277.1,GhM_D01G2042.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G65970||AT2G17480||AT2G16370 | MLO10, ATMLO10; MLO10 (MILDEW RESISTANCE LOCUS O 10); calmodulin binding||THY-1; THY-1 (THYMIDYLATE SYNTHASE 1); dihydrofolate reductase/ thymidylate synthase||MLO8, ATMLO8; MLO8 (MILDEW RESISTANCE LOCUS O 8); calmodulin binding | GO:0005516|calmodulin binding;GO:0004799|thymidylate synthase activity;GO:0006952|defense response;GO:0008219|cell death;GO:0004146|dihydrofolate reductase activity;GO:0009257|10-formyltetrahydrofolate biosynthetic process;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0016021|integral to membrane | GhM_A07G2209.1,GhM_D07G2123.1,GhM_D10G1774.1,GhM_D02G1343.1,GhM_D10G1775.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A07G2359.1,GhM_D02G1358.1,GhM_A09G0427.1,GhM_A13G1815.1,GhM_A10G1198.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G05320 | beta-1,2-N-acetylglucosaminyltransferase II | GO:0005795|Golgi stack;GO:0009312|oligosaccharide biosynthetic process;GO:0016021|integral to membrane;GO:0008455|alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity;GO:0008375|acetylglucosaminyltransferase activity | GhM_A07G2475.1,GhM_D07G2377.1,GhM_A07G2476.1,GhM_A11G1752.1,GhM_D11G1736.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G14910 | heavy-metal-associated domain-containing protein | GO:0009507|chloroplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0030001|metal ion transport;GO:0046872|metal ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A07G2806.1,GhM_D07G2713.1,GhM_D05G3024.1,GhM_D08G1661.1,GhM_D08G1793.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G27970||AT5G40310 | exonuclease family protein||exonuclease/ nucleic acid binding / zinc ion binding | GO:0008150|biological_process;GO:0004527|exonuclease activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A07G2831.1,GhM_D07G2737.1,GhM_D11G3646.1,GhM_D09G0323.1,GhM_A09G0346.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G06720 | peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0009055|electron carrier activity | GhM_A07G2912.1,GhM_D11G2527.1,GhM_A08G2955.1,GhM_D08G2894.1,GhM_A11G2372.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G01910 | SOX, AT-SO, AtSO; SOX (SULFITE OXIDASE); sulfite oxidase | GO:0005777|peroxisome;GO:0010477|response to sulfur dioxide;GO:0006790|sulfur metabolic process;GO:0005739|mitochondrion;GO:0008482|sulfite oxidase activity;GO:0015994|chlorophyll metabolic process | GhM_A07G2922.1,GhM_D07G2823.1,GhM_A07G2923.1,GhM_A09G0491.1,GhM_D09G0447.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G27110 | peptidase M48 family protein | GO:0006508|proteolysis;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A07G2925.1,GhM_D07G2824.1,GhM_A11G0752.1,GhM_D11G0764.1,GhM_D08G1355.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G41080||AT3G02040 | glycerophosphoryl diester phosphodiesterase family protein||SRG3; SRG3 (senescence-related gene 3); glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase | GO:0008081|phosphoric diester hydrolase activity;GO:0008889|glycerophosphodiester phosphodiesterase activity;GO:0006071|glycerol metabolic process;GO:0006629|lipid metabolic process | GhM_A07G2962.1,GhM_A10G0785.1,GhM_D10G0859.1,GhM_D07G2862.1,GhM_D07G2863.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G26970 | exonuclease family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004527|exonuclease activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding | GhM_A08G0024.1,GhM_D08G0018.1,GhM_A13G2943.1,GhM_D13G2846.1,GhM_D04G1239.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G22450 | unknown protein | GO:0009507|chloroplast | GhM_A08G0106.1,GhM_D08G0092.1,GhM_A09G1261.1,GhM_D09G1191.1,GhM_A09G1262.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G00290||AT4G00234 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein (TAIR:AT4G00290.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).||mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A08G0419.1,GhM_D12G1360.1,GhM_A12G1429.1,GhM_D08G0405.1,GhM_D08G0406.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G02210 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0527.1,GhM_D08G0503.1,GhM_A08G0857.1,GhM_A08G0528.1,GhM_A08G0858.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G28770 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20230.1); Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005773|vacuole;GO:0003674|molecular_function | GhM_A08G0604.1,GhM_D08G0573.1,GhM_A08G2492.1,GhM_D08G2438.1,GhM_D11G2047.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G06730 | pfkB-type carbohydrate kinase family protein | GO:0005634|nucleus;GO:0016301|kinase activity;GO:0019303|D-ribose catabolic process;GO:0005737|cytoplasm | GhM_A08G0776.1,GhM_D11G1495.1,GhM_A11G1506.1,GhM_D08G0745.1,GhM_D08G0746.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G42820||AT1G27650 | ATU2AF35A; ATU2AF35A; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding||ATU2AF35B, U2AF35B; U2AF35B; RNA binding / nucleic acid binding / nucleotide binding / zinc ion binding | GO:0003723|RNA binding;GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0048573|photoperiodism, flowering | GhM_A08G0791.1,GhM_D08G2394.1,GhM_A08G2444.1,GhM_D09G1162.1,GhM_A09G1231.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G03150||AT3G63170 | chalcone isomerase||GCN5-related N-acetyltransferase (GNAT) family protein | GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0045430|chalcone isomerase activity;GO:0009813|flavonoid biosynthetic process;GO:0005575|cellular_component;GO:0008080|N-acetyltransferase activity | GhM_A08G0838.1,GhM_D08G0796.1,GhM_A08G2424.1,GhM_D08G2368.1,GhM_A08G2423.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G63120 | CYCP1;1; CYCP1;1 (cyclin p1;1); cyclin-dependent protein kinase | GO:0051726|regulation of cell cycle;GO:0004693|cyclin-dependent protein kinase activity;GO:0005575|cellular_component | GhM_A08G0846.1,GhM_D08G0801.1,GhM_A11G1438.1,GhM_D11G1430.1,GhM_D11G1431.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G62000||AT1G48910 | YUC10; YUC10; FAD binding / monooxygenase/ oxidoreductase||ARF2, ARF1-BP, HSS; ARF2 (AUXIN RESPONSE FACTOR 2); protein binding / transcription factor | GO:0009653|anatomical structure morphogenesis;GO:0005515|protein binding;GO:0009507|chloroplast;GO:0010150|leaf senescence;GO:0005634|nucleus;GO:0008285|negative regulation of cell proliferation;GO:0045892|negative regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0010047|fruit dehiscence;GO:0016491|oxidoreductase activity;GO:0050660|FAD binding;GO:0009911|positive regulation of flower development;GO:0010227|floral organ abscission;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0048481|ovule development | GhM_A08G0902.1,GhM_D08G0862.1,GhM_A08G0904.1,GhM_A08G1585.1,GhM_D08G1534.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G62860 | esterase/lipase/thioesterase family protein | GO:0005886|plasma membrane;GO:0003824|catalytic activity | GhM_A08G0957.1,GhM_D08G0913.1,GhM_A08G1607.1,GhM_A11G1342.1,GhM_D11G1340.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G23880||AT3G06240||AT1G50870 | F-box family protein | GO:0008150|biological_process;GO:0005634|nucleus;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G1215.1,GhM_D08G1200.1,GhM_A12G3074.1,GhM_D12G2957.1,GhM_D06G0833.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G23940 | EMB3009; EMB3009 (embryo defective 3009); transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0010143|cutin biosynthetic process;GO:0048730|epidermis morphogenesis;GO:0010090|trichome morphogenesis;GO:0009793|embryonic development ending in seed dormancy;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005737|cytoplasm;GO:0016740|transferase activity;GO:0051179|localization | GhM_A08G1305.1,GhM_D08G1283.1,GhM_A09G0519.1,GhM_A11G0130.1,GhM_D11G0126.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G42050||AT4G16580 | catalytic||FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). | GO:0003824|catalytic activity;GO:0003674|molecular_function | GhM_A08G1437.1,GhM_D08G1421.1,GhM_A12G2940.1,GhM_D12G2828.1,GhM_D08G1423.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G27585 | band 7 family protein | GO:0008150|biological_process;GO:0008270|zinc ion binding | GhM_A08G1503.1,GhM_D08G1348.1,GhM_A12G3017.1,GhM_Scaf049G194.1,GhM_D12G2903.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G62940 | OTU-like cysteine protease family protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A08G1592.1,GhM_D08G1543.1,GhM_A12G0088.1,GhM_A12G0089.1,GhM_D12G0096.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G10810||AT1G64584 | unknown protein|| | GO:0008150|biological_process;;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_A08G1703.1,GhM_D08G1651.1,GhM_D04G1036.1,GhM_A11G1146.1,GhM_D11G1162.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G01050 | hydroxyproline-rich glycoprotein family protein | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0009772|photosynthetic electron transport in photosystem II;GO:0042742|defense response to bacterium;GO:0009535|chloroplast thylakoid membrane | GhM_A08G1718.1,GhM_D08G1667.1,GhM_D12G1408.1,GhM_A12G1470.1,GhM_D12G1407.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G00630 | KEA2, ATKEA2; KEA2; potassium ion transmembrane transporter/ potassium:hydrogen antiporter | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0015386|potassium:hydrogen antiporter activity;GO:0006813|potassium ion transport;GO:0006812|cation transport;GO:0016020|membrane;GO:0015079|potassium ion transmembrane transporter activity | GhM_A08G1770.1,GhM_D08G1722.1,GhM_A12G1393.1,GhM_D12G1336.1,GhM_D07G1720.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G51380 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A08G1847.1,GhM_D08G1798.1,GhM_A12G1281.1,GhM_D12G1213.1,GhM_D12G1214.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G17080 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); BEST Arabidopsis thaliana protein match is: MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related (TAIR:AT2G35170.1); Has 18005 Blast hits to 5199 proteins in 343 species: Archae - 0; Bacteria - 1726; Metazoa - 3046; Fungi - 93; Plants - 653; Viruses - 0; Other Eukaryotes - 12487 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G1886.1,GhM_D08G1837.1,GhM_A11G0867.1,GhM_D11G0882.1,GhM_A12G1317.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G13800 | hydrolase, alpha/beta fold family protein | GO:0009507|chloroplast | GhM_A08G1896.1,GhM_D08G1851.1,GhM_A12G1330.1,GhM_D12G1266.1,GhM_A12G1331.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G19210 | ATRLI2, RLI2; ATRLI2; transporter | GO:0005215|transporter activity | GhM_A08G1997.1,GhM_D08G1945.1,GhM_A12G2549.1,GhM_D12G2435.1,GhM_D05G3207.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G18010 | IP5PII; AT5PTASE2 (MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2); inositol-polyphosphate 5-phosphatase | GO:0009845|seed germination;GO:0046855|inositol phosphate dephosphorylation;GO:0009737|response to abscisic acid stimulus;GO:0032957|inositol trisphosphate metabolic process;GO:0004445|inositol-polyphosphate 5-phosphatase activity | GhM_A08G2106.1,GhM_D08G2059.1,GhM_A12G2649.1,GhM_D05G2746.1,GhM_D12G2539.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G16780 | ATHB-2, HAT4, ATHB2; ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | GO:0009826|unidimensional cell growth;GO:0048364|root development;GO:0009735|response to cytokinin stimulus;GO:0010017|red or far-red light signaling pathway;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0010218|response to far red light;GO:0043565|sequence-specific DNA binding;GO:0042803|protein homodimerization activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009641|shade avoidance;GO:0016481|negative regulation of transcription;GO:0010016|shoot morphogenesis;GO:0008283|cell proliferation | GhM_A08G2191.1,GhM_D08G2147.1,GhM_A11G0312.1,GhM_D11G0297.1,GhM_A12G2698.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G47380 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2210.1,GhM_D08G2164.1,GhM_D12G2597.1,GhM_A12G2710.1,GhM_A12G2711.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G63020 | NRPD1A, POL IVA, SDE4, NRPD1, SMD2; NRPD1A (NUCLEAR RNA POLYMERASE D 1A); DNA binding / DNA-directed RNA polymerase | GO:0030422|production of siRNA involved in RNA interference;GO:0005634|nucleus;GO:0031047|gene silencing by RNA;GO:0000418|DNA-directed RNA polymerase IV complex;GO:0003899|DNA-directed RNA polymerase activity;GO:0006346|methylation-dependent chromatin silencing;GO:0003677|DNA binding;GO:0006350|transcription;GO:0016246|RNA interference;GO:0007267|cell-cell signaling;GO:0010495|long-distance posttranscriptional gene silencing | GhM_A08G2329.1,GhM_D08G2271.1,GhM_A11G0237.1,GhM_D11G0230.1,GhM_A11G0236.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G09820 | TT8; TT8 (TRANSPARENT TESTA 8); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003677|DNA binding;GO:0010023|proanthocyanidin biosynthetic process;GO:0003700|transcription factor activity;GO:0009813|flavonoid biosynthetic process;GO:0010026|trichome differentiation | GhM_A08G2420.1,GhM_D08G2365.1,GhM_A11G1434.1,GhM_D11G1427.1,GhM_A11G1436.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G49100 | signal recognition particle 9 kDa protein, putative / SRP9, putative | GO:0005515|protein binding;GO:0006614|SRP-dependent cotranslational protein targeting to membrane;GO:0048500|signal recognition particle;GO:0045900|negative regulation of translational elongation;GO:0008312|7S RNA binding;GO:0005047|signal recognition particle binding | GhM_A08G2449.1,GhM_D08G2399.1,GhM_A11G1501.1,GhM_D11G1489.1,GhM_A12G1959.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G26860 | LON_ARA_ARA, LON1; LON1 (LON PROTEASE 1); ATP binding / ATP-dependent peptidase/ serine-type peptidase | GO:0005515|protein binding;GO:0005739|mitochondrion;GO:0005829|cytosol;GO:0008236|serine-type peptidase activity;GO:0006508|proteolysis;GO:0005524|ATP binding | GhM_A08G2653.1,GhM_D08G2598.1,GhM_A11G3426.1,GhM_D11G3337.1,GhM_D09G0903.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G04650 | oxidoreductase | GO:0009507|chloroplast;GO:0016491|oxidoreductase activity | GhM_A08G2759.1,GhM_D08G2701.1,GhM_A13G0863.1,GhM_D01G0372.1,GhM_D05G2757.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G08530 | unknown protein | GO:0009507|chloroplast | GhM_A08G2788.1,GhM_D08G2732.1,GhM_A11G3025.1,GhM_D11G2952.1,GhM_A11G3024.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_A08G2805.1,GhM_D08G2754.1,GhM_A11G2869.1,GhM_D11G2819.1,GhM_D12G0365.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G03680 | C2 domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2812.1,GhM_D08G2761.1,GhM_A13G2168.1,GhM_D13G2052.1,GhM_A13G2169.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G17770 | ATCBR, CBR1; ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1); cytochrome-b5 reductase | GO:0009505|plant-type cell wall;GO:0022900|electron transport chain;GO:0004128|cytochrome-b5 reductase activity;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | GhM_A08G2819.1,GhM_D08G2768.1,GhM_A09G1355.1,GhM_D09G1273.1,GhM_D11G2251.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G11560 | catalytic | GO:0005886|plasma membrane;GO:0003824|catalytic activity;GO:0005773|vacuole;GO:0005783|endoplasmic reticulum | GhM_A08G3200.1,GhM_D08G3133.1,GhM_A13G2468.1,GhM_D13G2361.1,GhM_D06G1157.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G29320 | glucan phosphorylase, putative | GO:0009507|chloroplast;GO:0009536|plastid;GO:0009266|response to temperature stimulus;GO:0009570|chloroplast stroma;GO:0009414|response to water deprivation;GO:0016757|transferase activity, transferring glycosyl groups;GO:0004645|phosphorylase activity | GhM_A09G0123.1,GhM_D09G0122.1,GhM_A13G1005.1,GhM_D13G0915.1,GhM_A13G1006.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G52660 | myb family transcription factor | GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0046686|response to cadmium ion;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | GhM_A09G0511.1,GhM_A12G3132.1,GhM_A11G0143.1,GhM_D11G0139.1,GhM_D12G3017.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G52510 | scarecrow-like transcription factor 8 (SCL8) | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0005737|cytoplasm | GhM_A09G0513.1,GhM_D09G0560.1,GhM_A11G0133.1,GhM_D11G0129.1,GhM_D09G2117.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G23920 | BAM1, BMY7, TR-BAMY; BAM1 (BETA-AMYLASE 1); beta-amylase | GO:0016161|beta-amylase activity;GO:0005634|nucleus;GO:0005829|cytosol;GO:0005983|starch catabolic process;GO:0009414|response to water deprivation | GhM_A09G0854.1,GhM_D09G0796.1,GhM_A10G1237.1,GhM_Scaf010G116.1,GhM_D10G1882.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G06620 | protein kinase family protein | GO:0006468|protein amino acid phosphorylation;GO:0006355|regulation of transcription, DNA-dependent;GO:0007165|signal transduction;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0016301|kinase activity | GhM_A09G0924.1,GhM_D09G0859.1,GhM_A09G2854.1,GhM_A10G2175.1,GhM_D10G2102.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G79650 | RAD23; RAD23; damaged DNA binding | GO:0043130|ubiquitin binding;GO:0006284|base-excision repair;GO:0006289|nucleotide-excision repair;GO:0005634|nucleus;GO:0043161|proteasomal ubiquitin-dependent protein catabolic process;GO:0003684|damaged DNA binding;GO:0006464|protein modification process | GhM_A09G1039.1,GhM_D09G0974.1,GhM_A10G0540.1,GhM_D10G0514.1,GhM_D06G1834.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G49700||AT4G22810 | DNA-binding protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A09G1073.1,GhM_A09G1376.1,GhM_D09G1293.1,GhM_A09G1414.1,GhM_D09G1326.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G51710||AT3G21280 | UBP7; UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7); ubiquitin thiolesterase/ ubiquitin-specific protease||UBP6, ATUBP6; UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004221|ubiquitin thiolesterase activity;GO:0005516|calmodulin binding;GO:0016579|protein deubiquitination;GO:0006464|protein modification process;GO:0005575|cellular_component | GhM_A09G1090.1,GhM_D09G1025.1,GhM_A10G0682.1,GhM_D10G0659.1,GhM_D10G0660.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G79930 | HSP91; HSP91; ATP binding | GO:0005886|plasma membrane;GO:0046686|response to cadmium ion | GhM_A09G1116.1,GhM_D09G1045.1,GhM_A10G0887.1,GhM_D10G3010.1,GhM_Scaf046G177.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G06220 | MEE5; MEE5 (MATERNAL EFFECT EMBRYO ARREST 5); GTP binding / GTPase/ translation elongation factor/ translation factor, nucleic acid binding | GO:0005618|cell wall;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0003746|translation elongation factor activity;GO:0009793|embryonic development ending in seed dormancy;GO:0045694|regulation of embryo sac egg cell differentiation;GO:0008135|translation factor activity, nucleic acid binding;GO:0016607|nuclear speck;GO:0005886|plasma membrane | GhM_A09G1266.1,GhM_D09G1197.1,GhM_A13G2862.1,GhM_D13G2763.1,GhM_D04G1953.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G13370 | CHR5; CHR5 (chromatin remodeling 5); ATP binding / DNA binding / chromatin binding / helicase/ nucleic acid binding | GO:0005634|nucleus;GO:0006333|chromatin assembly or disassembly;GO:0003682|chromatin binding;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0000785|chromatin;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A09G1430.1,GhM_A13G2811.1,GhM_D13G2697.1,GhM_D09G1340.1,GhM_D09G1341.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G36810 | binding | GO:0008150|biological_process;GO:0005488|binding;GO:0009507|chloroplast | GhM_A09G1812.1,GhM_D09G1703.1,GhM_A11G4059.1,GhM_D11G3956.1,GhM_D10G2844.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G53190 | nodulin MtN3 family protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_A09G2021.1,GhM_D09G1923.1,GhM_A11G3771.1,GhM_A12G3088.1,GhM_D12G2973.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G51840 | ACX4, ATSCX, ATG6; ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase | GO:0005777|peroxisome;GO:0003997|acyl-CoA oxidase activity;GO:0046459|short-chain fatty acid metabolic process;GO:0009793|embryonic development ending in seed dormancy;GO:0006635|fatty acid beta-oxidation;GO:0016491|oxidoreductase activity | GhM_A09G2046.1,GhM_D09G1950.1,GhM_A13G1065.1,GhM_D13G1153.1,GhM_D13G1151.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G62790 | DXR, PDE129; DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase | GO:0009507|chloroplast;GO:0046686|response to cadmium ion;GO:0019288|isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0009570|chloroplast stroma;GO:0030604|1-deoxy-D-xylulose-5-phosphate reductoisomerase activity;GO:0008299|isoprenoid biosynthetic process | GhM_A09G2112.1,GhM_D09G2021.1,GhM_A11G0014.1,GhM_D11G0017.1,GhM_D11G0016.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18190 | GC2; GC2 (golgin candidate 2) | GO:0008150|biological_process;GO:0005794|Golgi apparatus;GO:0003674|molecular_function | GhM_A09G2140.1,GhM_A12G3288.1,GhM_D12G3175.1,GhM_D09G2054.1,GhM_D09G2053.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G18490 | aspartyl protease family protein | GO:0006508|proteolysis | GhM_A09G2169.1,GhM_A12G3252.1,GhM_D12G3139.1,GhM_D08G1185.1,GhM_D09G2083.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G18440 | peptidyl-tRNA hydrolase family protein | GO:0009507|chloroplast;GO:0004045|aminoacyl-tRNA hydrolase activity;GO:0006412|translation | GhM_A09G2170.1,GhM_D09G2084.1,GhM_A12G3251.1,GhM_D12G3138.1,GhM_D05G3783.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G06200 | guanylate kinase, putative | GO:0004385|guanylate kinase activity;GO:0009507|chloroplast;GO:0006163|purine nucleotide metabolic process | GhM_A09G2443.1,GhM_D09G2327.1,GhM_A10G1402.1,GhM_D10G1723.1,GhM_A10G1403.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G24180 | catalytic/ glucosylceramidase | GO:0004348|glucosylceramidase activity;GO:0006680|glucosylceramide catabolic process;GO:0003824|catalytic activity;GO:0006665|sphingolipid metabolic process;GO:0005886|plasma membrane | GhM_A09G2473.1,GhM_D09G2360.1,GhM_A10G1494.1,GhM_D10G1618.1,GhM_A10G1495.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G18910 | protein kinase family protein | GO:0005777|peroxisome;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A09G2835.1,GhM_D09G2710.1,GhM_A09G2836.1,GhM_A11G1477.1,GhM_D11G1466.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G18590 | kelch repeat-containing protein | GO:0008150|biological_process;GO:0005829|cytosol;GO:0003674|molecular_function | GhM_A09G2926.1,GhM_D09G2790.1,GhM_A10G2027.1,GhM_D10G1969.1,GhM_D09G2791.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G06590||AT3G17100 | transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009507|chloroplast;GO:0045449|regulation of transcription | GhM_A09G2931.1,GhM_D09G2795.1,GhM_A10G1381.1,GhM_A10G2188.1,GhM_D10G2117.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G61010 | ATEXO70E2; ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2); protein binding | GO:0006887|exocytosis | GhM_A09G2964.1,GhM_D09G2824.1,GhM_A12G2331.1,GhM_D12G2227.1,GhM_D12G0397.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_A10G0895.1,GhM_Scaf045G174.1,GhM_A10G0896.1,GhM_D10G2998.1,GhM_A10G0897.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G36760 | ATAPP1, APP1; ATAPP1; N-1-naphthylphthalamic acid binding / aminopeptidase | GO:0005886|plasma membrane;GO:0009926|auxin polar transport;GO:0010013|N-1-naphthylphthalamic acid binding | GhM_A10G1081.1,GhM_D10G1010.1,GhM_Scaf069G219.1,GhM_Scaf040G169.1,GhM_Scaf041G170.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G01280||AT1G27760 | SAT32, ATSAT32; interferon-related developmental regulator family protein / IFRD protein family||VDAC1, ATVDAC1; VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0005488|binding;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A10G1814.1,GhM_A13G0506.1,GhM_A10G2052.1,GhM_D13G0495.1,GhM_A11G2380.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G48930 | HCT; HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferase | GO:0009809|lignin biosynthetic process;GO:0010252|auxin homeostasis;GO:0016740|transferase activity;GO:0047205|quinate O-hydroxycinnamoyltransferase activity;GO:0047172|shikimate O-hydroxycinnamoyltransferase activity;GO:0005575|cellular_component;GO:0009963|positive regulation of flavonoid biosynthetic process | GhM_A10G1823.1,GhM_A10G1839.1,GhM_D10G1297.1,GhM_D10G1309.1,GhM_D06G2477.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G16130||AT1G16260||AT1G79670 | RFO1, WAKL22; RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase||WAKL2; WAKL2 (wall associated kinase-like 2); kinase||protein kinase family protein | GO:0012505|endomembrane system;GO:0009620|response to fungus;GO:0006468|protein amino acid phosphorylation;GO:0005618|cell wall;GO:0016301|kinase activity;GO:0016021|integral to membrane | GhM_A10G2311.1,GhM_D10G2236.1,GhM_D11G2516.1,GhM_A11G1665.1,GhM_D11G1651.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G12560||AT5G13820 | TRFL9, ATTBP2; TRFL9 (TRF-LIKE 9); DNA bending/ DNA binding / telomeric DNA binding||TBP1, ATBP-1, ATBP1, ATTBP1, HPPBF-1; TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding | GO:0000723|telomere maintenance;GO:0042162|telomeric DNA binding;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0008301|DNA bending activity;GO:0000781|chromosome, telomeric region;GO:0003677|DNA binding;GO:0003691|double-stranded telomeric DNA binding | GhM_A10G2803.1,GhM_D10G2766.1,GhM_A13G0226.1,GhM_D13G0210.1,GhM_A13G0225.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G36170 | ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A) | GO:0005515|protein binding;GO:0022625|cytosolic large ribosomal subunit;GO:0005730|nucleolus;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0006464|protein modification process | GhM_A11G0178.1,GhM_A12G3043.1,GhM_D09G1632.1,GhM_D11G0176.1,GhM_D12G2926.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G01575 | serine protease inhibitor, Kazal-type family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004867|serine-type endopeptidase inhibitor activity | GhM_A11G0189.1,GhM_D11G0187.1,GhM_A12G3016.1,GhM_Scaf049G193.1,GhM_D12G2902.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G62050 | OXA1, ATOXA1, OXA1AT; OXA1; P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0045039|protein import into mitochondrial inner membrane;GO:0005739|mitochondrion;GO:0006461|protein complex assembly;GO:0005743|mitochondrial inner membrane | GhM_A11G0283.1,GhM_D11G0272.1,GhM_A12G2921.1,GhM_D12G2809.1,GhM_A12G2986.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G74860||AT1G19010||AT1G51690 | unknown protein||ATB ALPHA; ATB ALPHA; nucleotide binding / protein phosphatase type 2A regulator | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0000166|nucleotide binding;GO:0000159|protein phosphatase type 2A complex;GO:0007165|signal transduction;GO:0008601|protein phosphatase type 2A regulator activity;GO:0005575|cellular_component | GhM_A11G0360.1,GhM_D11G0346.1,GhM_D08G1919.1,GhM_D06G1168.1,GhM_D13G1260.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G74360 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005739|mitochondrion;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A11G0412.1,GhM_D11G0395.1,GhM_A12G2298.1,GhM_D12G2190.1,GhM_D04G1134.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G60980 | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | GO:0003723|RNA binding;GO:0006810|transport;GO:0000166|nucleotide binding;GO:0006913|nucleocytoplasmic transport;GO:0005622|intracellular;GO:0003676|nucleic acid binding | GhM_A11G0419.1,GhM_D11G0403.1,GhM_A12G2334.1,GhM_D12G2230.1,GhM_D03G1183.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G66390 | peroxidase 72 (PER72) (P72) (PRXR8) | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0009055|electron carrier activity | GhM_A11G0531.1,GhM_D11G0517.1,GhM_A11G2102.1,GhM_D11G2079.1,GhM_D11G0680.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G65613 | - | - | GhM_A11G0604.1,GhM_A11G2473.1,GhM_D11G2421.1,GhM_A12G1095.1,GhM_D12G0955.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G16380||AT1G79400 | ATCHX1, CHX1; ATCHX1; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX2, CHX2; ATCHX2 (CATION/H+ EXCHANGER 2); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | GhM_A11G0851.1,GhM_D11G0868.1,GhM_A12G1257.1,GhM_D12G1195.1,GhM_A12G1258.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G00450 | CRP; CRP (CRYPTIC PRECOCIOUS) | GO:0009507|chloroplast;GO:0040034|regulation of development, heterochronic;GO:0048573|photoperiodism, flowering;GO:0003674|molecular_function | GhM_A11G1031.1,GhM_D12G1376.1,GhM_A12G1441.1,GhM_D11G1041.1,GhM_D11G1043.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G61650||AT5G05620 | TUBG1; TUBG1 (GAMMA-TUBULIN); GTP binding / GTPase/ structural molecule||TUBG2, ATGCP2, GCP2; GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2); GTP binding / GTPase/ structural molecule | GO:0000914|phragmoplast assembly;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0051641|cellular localization;GO:0000910|cytokinesis;GO:0046785|microtubule polymerization;GO:0005737|cytoplasm;GO:0005739|mitochondrion;GO:0007020|microtubule nucleation;GO:0048768|root hair cell tip growth;GO:0009553|embryo sac development;GO:0048366|leaf development;GO:0005886|plasma membrane;GO:0005198|structural molecule activity;GO:0005874|microtubule;GO:0010103|stomatal complex morphogenesis | GhM_A11G1099.1,GhM_D11G1112.1,GhM_A12G1463.1,GhM_D12G1400.1,GhM_A12G1464.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G61680 | lipase class 3 family protein | GO:0004806|triglyceride lipase activity;GO:0009507|chloroplast;GO:0006629|lipid metabolic process | GhM_A11G1119.1,GhM_D12G1410.1,GhM_A12G1472.1,GhM_D11G1130.1,GhM_D11G1129.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G46570 | LAC6; LAC6 (laccase 6); laccase | GO:0012505|endomembrane system;GO:0008471|laccase activity;GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0046274|lignin catabolic process | GhM_A11G1148.1,GhM_D11G1163.1,GhM_A11G1149.1,GhM_D12G1432.1,GhM_A12G1494.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G66460||AT1G02310 | (1-4)-beta-mannan endohydrolase, putative||glycosyl hydrolase family protein 5 / cellulase family protein / (1-4)-beta-mannan endohydrolase, putative | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | GhM_A11G1242.1,GhM_D11G1247.1,GhM_A12G1551.1,GhM_D12G1502.1,GhM_D12G1501.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G51550 | FER; FER (FERONIA); kinase/ protein kinase | GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0043680|filiform apparatus | GhM_A11G1828.1,GhM_D11G1818.1,GhM_A11G1839.1,GhM_D11G1829.1,GhM_D11G1831.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G49530 | SIN-like family protein | GO:0005634|nucleus;GO:0006350|transcription;GO:0003899|DNA-directed RNA polymerase activity | GhM_A11G2163.1,GhM_D11G2140.1,GhM_A11G2937.1,GhM_D11G2654.1,GhM_D11G2653.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G22250 | ATAAT, AAT, MEE17; aminotransferase class I and II family protein | GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0016769|transferase activity, transferring nitrogenous groups;GO:0030170|pyridoxal phosphate binding;GO:0004069|L-aspartate:2-oxoglutarate aminotransferase activity;GO:0009793|embryonic development ending in seed dormancy | GhM_A11G2338.1,GhM_D11G2567.1,GhM_A13G0313.1,GhM_D13G0299.1,GhM_A13G0314.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G22570 | ATNIC1, NIC1; NIC1 (NICOTINAMIDASE 1); catalytic/ nicotinamidase | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0009737|response to abscisic acid stimulus;GO:0008936|nicotinamidase activity;GO:0019365|pyridine nucleotide salvage;GO:0005575|cellular_component | GhM_A11G2450.1,GhM_D11G2435.1,GhM_D03G0376.1,GhM_D12G0189.1,GhM_A12G0180.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G49680 | ATBCAT-3, BCAT3; BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3); branched-chain-amino-acid transaminase/ catalytic | GO:0009081|branched chain family amino acid metabolic process;GO:0008152|metabolic process | GhM_A11G2514.1,GhM_D11G2377.1,GhM_D12G0984.1,GhM_A12G0875.1,GhM_A12G1058.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G23093 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49310.1); Has 251 Blast hits to 248 proteins in 89 species: Archae - 0; Bacteria - 66; Metazoa - 68; Fungi - 18; Plants - 79; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A11G2587.1,GhM_D11G2315.1,GhM_A12G0905.1,GhM_D12G1057.1,GhM_D13G1725.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G45400 | exostosin family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016020|membrane;GO:0003824|catalytic activity | GhM_A11G2815.1,GhM_D11G2780.1,GhM_D10G2823.1,GhM_A13G2163.1,GhM_D13G2047.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G19790 | RAP2.11; RAP2.11 (related to AP2 11); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A11G2899.1,GhM_D11G2855.1,GhM_A13G1345.1,GhM_D13G1248.1,GhM_D11G2856.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05010 | transmembrane protein, putative | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A11G2956.1,GhM_D11G2890.1,GhM_D06G1001.1,GhM_D07G2193.1,GhM_D10G2274.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G08650 | PPCK1; PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE); kinase/ protein serine/threonine kinase | GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity | GhM_A11G3109.1,GhM_D11G3041.1,GhM_A13G2253.1,GhM_Scaf047G183.1,GhM_D11G3112.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G41070||AT3G26932 | DRB3; DRB3 (dsRNA-binding protein 3); RNA binding / double-stranded RNA binding||DRB5; DRB5 (DSRNA-BINDING PROTEIN 5); double-stranded RNA binding | GO:0003725|double-stranded RNA binding;GO:0003723|RNA binding;GO:0005622|intracellular;GO:0008150|biological_process | GhM_A11G3231.1,GhM_D11G3153.1,GhM_D08G1024.1,GhM_A13G2298.1,GhM_D13G2185.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05170 | phosphoglycerate/bisphosphoglycerate mutase family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0003824|catalytic activity | GhM_A11G3295.1,GhM_D11G3215.1,GhM_A13G1465.1,GhM_D13G1354.1,GhM_Scaf008G102.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G54790 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process | GhM_A11G3300.1,GhM_D11G3220.1,GhM_A13G1467.1,GhM_Scaf008G101.1,GhM_D13G1356.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G27550 | ATP binding / microtubule motor | GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0005524|ATP binding | GhM_A11G3326.1,GhM_D11G3245.1,GhM_A11G3741.1,GhM_D11G3663.1,GhM_D08G1864.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G11880 | diaminopimelate decarboxylase, putative / DAP carboxylase, putative | GO:0009089|lysine biosynthetic process via diaminopimelate;GO:0008836|diaminopimelate decarboxylase activity;GO:0009507|chloroplast | GhM_A12G0474.1,GhM_D12G0323.1,GhM_A13G0372.1,GhM_D13G0356.1,GhM_Scaf118G275.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G34960 | CAT5; CAT5 (CATIONIC AMINO ACID TRANSPORTER 5); L-glutamate transmembrane transporter/ L-lysine transmembrane transporter/ arginine transmembrane transporter/ cationic amino acid transmembrane transporter | GO:0015189|L-lysine transmembrane transporter activity;GO:0005313|L-glutamate transmembrane transporter activity;GO:0015326|cationic amino acid transmembrane transporter activity;GO:0051938|L-glutamate import;GO:0043091|L-arginine import;GO:0015181|arginine transmembrane transporter activity;GO:0005886|plasma membrane | GhM_A12G0549.1,GhM_D12G0084.1,GhM_D12G0545.1,GhM_A12G0550.1,GhM_D12G0085.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G60670 | 60S ribosomal protein L12 (RPL12C) | GO:0022625|cytosolic large ribosomal subunit;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A13G0284.1,GhM_D13G0271.1,GhM_A13G2945.1,GhM_D09G1768.1,GhM_D13G2848.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G05040 | HST, HST1; HST (HASTY); nucleocytoplasmic transporter | GO:0048364|root development;GO:0009965|leaf morphogenesis;GO:0009944|polarity specification of adaxial/abaxial axis;GO:0048367|shoot development;GO:0005487|nucleocytoplasmic transporter activity;GO:0009910|negative regulation of flower development;GO:0005635|nuclear envelope;GO:0035281|pre-microRNA export from nucleus | GhM_A13G1447.1,GhM_D13G1343.1,GhM_A13G1448.1,GhM_D13G2190.1,GhM_A13G2302.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G49200||AT5G53390||AT3G49210 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A13G1579.1,GhM_D13G1456.1,GhM_A13G2190.1,GhM_D13G2076.1,GhM_A13G2191.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G36110 | CYP716A1; CYP716A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A13G1606.1,GhM_D13G1485.1,GhM_A13G1624.1,GhM_D13G1503.1,GhM_D10G2755.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G07040||AT3G14470 | RPM1, RPS3; RPM1 (RESISTANCE TO P. SYRINGAE PV MACULICOLA 1); nucleotide binding / protein binding||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0009626|plant-type hypersensitive response;GO:0006915|apoptosis;GO:0006952|defense response;GO:0005886|plasma membrane | GhM_A13G1623.1,GhM_D10G2753.1,GhM_D13G1500.1,GhM_D13G1501.1,GhM_D13G1502.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G01380 | catalytic/ transferase | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0006506|GPI anchor biosynthetic process;GO:0016740|transferase activity;GO:0005783|endoplasmic reticulum | GhM_D01G1250.1,GhM_D07G0776.1,GhM_D07G2160.1,GhM_D11G2994.1,GhM_D11G2551.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G15060||AT1G73750 | LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G73750.1); Has 120 Blast hits to 104 proteins in 29 species: Archae - 0; Bacteria - 61; Metazoa - 1; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).||EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15060.1); Has 121 Blast hits to 101 proteins in 28 species: Archae - 0; Bacteria - 44; Metazoa - 8; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | ;GO:0009507|chloroplast | GhM_D01G1294.1,GhM_D02G1247.1,GhM_D09G1386.1,GhM_D08G1177.1,GhM_D04G1339.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G34270 | TIP41-like family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D01G1591.1,GhM_D11G2354.1,GhM_D10G2387.1,GhM_D07G1950.1,GhM_D13G0476.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00580 | PSBE; PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized. | GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0016020|membrane | GhM_D01G2059.1,GhM_Scaf146G294.1,GhM_D04G2114.1,GhM_D08G1070.1,GhM_Scaf005G093.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D01G2479.1,GhM_D11G2310.1,GhM_D13G0866.1,GhM_D07G0997.1,GhM_D12G2305.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT4G38470||AT1G09760 | U2A'; U2A' (U2 small nuclear ribonucleoprotein A); protein binding||protein kinase family protein | GO:0005515|protein binding;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0015030|Cajal body;GO:0005634|nucleus;GO:0006468|protein amino acid phosphorylation;GO:0005737|cytoplasm;GO:0005730|nucleolus;GO:0000398|nuclear mRNA splicing, via spliceosome;GO:0005654|nucleoplasm;GO:0009409|response to cold | GhM_D02G1405.1,GhM_D11G2217.1,GhM_D07G1868.1,GhM_D13G0960.1,GhM_D13G0855.1 | 5 | 0 | Gossypium | Cotton | |||
| - | ATCG00820 | RPS19; Encodes a 6.8-kDa protein of the small ribosomal subunit. | GO:0009570|chloroplast stroma;GO:0009507|chloroplast | GhM_D02G1781.1,GhM_D02G2836.1,GhM_Scaf005G077.1,GhM_Scaf005G087.1,GhM_Scaf304G392.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT3G22200 | POP2, GABA-T, HER1; POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate:pyruvate transaminase | GO:0009860|pollen tube growth;GO:0003867|4-aminobutyrate transaminase activity;GO:0006979|response to oxidative stress;GO:0006540|glutamate decarboxylation to succinate;GO:0022621|shoot system development;GO:0009450|gamma-aminobutyric acid catabolic process;GO:0046686|response to cadmium ion;GO:0010183|pollen tube guidance;GO:0034387|4-aminobutyrate:pyruvate transaminase activity;GO:0019484|beta-alanine catabolic process;GO:0005739|mitochondrion;GO:0009865|pollen tube adhesion;GO:0005886|plasma membrane;GO:0010154|fruit development;GO:0008270|zinc ion binding;GO:0010033|response to organic substance;GO:0050897|cobalt ion binding | GhM_D03G0867.1,GhM_D05G3697.1,GhM_D04G1584.1,GhM_D12G1280.1,GhM_D11G2902.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G13440 | glucose-inhibited division family A protein | GO:0009507|chloroplast;GO:0050660|FAD binding;GO:0002098|tRNA wobble uridine modification;GO:0008033|tRNA processing | GhM_D03G0875.1,GhM_D12G1179.1,GhM_D07G0480.1,GhM_D10G0912.1,GhM_D07G1302.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT5G10360||AT4G31700||AT1G17720 | ATB BETA; ATB BETA; nucleotide binding / protein phosphatase type 2A regulator||RPS6; RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome||EMB3010; EMB3010 (embryo defective 3010); structural constituent of ribosome | GO:0022626|cytosolic ribosome;GO:0022627|cytosolic small ribosomal subunit;GO:0009507|chloroplast;GO:0006470|protein amino acid dephosphorylation;GO:0000166|nucleotide binding;GO:0009793|embryonic development ending in seed dormancy;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0008601|protein phosphatase type 2A regulator activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0000159|protein phosphatase type 2A complex | GhM_D03G1301.1,GhM_D05G2577.1,GhM_D05G3478.1,GhM_D06G1975.1,GhM_D05G3675.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT2G38700||AT3G54250 | MVD1, ATMVD1; MVD1 (MEVALONATE DIPHOSPHATE DECARBOXYLASE 1); diphosphomevalonate decarboxylase/ protein homodimerization||mevalonate diphosphate decarboxylase, putative | GO:0008610|lipid biosynthetic process;GO:0019287|isopentenyl diphosphate biosynthetic process, mevalonate pathway;GO:0005524|ATP binding;GO:0042803|protein homodimerization activity;GO:0016310|phosphorylation;GO:0004163|diphosphomevalonate decarboxylase activity;GO:0016301|kinase activity;GO:0008299|isoprenoid biosynthetic process;GO:0005575|cellular_component | GhM_D06G0524.1,GhM_D07G2671.1,GhM_D06G0821.1,GhM_D10G1586.1,GhM_D12G1442.1 | 5 | 0 | Gossypium | Cotton | |||
| - | AT1G79700||AT1G16060||AT2G41710 | ovule development protein, putative | GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0009887|organ morphogenesis;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0040008|regulation of growth;GO:0010187|negative regulation of seed germination | GhM_D07G2681.1,GhM_D10G1966.1,GhM_D10G2277.1,GhM_D11G2343.1,GhM_D13G0965.1 | 5 | 0 | Gossypium | Cotton | |||
| - | - | - | - | GhM_D08G0870.1,GhM_D08G1011.1,GhM_D13G0639.1,GhM_D09G1099.1,GhM_D12G1170.1 | 5 | 0 | Gossypium | Cotton | |||
| TA1073:GhM_A07G0975.1,GhM_A07G0977.1,GhM_A07G0979.1 | - | - | - | GhM_D07G0966.1,GhM_D07G0964.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1080:GhM_A07G2826.1,GhM_A07G2827.1,GhM_A07G2828.1 | AT3G16520 | UGT88A1; UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | GhM_D11G3643.1,GhM_D07G2735.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1117:GhM_A09G2300.1,GhM_A09G2302.1,GhM_A09G2303.1 | AT4G23990 | ATCSLG3, CSLG3; ATCSLG3; cellulose synthase/ transferase/ transferase, transferring glycosyl groups | GO:0016759|cellulose synthase activity;GO:0030244|cellulose biosynthetic process;GO:0000271|polysaccharide biosynthetic process;GO:0016740|transferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_D09G2202.1,GhM_A09G2301.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1125:GhM_Scaf020G135.1,GhM_Scaf020G136.1,GhM_Scaf020G137.1 | - | - | - | GhM_D10G0002.1,GhM_Scaf026G150.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1189:GhM_A10G2162.1,GhM_A10G2168.1 | AT2G23060||AT2G30090 | GCN5-related N-acetyltransferase (GNAT) family protein | GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0008080|N-acetyltransferase activity | GhM_A02G0618.1,GhM_D10G2094.1,GhM_D02G0612.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1198:GhM_A10G2396.1,GhM_A10G2401.1 | - | - | - | GhM_D10G2331.1,GhM_D10G2333.1,GhM_D10G2332.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1214:GhM_A10G2754.1,GhM_A10G2755.1 | AT5G13180 | ANAC083; ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_A01G0212.1,GhM_A13G0742.1,GhM_A13G0762.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1223:GhM_A10G2968.1,GhM_A10G2970.1 | AT3G55960 | NLI interacting factor (NIF) family protein | GO:0008150|biological_process;GO:0016791|phosphatase activity | GhM_D10G2919.1,GhM_D13G0176.1,GhM_A13G0187.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1224:GhM_A10G3024.1,GhM_A10G3025.1 | AT1G29050||AT2G42570 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005773|vacuole | GhM_A06G2092.1,GhM_D10G2969.1,GhM_D06G2074.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1257:GhM_A11G1360.1,GhM_A11G1365.1 | AT2G47820 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G0555.1,GhM_D11G1362.1,GhM_D08G0519.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1303:GhM_A11G3145.1,GhM_A11G3147.1 | AT2G37690 | phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative | GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0009555|pollen development;GO:0006189|'de novo' IMP biosynthetic process;GO:0004638|phosphoribosylaminoimidazole carboxylase activity;GO:0005524|ATP binding | GhM_A09G0217.1,GhM_D13G0359.1,GhM_D11G3073.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1341:GhM_A11G4012.1,GhM_A11G4016.1 | AT5G15870 | glycosyl hydrolase family 81 protein | GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0033903|endo-1,3(4)-beta-glucanase activity | GhM_A07G0874.1,GhM_D07G0876.1,GhM_D11G3902.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1351:GhM_A12G0189.1,GhM_A12G0190.1 | AT5G09590||AT4G37910 | mtHsc70-1; mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding||MTHSC70-2, HSC70-5; MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | GO:0005759|mitochondrial matrix;GO:0009507|chloroplast;GO:0009615|response to virus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0006457|protein folding;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0005524|ATP binding | GhM_A11G2482.1,GhM_D12G0197.1,GhM_D11G2411.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1353:GhM_A12G0236.1,GhM_A12G0240.1 | AT5G11230||AT2G15240 | organic anion transmembrane transporter||UNC-50 family protein | GO:0012505|endomembrane system;GO:0008514|organic anion transmembrane transporter activity;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A01G0113.1,GhM_D12G0246.1,GhM_D01G0093.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1372:GhM_A12G0808.1,GhM_A12G0811.1 | AT4G32730 | PC-MYB1, MYB3R-1, ATMYB3R-1, ATMYB3R1, MYB3R1; PC-MYB1; DNA binding / transcription coactivator/ transcription factor | GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003713|transcription coactivator activity;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A04G0954.1,GhM_A07G0308.1,GhM_D07G0308.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1379:GhM_A12G1000.1,GhM_A12G1002.1 | AT2G06850||AT5G13870 | EXGT-A4; EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||EXGT-A1, EXT; EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | GO:0009826|unidimensional cell growth;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0009505|plant-type cell wall;GO:0009507|chloroplast;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0009733|response to auxin stimulus;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0009612|response to mechanical stimulus;GO:0006073|cellular glucan metabolic process;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0005576|extracellular region;GO:0005618|cell wall;GO:0016020|membrane;GO:0009645|response to low light intensity stimulus | GhM_D12G0860.1,GhM_A11G0708.1,GhM_D11G0714.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1417:GhM_A12G2354.1,GhM_A12G2357.1 | AT1G24240||AT4G11630 | ribosomal protein L19 family protein | GO:0005840|ribosome;GO:0005622|intracellular;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0042254|ribosome biogenesis | GhM_A07G0685.1,GhM_D12G2250.1,GhM_D07G0677.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1419:GhM_A12G2356.1,GhM_A12G2359.1 | AT4G12690||AT2G04220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G0683.1,GhM_D12G2252.1,GhM_D07G0675.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1431:GhM_A12G2803.1,GhM_A12G2804.1 | AT4G25490||AT5G52020 | AP2 domain-containing protein||CBF1, DREB1B, ATCBF1; CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0050832|defense response to fungus;GO:0009631|cold acclimation;GO:0009409|response to cold | GhM_D12G2691.1,GhM_A08G2337.1,GhM_D12G2692.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1536:GhM_A13G2635.1,GhM_A13G2636.1 | AT5G20270||AT5G20260 | catalytic||HHP1; HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1); receptor | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0004872|receptor activity;GO:0003824|catalytic activity;GO:0009744|response to sucrose stimulus;GO:0009651|response to salt stress;GO:0016020|membrane;GO:0009725|response to hormone stimulus;GO:0016021|integral to membrane | GhM_D13G2540.1,GhM_A06G0624.1,GhM_D06G0619.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1549:GhM_D01G0076.1,GhM_D01G0077.1 | AT1G49670 | NQR; NQR; binding / catalytic/ oxidoreductase/ zinc ion binding | GO:0006979|response to oxidative stress;GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005739|mitochondrion;GO:0008270|zinc ion binding;GO:0016491|oxidoreductase activity | GhM_A01G0097.1,GhM_A13G0436.1,GhM_D13G0423.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1561:GhM_D01G0390.1,GhM_D01G0394.1 | - | - | - | GhM_A01G0403.1,GhM_D03G0171.1,GhM_D07G2627.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1576:GhM_D01G0723.1,GhM_D01G0726.1 | AT5G54510 | GH3.6, DFL1; DFL1 (DWARF IN LIGHT 1); indole-3-acetic acid amido synthetase | GO:0009826|unidimensional cell growth;GO:0009507|chloroplast;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0010279|indole-3-acetic acid amido synthetase activity;GO:0009734|auxin mediated signaling pathway;GO:0010252|auxin homeostasis | GhM_A01G0764.1,GhM_A03G2171.1,GhM_D02G2194.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1597:GhM_D01G1576.1,GhM_D01G1577.1 | AT3G11550 | integral membrane family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1607.1,GhM_A04G0743.1,GhM_D04G1188.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1600:GhM_D01G1730.1,GhM_D01G1731.1 | AT2G37870 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0008289|lipid binding;GO:0012505|endomembrane system;GO:0006869|lipid transport | GhM_A01G1743.1,GhM_A12G1993.1,GhM_D12G1904.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1666:GhM_D02G0748.1,GhM_D02G0749.1 | AT1G43700 | VIP1; VIP1 (VIRE2-INTERACTING PROTEIN 1); protein binding / transcription factor | GO:0005515|protein binding;GO:0005634|nucleus;GO:0009294|DNA mediated transformation;GO:0003700|transcription factor activity;GO:0051170|nuclear import | GhM_A02G0752.1,GhM_A05G3041.1,GhM_D05G3037.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1746:GhM_D03G0760.1,GhM_D03G0762.1 | AT1G44110 | CYCA1;1; CYCA1;1 (Cyclin A1;1); cyclin-dependent protein kinase regulator | GO:0051726|regulation of cell cycle;GO:0005634|nucleus;GO:0010583|response to cyclopentenone;GO:0005737|cytoplasm;GO:0016538|cyclin-dependent protein kinase regulator activity | GhM_A02G1383.1,GhM_A05G2656.1,GhM_D05G2667.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1758:GhM_D03G1204.1,GhM_D03G1206.1 | AT5G08139 | zinc finger (C3HC4-type RING finger) family protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A03G0967.1,GhM_A13G1333.1,GhM_A13G1334.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1800:GhM_D04G0242.1,GhM_D04G0244.1 | AT5G04550 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G1512.1,GhM_A05G4698.1,GhM_D01G1462.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1824:GhM_D04G1257.1,GhM_D04G1260.1 | AT2G36290 | hydrolase, alpha/beta fold family protein | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005783|endoplasmic reticulum | GhM_A01G1619.1,GhM_A04G0793.1,GhM_D01G1587.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1863:GhM_D04G2264.1,GhM_D04G2265.1 | AT1G10700||AT2G42910 | ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)||ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3) | GO:0000287|magnesium ion binding;GO:0009507|chloroplast;GO:0009156|ribonucleoside monophosphate biosynthetic process;GO:0009116|nucleoside metabolic process;GO:0005886|plasma membrane;GO:0044249|cellular biosynthetic process | GhM_A04G1790.1,GhM_A05G4518.1,GhM_D04G0430.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1898:GhM_D05G1082.1,GhM_D05G1084.1 | AT3G46430||AT3G14600 | unknown protein||60S ribosomal protein L18A (RPL18aC) | GO:0008150|biological_process;GO:0022626|cytosolic ribosome;GO:0003674|molecular_function;GO:0022625|cytosolic large ribosomal subunit;GO:0005750|mitochondrial respiratory chain complex III;GO:0005739|mitochondrion;GO:0006499|N-terminal protein myristoylation;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation;GO:0016020|membrane;GO:0042254|ribosome biogenesis | GhM_D03G1569.1,GhM_A03G0561.1,GhM_A05G1068.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1911:GhM_D05G1560.1,GhM_D05G1561.1 | AT3G14180 | transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A05G1548.1,GhM_A06G2494.1,GhM_D06G2492.1 | 5 | 1 | Gossypium | Cotton | |||
| TA194:GhM_A10G0067.1,GhM_A10G0068.1,GhM_A10G0069.1,GhM_A10G0070.1,GhM_A10G0071.1 | AT5G23960||AT3G14520 | ATTPS21, TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase||terpene synthase/cyclase family protein | GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0016106|sesquiterpenoid biosynthetic process;GO:0016829|lyase activity;GO:0051762|sesquiterpene biosynthetic process;GO:0005575|cellular_component | - | 5 | 1 | Gossypium | Cotton | |||
| TA1972:GhM_D05G3642.1,GhM_D05G3643.1 | AT5G14740 | CA2, CA18, BETA CA2; CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | GO:0042742|defense response to bacterium;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0004089|carbonate dehydratase activity;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0015976|carbon utilization;GO:0005829|cytosol;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | GhM_A03G1886.1,GhM_A05G3679.1,GhM_D02G1941.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1982:GhM_D05G3960.1,GhM_D05G3961.1 | AT3G27640 | transducin family protein / WD-40 repeat family protein | GO:0008150|biological_process;GO:0000166|nucleotide binding | GhM_A04G0413.1,GhM_A07G2856.1,GhM_D07G2761.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1987:GhM_D05G4084.1,GhM_D05G4090.1 | AT2G19950||AT4G33130 | GC1; GC1 (Golgin Candidate 1)||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: transcription factor (TAIR:AT3G13000.2); Has 77 Blast hits to 77 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005794|Golgi apparatus;GO:0003674|molecular_function | GhM_D01G1011.1,GhM_D04G0880.1,GhM_D04G1600.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1997:GhM_D05G4298.1,GhM_D05G4301.1 | AT5G55310 | TOP1BETA, TOP1; TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I | GO:0006265|DNA topological change;GO:0016020|membrane;GO:0003917|DNA topoisomerase type I activity | GhM_A04G0109.1,GhM_A11G3481.1,GhM_D11G3394.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2002:GhM_D06G0027.1,GhM_D06G0028.1 | AT4G24190 | SHD, HSP90.7; SHD (SHEPHERD); ATP binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0009934|regulation of meristem structural organization;GO:0005739|mitochondrion;GO:0005783|endoplasmic reticulum;GO:0006457|protein folding;GO:0009651|response to salt stress;GO:0010075|regulation of meristem growth;GO:0009414|response to water deprivation;GO:0009306|protein secretion;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding;GO:0005773|vacuole;GO:0009409|response to cold | GhM_A01G1211.1,GhM_A06G0033.1,GhM_D01G1184.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2007:GhM_D06G0102.1,GhM_D06G0103.1 | AT2G16250 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0009505|plant-type cell wall;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A01G1283.1,GhM_A06G0105.1,GhM_D01G1252.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2010:GhM_D06G0187.1,GhM_D06G0188.1 | AT1G18210 | calcium-binding protein, putative | GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A06G0179.1,GhM_A03G1097.1,GhM_D02G1007.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2014:GhM_D06G0299.1,GhM_D06G0323.1 | AT1G27530 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 183 Blast hits to 183 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G2968.1,GhM_A06G0310.1,GhM_D05G2974.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2022:GhM_D06G0486.1,GhM_D06G0487.1 | - | - | - | GhM_A09G1171.1,GhM_A12G0629.1,GhM_D12G0629.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2078:GhM_D06G2316.1,GhM_D06G2317.1 | AT3G12490 | ATCYSB; cysteine protease inhibitor, putative / cystatin, putative | GO:0012505|endomembrane system | GhM_A06G2312.1,GhM_A10G2410.1,GhM_D10G2338.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2147:GhM_A01G1335.1,GhM_A01G1337.1 | AT4G25000 | ATAMY1, AMY1; AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase | GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0048046|apoplast;GO:0004556|alpha-amylase activity;GO:0005576|extracellular region | GhM_D01G1308.1,GhM_A05G2269.1,GhM_D05G2286.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2187:GhM_A01G2579.1,GhM_A01G2580.1 | AT5G03610 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process | GhM_D01G2510.1,GhM_D09G2014.1,GhM_A09G2102.1 | 5 | 1 | Gossypium | Cotton | |||
| TA218:GhM_A13G0703.1,GhM_A13G0704.1,GhM_A13G0705.1,GhM_A13G0706.1,GhM_A13G0707.1 | AT2G25470||AT3G53240 | AtRLP45; AtRLP45 (Receptor Like Protein 45); protein binding||AtRLP21; AtRLP21 (Receptor Like Protein 21); protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0009507|chloroplast | - | 5 | 1 | Gossypium | Cotton | |||
| TA2192:GhM_A01G2696.1,GhM_A01G2697.1 | AT5G02790 | In2-1 protein, putative | GO:0046686|response to cadmium ion | GhM_D01G2625.1,GhM_D09G1887.1,GhM_A09G1988.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2196:GhM_A01G2813.1,GhM_A01G2814.1 | AT3G51860||AT2G38170 | CAX1, ATCAX1, RCI4; CAX1 (cation exchanger 1); calcium ion transmembrane transporter/ calcium:cation antiporter/ calcium:hydrogen antiporter||CAX3, ATHCX1, CAX1-LIKE, ATCAX3; CAX3 (CATION EXCHANGER 3); calcium:cation antiporter/ calcium:hydrogen antiporter/ cation:cation antiporter | GO:0006874|cellular calcium ion homeostasis;GO:0009624|response to nematode;GO:0006882|cellular zinc ion homeostasis;GO:0006814|sodium ion transport;GO:0006812|cation transport;GO:0006816|calcium ion transport;GO:0005774|vacuolar membrane;GO:0016020|membrane;GO:0005773|vacuole;GO:0010351|lithium ion transport;GO:0015369|calcium:hydrogen antiporter activity;GO:0015085|calcium ion transmembrane transporter activity;GO:0009651|response to salt stress;GO:0015491|cation:cation antiporter activity;GO:0009705|plant-type vacuole membrane;GO:0009631|cold acclimation;GO:0015368|calcium:cation antiporter activity;GO:0051592|response to calcium ion;GO:0006793|phosphorus metabolic process;GO:0030026|cellular manganese ion homeostasis | GhM_D01G2737.1,GhM_A09G2034.1,GhM_D09G1937.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2323:GhM_D08G1785.1,GhM_D08G1786.1 | AT3G60690 | auxin-responsive family protein | GO:0009733|response to auxin stimulus | GhM_A08G1836.1,GhM_A11G0921.1,GhM_D11G0937.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2363:GhM_D09G0040.1,GhM_D09G0041.1 | AT3G50120 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G4490.1,GhM_A09G0044.1,GhM_D04G0461.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2373:GhM_D09G0308.1,GhM_D09G0309.1 | AT5G40240||AT5G40230 | nodulin-related||nodulin MtN21 family protein | GO:0016020|membrane;GO:0003674|molecular_function | GhM_A09G0334.1,GhM_D09G0300.1,GhM_A09G0327.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2376:GhM_D09G0524.1,GhM_D09G0525.1 | - | - | - | GhM_A05G3442.1,GhM_A10G1239.1,GhM_D01G1030.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2391:GhM_D09G0992.1,GhM_D09G0994.1 | AT1G30090 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A09G1057.1,GhM_A10G0459.1,GhM_D10G0440.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2523:GhM_D10G2714.1,GhM_D10G2715.1 | - | - | - | GhM_A05G3388.1,GhM_A10G2781.1,GhM_A10G2782.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2525:GhM_D10G2776.1,GhM_D10G2777.1 | AT3G11430||AT5G06090 | ATGPAT5, GPAT5; GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase/ organic anion transmembrane transporter||ATGPAT7, GPAT7; GPAT7 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 7); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase | GO:0010345|suberin biosynthetic process;GO:0008152|metabolic process;GO:0008415|acyltransferase activity;GO:0003841|1-acylglycerol-3-phosphate O-acyltransferase activity;GO:0008514|organic anion transmembrane transporter activity | GhM_A05G4179.1,GhM_A10G2812.1,GhM_D04G0747.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2561:GhM_D11G0619.1,GhM_D11G0631.1 | AT4G08980 | F-box family protein (FBW2) | GO:0004842|ubiquitin-protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component | GhM_A02G1699.1,GhM_A11G0622.1,GhM_D03G0418.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2567:GhM_D11G0858.1,GhM_D11G0859.1 | AT3G02100 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | GhM_A11G0841.1,GhM_A11G1535.1,GhM_D11G1525.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2569:GhM_D11G0880.1,GhM_D11G0881.1 | AT5G47070||AT4G17660 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A08G0374.1,GhM_A11G0864.1,GhM_D08G0362.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2580:GhM_D11G1297.1,GhM_D11G1298.1 | AT3G62600 | ATERDJ3B; ATERDJ3B; heat shock protein binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0005788|endoplasmic reticulum lumen;GO:0006457|protein folding;GO:0005886|plasma membrane;GO:0031072|heat shock protein binding | GhM_A08G1621.1,GhM_A11G1299.1,GhM_D08G1574.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2636:GhM_D11G3225.1,GhM_D11G3226.1 | AT3G05200 | ATL6; ATL6; protein binding / zinc ion binding | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0010200|response to chitin | GhM_A11G3304.1,GhM_A13G2322.1,GhM_D13G2209.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2643:GhM_D11G3399.1,GhM_D11G3400.1 | AT5G18030 | auxin-responsive protein, putative | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | GhM_A02G1032.1,GhM_D02G1240.1,GhM_D02G1241.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2691:GhM_D12G0461.1,GhM_D12G0468.1 | AT2G14610 | PR1, PR 1, ATPR1; PR1 (PATHOGENESIS-RELATED GENE 1) | GO:0010266|response to vitamin B1;GO:0003674|molecular_function;GO:0009627|systemic acquired resistance;GO:0006952|defense response;GO:0009753|response to jasmonic acid stimulus;GO:0005576|extracellular region;GO:0005618|cell wall | GhM_A04G1503.1,GhM_A09G1311.1,GhM_A12G0335.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2699:GhM_D12G0960.1,GhM_D12G0961.1 | AT1G31860 | AT-IE, HISN2; AT-IE; phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP diphosphatase | GO:0004636|phosphoribosyl-ATP diphosphatase activity;GO:0009507|chloroplast;GO:0004635|phosphoribosyl-AMP cyclohydrolase activity;GO:0000105|histidine biosynthetic process | GhM_A09G0736.1,GhM_D01G2055.1,GhM_D09G0680.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2718:GhM_D12G1486.1,GhM_D12G1488.1 | AT1G01060 | LHY, LHY1; LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor | GO:0009739|response to gibberellin stimulus;GO:0009737|response to abscisic acid stimulus;GO:0045449|regulation of transcription;GO:0009733|response to auxin stimulus;GO:0046686|response to cadmium ion;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0048574|long-day photoperiodism, flowering;GO:0042752|regulation of circadian rhythm | GhM_A11G1192.1,GhM_A12G1539.1,GhM_D11G1198.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2721:GhM_D12G1581.1,GhM_D12G1582.1 | AT4G02030 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); BEST Arabidopsis thaliana protein match is: SEC5B (TAIR:AT1G21170.1); Has 386 Blast hits to 358 proteins in 130 species: Archae - 0; Bacteria - 5; Metazoa - 171; Fungi - 64; Plants - 54; Viruses - 4; Other Eukaryotes - 88 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G1290.1,GhM_A12G1633.1,GhM_D11G1288.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2728:GhM_D12G1782.1,GhM_D12G1784.1 | AT5G50780||AT4G24970 | ATP binding||ATP-binding region, ATPase-like domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0016020|membrane;GO:0005524|ATP binding | GhM_A10G0464.1,GhM_A12G1848.1,GhM_D10G0445.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2800:GhM_D13G1019.1,GhM_D13G1020.1 | AT3G44900 | ATCHX4, CHX4; ATCHX4 (CATION/H+ EXCHANGER 4); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | GhM_A07G0102.1,GhM_A13G1249.1,GhM_D07G0104.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2803:GhM_D13G1058.1,GhM_D13G1059.1 | AT1G64950||AT1G64940 | CYP89A5; CYP89A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP89A6; CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | GhM_A02G1502.1,GhM_A13G1302.1,GhM_D03G0622.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2840:GhM_D13G2245.1,GhM_D13G2249.1 | AT5G04920 | vacuolar protein sorting 36 family protein / VPS36 family protein | GO:0016192|vesicle-mediated transport;GO:0005215|transporter activity;GO:0000814|ESCRT II complex | GhM_A09G2999.1,GhM_A11G3905.1,GhM_D09G2854.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2848:GhM_D13G2418.1,GhM_D13G2424.1 | AT2G05840 | PAA2; PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0022626|cytosolic ribosome;GO:0005839|proteasome core complex;GO:0006511|ubiquitin-dependent protein catabolic process | GhM_A06G0924.1,GhM_A13G2513.1,GhM_D06G0932.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2874:GhM_A02G0137.1,GhM_A02G0139.1 | AT3G59470||AT2G43280 | far-red impaired responsive family protein / FAR1 family protein | GO:0005575|cellular_component;GO:0009639|response to red or far red light | GhM_D02G0142.1,GhM_D02G1276.1,GhM_A02G1051.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2891:GhM_A02G0519.1,GhM_A02G0523.1 | AT4G27500 | PPI1; PPI1 (PROTON PUMP INTERACTOR 1); protein binding | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0005783|endoplasmic reticulum;GO:0010155|regulation of proton transport | GhM_A10G1054.1,GhM_A10G0935.1,GhM_A02G0450.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2893:GhM_A02G0522.1,GhM_A02G0525.1 | AT5G18670 | BMY3, BAM9; BMY3; beta-amylase/ catalytic/ cation binding | GO:0016161|beta-amylase activity;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding;GO:0000272|polysaccharide catabolic process;GO:0030244|cellulose biosynthetic process | GhM_D02G0511.1,GhM_D10G1946.1,GhM_A10G1185.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2939:GhM_A02G1923.1,GhM_A02G1931.1 | AT4G37830 | cytochrome c oxidase-related | GO:0005739|mitochondrion;GO:0004129|cytochrome-c oxidase activity | GhM_D03G0338.1,GhM_A11G2506.1,GhM_D11G2384.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2976:GhM_A03G0600.1,GhM_A03G0603.1 | AT4G33650||AT3G13760||AT3G45530 | DC1 domain-containing protein||ADL2, DRP3A; DRP3A (DYNAMIN-RELATED PROTEIN 3A); GTP binding / GTPase/ phosphoinositide binding | GO:0005515|protein binding;GO:0009941|chloroplast envelope;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0005525|GTP binding;GO:0003924|GTPase activity;GO:0035091|phosphoinositide binding;GO:0009658|chloroplast organization;GO:0005739|mitochondrion;GO:0005829|cytosol;GO:0009791|post-embryonic development;GO:0000266|mitochondrial fission;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0016559|peroxisome fission | GhM_D03G1520.1,GhM_A03G0591.1,GhM_D03G1519.1 | 5 | 1 | Gossypium | Cotton | |||
| TA2992:GhM_A03G1071.1,GhM_A03G1073.1 | AT3G18210 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0019538|protein metabolic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D02G1171.1,GhM_A06G1522.1,GhM_D06G1551.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3018:GhM_A03G2017.1,GhM_A03G2018.1 | AT1G12060 | ATBAG5; ATBAG5 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 5); protein binding | GO:0005515|protein binding;GO:0042981|regulation of apoptosis;GO:0005575|cellular_component;GO:0006915|apoptosis | GhM_D02G2058.1,GhM_D10G2814.1,GhM_A07G1040.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3041:GhM_A04G0025.1,GhM_A04G0026.1 | AT1G55740 | AtSIP1; AtSIP1 (Arabidopsis thaliana seed imbibition 1); hydrolase, hydrolyzing O-glycosyl compounds | GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005575|cellular_component | GhM_D05G4395.1,GhM_A13G1760.1,GhM_D13G1636.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3052:GhM_A04G0246.1,GhM_A04G0250.1 | AT5G54260 | MRE11, ATMRE11; MRE11 (meiotic recombination 11); endonuclease/ exonuclease/ hydrolase/ manganese ion binding / protein serine/threonine phosphatase | GO:0006259|DNA metabolic process;GO:0016787|hydrolase activity;GO:0006302|double-strand break repair;GO:0005634|nucleus;GO:0030145|manganese ion binding;GO:0004527|exonuclease activity;GO:0004519|endonuclease activity;GO:0004722|protein serine/threonine phosphatase activity | GhM_D05G4140.1,GhM_D01G0698.1,GhM_A04G0247.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3140:GhM_A05G0994.1,GhM_A05G0995.1 | AT2G29590 | thioesterase family protein | GO:0008150|biological_process;GO:0016788|hydrolase activity, acting on ester bonds;GO:0005777|peroxisome;GO:0016291|acyl-CoA thioesterase activity | GhM_A03G0663.1,GhM_D05G1011.1,GhM_D03G1443.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3187:GhM_A05G2806.1,GhM_A05G2807.1 | AT1G72020 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D05G2807.1,GhM_D09G1391.1,GhM_D05G2824.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3203:GhM_A05G3330.1,GhM_A05G3334.1 | AT3G10390 | FLD; FLD (FLOWERING LOCUS D); amine oxidase/ electron carrier/ oxidoreductase | GO:0016575|histone deacetylation;GO:0009055|electron carrier activity;GO:0009507|chloroplast;GO:0008131|amine oxidase activity;GO:0009911|positive regulation of flower development;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0016491|oxidoreductase activity | GhM_D05G3311.1,GhM_D06G2205.1,GhM_A06G2230.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3230:GhM_A05G4319.1,GhM_A05G4320.1 | AT2G04690 | cellular repressor of E1A-stimulated genes (CREG) family | GO:0008150|biological_process;GO:0010181|FMN binding;GO:0005773|vacuole | GhM_D04G0618.1,GhM_D07G2703.1,GhM_A07G2798.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3231:GhM_A05G4381.1,GhM_A05G4385.1 | AT3G28970 | AAR3; AAR3 (antiauxin-resistant 3) | GO:0005634|nucleus;GO:0009734|auxin mediated signaling pathway;GO:0003674|molecular_function | GhM_D04G0558.1,GhM_A11G0804.1,GhM_D11G0823.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3234:GhM_A05G4429.1,GhM_A05G4430.1 | AT5G39280||AT2G40610 | ATEXPA23, ATEXP23, ATHEXP ALPHA 1.17; ATEXPA23 (ARABIDOPSIS THALIANA EXPANSIN A23)||ATEXPA8, EXP8, ATEXP8, ATHEXP ALPHA 1.11; ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) | GO:0009826|unidimensional cell growth;GO:0012505|endomembrane system;GO:0009828|plant-type cell wall loosening;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0005576|extracellular region;GO:0006949|syncytium formation | GhM_D04G0515.1,GhM_D13G0922.1,GhM_A13G0996.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3274:GhM_A06G0428.1,GhM_A06G0433.1 | AT1G22180||AT4G08690 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | GO:0008150|biological_process;GO:0006810|transport;GO:0003674|molecular_function;GO:0005215|transporter activity;GO:0005575|cellular_component | GhM_A05G2563.1,GhM_D06G0454.1,GhM_D05G2575.1 | 5 | 1 | Gossypium | Cotton | |||
| TA330:GhM_A11G2199.1,GhM_A11G2200.1,GhM_A11G2201.1,GhM_A11G2202.1 | AT4G31970||AT4G31950||AT4G31940 | CYP82C2; CYP82C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP82C3; CYP82C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP82C4; CYP82C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D11G2174.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3321:GhM_A06G2207.1,GhM_A06G2208.1 | AT2G35800 | mitochondrial substrate carrier family protein | GO:0009941|chloroplast envelope;GO:0006810|transport;GO:0005509|calcium ion binding;GO:0005488|binding;GO:0005743|mitochondrial inner membrane | GhM_A01G1526.1,GhM_D06G2187.1,GhM_D01G1447.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3334:GhM_A06G2414.1,GhM_A06G2415.1 | AT1G52570 | PLDALPHA2; PLDALPHA2 (phosphlipase d alpha 2); phospholipase D | GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0004630|phospholipase D activity;GO:0046470|phosphatidylcholine metabolic process | GhM_D06G2414.1,GhM_A10G0825.1,GhM_D10G0816.1 | 5 | 1 | Gossypium | Cotton | |||
| TA340:GhM_A12G2221.1,GhM_A12G2222.1,GhM_A12G2224.1,GhM_A12G2225.1 | AT1G18880||AT5G62680||AT3G47960 | proton-dependent oligopeptide transport (POT) family protein | GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_D12G2131.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3411:GhM_A07G2668.1,GhM_A07G2672.1 | AT1G75670 | DNA-directed RNA polymerase/ RNA binding | GO:0003723|RNA binding;GO:0006350|transcription;GO:0005575|cellular_component;GO:0003899|DNA-directed RNA polymerase activity | GhM_A02G1060.1,GhM_A09G0165.1,GhM_D02G1094.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3439:GhM_A08G0621.1,GhM_A08G0623.1 | AT3G25410 | bile acid:sodium symporter family protein | GO:0009507|chloroplast;GO:0008508|bile acid:sodium symporter activity;GO:0006814|sodium ion transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A07G2540.1,GhM_D07G2443.1,GhM_D08G0589.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3449:GhM_A08G0965.1,GhM_A08G0966.1 | AT4G02380 | SAG21, AtLEA5; SAG21 (SENESCENCE-ASSOCIATED GENE 21) | GO:0006979|response to oxidative stress;GO:0042631|cellular response to water deprivation;GO:0003674|molecular_function;GO:0000302|response to reactive oxygen species;GO:0009790|embryonic development;GO:0009409|response to cold | GhM_A08G0545.1,GhM_D08G0923.1,GhM_D08G0511.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3460:GhM_A08G1599.1,GhM_A08G1600.1 | AT1G02930||AT2G47730 | ATGSTF6, GST1, ERD11, ATGSTF3, GSTF6; ATGSTF6 (GLUTATHIONE S-TRANSFERASE); copper ion binding / glutathione binding / glutathione transferase||ATGSTF8, ATGSTF5, GST6, GSTF8; ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8); glutathione binding / glutathione transferase | GO:0009941|chloroplast envelope;GO:0046686|response to cadmium ion;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005886|plasma membrane;GO:0050897|cobalt ion binding;GO:0006950|response to stress;GO:0006979|response to oxidative stress;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion;GO:0009570|chloroplast stroma;GO:0006952|defense response;GO:0005618|cell wall;GO:0043295|glutathione binding;GO:0005773|vacuole;GO:0005737|cytoplasm;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0010319|stromule;GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0009579|thylakoid;GO:0042742|defense response to bacterium;GO:0009409|response to cold | GhM_D08G1553.1,GhM_A12G0103.1,GhM_D12G0112.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3462:GhM_A08G1670.1,GhM_A08G1671.1 | AT5G63140 | ATPAP29, PAP29; ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29); acid phosphatase/ protein serine/threonine phosphatase | GO:0012505|endomembrane system;GO:0004722|protein serine/threonine phosphatase activity;GO:0003993|acid phosphatase activity | GhM_D08G1625.1,GhM_D09G0212.1,GhM_D09G0211.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3489:GhM_A08G2820.1,GhM_A08G2821.1 | AT1G33110||AT1G33090 | MATE efflux family protein | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | GhM_D08G2769.1,GhM_A13G1319.1,GhM_D13G1239.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3500:GhM_A08G3116.1,GhM_A08G3120.1 | AT2G19950 | GC1; GC1 (Golgin Candidate 1) | GO:0008150|biological_process;GO:0005794|Golgi apparatus;GO:0003674|molecular_function | GhM_D08G3047.1,GhM_A08G3117.1,GhM_D06G0789.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3504:GhM_A09G0004.1,GhM_A09G0013.1 | AT3G02060 | DEAD/DEAH box helicase, putative | GO:0009507|chloroplast;GO:0006355|regulation of transcription, DNA-dependent;GO:0003676|nucleic acid binding;GO:0003700|transcription factor activity;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_D09G0002.1,GhM_A09G0005.1,GhM_A09G0006.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3510:GhM_A09G0161.1,GhM_A09G0166.1 | AT5G15270 | KH domain-containing protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A05G4396.1,GhM_D09G0163.1,GhM_D04G0548.1 | 5 | 1 | Gossypium | Cotton | |||
| TA3532:GhM_A09G0850.1,GhM_A09G0851.1 | AT4G13430 | IIL1; IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase | GO:0016836|hydro-lyase activity;GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0051539|4 iron, 4 sulfur cluster binding;GO:0046686|response to cadmium ion;GO:0009570|chloroplast stroma;GO:0016829|lyase activity | GhM_D09G0792.1,GhM_D09G2653.1,GhM_A09G2777.1 | 5 | 1 | Gossypium | Cotton | |||
| TA385:GhM_D05G0294.1,GhM_D05G0296.1,GhM_D05G0298.1,GhM_D05G0299.1 | AT5G56590 | glycosyl hydrolase family 17 protein | GO:0009505|plant-type cell wall;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0046658|anchored to plasma membrane;GO:0043169|cation binding;GO:0005886|plasma membrane | GhM_A05G0285.1 | 5 | 1 | Gossypium | Cotton | |||
| TA420:GhM_D08G2491.1,GhM_D08G2493.1,GhM_D08G2494.1,GhM_D08G2497.1 | - | - | - | GhM_A08G2560.1 | 5 | 1 | Gossypium | Cotton | |||
| TA430:GhM_D09G1094.1,GhM_D09G1095.1,GhM_D09G1096.1,GhM_D09G1097.1 | AT2G27880 | AGO5; AGO5 (ARGONAUTE 5); nucleic acid binding | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | GhM_A09G1166.1 | 5 | 1 | Gossypium | Cotton | |||
| TA443:GhM_D10G2848.1,GhM_D10G2851.1,GhM_D10G2853.1,GhM_D10G2854.1 | AT1G07080 | gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0005773|vacuole | GhM_A13G1701.1 | 5 | 1 | Gossypium | Cotton | |||
| TA454:GhM_D12G2473.1,GhM_D12G2475.1,GhM_D12G2476.1,GhM_D12G2477.1 | AT5G45480||AT5G45530||AT5G45470 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0003674|molecular_function | GhM_A12G2588.1 | 5 | 1 | Gossypium | Cotton | |||
| TA459:GhM_D13G0077.1,GhM_D13G0078.1,GhM_D13G0079.1,GhM_D13G0080.1 | AT5G03980||AT1G28570 | GDSL-motif lipase/hydrolase family protein||GDSL-motif lipase, putative | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0006114|glycerol biosynthetic process;GO:0004091|carboxylesterase activity;GO:0016298|lipase activity | GhM_A13G0074.1 | 5 | 1 | Gossypium | Cotton | |||
| TA470:GhM_D13G2741.1,GhM_D13G2752.1,GhM_D13G2757.1,GhM_D13G2758.1 | AT1G75660||AT5G03620||AT5G42540||AT5G59190 | XRN3; XRN3; 5'-3' exoribonuclease||XRN2; XRN2 (EXORIBONUCLEASE 2); 5'-3' exonuclease/ 5'-3' exoribonuclease/ nucleic acid binding||subtilase family protein | GO:0012505|endomembrane system;GO:0008409|5'-3' exonuclease activity;GO:0004252|serine-type endopeptidase activity;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0042802|identical protein binding;GO:0003676|nucleic acid binding;GO:0043086|negative regulation of catalytic activity;GO:0006508|proteolysis;GO:0005575|cellular_component;GO:0004534|5'-3' exoribonuclease activity | GhM_D06G0490.1 | 5 | 1 | Gossypium | Cotton | |||
| TA475:GhM_A02G2091.1,GhM_A02G2093.1,GhM_A02G2097.1,GhM_A02G2098.1 | AT2G18630||AT5G66670||AT5G66675 | unknown protein | GO:0008150|biological_process;GO:0005777|peroxisome;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component | GhM_D03G0169.1 | 5 | 1 | Gossypium | Cotton | |||
| TA490:GhM_A04G1702.1,GhM_A04G1705.1,GhM_A04G1713.1,GhM_A04G1714.1 | - | - | - | GhM_D04G2185.1 | 5 | 1 | Gossypium | Cotton | |||
| TA510:GhM_A07G2339.1,GhM_A07G2340.1,GhM_A07G2341.1,GhM_A07G2342.1 | AT3G51550 | FER; FER (FERONIA); kinase/ protein kinase | GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0043680|filiform apparatus | GhM_D07G2275.1 | 5 | 1 | Gossypium | Cotton | |||
| TA528:GhM_A09G1100.1,GhM_A09G1101.1,GhM_A09G1104.1,GhM_A09G1105.1 | AT3G16230||AT3G16175||AT2G29590 | RNA binding / catalytic||thioesterase family protein | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0016070|RNA metabolic process;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0045449|regulation of transcription;GO:0016788|hydrolase activity, acting on ester bonds;GO:0016291|acyl-CoA thioesterase activity;GO:0005739|mitochondrion;GO:0005575|cellular_component | GhM_D09G1035.1 | 5 | 1 | Gossypium | Cotton | |||
| TA541:GhM_A10G1559.1,GhM_A10G1561.1,GhM_A10G1562.1 | AT2G15080||AT3G05370||AT3G11010||AT1G47890 | AtRLP7; AtRLP7 (Receptor Like Protein 7); kinase/ protein binding||AtRLP19; AtRLP19 (Receptor Like Protein 19); kinase/ protein binding||AtRLP31; AtRLP31 (Receptor Like Protein 31); kinase/ protein binding||AtRLP34; AtRLP34 (Receptor Like Protein 34); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0005575|cellular_component | GhM_A02G0232.1,GhM_D10G1563.1 | 5 | 1 | Gossypium | Cotton | |||
| TA564:GhM_A10G2862.1,GhM_A10G2874.1,GhM_A10G2875.1 | AT1G22370||AT1G22400 | AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups||UGT85A1, ATUGT85A1; UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_D10G2841.1,GhM_A10G2866.1 | 5 | 1 | Gossypium | Cotton | |||
| TA603:GhM_A12G0881.1,GhM_A12G0882.1,GhM_A12G0883.1 | AT4G30380||AT2G18660 | EXLB3; EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)||EXLB2; EXLB2 (EXPANSIN-LIKE B2 PRECURSOR) | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005576|extracellular region;GO:0005618|cell wall | GhM_A06G1748.1,GhM_D06G1701.1 | 5 | 1 | Gossypium | Cotton | |||
| TA651:GhM_D01G0937.1,GhM_D01G0941.1,GhM_D01G0942.1 | AT5G55830 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | GhM_A13G1792.1,GhM_D13G1669.1 | 5 | 1 | Gossypium | Cotton | |||
| TA657:GhM_D01G2022.1,GhM_D01G2023.1,GhM_D01G2024.1 | AT4G34880 | amidase family protein | GO:0012505|endomembrane system;GO:0019256|acrylonitrile catabolic process;GO:0019330|aldoxime metabolic process;GO:0004040|amidase activity;GO:0016884|carbon-nitrogen ligase activity, with glutamine as amido-N-donor | GhM_A01G2052.1,GhM_A01G2056.1 | 5 | 1 | Gossypium | Cotton | |||
| TA668:GhM_D02G0252.1,GhM_D02G0271.1,GhM_D02G0272.1 | AT1G04840||AT5G06540 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0254.1,GhM_A05G0598.1 | 5 | 1 | Gossypium | Cotton | |||
| TA686:GhM_D03G1522.1,GhM_D03G1525.1,GhM_D03G1531.1 | AT1G67730 | YBR159, KCR1; YBR159; ketoreductase/ oxidoreductase | GO:0045703|ketoreductase activity;GO:0018454|acetoacetyl-CoA reductase activity;GO:0009790|embryonic development;GO:0042335|cuticle development;GO:0042761|very-long-chain fatty acid biosynthetic process;GO:0016020|membrane;GO:0005783|endoplasmic reticulum;GO:0016491|oxidoreductase activity | GhM_A03G0590.1,GhM_A03G0599.1 | 5 | 1 | Gossypium | Cotton | |||
| TA740:GhM_D05G4001.1,GhM_D05G4003.1,GhM_D05G4004.1 | AT5G41170||AT1G12300||AT1G12700 | pentatricopeptide (PPR) repeat-containing protein||helicase domain-containing protein / pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003676|nucleic acid binding;GO:0004386|helicase activity;GO:0005524|ATP binding | GhM_A05G2996.1,GhM_A10G1595.1 | 5 | 1 | Gossypium | Cotton | |||
| TA786:GhM_A01G1373.1,GhM_A01G1377.1,GhM_A01G1380.1 | AT5G58610 | PHD finger transcription factor, putative | GO:0012505|endomembrane system;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006499|N-terminal protein myristoylation;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0008270|zinc ion binding;GO:0008080|N-acetyltransferase activity | GhM_A01G1375.1,GhM_D01G1349.1 | 5 | 1 | Gossypium | Cotton | |||
| TA817:GhM_D08G0229.1,GhM_D08G0231.1,GhM_D08G0232.1 | AT1G71390||AT2G15080 | AtRLP11; AtRLP11 (Receptor Like Protein 11); protein binding||AtRLP19; AtRLP19 (Receptor Like Protein 19); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity | GhM_A08G0286.1,GhM_D08G0276.1 | 5 | 1 | Gossypium | Cotton | |||
| TA851:GhM_D10G0179.1,GhM_D10G0185.1,GhM_D10G0186.1 | AT3G25820||AT1G61680 | ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase||TPS14, ATTPS14; TPS14 (TERPENE SYNTHASE 14); S-linalool synthase | GO:0009536|plastid;GO:0016099|monoterpenoid biosynthetic process;GO:0043693|monoterpene biosynthetic process;GO:0034007|S-linalool synthase activity;GO:0050551|myrcene synthase activity | GhM_A10G0191.1,GhM_A10G0195.1 | 5 | 1 | Gossypium | Cotton | |||
| TA857:GhM_D10G1318.1,GhM_D10G1320.1,GhM_D10G1321.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_A02G0088.1,GhM_A10G1815.1 | 5 | 1 | Gossypium | Cotton | |||
| TA880:GhM_D11G0248.1,GhM_D11G0249.1,GhM_D11G0250.1 | AT1G63840||AT3G61460 | zinc finger (C3HC4-type RING finger) family protein||BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009737|response to abscisic acid stimulus;GO:0010200|response to chitin;GO:0009741|response to brassinosteroid stimulus;GO:0008270|zinc ion binding | GhM_A11G0253.1,GhM_A11G0254.1 | 5 | 1 | Gossypium | Cotton | |||
| TA978:GhM_A03G2765.1,GhM_A03G2769.1,GhM_A03G2770.1 | - | - | - | GhM_D02G2775.1,GhM_D02G2774.1 | 5 | 1 | Gossypium | Cotton | |||
| TA1030:GhM_A05G2746.1,GhM_A05G2747.1,GhM_A05G2748.1;TA1832:GhM_D04G1633.1,GhM_D04G1634.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA1060:GhM_A06G1587.1,GhM_A06G1590.1,GhM_A06G1591.1;TA2050:GhM_D06G1656.1,GhM_D06G1658.1 | AT2G33775||AT1G28270 | RALFL4; RALFL4 (ralf-like 4); signal transducer||RALFL19; RALFL19 (ralf-like 19); signal transducer | GO:0007267|cell-cell signaling;GO:0004871|signal transducer activity;GO:0048046|apoplast | - | 5 | 2 | Gossypium | Cotton | |||
| TA1069:GhM_A07G0720.1,GhM_A07G0722.1,GhM_A07G0723.1;TA2216:GhM_D07G0714.1,GhM_D07G0715.1 | AT1G74100||AT1G18590 | SOT17, ATSOT17, ATST5C; SOT17 (SULFOTRANSFERASE 17); desulfoglucosinolate sulfotransferase/ sulfotransferase||SOT16, ATSOT16, CORI-7, ATST5A; SOT16 (SULFOTRANSFERASE 16); desulfoglucosinolate sulfotransferase/ sulfotransferase | GO:0019761|glucosinolate biosynthetic process;GO:0032260|response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance;GO:0008146|sulfotransferase activity;GO:0047364|desulfoglucosinolate sulfotransferase activity;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA1076:GhM_A07G1678.1,GhM_A07G1680.1,GhM_A07G1681.1;TA2241:GhM_D07G1644.1,GhM_D07G1646.1 | AT5G53390||AT3G49200 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA1077:GhM_A07G1922.1,GhM_A07G1923.1,GhM_A07G1924.1;TA2248:GhM_D07G1873.1,GhM_D07G1874.1 | AT5G17580||AT3G44820||AT3G03510 | phototropic-responsive NPH3 family protein||protein binding / signal transducer | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004871|signal transducer activity;GO:0009416|response to light stimulus;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA1081:GhM_A07G2862.1,GhM_A07G2864.1,GhM_A07G2865.1;TA2285:GhM_D07G2767.1,GhM_D07G2768.1 | AT2G16890 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups | - | 5 | 2 | Gossypium | Cotton | |||
| TA1085:GhM_A08G0166.1,GhM_A08G0168.1,GhM_A08G0169.1;TA2291:GhM_D08G0156.1,GhM_D08G0157.1 | AT5G25610 | RD22; RD22; nutrient reservoir | GO:0012505|endomembrane system;GO:0009737|response to abscisic acid stimulus;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity;GO:0009269|response to desiccation | - | 5 | 2 | Gossypium | Cotton | |||
| TA1089:GhM_A08G0981.1,GhM_A08G0986.1,GhM_A08G0987.1;TA2309:GhM_D08G0944.1,GhM_D08G0945.1 | AT5G13000 | ATGSL12, gsl12; ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | GO:0006075|1,3-beta-glucan biosynthetic process;GO:0003843|1,3-beta-glucan synthase activity;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0000148|1,3-beta-glucan synthase complex | - | 5 | 2 | Gossypium | Cotton | |||
| TA1090:GhM_A08G0991.1,GhM_A08G0995.1,GhM_A08G0997.1;TA2310:GhM_D08G0950.1,GhM_D08G0951.1 | AT5G19890||AT5G06730||AT5G06720 | peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0005634|nucleus;GO:0020037|heme binding;GO:0005737|cytoplasm;GO:0004601|peroxidase activity;GO:0005886|plasma membrane;GO:0009055|electron carrier activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA1096:GhM_A08G2096.1,GhM_A08G2097.1,GhM_A08G2098.1;TA2330:GhM_D08G2051.1,GhM_D08G2052.1 | AT2G32440 | KAO2, CYP88A4; KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding | GO:0009686|gibberellin biosynthetic process;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0051777|ent-kaurenoate oxidase activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA1097:GhM_A08G2188.1,GhM_A08G2189.1,GhM_A08G2190.1;TA2331:GhM_D08G2145.1,GhM_D08G2146.1 | AT3G46800||AT2G21830||AT2G28270||AT4G01910 | DC1 domain-containing protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA1114:GhM_A09G1995.1,GhM_A09G1997.1,GhM_A09G1998.1;TA2422:GhM_D09G1897.1,GhM_D09G1898.1 | AT3G09270 | ATGSTU8; ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | GO:0046686|response to cadmium ion;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm | - | 5 | 2 | Gossypium | Cotton | |||
| TA1182:GhM_A10G1848.1,GhM_A10G1850.1;TA2473:GhM_D10G1289.1,GhM_D10G1290.1 | AT5G05340||AT5G58390 | peroxidase, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0009055|electron carrier activity | GhM_D09G2484.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1227:GhM_A11G0073.1,GhM_A11G0074.1;TA2539:GhM_D11G0076.1,GhM_D11G0078.1 | AT1G18460 | lipase family protein | GO:0006114|glycerol biosynthetic process;GO:0016298|lipase activity;GO:0006629|lipid metabolic process | GhM_D11G0077.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1231:GhM_A11G0417.1,GhM_A11G0422.1;TA2547:GhM_D11G0400.1,GhM_D11G0404.1 | AT5G07970||AT5G07980 | dentin sialophosphoprotein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A12G1820.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1273:GhM_A11G2157.1,GhM_A11G2158.1;TA2604:GhM_D11G2129.1,GhM_D11G2131.1 | AT4G09190||AT5G49610 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D11G2130.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1288:GhM_A11G2745.1,GhM_A11G2746.1;TA2615:GhM_D11G2723.1,GhM_D11G2726.1 | AT5G17540 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component | GhM_A01G0009.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1323:GhM_A11G3644.1,GhM_A11G3645.1;TA2653:GhM_D11G3552.1,GhM_D11G3554.1 | AT3G58860||AT3G14920 | unknown protein||F-box family protein | GO:0008150|biological_process;GO:0009505|plant-type cell wall;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_D11G3553.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1329:GhM_A11G3734.1,GhM_A11G3735.1;TA2659:GhM_D11G3655.1,GhM_D11G3657.1 | AT1G09070 | SRC2, (AT)SRC2; SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding | GO:0000326|protein storage vacuole;GO:0005515|protein binding;GO:0006623|protein targeting to vacuole;GO:0005783|endoplasmic reticulum | GhM_D11G3656.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1354:GhM_A12G0253.1,GhM_A12G0254.1;TA2682:GhM_D12G0263.1,GhM_D12G0265.1 | AT3G14240||AT4G34980||AT5G67360 | subtilase family protein||ARA12; ARA12; serine-type endopeptidase||SLP2; SLP2; serine-type peptidase | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0048046|apoplast;GO:0042802|identical protein binding;GO:0010214|seed coat development;GO:0005576|extracellular region;GO:0043086|negative regulation of catalytic activity;GO:0005618|cell wall;GO:0006508|proteolysis;GO:0016020|membrane;GO:0048359|mucilage metabolic process during seed coat development | GhM_D12G0264.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1359:GhM_A12G0423.1,GhM_A12G0426.1;TA2689:GhM_D12G0369.1,GhM_D12G0374.1 | AT2G16640 | ATTOC132, TOC132; TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132); transmembrane receptor | GO:0004888|transmembrane receptor activity;GO:0016020|membrane;GO:0009707|chloroplast outer membrane;GO:0045036|protein targeting to chloroplast | GhM_A03G2634.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1367:GhM_A12G0547.1,GhM_A12G0548.1;TA2694:GhM_D12G0542.1,GhM_D12G0543.1 | AT3G21780 | UGT71B6; UGT71B6 (UDP-glucosyl transferase 71B6); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008194|UDP-glycosyltransferase activity;GO:0009737|response to abscisic acid stimulus;GO:0006970|response to osmotic stress;GO:0010294|abscisic acid glucosyltransferase activity;GO:0009651|response to salt stress;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0046345|abscisic acid catabolic process | GhM_D12G0083.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1393:GhM_A12G1375.1,GhM_A12G1376.1;TA2712:GhM_D12G1318.1,GhM_D12G1319.1 | AT4G22756||AT4G12110 | SMO1-2, ATSMO1, ATSMO1-2, SMO1; SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic||SMO1-1, ATSMO1, ATSMO1-1; SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic | GO:0000254|C-4 methylsterol oxidase activity;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0016126|sterol biosynthetic process | GhM_D06G1071.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1403:GhM_A12G1770.1,GhM_A12G1776.1;TA2725:GhM_D12G1721.1,GhM_D12G1723.1 | AT1G03940 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_A12G1775.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1443:GhM_A12G3185.1,GhM_A12G3187.1;TA2759:GhM_D12G3070.1,GhM_D12G3073.1 | AT1G12740 | CYP87A2; CYP87A2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D12G3071.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1457:GhM_A13G0160.1,GhM_A13G0162.1;TA2769:GhM_D13G0155.1,GhM_D13G0156.1 | AT1G13750||AT5G50400 | ATPAP27, PAP27; PAP27 (PURPLE ACID PHOSPHATASE 27); acid phosphatase/ protein serine/threonine phosphatase||calcineurin-like phosphoesterase family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0003993|acid phosphatase activity;GO:0046872|metal ion binding;GO:0004722|protein serine/threonine phosphatase activity | GhM_A13G0161.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1472:GhM_A13G0636.1,GhM_A13G0637.1;TA2788:GhM_D13G0729.1,GhM_D13G0730.1 | AT4G15955||AT1G52870||AT4G02340||AT4G03410 | peroxisomal membrane protein-related||epoxide hydrolase, putative||epoxide hydrolase-related | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0003674|molecular_function;GO:0004301|epoxide hydrolase activity;GO:0005575|cellular_component;GO:0016021|integral to membrane | GhM_D13G0728.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1520:GhM_A13G2183.1,GhM_A13G2184.1;TA2830:GhM_D13G2067.1,GhM_D13G2069.1 | AT5G54160||AT1G77530 | O-methyltransferase family 2 protein||ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0005829|cytosol;GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0005886|plasma membrane;GO:0047763|caffeate O-methyltransferase activity | GhM_D13G2068.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1551:GhM_D01G0132.1,GhM_D01G0133.1;TA2096:GhM_A01G0159.1,GhM_A01G0161.1 | AT1G02170||AT5G64240 | LOL3, ATMCPB1, MCP1B, AMC1, ATMC1; AMC1 (METACASPASE 1); cysteine-type endopeptidase||AtMC3; AtMC3 (metacaspase 3); cysteine-type endopeptidase | GO:0006508|proteolysis;GO:0009507|chloroplast | GhM_A01G0160.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1565:GhM_D01G0453.1,GhM_D01G0454.1;TA3601:GhM_Scaf112G268.1,GhM_Scaf112G269.1 | AT1G17020 | SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0010260|organ senescence;GO:0009813|flavonoid biosynthetic process;GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005575|cellular_component | GhM_A01G0466.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1614:GhM_D01G2250.1,GhM_D01G2252.1;TA2182:GhM_A01G2298.1,GhM_A01G2299.1 | AT1G58025 | DNA binding | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0005575|cellular_component | GhM_A12G0488.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1633:GhM_D02G0048.1,GhM_D02G0049.1;TA2869:GhM_A02G0039.1,GhM_A02G0040.1 | AT5G01880 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A10G1874.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1636:GhM_D02G0078.1,GhM_D02G0080.1;TA2872:GhM_A02G0070.1,GhM_A02G0072.1 | AT1G05690||AT5G67480 | BT3; BT3 (BTB AND TAZ DOMAIN PROTEIN 3); protein binding / transcription regulator||BT4, ATBT4; BT4 (BTB AND TAZ DOMAIN PROTEIN 4); protein binding / transcription regulator | GO:0005515|protein binding;GO:0030528|transcription regulator activity;GO:0009507|chloroplast;GO:0009739|response to gibberellin stimulus;GO:0009555|pollen development;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0009553|embryo sac development;GO:0005886|plasma membrane | GhM_A05G3728.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1652:GhM_D02G0420.1,GhM_D02G0422.1;TA2887:GhM_A02G0413.1,GhM_A02G0414.1 | AT4G14430 | IBR10, ATECI2, ECI2, ECHIB, PEC12; IBR10 (INDOLE-3-BUTYRIC ACID RESPONSE 10); catalytic/ dodecenoyl-CoA delta-isomerase | GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0009062|fatty acid catabolic process;GO:0004165|dodecenoyl-CoA delta-isomerase activity | GhM_D02G0421.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1659:GhM_D02G0568.1,GhM_D02G0584.1;TA1660:GhM_D02G0570.1,GhM_D02G0577.1 | AT3G57770 | protein kinase, putative | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A02G0581.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1669:GhM_D02G0799.1,GhM_D02G0802.1;TA2899:GhM_A02G0806.1,GhM_A02G0807.1 | AT5G56790 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A05G2693.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1695:GhM_D02G1923.1,GhM_D02G1924.1;TA3013:GhM_A03G1865.1,GhM_A03G1867.1 | AT1G10660 | unknown protein | GO:0012505|endomembrane system | GhM_D05G3626.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1699:GhM_D02G2156.1,GhM_D02G2158.1;TA3019:GhM_A03G2135.1,GhM_A03G2137.1 | AT2G20830 | folic acid binding / transferase | GO:0005542|folic acid binding;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_D02G2157.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1717:GhM_D03G0005.1,GhM_D03G0007.1;TA2951:GhM_A02G2266.1,GhM_A02G2269.1 | AT1G20925||AT2G17500 | auxin efflux carrier family protein | GO:0012505|endomembrane system;GO:0009926|auxin polar transport;GO:0016021|integral to membrane;GO:0009672|auxin:hydrogen symporter activity | GhM_D07G2121.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1724:GhM_D03G0161.1,GhM_D03G0162.1;TA2945:GhM_A02G2106.1,GhM_A02G2108.1 | AT5G66730 | zinc finger (C2H2 type) family protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_A02G2107.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1747:GhM_D03G0819.1,GhM_D03G0823.1;TA2918:GhM_A02G1606.1,GhM_A02G1632.1 | AT1G52820||AT1G52800 | 2-oxoglutarate-dependent dioxygenase, putative||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A02G1589.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1759:GhM_D03G1236.1,GhM_D03G1238.1;TA2991:GhM_A03G1009.1,GhM_A03G1011.1 | AT5G24960||AT3G57520||AT3G48320 | CYP71A14; CYP71A14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||AtSIP2; AtSIP2 (Arabidopsis thaliana seed imbibition 2); hydrolase, hydrolyzing O-glycosyl compounds||CYP71A21; CYP71A21; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A03G1012.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1768:GhM_D03G1506.1,GhM_D03G1507.1;TA2977:GhM_A03G0614.1,GhM_A03G0615.1 | AT5G02230||AT5G59480 | haloacid dehalogenase-like hydrolase family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0003824|catalytic activity | GhM_A08G0064.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1810:GhM_D04G0622.1,GhM_D04G0623.1;TA3229:GhM_A05G4312.1,GhM_A05G4313.1 | AT3G01420 | ALPHA-DOX1, DOX1, DIOX1; DOX1; lipoxygenase | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0006629|lipid metabolic process;GO:0001561|fatty acid alpha-oxidation;GO:0008219|cell death;GO:0016165|lipoxygenase activity;GO:0009751|response to salicylic acid stimulus;GO:0051707|response to other organism | GhM_D04G2399.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1815:GhM_D04G0777.1,GhM_D04G0778.1;TA3224:GhM_A05G4147.1,GhM_A05G4149.1 | AT3G11340||AT1G22370||AT1G22360 | AtUGT85A2; AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A05G4148.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1834:GhM_D04G1652.1,GhM_D04G1654.1;TA3083:GhM_A04G1178.1,GhM_A04G1179.1 | AT5G46230||AT4G24130 | unknown protein | GO:0008150|biological_process;GO:0005634|nucleus;GO:0005575|cellular_component | GhM_D04G1651.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1856:GhM_D04G2141.1,GhM_D04G2142.1;TA3103:GhM_A04G1655.1,GhM_A04G1656.1 | AT1G21200 | transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_D04G2140.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1884:GhM_D05G0598.1,GhM_D05G0600.1;TA3129:GhM_A05G0577.1,GhM_A05G0579.1 | AT5G48930 | HCT; HCT (HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE); quinate O-hydroxycinnamoyltransferase/ shikimate O-hydroxycinnamoyltransferase/ transferase | GO:0009809|lignin biosynthetic process;GO:0010252|auxin homeostasis;GO:0016740|transferase activity;GO:0047205|quinate O-hydroxycinnamoyltransferase activity;GO:0047172|shikimate O-hydroxycinnamoyltransferase activity;GO:0005575|cellular_component;GO:0009963|positive regulation of flavonoid biosynthetic process | GhM_A06G2486.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1902:GhM_D05G1262.1,GhM_D05G1263.1;TA3146:GhM_A05G1244.1,GhM_A05G1245.1 | AT1G30680 | toprim domain-containing protein | GO:0006259|DNA metabolic process;GO:0006260|DNA replication;GO:0003676|nucleic acid binding;GO:0003678|DNA helicase activity;GO:0005524|ATP binding | GhM_D05G1264.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1908:GhM_D05G1420.1,GhM_D05G1421.1;TA3150:GhM_A05G1407.1,GhM_A05G1408.1 | AT3G04730||AT3G15540 | IAA16; IAA16; transcription factor||IAA19, MSG2; IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19); transcription factor | GO:0009630|gravitropism;GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0009638|phototropism;GO:0003700|transcription factor activity | GhM_D06G2427.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1930:GhM_D05G2211.1,GhM_D05G2212.1;TA3169:GhM_A05G2186.1,GhM_A05G2187.1 | AT1G75130 | CYP721A1; CYP721A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A01G1297.1 | 5 | 2 | Gossypium | Cotton | |||
| TA1944:GhM_D05G2707.1,GhM_D05G2708.1;TA3184:GhM_A05G2707.1,GhM_A05G2708.1 | AT5G13930 | CHS, TT4, ATCHS; TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | GO:0010224|response to UV-B;GO:0006979|response to oxidative stress;GO:0016210|naringenin-chalcone synthase activity;GO:0031540|regulation of anthocyanin biosynthetic process;GO:0005634|nucleus;GO:0009926|auxin polar transport;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus;GO:0009813|flavonoid biosynthetic process;GO:0009629|response to gravity;GO:0009705|plant-type vacuole membrane;GO:0005783|endoplasmic reticulum;GO:0009715|chalcone biosynthetic process | GhM_D05G2697.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2038:GhM_D06G1187.1,GhM_D06G1190.1;TA3294:GhM_A06G1159.1,GhM_A06G1162.1 | AT1G80710 | transducin family protein / WD-40 repeat family protein | GO:0009737|response to abscisic acid stimulus;GO:0000166|nucleotide binding;GO:0009414|response to water deprivation | GhM_D06G1188.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2059:GhM_D06G2015.1,GhM_D06G2017.1;TA3311:GhM_A06G2031.1,GhM_A06G2033.1 | AT4G12560 | F-box family protein | GO:0005634|nucleus;GO:0031348|negative regulation of defense response;GO:0005737|cytoplasm;GO:0003674|molecular_function | GhM_D13G0814.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2061:GhM_D06G2046.1,GhM_D06G2047.1;TA3313:GhM_A06G2065.1,GhM_A06G2066.1 | AT4G16380 | metal ion binding | GO:0005575|cellular_component | GhM_D10G0078.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2091:GhM_D06G2662.1,GhM_D06G2663.1;TA3346:GhM_A06G2674.1,GhM_A06G2675.1 | AT3G24120||AT2G01060||AT1G79260 | unknown protein||myb family transcription factor | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_D03G1065.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2246:GhM_D07G1742.1,GhM_D07G1745.1;TA3386:GhM_A07G1781.1,GhM_A07G1783.1 | AT4G25420||AT5G07200 | GA5, GA20OX1, AT2301, ATGA20OX1; GA20OX1; gibberellin 20-oxidase||YAP169, GA20OX3, ATGA20OX3; YAP169; gibberellin 20-oxidase | GO:0009826|unidimensional cell growth;GO:0009686|gibberellin biosynthetic process;GO:0009739|response to gibberellin stimulus;GO:0048575|short-day photoperiodism, flowering;GO:0009908|flower development;GO:0005737|cytoplasm;GO:0009740|gibberellic acid mediated signaling pathway;GO:0005575|cellular_component;GO:0045544|gibberellin 20-oxidase activity | GhM_D07G1743.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2271:GhM_D07G2434.1,GhM_D07G2435.1;TA3405:GhM_A07G2530.1,GhM_A07G2533.1 | AT3G07520||AT5G48400||AT5G48410 | ATGLR1.3, GLR1.3; ATGLR1.3; intracellular ligand-gated ion channel||ATGLR1.4, GLR1.4; GLR1.4 (GLUTAMATE RECEPTOR 1.4); cation channel/ intracellular ligand-gated ion channel||ATGLR1.2, GLR1.2; ATGLR1.2; intracellular ligand-gated ion channel | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0030003|cellular cation homeostasis;GO:0005261|cation channel activity;GO:0009416|response to light stimulus;GO:0005217|intracellular ligand-gated ion channel activity;GO:0006874|cellular calcium ion homeostasis;GO:0016020|membrane | GhM_A07G2531.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2305:GhM_D08G0690.1,GhM_D08G0691.1;TA3442:GhM_A08G0723.1,GhM_A08G0725.1 | AT1G28710||AT1G28700 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D11G1301.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2346:GhM_D08G2652.1,GhM_D08G2653.1;TA3486:GhM_A08G2713.1,GhM_A08G2714.1 | AT1G54850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54840.1); Has 35 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005730|nucleolus | GhM_A11G3746.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2351:GhM_D08G2780.1,GhM_D08G2784.1;TA3490:GhM_A08G2833.1,GhM_A08G2838.1 | AT5G22810 | GDSL-motif lipase, putative | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0004091|carboxylesterase activity;GO:0016298|lipase activity | GhM_A07G1280.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2386:GhM_D09G0877.1,GhM_D09G0879.1;TA3535:GhM_A09G0938.1,GhM_A09G0943.1 | AT3G13300 | VCS; VCS (VARICOSE); nucleotide binding / protein homodimerization | GO:0009965|leaf morphogenesis;GO:0005634|nucleus;GO:0000166|nucleotide binding;GO:0042803|protein homodimerization activity;GO:0006402|mRNA catabolic process;GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA;GO:0005829|cytosol;GO:0000932|cytoplasmic mRNA processing body | GhM_A02G1120.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2396:GhM_D09G1132.1,GhM_D09G1133.1;TA3543:GhM_A09G1200.1,GhM_A09G1201.1 | AT5G58620 | zinc finger (CCCH-type) family protein | GO:0012505|endomembrane system;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_D07G1234.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2400:GhM_D09G1297.1,GhM_D09G1298.1;TA3549:GhM_A09G1379.1,GhM_A09G1380.1 | AT5G60520||AT5G60530 | late embryogenesis abundant protein-related / LEA protein-related | GO:0012505|endomembrane system;GO:0003674|molecular_function | GhM_D07G1404.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2416:GhM_D09G1724.1,GhM_D09G1727.1;TA3566:GhM_A09G1831.1,GhM_A09G1832.1 | AT4G05160 | 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative | GO:0009695|jasmonic acid biosynthetic process;GO:0005777|peroxisome;GO:0016207|4-coumarate-CoA ligase activity;GO:0004321|fatty-acyl-CoA synthase activity | GhM_Scaf212G333.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2432:GhM_D09G2390.1,GhM_D09G2391.1;TA3580:GhM_A09G2507.1,GhM_A09G2508.1 | AT4G36220||AT5G07990||AT3G26330 | FAH1, CYP84A1; FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase||CYP71B37; CYP71B37; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||TT7, CYP75B1, D501; TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding | GO:0046424|ferulate 5-hydroxylase activity;GO:0020037|heme binding;GO:0009411|response to UV;GO:0005783|endoplasmic reticulum;GO:0016711|flavonoid 3'-monooxygenase activity;GO:0009809|lignin biosynthetic process;GO:0019825|oxygen binding;GO:0009813|flavonoid biosynthetic process;GO:0005506|iron ion binding;GO:0010224|response to UV-B;GO:0004497|monooxygenase activity;GO:0009699|phenylpropanoid biosynthetic process;GO:0009055|electron carrier activity | GhM_A09G2491.1 | 5 | 2 | Gossypium | Cotton | |||
| TA2436:GhM_D09G2548.1,GhM_D09G2549.1;TA3587:GhM_A09G2669.1,GhM_A09G2670.1 | AT3G22600 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0008289|lipid binding;GO:0031225|anchored to membrane;GO:0006869|lipid transport | GhM_D02G2341.1 | 5 | 2 | Gossypium | Cotton | |||
| TA3509:GhM_A09G0149.1,GhM_A09G0151.1;TA3599:GhM_Scaf008G096.1,GhM_Scaf008G099.1 | - | - | - | GhM_D09G0148.1 | 5 | 2 | Gossypium | Cotton | |||
| TA3585:GhM_A09G2649.1,GhM_A09G2650.1;TA3586:GhM_A09G2661.1,GhM_A09G2663.1 | AT5G60060||AT5G67040 | unknown protein||F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D09G2532.1 | 5 | 2 | Gossypium | Cotton | |||
| TA538:GhM_A10G0703.1,GhM_A10G0709.1,GhM_A10G0711.1;TA2459:GhM_D10G0683.1,GhM_D10G0689.1 | AT1G51850||AT4G29990||AT2G19210 | leucine-rich repeat protein kinase, putative||light repressible receptor protein kinase | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA562:GhM_A10G2710.1,GhM_A10G2711.1,GhM_A10G2713.1;TA2519:GhM_D10G2650.1,GhM_D10G2651.1 | AT2G39490 | F-box family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA575:GhM_A11G1524.1,GhM_A11G1525.1,GhM_A11G1526.1;TA2589:GhM_D11G1512.1,GhM_D11G1513.1 | AT4G08300||AT4G08290||AT5G07050||AT1G75500 | LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT2G40900.1); Has 2288 Blast hits to 2270 proteins in 280 species: Archae - 23; Bacteria - 774; Metazoa - 5; Fungi - 0; Plants - 641; Viruses - 0; Other Eukaryotes - 845 (source: NCBI BLink).||nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0005886|plasma membrane;GO:0016020|membrane | - | 5 | 2 | Gossypium | Cotton | |||
| TA581:GhM_A11G2876.1,GhM_A11G2877.1,GhM_A11G2878.1;TA2619:GhM_D11G2831.1,GhM_D11G2833.1 | AT2G32300||AT1G48940||AT1G45063 | plastocyanin-like domain-containing protein||copper ion binding / electron carrier||UCC1; UCC1 (UCLACYANIN 1); copper ion binding / electron carrier | GO:0031225|anchored to membrane;GO:0005507|copper ion binding;GO:0012505|endomembrane system;GO:0009055|electron carrier activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA590:GhM_A11G3530.1,GhM_A11G3531.1,GhM_A11G3532.1;TA2647:GhM_D11G3451.1,GhM_D11G3454.1 | AT4G27290 | ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA598:GhM_A12G0288.1,GhM_A12G0289.1,GhM_A12G0290.1;TA2684:GhM_D12G0293.1,GhM_D12G0294.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA617:GhM_A12G3311.1,GhM_A12G3312.1,GhM_A12G3313.1;TA2762:GhM_D12G3197.1,GhM_D12G3198.1 | AT1G73500||AT1G18350 | ATMKK9, MKK9; MKK9 (MAP KINASE KINASE 9); MAP kinase kinase/ kinase/ protein kinase activator||ATMKK7, BUD1, MKK7; ATMKK7; MAP kinase kinase/ kinase | GO:0009693|ethylene biosynthetic process;GO:0009873|ethylene mediated signaling pathway;GO:0030295|protein kinase activator activity;GO:0046777|protein amino acid autophosphorylation;GO:0010120|camalexin biosynthetic process;GO:0009926|auxin polar transport;GO:0009611|response to wounding;GO:0005739|mitochondrion;GO:0045941|positive regulation of transcription;GO:0002229|defense response to oomycetes;GO:0009651|response to salt stress;GO:0004708|MAP kinase kinase activity;GO:0016301|kinase activity;GO:0042742|defense response to bacterium;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway | - | 5 | 2 | Gossypium | Cotton | |||
| TA621:GhM_A13G0316.1,GhM_A13G0317.1,GhM_A13G0318.1;TA2775:GhM_D13G0302.1,GhM_D13G0304.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA653:GhM_D01G1042.1,GhM_D01G1043.1,GhM_D01G1044.1;TA2140:GhM_A01G1074.1,GhM_A01G1075.1 | AT1G55790 | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | GO:0006432|phenylalanyl-tRNA aminoacylation;GO:0000166|nucleotide binding;GO:0005737|cytoplasm;GO:0006412|translation;GO:0004826|phenylalanine-tRNA ligase activity;GO:0005524|ATP binding | - | 5 | 2 | Gossypium | Cotton | |||
| TA654:GhM_D01G1493.1,GhM_D01G1494.1,GhM_D01G1495.1;TA2152:GhM_A01G1483.1,GhM_A01G1485.1 | AT2G41790 | peptidase M16 family protein / insulinase family protein | GO:0003824|catalytic activity;GO:0006508|proteolysis;GO:0046872|metal ion binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA675:GhM_D02G2338.1,GhM_D02G2339.1,GhM_D02G2342.1;TA3024:GhM_A03G2311.1,GhM_A03G2312.1 | AT1G17840 | WBC11, ABCG11, DSO, COF1, ATWBC11; WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11); ATPase, coupled to transmembrane movement of substances / fatty acid transporter | GO:0009897|external side of plasma membrane;GO:0015908|fatty acid transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005886|plasma membrane;GO:0015245|fatty acid transporter activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA690:GhM_D04G0084.1,GhM_D04G0087.1,GhM_D04G0088.1;TA3252:GhM_A05G4861.1,GhM_A05G4864.1 | AT1G50240 | FU; FU (FUSED); protein serine/threonine kinase | GO:0000911|cytokinesis by cell plate formation;GO:0009558|cellularization of the embryo sac;GO:0009524|phragmoplast;GO:0004674|protein serine/threonine kinase activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA692:GhM_D04G0223.1,GhM_D04G0224.1,GhM_D04G0225.1;TA3246:GhM_A05G4715.1,GhM_A05G4716.1 | AT3G10650 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 51621 Blast hits to 25162 proteins in 1378 species: Archae - 161; Bacteria - 11485; Metazoa - 15659; Fungi - 10121; Plants - 1099; Viruses - 600; Other Eukaryotes - 12496 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA707:GhM_D04G1811.1,GhM_D04G1813.1,GhM_D04G1814.1;TA3088:GhM_A04G1330.1,GhM_A04G1332.1 | AT3G49190 | condensation domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA732:GhM_D05G2556.1,GhM_D05G2557.1,GhM_D05G2559.1;TA3178:GhM_A05G2547.1,GhM_A05G2548.1 | AT4G08850 | kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0006468|protein amino acid phosphorylation | - | 5 | 2 | Gossypium | Cotton | |||
| TA736:GhM_D05G3105.1,GhM_D05G3106.1,GhM_D05G3108.1;TA3195:GhM_A05G3105.1,GhM_A05G3107.1 | AT2G33600||AT2G33590 | cinnamoyl-CoA reductase family | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0046686|response to cadmium ion;GO:0044237|cellular metabolic process;GO:0009809|lignin biosynthetic process;GO:0050662|coenzyme binding;GO:0016621|cinnamoyl-CoA reductase activity;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA752:GhM_D06G0036.1,GhM_D06G0037.1,GhM_D06G0038.1;TA3259:GhM_A06G0040.1,GhM_A06G0041.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA755:GhM_D06G0300.1,GhM_D06G0303.1,GhM_D06G0322.1;TA3269:GhM_A06G0307.1,GhM_A06G0309.1 | AT2G27020 | PAG1; PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase | GO:0008233|peptidase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0048046|apoplast;GO:0005886|plasma membrane;GO:0005839|proteasome core complex;GO:0005773|vacuole;GO:0009409|response to cold | - | 5 | 2 | Gossypium | Cotton | |||
| TA769:GhM_D06G2195.1,GhM_D06G2196.1,GhM_D06G2197.1;TA3322:GhM_A06G2219.1,GhM_A06G2220.1 | AT1G11310||AT1G61560 | MLO6, ATMLO6; MLO6 (MILDEW RESISTANCE LOCUS O 6); calmodulin binding||MLO2, ATMLO2, PMR2; MLO2 (MILDEW RESISTANCE LOCUS O 2); calmodulin binding | GO:0009620|response to fungus;GO:0005516|calmodulin binding;GO:0006952|defense response;GO:0031348|negative regulation of defense response;GO:0008219|cell death;GO:0009817|defense response to fungus, incompatible interaction;GO:0005886|plasma membrane | - | 5 | 2 | Gossypium | Cotton | |||
| TA781:GhM_A01G0606.1,GhM_A01G0607.1,GhM_A01G0608.1;TA1571:GhM_D01G0552.1,GhM_D01G0568.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA790:GhM_A01G2138.1,GhM_A01G2139.1,GhM_A01G2140.1;TA1610:GhM_D01G2111.1,GhM_D01G2112.1 | AT2G17030 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA867:GhM_D10G2217.1,GhM_D10G2222.1,GhM_D10G2223.1;TA1194:GhM_A10G2298.1,GhM_A10G2299.1 | AT5G05340 | peroxidase, putative | GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0004601|peroxidase activity;GO:0048046|apoplast;GO:0005618|cell wall | - | 5 | 2 | Gossypium | Cotton | |||
| TA918:GhM_D12G2208.1,GhM_D12G2209.1,GhM_D12G2210.1;TA1415:GhM_A12G2316.1,GhM_A12G2317.1 | AT3G02100 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA926:GhM_D12G3206.1,GhM_D12G3207.1,GhM_D12G3208.1;TA1447:GhM_A12G3321.1,GhM_A12G3322.1 | AT1G73220 | AtOCT1; AtOCT1 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER1); carbohydrate transmembrane transporter/ carnitine transporter/ transporter | GO:0015144|carbohydrate transmembrane transporter activity;GO:0015226|carnitine transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005215|transporter activity | - | 5 | 2 | Gossypium | Cotton | |||
| TA942:GhM_D13G1777.1,GhM_D13G1778.1,GhM_D13G1783.1;TA1508:GhM_A13G1886.1,GhM_A13G1891.1 | AT2G03200||AT1G01300||AT2G28030 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0009505|plant-type cell wall;GO:0016020|membrane;GO:0012505|endomembrane system | - | 5 | 2 | Gossypium | Cotton | |||
| TA943:GhM_D13G1979.1,GhM_D13G1982.1,GhM_D13G1983.1;TA1515:GhM_A13G2088.1,GhM_A13G2089.1 | AT2G36780||AT2G36790 | UGT73C6; UGT73C6 (UDP-glucosyl transferase 73C6); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0051555|flavonol biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA950:GhM_A02G0186.1,GhM_A02G0197.1,GhM_A02G0198.1;TA1642:GhM_D02G0194.1,GhM_D02G0201.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA951:GhM_A02G0234.1,GhM_A02G0235.1,GhM_A02G0236.1;TA1644:GhM_D02G0232.1,GhM_D02G0233.1 | - | - | - | - | 5 | 2 | Gossypium | Cotton | |||
| TA968:GhM_A03G0233.1,GhM_A03G0234.1,GhM_A03G0235.1;TA1785:GhM_D03G1878.1,GhM_D03G1879.1 | AT1G12550 | oxidoreductase family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037|cofactor binding;GO:0051287|NAD or NADH binding | - | 5 | 2 | Gossypium | Cotton | |||
| TA970:GhM_A03G0686.1,GhM_A03G0687.1,GhM_A03G0688.1;TA1764:GhM_D03G1420.1,GhM_D03G1422.1 | AT2G29730||AT1G07250 | UGT71D1; UGT71D1 (UDP-GLUCOSYL TRANSFERASE 71D1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT71C4; UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4); quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 5 | 2 | Gossypium | Cotton | |||
| TA995:GhM_A04G0578.1,GhM_A04G0579.1,GhM_A04G0580.1;TA1973:GhM_D05G3659.1,GhM_D05G3660.1 | AT1G04645 | self-incompatibility protein-related | GO:0008150|biological_process;GO:0003674|molecular_function | - | 5 | 2 | Gossypium | Cotton | |||
| TA1004:GhM_A04G1405.1,GhM_A04G1406.1,GhM_A04G1407.1 | - | - | - | GhM_D04G1894.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1005:GhM_A04G1409.1,GhM_A04G1410.1,GhM_A04G1411.1 | AT1G70850 | MLP34; MLP34 (MLP-LIKE PROTEIN 34) | GO:0006952|defense response;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0009607|response to biotic stimulus | GhM_D04G1895.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1035:GhM_A05G3177.1,GhM_A05G3178.1,GhM_A05G3179.1 | AT5G45277 | - | - | GhM_D05G3181.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1070:GhM_A07G0929.1,GhM_A07G0930.1,GhM_A07G0931.1 | AT1G66390||AT1G56650 | PAP1, MYB75, SIAA1, ATMYB75; PAP1 (PRODUCTION OF ANTHOCYANIN PIGMENT 1); DNA binding / transcription factor||ATMYB90, PAP2, MYB90; MYB90 (MYB DOMAIN PROTEIN 90); DNA binding / transcription factor | GO:0031540|regulation of anthocyanin biosynthetic process;GO:0045449|regulation of transcription;GO:0009718|anthocyanin biosynthetic process;GO:0019430|removal of superoxide radicals;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0009651|response to salt stress;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0046283|anthocyanin metabolic process;GO:0009745|sucrose mediated signaling | GhM_D07G0928.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1078:GhM_A07G2312.1,GhM_A07G2313.1,GhM_A07G2314.1 | AT5G24910 | CYP714A1; CYP714A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D07G2245.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1082:GhM_A08G0027.1,GhM_A08G0033.1,GhM_A08G0034.1 | AT5G59100||AT3G46850||AT5G59190||AT3G46840 | subtilase family protein | GO:0012505|endomembrane system;GO:0004252|serine-type endopeptidase activity;GO:0046686|response to cadmium ion;GO:0042802|identical protein binding;GO:0043086|negative regulation of catalytic activity;GO:0006508|proteolysis;GO:0005575|cellular_component | GhM_D08G0021.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1091:GhM_A08G1191.1,GhM_A08G1192.1,GhM_A08G1193.1 | AT2G18660 | EXLB3; EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) | GO:0005576|extracellular region;GO:0005618|cell wall | GhM_D08G1064.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1094:GhM_A08G1825.1,GhM_A08G1826.1,GhM_A08G1827.1 | AT2G45320 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | GhM_D08G1777.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1110:GhM_A09G1388.1,GhM_A09G1389.1,GhM_A09G1390.1 | AT2G37900||AT5G14940 | proton-dependent oligopeptide transport (POT) family protein | GO:0009624|response to nematode;GO:0015171|amino acid transmembrane transporter activity;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_D09G1305.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1118:GhM_A09G2411.1,GhM_A09G2414.1,GhM_A09G2418.1 | - | - | - | GhM_D09G2302.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1138:GhM_A10G0441.1,GhM_A10G0448.1 | AT3G04490 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | GhM_A08G2779.1,GhM_D08G2723.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1166:GhM_A10G1284.1,GhM_A10G1286.1 | AT2G20840 | secretory carrier membrane protein (SCAMP) family protein | GO:0022857|transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015031|protein transport | GhM_A02G1330.1,GhM_A04G0855.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1170:GhM_A10G1368.1,GhM_A10G1370.1 | AT2G43560||AT5G15860 | ATPCME; ATPCME (PRENYLCYSTEINE METHYLESTERASE); prenylcysteine methylesterase||immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0031977|thylakoid lumen;GO:0009579|thylakoid;GO:0006457|protein folding;GO:0010296|prenylcysteine methylesterase activity;GO:0009543|chloroplast thylakoid lumen;GO:0005528|FK506 binding;GO:0016020|membrane | GhM_A04G0988.1,GhM_A12G1904.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1179:GhM_A10G1739.1,GhM_A10G1742.1 | AT4G37650 | SHR, SGR7; SHR (SHORT ROOT); protein binding / sequence-specific DNA binding / transcription factor | GO:0055072|iron ion homeostasis;GO:0005515|protein binding;GO:0032350|regulation of hormone metabolic process;GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0003700|transcription factor activity;GO:0009956|radial pattern formation;GO:0008356|asymmetric cell division | GhM_D10G1391.1,GhM_A10G1740.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1197:GhM_A10G2380.1,GhM_A10G2382.1 | AT3G12260 | complex 1 family protein / LVR family protein | GO:0016020|membrane;GO:0045271|respiratory chain complex I;GO:0003824|catalytic activity;GO:0005739|mitochondrion | GhM_D10G2310.1,GhM_D03G1502.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1236:GhM_A11G0788.1,GhM_A11G0789.1 | AT4G16640||AT1G59970 | matrix metalloproteinase, putative||matrixin family protein | GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0031225|anchored to membrane;GO:0008152|metabolic process | GhM_D11G0803.1,GhM_D11G0813.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1240:GhM_A11G0880.1,GhM_A11G0881.1 | AT2G44840 | ATERF13, EREBP, ERF13; ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13); DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_D11G0895.1,GhM_D11G0896.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1243:GhM_A11G0967.1,GhM_A11G0973.1 | AT2G42010 | PLDBETA1, PLDBETA; PLDBETA1 (PHOSPHOLIPASE D BETA 1); phospholipase D | GO:0046686|response to cadmium ion;GO:0005515|protein binding;GO:0004630|phospholipase D activity;GO:0009816|defense response to bacterium, incompatible interaction | GhM_D11G0983.1,GhM_D12G1309.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1251:GhM_A11G1185.1,GhM_A11G1186.1 | ATCG00120 | ATPA; Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. | GO:0009507|chloroplast;GO:0031977|thylakoid lumen;GO:0009579|thylakoid;GO:0016020|membrane;GO:0042742|defense response to bacterium | GhM_D08G1157.1,GhM_Scaf220G346.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1255:GhM_A11G1324.1,GhM_A11G1325.1 | AT2G47540 | pollen Ole e 1 allergen and extensin family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D11G1325.1,GhM_D11G1326.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1406:GhM_A12G1943.1,GhM_A12G1944.1 | AT3G60360 | EDA14, UTP11; EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) | GO:0009561|megagametogenesis;GO:0032040|small-subunit processome;GO:0003674|molecular_function | GhM_D10G2703.1,GhM_A06G2353.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1441:GhM_A12G3107.1,GhM_A12G3108.1 | AT5G24090 | acidic endochitinase (CHIB1) | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0009642|response to light intensity;GO:0042631|cellular response to water deprivation;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0009611|response to wounding;GO:0009651|response to salt stress;GO:0009409|response to cold | GhM_A12G1513.1,GhM_D12G2993.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1496:GhM_A13G1451.1,GhM_A13G1452.1 | - | - | - | GhM_A08G1988.1,GhM_A09G0657.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1507:GhM_A13G1827.1,GhM_A13G1830.1 | - | - | - | GhM_A07G2416.1,GhM_D10G0002.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1523:GhM_A13G2206.1,GhM_A13G2207.1 | - | - | - | GhM_D13G2093.1,GhM_D13G2105.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1553:GhM_D01G0237.1,GhM_D01G0238.1 | AT5G43560 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A01G0272.1,GhM_D10G1772.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1557:GhM_D01G0301.1,GhM_D01G0302.1 | AT3G06590 | transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0009507|chloroplast;GO:0045449|regulation of transcription | GhM_A02G0628.1,GhM_D02G0621.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1560:GhM_D01G0389.1,GhM_D01G0393.1 | - | - | - | GhM_A01G0402.1,GhM_A05G2426.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1604:GhM_D01G1871.1,GhM_D01G1872.1 | AT3G26790 | FUS3; FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009733|response to auxin stimulus;GO:0009793|embryonic development ending in seed dormancy;GO:0010116|positive regulation of abscisic acid biosynthetic process;GO:0010262|somatic embryogenesis;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010373|negative regulation of gibberellin biosynthetic process;GO:0005575|cellular_component | GhM_A09G2330.1,GhM_D09G2231.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1618:GhM_D01G2520.1,GhM_D01G2522.1 | AT4G25490||AT2G36450 | CBF1, DREB1B, ATCBF1; CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor||HRD; HRD (HARDY); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0050832|defense response to fungus;GO:0009631|cold acclimation;GO:0009409|response to cold | GhM_A01G2592.1,GhM_A01G2593.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1645:GhM_D02G0254.1,GhM_D02G0273.1 | AT2G32760 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A02G0255.1,GhM_D09G2377.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1671:GhM_D02G0826.1,GhM_D02G0827.1 | - | - | - | GhM_A02G0836.1,GhM_A02G0837.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1682:GhM_D02G1022.1,GhM_D02G1023.1 | AT3G63470 | scpl40; scpl40 (serine carboxypeptidase-like 40); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A05G2245.1,GhM_D05G2264.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1701:GhM_D02G2350.1,GhM_D02G2352.1 | AT2G02220 | ATPSKR1, PSKR1; PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase | GO:0012505|endomembrane system | GhM_A03G2319.1,GhM_A03G2320.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1705:GhM_D02G2510.1,GhM_D02G2511.1 | AT3G19184||AT5G58280 | DNA binding||transcriptional factor B3 family protein | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G2490.1,GhM_A03G2491.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1753:GhM_D03G1055.1,GhM_D03G1056.1 | - | - | - | GhM_A02G1171.1,GhM_A02G1169.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1825:GhM_D04G1289.1,GhM_D04G1295.1 | AT3G09970 | calcineurin-like phosphoesterase family protein | GO:0016787|hydrolase activity | GhM_A04G0842.1,GhM_A04G0768.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1839:GhM_D04G1836.1,GhM_D04G1837.1 | AT1G49350 | pfkB-type carbohydrate kinase family protein | GO:0016301|kinase activity;GO:0004747|ribokinase activity;GO:0005575|cellular_component;GO:0006014|D-ribose metabolic process | GhM_A04G1352.1,GhM_D12G1737.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1862:GhM_D04G2220.1,GhM_D04G2223.1 | AT3G04070 | anac047; anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | GO:0045449|regulation of transcription | GhM_D13G2100.1,GhM_D11G2946.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2039:GhM_D06G1267.1,GhM_D06G1272.1 | AT1G80840||AT4G31800 | WRKY18, ATWRKY18; WRKY18; transcription factor||WRKY40, ATWRKY40; WRKY40; transcription factor | GO:0005515|protein binding;GO:0050691|regulation of defense response to virus by host;GO:0031347|regulation of defense response;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0009611|response to wounding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium | GhM_A06G1243.1,GhM_A06G1249.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2062:GhM_D06G2071.1,GhM_D06G2079.1 | AT3G16030||AT1G67520||AT1G65790 | ARK1; ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase||CES101; CES101 (CALLUS EXPRESSION OF RBCS 101); ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0005634|nucleus;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0019199|transmembrane receptor protein kinase activity;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A06G2089.1,GhM_A06G2101.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2095:GhM_A01G0145.1,GhM_A01G0151.1 | AT5G64360 | DNAJ heat shock N-terminal domain-containing protein | GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_D01G0122.1,GhM_D01G0130.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2107:GhM_A01G0359.1,GhM_A01G0361.1 | AT1G56200 | emb1303; emb1303 (embryo defective 1303) | GO:0009793|embryonic development ending in seed dormancy;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_D07G2026.1,GhM_D12G0880.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2134:GhM_A01G0876.1,GhM_A01G0877.1 | - | - | - | GhM_D01G0840.1,GhM_A02G0393.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2139:GhM_A01G1061.1,GhM_A01G1062.1 | - | - | - | GhM_D01G1028.1,GhM_D01G1031.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2157:GhM_A01G1717.1,GhM_A01G1718.1 | AT5G47000 | peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0009044|xylan 1,4-beta-xylosidase activity;GO:0004601|peroxidase activity | GhM_D01G1700.1,GhM_D01G1691.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2165:GhM_A01G1940.1,GhM_A01G1941.1 | AT1G24460 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D01G1979.1,GhM_D02G1844.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2175:GhM_A01G2171.1,GhM_A01G2172.1 | AT1G19250 | FMO1; FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); FAD binding / NADP or NADPH binding / electron carrier/ flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | GO:0012505|endomembrane system;GO:0042742|defense response to bacterium;GO:0009055|electron carrier activity;GO:0051707|response to other organism;GO:0010204|defense response signaling pathway, resistance gene-independent;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0009627|systemic acquired resistance;GO:0009626|plant-type hypersensitive response;GO:0050661|NADP or NADPH binding;GO:0031227|intrinsic to endoplasmic reticulum membrane;GO:0050832|defense response to fungus;GO:0050660|FAD binding;GO:0004497|monooxygenase activity;GO:0004499|flavin-containing monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_D01G2139.1,GhM_D04G2131.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2220:GhM_D07G0856.1,GhM_D07G0859.1 | AT1G67140 | SWEETIE; SWEETIE (SWEETIE); binding | GO:0005982|starch metabolic process;GO:0005991|trehalose metabolic process;GO:0005488|binding;GO:0005975|carbohydrate metabolic process;GO:0005829|cytosol | GhM_A07G0855.1,GhM_A07G0856.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2234:GhM_D07G1267.1,GhM_D07G1269.1 | AT5G22640 | emb1211; emb1211 (embryo defective 1211) | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009793|embryonic development ending in seed dormancy;GO:0009535|chloroplast thylakoid membrane | GhM_A07G1291.1,GhM_D07G1268.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2288:GhM_D07G2834.1,GhM_D07G2836.1 | AT1G28680 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_A06G1570.1,GhM_D06G1685.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2328:GhM_D08G1978.1,GhM_D08G1979.1 | AT4G19020 | CMT2; CMT2 (chromomethylase 2); DNA binding / chromatin binding | GO:0005634|nucleus;GO:0006306|DNA methylation;GO:0006333|chromatin assembly or disassembly;GO:0003682|chromatin binding;GO:0003677|DNA binding;GO:0000785|chromatin | GhM_A08G2026.1,GhM_A08G2027.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2366:GhM_D09G0200.1,GhM_D09G0203.1 | AT3G63220||AT4G23100 | kelch repeat-containing F-box family protein||RML1, PAD2, GSH1, CAD2, ATECS1, GSHA; GSH1 (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase | GO:0046686|response to cadmium ion;GO:0009908|flower development;GO:0010193|response to ozone;GO:0009816|defense response to bacterium, incompatible interaction;GO:0006750|glutathione biosynthetic process;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0019761|glucosinolate biosynthetic process;GO:0009570|chloroplast stroma;GO:0009753|response to jasmonic acid stimulus;GO:0002213|defense response to insect;GO:0004357|glutamate-cysteine ligase activity;GO:0050832|defense response to fungus;GO:0009408|response to heat;GO:0009507|chloroplast;GO:0009700|indole phytoalexin biosynthetic process;GO:0003674|molecular_function;GO:0052544|callose deposition in cell wall during defense response;GO:0042742|defense response to bacterium | GhM_A01G1529.1,GhM_D12G1751.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2395:GhM_D09G1088.1,GhM_D09G1089.1 | - | - | - | GhM_D09G1149.1,GhM_A09G1160.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2440:GhM_D09G2811.1,GhM_D09G2815.1 | AT5G66520||AT3G47530 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A09G2950.1,GhM_A09G2954.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2467:GhM_D10G0882.1,GhM_D10G0883.1 | AT2G02390||AT2G02380 | ATGSTZ1, GST18; ATGSTZ1 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE ZETA 1); catalytic/ glutathione transferase||ATGSTZ2; ATGSTZ2; catalytic/ glutathione transferase | GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0003824|catalytic activity;GO:0005737|cytoplasm | GhM_A10G0760.1,GhM_A10G1978.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2500:GhM_D10G2224.1,GhM_D10G2227.1 | AT5G27760 | hypoxia-responsive family protein | GO:0005575|cellular_component;GO:0001666|response to hypoxia;GO:0003674|molecular_function | GhM_A05G3157.1,GhM_A10G2300.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2628:GhM_D11G3095.1,GhM_D11G3106.1 | AT1G45616||AT2G32660 | AtRLP22; AtRLP22 (Receptor Like Protein 22); kinase/ protein binding||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding | GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005575|cellular_component | GhM_A11G3171.1,GhM_D11G3430.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2648:GhM_D11G3471.1,GhM_D11G3475.1 | AT1G74960||AT1G72330 | FAB1, KAS2; FAB1 (FATTY ACID BIOSYNTHESIS 1); 3-oxoacyl-[acyl-carrier-protein] synthase/ fatty-acid synthase||ALAAT2; ALAAT2 (ALANINE AMINOTRANSFERASE 2); ATP binding / L-alanine:2-oxoglutarate aminotransferase | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0019272|L-alanine biosynthetic process from pyruvate;GO:0009058|biosynthetic process;GO:0004021|L-alanine:2-oxoglutarate aminotransferase activity;GO:0005739|mitochondrion;GO:0019481|L-alanine catabolic process, by transamination;GO:0005524|ATP binding;GO:0006096|glycolysis | GhM_A09G0002.1,GhM_D08G1040.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2755:GhM_D12G2978.1,GhM_D12G2985.1 | AT4G27940 | ATMTM1, MTM1; mitochondrial substrate carrier family protein | GO:0006810|transport;GO:0005488|binding;GO:0006839|mitochondrial transport;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A12G3094.1,GhM_D08G1226.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2779:GhM_D13G0397.1,GhM_D13G0398.1 | AT2G15880 | leucine-rich repeat family protein / extensin family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0005199|structural constituent of cell wall | GhM_A12G0285.1,GhM_A13G0415.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2805:GhM_D13G1106.1,GhM_D13G1108.1 | - | - | - | GhM_D01G1624.1,GhM_D05G0311.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2826:GhM_D13G1976.1,GhM_D13G1977.1 | AT5G25130 | CYP71B12; CYP71B12; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0020037|heme binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A07G2655.1,GhM_D07G2552.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2843:GhM_D13G2369.1,GhM_D13G2370.1 | AT4G32870||AT2G25770 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A13G2474.1,GhM_A13G2475.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2856:GhM_D13G2619.1,GhM_D13G2623.1 | AT5G19850 | hydrolase, alpha/beta fold family protein | GO:0016787|hydrolase activity | GhM_A03G2337.1,GhM_D03G1460.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2860:GhM_D13G2740.1,GhM_D13G2751.1 | AT3G44200 | "ATNEK6, NEK6, IBO1; NEK6 (""NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6""); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase" | GO:0055028|cortical microtubule;GO:0004672|protein kinase activity;GO:0009913|epidermal cell differentiation;GO:0007017|microtubule-based process;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A13G2858.1,GhM_D07G1335.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2876:GhM_A02G0153.1,GhM_A02G0156.1 | AT1G06710 | pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component | GhM_A02G0154.1,GhM_D02G0161.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2892:GhM_A02G0521.1,GhM_A02G0524.1 | AT2G47900 | AtTLP3; AtTLP3 (TUBBY LIKE PROTEIN 3); phosphoric diester hydrolase/ transcription factor | GO:0008081|phosphoric diester hydrolase activity;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_D02G0510.1,GhM_D09G0813.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2896:GhM_A02G0622.1,GhM_A02G0623.1 | AT3G06620 | protein kinase family protein | GO:0006468|protein amino acid phosphorylation;GO:0006355|regulation of transcription, DNA-dependent;GO:0007165|signal transduction;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0016301|kinase activity | GhM_D02G0616.1,GhM_D09G2729.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2914:GhM_A02G1476.1,GhM_A02G1479.1 | AT5G05070||AT3G56930 | zinc finger (DHHC type) family protein||zinc ion binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_D03G0690.1,GhM_D03G0904.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2924:GhM_A02G1684.1,GhM_A02G1690.1 | AT3G24982||AT2G34930 | protein binding||disease resistance family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0005618|cell wall;GO:0050832|defense response to fungus | GhM_D03G0581.1,GhM_D03G0580.1 | 4 | 1 | Gossypium | Cotton | |||
| TA2933:GhM_A02G1841.1,GhM_A02G1862.1 | AT3G02940||AT1G34670 | MYB107, AtMYB107; MYB107 (myb domain protein 107); DNA binding / transcription factor||AtMYB93; AtMYB93 (myb domain protein 93); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0009733|response to auxin stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus | GhM_D03G0572.1,GhM_D03G0400.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3020:GhM_A03G2149.1,GhM_A03G2155.1 | AT4G28110||AT2G31180 | ATMYB14, MYB14AT, MYB14; MYB14 (MYB DOMAIN PROTEIN 14); DNA binding / transcription factor||AtMYB41; AtMYB41 (myb domain protein 41); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0010200|response to chitin;GO:0009733|response to auxin stimulus;GO:0016049|cell growth;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0016481|negative regulation of transcription;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0042335|cuticle development | GhM_D02G2172.1,GhM_D02G2176.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3023:GhM_A03G2305.1,GhM_A03G2309.1 | AT5G64240||AT1G02170 | LOL3, ATMCPB1, MCP1B, AMC1, ATMC1; AMC1 (METACASPASE 1); cysteine-type endopeptidase||AtMC3; AtMC3 (metacaspase 3); cysteine-type endopeptidase | GO:0006508|proteolysis;GO:0009507|chloroplast | GhM_D02G2329.1,GhM_D02G2336.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3057:GhM_A04G0327.1,GhM_A04G0328.1 | AT2G41720 | EMB2654; EMB2654 (EMBRYO DEFECTIVE 2654) | GO:0009793|embryonic development ending in seed dormancy | GhM_D05G4360.1,GhM_D05G4043.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3059:GhM_A04G0353.1,GhM_A04G0357.1 | AT1G12700||AT3G16710 | helicase domain-containing protein / pentatricopeptide (PPR) repeat-containing protein||INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002 proteins in 187 species: Archae - 3; Bacteria - 22; Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink). | GO:0008150|biological_process;GO:0003676|nucleic acid binding;GO:0004386|helicase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A10G1595.1,GhM_A05G2996.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3065:GhM_A04G0540.1,GhM_A04G0541.1 | AT3G12910||AT2G43000 | anac042; anac042 (Arabidopsis NAC domain containing protein 42); transcription factor||transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_D05G3846.1,GhM_D10G2523.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3067:GhM_A04G0546.1,GhM_A04G0549.1 | AT1G54970||AT2G47540 | ATPRP1; ATPRP1 (PROLINE-RICH PROTEIN 1); structural constituent of cell wall||pollen Ole e 1 allergen and extensin family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005618|cell wall;GO:0005199|structural constituent of cell wall | GhM_D05G3839.1,GhM_D05G3842.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3104:GhM_A04G1658.1,GhM_A04G1659.1 | AT1G25270 | LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT1G68170.1); Has 1288 Blast hits to 1274 proteins in 251 species: Archae - 4; Bacteria - 491; Metazoa - 4; Fungi - 8; Plants - 639; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0016020|membrane | GhM_D04G2144.1,GhM_A04G1764.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3114:GhM_A05G0028.1,GhM_A05G0033.1 | AT5G52630||AT2G34400||AT1G11290 | pentatricopeptide (PPR) repeat-containing protein||CRR22; CRR22 (CHLORORESPIRATORY REDUCTION22); endonuclease||MEF1; MEF1 (MITOCHONDRIAL RNA EDITING FACTOR 1) | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0004519|endonuclease activity;GO:0016556|mRNA modification;GO:0016554|cytidine to uridine editing;GO:0005575|cellular_component | GhM_D05G0029.1,GhM_D05G0034.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3119:GhM_A05G0303.1,GhM_A05G0305.1 | AT2G19710 | unknown protein | GO:0008150|biological_process | GhM_D05G0318.1,GhM_A05G0304.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3124:GhM_A05G0400.1,GhM_A05G0402.1 | AT3G14300||AT1G53830||AT3G14310 | ATPMEPCRC, ATPME26, PME26; ATPMEPCRC; pectinesterase||ATPME3; ATPME3; pectinesterase||ATPME2; ATPME2; pectinesterase | GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0009624|response to nematode;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0005576|extracellular region;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0005886|plasma membrane | GhM_D05G0418.1,GhM_D05G0420.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3172:GhM_A05G2373.1,GhM_A05G2374.1 | AT5G09640||AT1G73300||AT1G33540||AT3G12240 | SNG2, SCPL19; SCPL19; serine-type carboxypeptidase/ sinapoyltransferase||scpl2; scpl2 (serine carboxypeptidase-like 2); serine-type carboxypeptidase||SCPL15; SCPL15 (serine carboxypeptidase-like 15); serine-type carboxypeptidase||scpl18; scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | GO:0012505|endomembrane system;GO:0019748|secondary metabolic process;GO:0006508|proteolysis;GO:0016752|sinapoyltransferase activity | GhM_D05G2387.1,GhM_A13G1159.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3180:GhM_A05G2572.1,GhM_A05G2573.1 | - | - | - | GhM_D05G2585.1,GhM_A05G3221.1 | 4 | 1 | Gossypium | Cotton | |||
| TA319:GhM_A10G2734.1,GhM_A10G2735.1,GhM_A10G2736.1,GhM_A10G2737.1 | AT5G46660 | CHP-rich zinc finger protein, putative | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 4 | 1 | Gossypium | Cotton | |||
| TA3217:GhM_A05G3779.1,GhM_A05G3785.1 | - | - | - | GhM_A09G0422.1,GhM_A07G2362.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3237:GhM_A05G4458.1,GhM_A05G4461.1 | - | - | - | GhM_D04G0487.1,GhM_Scaf001G004.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3249:GhM_A05G4783.1,GhM_A05G4785.1 | AT3G27890 | NQR; NQR (NADPH:QUINONE OXIDOREDUCTASE); FMN reductase | GO:0009507|chloroplast;GO:0008752|FMN reductase activity;GO:0009570|chloroplast stroma;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0042742|defense response to bacterium | GhM_A05G3181.1,GhM_D05G3183.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3271:GhM_A06G0334.1,GhM_A06G0336.1 | AT1G58225 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D06G0347.1,GhM_A05G2455.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3276:GhM_A06G0443.1,GhM_A06G0444.1 | - | - | - | GhM_D06G0465.1,GhM_D06G1052.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3431:GhM_A08G0438.1,GhM_A08G0439.1 | AT3G08770||AT3G61730 | unknown protein||LTP6; LTP6; lipid binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0006869|lipid transport;GO:0008289|lipid binding;GO:0005575|cellular_component | GhM_D08G0424.1,GhM_D08G0425.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3437:GhM_A08G0594.1,GhM_A08G0595.1 | AT3G23240 | ERF1, ATERF1; ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006952|defense response;GO:0009867|jasmonic acid mediated signaling pathway | GhM_D08G0565.1,GhM_D13G1280.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3485:GhM_A08G2698.1,GhM_A08G2700.1 | AT1G62680||AT3G16710||AT1G12300 | pentatricopeptide (PPR) repeat-containing protein||INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.10 ten leaves visible, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002 proteins in 187 species: Archae - 3; Bacteria - 22; Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink).||LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to 6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421 (source: NCBI BLink). | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0005739|mitochondrion | GhM_A13G0807.1,GhM_D10G1511.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3492:GhM_A08G2883.1,GhM_A08G2884.1 | AT3G16830||AT1G80490 | TPR2; TPR2 (TOPLESS-RELATED 2)||TPR1; TPR1 (TOPLESS-RELATED 1) | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0010072|primary shoot apical meristem specification;GO:0005829|cytosol | GhM_A08G2495.1,GhM_D08G2828.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3534:GhM_A09G0922.1,GhM_A09G0923.1 | AT3G17020 | universal stress protein (USP) family protein | GO:0006950|response to stress;GO:0005886|plasma membrane;GO:0009409|response to cold;GO:0003674|molecular_function | GhM_A02G0615.1,GhM_D09G0858.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3598:GhM_Scaf008G095.1,GhM_Scaf008G100.1 | AT5G19790 | RAP2.11; RAP2.11 (related to AP2 11); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_A09G0152.1,GhM_D09G0149.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3603:GhM_Scaf001G024.1,GhM_Scaf001G026.1 | - | - | - | GhM_A01G2049.1,GhM_Scaf198G322.1 | 4 | 1 | Gossypium | Cotton | |||
| TA3604:GhM_Scaf001G044.1,GhM_Scaf001G045.1 | - | - | - | GhM_D02G1470.1,GhM_D13G0530.1 | 4 | 1 | Gossypium | Cotton | |||
| TA371:GhM_D03G0216.1,GhM_D03G0217.1,GhM_D03G0220.1,GhM_D03G0222.1 | AT5G66816 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 1 | Gossypium | Cotton | |||
| TA406:GhM_D07G1721.1,GhM_D07G1722.1,GhM_D07G1723.1,GhM_D07G1724.1 | AT1G01800||AT3G61220 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0009505|plant-type cell wall;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0047504|(-)-menthol dehydrogenase activity;GO:0005488|binding;GO:0047501|(+)-neomenthol dehydrogenase activity;GO:0006952|defense response;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | - | 4 | 1 | Gossypium | Cotton | |||
| TA423:GhM_D08G3120.1,GhM_D08G3121.1,GhM_D08G3123.1,GhM_D08G3125.1 | AT5G15500||AT1G14480 | ankyrin repeat family protein||protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0005575|cellular_component | - | 4 | 1 | Gossypium | Cotton | |||
| TA467:GhM_D13G1985.1,GhM_D13G1987.1,GhM_D13G1988.1,GhM_D13G1989.1 | AT3G47250||AT3G50120||AT4G31980||AT3G50150 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0005575|cellular_component | - | 4 | 1 | Gossypium | Cotton | |||
| TA517:GhM_A08G0398.1,GhM_A08G0399.1,GhM_A08G0400.1,GhM_A08G0401.1 | - | - | - | - | 4 | 1 | Gossypium | Cotton | |||
| TA532:GhM_A09G2468.1,GhM_A09G2469.1,GhM_A09G2470.1,GhM_A09G2471.1 | AT1G80110||AT2G02250||AT2G02360||AT2G02240 | ATPP2-B11; ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11); carbohydrate binding||MEE66; MEE66 (maternal effect embryo arrest 66)||AtPP2-B10; AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding||AtPP2-B2; AtPP2-B2 (Phloem protein 2-B2); carbohydrate binding | GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0006499|N-terminal protein myristoylation;GO:0030246|carbohydrate binding;GO:0005575|cellular_component | - | 4 | 1 | Gossypium | Cotton | |||
| TA547:GhM_A10G1822.1,GhM_A10G1826.1,GhM_A10G1827.1 | AT1G48910||AT1G21430 | YUC11; YUC11; FAD binding / NADP or NADPH binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase||YUC10; YUC10; FAD binding / monooxygenase/ oxidoreductase | GO:0009653|anatomical structure morphogenesis;GO:0050661|NADP or NADPH binding;GO:0004499|flavin-containing monooxygenase activity;GO:0016020|membrane;GO:0050660|FAD binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_D10G1305.1 | 4 | 1 | Gossypium | Cotton | |||
| TA560:GhM_A10G2695.1,GhM_A10G2715.1,GhM_A10G2716.1 | AT5G39471||AT3G27473||AT5G37620||AT2G19660 | DC1 domain-containing protein||protein binding / zinc ion binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0005575|cellular_component | GhM_D10G2557.1 | 4 | 1 | Gossypium | Cotton | |||
| TA588:GhM_A11G3333.1,GhM_A11G3335.1,GhM_A11G3336.1 | - | - | - | GhM_D11G3250.1 | 4 | 1 | Gossypium | Cotton | |||
| TA597:GhM_A12G0124.1,GhM_A12G0125.1,GhM_A12G0126.1 | AT4G35420 | dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family | GO:0012505|endomembrane system;GO:0005488|binding;GO:0050662|coenzyme binding;GO:0003824|catalytic activity | GhM_D12G0134.1 | 4 | 1 | Gossypium | Cotton | |||
| TA625:GhM_A13G0806.1,GhM_A13G0808.1,GhM_A13G0814.1 | AT1G22360||AT1G22400 | AtUGT85A2; AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||UGT85A1, ATUGT85A1; UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity;GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_D13G0580.1 | 4 | 1 | Gossypium | Cotton | |||
| TA672:GhM_D02G1635.1,GhM_D02G1640.1,GhM_D02G1641.1 | AT3G14470||AT3G46730 | disease resistance protein (CC-NBS class), putative||disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_A03G1528.1 | 4 | 1 | Gossypium | Cotton | |||
| TA678:GhM_D02G2781.1,GhM_D02G2783.1,GhM_D02G2784.1 | AT3G26600 | ARO4; ARO4 (ARMADILLO REPEAT ONLY 4); binding | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_A03G2776.1 | 4 | 1 | Gossypium | Cotton | |||
| TA688:GhM_D03G1803.1,GhM_D03G1805.1,GhM_D03G1808.1 | AT1G63840||AT3G61460 | zinc finger (C3HC4-type RING finger) family protein||BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0009737|response to abscisic acid stimulus;GO:0010200|response to chitin;GO:0009741|response to brassinosteroid stimulus;GO:0008270|zinc ion binding | GhM_A03G0319.1 | 4 | 1 | Gossypium | Cotton | |||
| TA693:GhM_D04G0280.1,GhM_D04G0281.1,GhM_D04G0282.1 | AT4G27190 | disease resistance protein (NBS-LRR class), putative | GO:0005515|protein binding;GO:0000166|nucleotide binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component;GO:0005524|ATP binding | GhM_A05G4666.1 | 4 | 1 | Gossypium | Cotton | |||
| TA694:GhM_D04G0337.1,GhM_D04G0339.1,GhM_D04G0341.1 | AT2G05360 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein-related (TAIR:AT1G64295.1); Has 29 Blast hits to 27 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4610.1 | 4 | 1 | Gossypium | Cotton | |||
| TA696:GhM_D04G0356.1,GhM_D04G0357.1,GhM_D04G0365.1 | AT1G19025 | DNA cross-link repair protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4594.1 | 4 | 1 | Gossypium | Cotton | |||
| TA702:GhM_D04G0735.1,GhM_D04G0740.1,GhM_D04G0742.1 | - | - | - | GhM_A05G4185.1 | 4 | 1 | Gossypium | Cotton | |||
| TA773:GhM_D06G2302.1,GhM_D06G2304.1,GhM_D06G2305.1 | - | - | - | GhM_A06G2300.1 | 4 | 1 | Gossypium | Cotton | |||
| TA779:GhM_A01G0162.1,GhM_A01G0164.1,GhM_A01G0166.1 | - | - | - | GhM_A01G0165.1 | 4 | 1 | Gossypium | Cotton | |||
| TA785:GhM_A01G1016.1,GhM_A01G1017.1,GhM_A01G1021.1 | AT2G33020||AT5G40170 | AtRLP54; AtRLP54 (Receptor Like Protein 54); kinase/ protein binding||AtRLP24; AtRLP24 (Receptor Like Protein 24); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity | GhM_D01G0982.1 | 4 | 1 | Gossypium | Cotton | |||
| TA788:GhM_A01G1785.1,GhM_A01G1787.1,GhM_A01G1788.1 | AT1G23180 | armadillo/beta-catenin repeat family protein | GO:0008150|biological_process;GO:0005488|binding;GO:0009507|chloroplast | GhM_D01G1823.1 | 4 | 1 | Gossypium | Cotton | |||
| TA810:GhM_D07G2426.1,GhM_D07G2429.1,GhM_D07G2430.1 | AT1G05680||AT2G43820 | GT, UGT74F2; UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2); UDP-glucose:4-aminobenzoate acylglucosyltransferase/ UDP-glucosyltransferase/ UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0046482|para-aminobenzoic acid metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_A07G2524.1 | 4 | 1 | Gossypium | Cotton | |||
| TA815:GhM_D07G2772.1,GhM_D07G2773.1,GhM_D07G2774.1 | AT5G39050 | transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_A07G2868.1 | 4 | 1 | Gossypium | Cotton | |||
| TA823:GhM_D08G0820.1,GhM_D08G0821.1,GhM_D08G0823.1 | AT4G02860 | catalytic | GO:0009058|biosynthetic process;GO:0003824|catalytic activity;GO:0005575|cellular_component | GhM_A08G0868.1 | 4 | 1 | Gossypium | Cotton | |||
| TA824:GhM_D08G1438.1,GhM_D08G1439.1,GhM_D08G1442.1 | - | - | - | GhM_A03G0012.1 | 4 | 1 | Gossypium | Cotton | |||
| TA830:GhM_D08G2627.1,GhM_D08G2628.1,GhM_D08G2629.1 | AT5G27830 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143); Has 46 Blast hits to 46 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003674|molecular_function | GhM_A08G2684.1 | 4 | 1 | Gossypium | Cotton | |||
| TA834:GhM_D08G3129.1,GhM_D08G3130.1,GhM_D08G3131.1 | AT1G52190||AT3G16180 | proton-dependent oligopeptide transport (POT) family protein | GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A08G3198.1 | 4 | 1 | Gossypium | Cotton | |||
| TA835:GhM_D09G0236.1,GhM_D09G0238.1,GhM_D09G0242.1 | AT5G25500 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A09G0263.1 | 4 | 1 | Gossypium | Cotton | |||
| TA862:GhM_D10G1892.1,GhM_D10G1894.1,GhM_D10G1895.1 | AT4G12560||AT3G07870 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0031348|negative regulation of defense response;GO:0005575|cellular_component | GhM_A10G1227.1 | 4 | 1 | Gossypium | Cotton | |||
| TA869:GhM_D10G2388.1,GhM_D10G2389.1,GhM_D10G2390.1 | AT1G07090||AT5G51790 | LSH6; LSH6 (LIGHT SENSITIVE HYPOCOTYLS 6)||basix helix-loop-helix (bHLH) family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component | GhM_A10G2463.1 | 4 | 1 | Gossypium | Cotton | |||
| TA900:GhM_D11G3722.1,GhM_D11G3726.1,GhM_D11G3729.1 | AT5G06740||AT5G17690 | TFL2, LHP1; TFL2 (TERMINAL FLOWER 2); DNA binding / methylated histone residue binding||lectin protein kinase family protein | GO:0005529|sugar binding;GO:0006342|chromatin silencing;GO:0006468|protein amino acid phosphorylation;GO:0003677|DNA binding;GO:0010016|shoot morphogenesis;GO:0035064|methylated histone residue binding;GO:0004674|protein serine/threonine kinase activity;GO:0048573|photoperiodism, flowering;GO:0005720|nuclear heterochromatin;GO:0016301|kinase activity;GO:0045814|negative regulation of gene expression, epigenetic;GO:0004672|protein kinase activity;GO:0000791|euchromatin;GO:0006325|chromatin organization;GO:0012505|endomembrane system;GO:0009825|multidimensional cell growth;GO:0010048|vernalization response;GO:0009648|photoperiodism;GO:0009910|negative regulation of flower development;GO:0030246|carbohydrate binding;GO:0005524|ATP binding | GhM_A11G3812.1 | 4 | 1 | Gossypium | Cotton | |||
| TA912:GhM_D12G1012.1,GhM_D12G1013.1,GhM_D12G1014.1 | AT1G73300||AT1G33540 | scpl2; scpl2 (serine carboxypeptidase-like 2); serine-type carboxypeptidase||scpl18; scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | GhM_A12G1035.1 | 4 | 1 | Gossypium | Cotton | |||
| TA939:GhM_D13G1555.1,GhM_D13G1556.1,GhM_D13G1557.1 | AT4G16730||AT3G25820 | lyase/ magnesium ion binding||ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase | GO:0000287|magnesium ion binding;GO:0008152|metabolic process;GO:0016829|lyase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0050551|myrcene synthase activity | GhM_A13G1678.1 | 4 | 1 | Gossypium | Cotton | |||
| TA946:GhM_D13G2618.1,GhM_D13G2620.1,GhM_D13G2621.1 | AT3G06790 | plastid developmental protein DAG, putative | GO:0008150|biological_process;GO:0050897|cobalt ion binding;GO:0005739|mitochondrion | GhM_A09G2879.1 | 4 | 1 | Gossypium | Cotton | |||
| TA967:GhM_A03G0218.1,GhM_A03G0219.1,GhM_A03G0220.1 | AT1G62810 | copper amine oxidase, putative | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0048038|quinone binding;GO:0008131|amine oxidase activity | GhM_D03G1886.1 | 4 | 1 | Gossypium | Cotton | |||
| TA981:GhM_A04G0085.1,GhM_A04G0089.1,GhM_A04G0091.1 | AT4G05030 | heavy-metal-associated domain-containing protein | GO:0030001|metal ion transport;GO:0005739|mitochondrion | GhM_D05G4322.1 | 4 | 1 | Gossypium | Cotton | |||
| TA982:GhM_A04G0103.1,GhM_A04G0105.1,GhM_A04G0107.1 | AT5G55460 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0008289|lipid binding;GO:0006869|lipid transport | GhM_D05G4306.1 | 4 | 1 | Gossypium | Cotton | |||
| TA984:GhM_A04G0170.1,GhM_A04G0171.1,GhM_A04G0172.1 | AT1G28570||AT1G28600||AT1G28610 | lipase, putative||GDSL-motif lipase, putative | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0006629|lipid metabolic process;GO:0005618|cell wall;GO:0004091|carboxylesterase activity;GO:0016298|lipase activity | GhM_A04G0186.1 | 4 | 1 | Gossypium | Cotton | |||
| TA986:GhM_A04G0307.1,GhM_A04G0310.1,GhM_A04G0311.1 | AT4G21700 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_D05G4076.1 | 4 | 1 | Gossypium | Cotton | |||
| TA994:GhM_A04G0514.1,GhM_A04G0516.1,GhM_A04G0517.1 | AT5G47430 | zinc ion binding | GO:0008150|biological_process;GO:0005634|nucleus;GO:0008270|zinc ion binding | GhM_Scaf066G213.1 | 4 | 1 | Gossypium | Cotton | |||
| TA997:GhM_A04G0679.1,GhM_A04G0681.1,GhM_A04G0682.1 | AT3G12050 | Aha1 domain-containing protein | GO:0006950|response to stress;GO:0051087|chaperone binding;GO:0005737|cytoplasm;GO:0001671|ATPase activator activity | GhM_D04G1054.1 | 4 | 1 | Gossypium | Cotton | |||
| TA1127:GhM_A10G0187.1,GhM_A10G0188.1;TA2444:GhM_D10G0175.1,GhM_D10G0176.1 | AT4G21310 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1129:GhM_A10G0213.1,GhM_A10G0215.1;TA2445:GhM_D10G0199.1,GhM_D10G0200.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1131:GhM_A10G0293.1,GhM_A10G0294.1;TA2447:GhM_D10G0277.1,GhM_D10G0278.1 | AT3G52440||AT1G28310 | Dof-type zinc finger domain-containing protein | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0045449|regulation of transcription | - | 4 | 2 | Gossypium | Cotton | |||
| TA1136:GhM_A10G0399.1,GhM_A10G0400.1;TA2451:GhM_D10G0387.1,GhM_D10G0388.1 | AT1G78830||AT1G78860 | curculin-like (mannose-binding) lectin family protein | GO:0009505|plant-type cell wall;GO:0005529|sugar binding;GO:0048046|apoplast;GO:0005618|cell wall;GO:0005886|plasma membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1141:GhM_A10G0479.1,GhM_A10G0482.1;TA2453:GhM_D10G0460.1,GhM_D10G0462.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1145:GhM_A10G0553.1,GhM_A10G0554.1;TA2455:GhM_D10G0528.1,GhM_D10G0529.1 | AT2G25410||AT2G44581 | protein binding / zinc ion binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1154:GhM_A10G0869.1,GhM_A10G0870.1;TA2463:GhM_D10G0771.1,GhM_D10G0772.1 | AT1G52820 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1155:GhM_A10G0877.1,GhM_A10G0878.1;TA2462:GhM_D10G0762.1,GhM_D10G0764.1 | AT1G15670||AT1G80440 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1158:GhM_A10G0890.1,GhM_A10G0893.1;TA2535:GhM_D10G2994.1,GhM_D10G2996.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1161:GhM_A10G1161.1,GhM_A10G1162.1;TA2469:GhM_D10G0935.1,GhM_D10G0937.1 | AT4G28670||AT5G40380 | protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation | - | 4 | 2 | Gossypium | Cotton | |||
| TA1165:GhM_A10G1269.1,GhM_A10G1270.1;TA2489:GhM_D10G1852.1,GhM_D10G1853.1 | AT2G33380 | RD20; RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | GO:0005792|microsome;GO:0009620|response to fungus;GO:0005509|calcium ion binding;GO:0009737|response to abscisic acid stimulus;GO:0031969|chloroplast membrane;GO:0009651|response to salt stress;GO:0031407|oxylipin metabolic process;GO:0016165|lipoxygenase activity;GO:0009751|response to salicylic acid stimulus;GO:0009269|response to desiccation;GO:0005773|vacuole;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA1171:GhM_A10G1464.1,GhM_A10G1465.1;TA2485:GhM_D10G1656.1,GhM_D10G1657.1 | AT1G04630 | MEE4; MEE4 (maternal effect embryo arrest 4) | GO:0003674|molecular_function;GO:0009793|embryonic development ending in seed dormancy;GO:0005739|mitochondrion;GO:0009853|photorespiration;GO:0045271|respiratory chain complex I;GO:0031966|mitochondrial membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1177:GhM_A10G1726.1,GhM_A10G1728.1;TA2476:GhM_D10G1398.1,GhM_D10G1399.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1188:GhM_A10G2105.1,GhM_A10G2109.1;TA2493:GhM_D10G2043.1,GhM_D10G2047.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1192:GhM_A10G2192.1,GhM_A10G2194.1;TA2496:GhM_D10G2122.1,GhM_D10G2123.1 | AT1G47960 | C/VIF1, ATC/VIF1; C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor | GO:0008150|biological_process;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity;GO:0005618|cell wall;GO:0030599|pectinesterase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1195:GhM_A10G2312.1,GhM_A10G2314.1;TA2501:GhM_D10G2238.1,GhM_D10G2239.1 | AT5G12380 | annexin, putative | GO:0009408|response to heat;GO:0009651|response to salt stress;GO:0009414|response to water deprivation;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA1204:GhM_A10G2544.1,GhM_A10G2546.1;TA2510:GhM_D10G2458.1,GhM_D10G2460.1 | AT1G22060 | LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G22000.1); Has 67094 Blast hits to 30189 proteins in 1408 species: Archae - 880; Bacteria - 6261; Metazoa - 35085; Fungi - 5326; Plants - 2622; Viruses - 293; Other Eukaryotes - 16627 (source: NCBI BLink). | GO:0005773|vacuole | - | 4 | 2 | Gossypium | Cotton | |||
| TA1216:GhM_A10G2823.1,GhM_A10G2824.1;TA2526:GhM_D10G2787.1,GhM_D10G2788.1 | AT2G37740||AT5G06070 | ATZFP10, ZFP10; ZFP10 (ZINC-FINGER PROTEIN 10); nucleic acid binding / transcription factor/ zinc ion binding||RBE, RAB; RBE (RABBIT EARS); nucleic acid binding / transcription factor/ zinc ion binding | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0009934|regulation of meristem structural organization;GO:0005622|intracellular;GO:0003700|transcription factor activity;GO:0003676|nucleic acid binding;GO:0048441|petal development;GO:0008270|zinc ion binding;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA1218:GhM_A10G2893.1,GhM_A10G2894.1;TA2529:GhM_D10G2872.1,GhM_D10G2873.1 | AT5G05790||AT3G11280 | myb family transcription factor | GO:0009739|response to gibberellin stimulus;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus | - | 4 | 2 | Gossypium | Cotton | |||
| TA1226:GhM_A11G0048.1,GhM_A11G0049.1;TA2537:GhM_D11G0050.1,GhM_D11G0051.1 | AT5G52450 | MATE efflux protein-related | GO:0015297|antiporter activity;GO:0009624|response to nematode;GO:0015238|drug transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005215|transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1230:GhM_A11G0383.1,GhM_A11G0384.1;TA2546:GhM_D11G0367.1,GhM_D11G0368.1 | AT3G47730||AT5G61730 | ATATH11, ATH11; ATATH11; ATPase, coupled to transmembrane movement of substances / transporter||ATATH1, ATH1; ATATH1; ATPase, coupled to transmembrane movement of substances / transporter | GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1235:GhM_A11G0736.1,GhM_A11G0737.1;TA2563:GhM_D11G0742.1,GhM_D11G0743.1 | AT5G41120||AT3G26820 | esterase/lipase/thioesterase family protein | GO:0008150|biological_process;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0008415|acyltransferase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1237:GhM_A11G0807.1,GhM_A11G0809.1;TA2564:GhM_D11G0827.1,GhM_D11G0829.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1239:GhM_A11G0849.1,GhM_A11G0850.1;TA2568:GhM_D11G0866.1,GhM_D11G0867.1 | AT5G39050||AT3G29590 | AT5MAT; AT5MAT; O-malonyltransferase/ transferase||transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0008150|biological_process;GO:0009718|anthocyanin biosynthetic process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0050736|O-malonyltransferase activity;GO:0016740|transferase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1241:GhM_A11G0886.1,GhM_A11G0888.1;TA2570:GhM_D11G0900.1,GhM_D11G0901.1 | AT3G60380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1246:GhM_A11G1043.1,GhM_A11G1044.1;TA2573:GhM_D11G1056.1,GhM_D11G1057.1 | AT3G61440 | ATCYSC1, ARATH;BSAS3;1, CYSC1; CYSC1 (CYSTEINE SYNTHASE C1); L-3-cyanoalanine synthase/ cysteine synthase | GO:0005507|copper ion binding;GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0051410|detoxification of nitrogen compound;GO:0019344|cysteine biosynthetic process;GO:0019499|cyanide metabolic process;GO:0004124|cysteine synthase activity;GO:0050017|L-3-cyanoalanine synthase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1252:GhM_A11G1197.1,GhM_A11G1198.1;TA2578:GhM_D11G1203.1,GhM_D11G1204.1 | AT3G15510||AT3G10490||AT3G03200 | anac045; anac045 (Arabidopsis NAC domain containing protein 45); transcription factor||anac051; anac052 (Arabidopsis NAC domain containing protein 52); transcription factor||ATNAC2, ANAC056, NARS1; ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | GO:0009555|pollen development;GO:0007275|multicellular organismal development;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005730|nucleolus;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1259:GhM_A11G1422.1,GhM_A11G1424.1;TA2584:GhM_D11G1412.1,GhM_D11G1414.1 | AT3G63070 | PWWP domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1265:GhM_A11G1867.1,GhM_A11G1868.1;TA2592:GhM_D11G1856.1,GhM_D11G1857.1 | AT3G52115||AT5G15720 | GLIP7; GLIP7; carboxylesterase/ lipase||ATGR1, ATCOM1, COM1; ATGR1 (ARABIDOPSIS THALIANA GAMMA RESPONSE GENE 1) | GO:0012505|endomembrane system;GO:0006974|response to DNA damage stimulus;GO:0000706|meiotic DNA double-strand break processing;GO:0006629|lipid metabolic process;GO:0007276|gamete generation;GO:0010212|response to ionizing radiation;GO:0004091|carboxylesterase activity;GO:0016298|lipase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1269:GhM_A11G1957.1,GhM_A11G1958.1;TA2598:GhM_D11G1944.1,GhM_D11G1945.1 | AT5G15900 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1274:GhM_A11G2206.1,GhM_A11G2207.1;TA2606:GhM_D11G2183.1,GhM_D11G2185.1 | AT2G23620||AT3G50440 | ATMES1, MES1; MES1 (METHYL ESTERASE 1); hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase/ methyl salicylate esterase||ATMES10, MES10; MES10 (METHYL ESTERASE 10); hydrolase/ hydrolase, acting on ester bonds / methyl jasmonate esterase | GO:0016787|hydrolase activity;GO:0009696|salicylic acid metabolic process;GO:0016788|hydrolase activity, acting on ester bonds;GO:0009627|systemic acquired resistance;GO:0009817|defense response to fungus, incompatible interaction;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1287:GhM_A11G2728.1,GhM_A11G2729.1;TA2616:GhM_D11G2737.1,GhM_D11G2738.1 | AT1G31350 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1294:GhM_A11G2974.1,GhM_A11G2975.1;TA2623:GhM_D11G2911.1,GhM_D11G2912.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1304:GhM_A11G3199.1,GhM_A11G3200.1;TA2629:GhM_D11G3117.1,GhM_D11G3118.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1308:GhM_A11G3247.1,GhM_A11G3248.1;TA2633:GhM_D11G3168.1,GhM_D11G3169.1 | AT1G55370||AT1G64770 | NDF5; carbohydrate binding / catalytic||NDF2; NDF2 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); carbohydrate binding / catalytic | GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0010628|positive regulation of gene expression;GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone);GO:0030246|carbohydrate binding;GO:0009773|photosynthetic electron transport in photosystem I;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1311:GhM_A11G3278.1,GhM_A11G3279.1;TA2635:GhM_D11G3203.1,GhM_D11G3204.1 | AT2G48010 | RKF3; RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3); kinase/ receptor signaling protein serine/threonine kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0004702|receptor signaling protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation | - | 4 | 2 | Gossypium | Cotton | |||
| TA1312:GhM_A11G3311.1,GhM_A11G3314.1;TA2637:GhM_D11G3233.1,GhM_D11G3235.1 | AT1G08980 | ATAMI1, AMI1, ATTOC64-I; AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | GO:0004040|amidase activity;GO:0005737|cytoplasm;GO:0043864|indoleacetamide hydrolase activity;GO:0009684|indoleacetic acid biosynthetic process;GO:0016810|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | - | 4 | 2 | Gossypium | Cotton | |||
| TA1314:GhM_A11G3385.1,GhM_A11G3386.1;TA2639:GhM_D11G3296.1,GhM_D11G3297.1 | AT1G09155 | AtPP2-B15; AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding | GO:0030246|carbohydrate binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1319:GhM_A11G3521.1,GhM_A11G3522.1;TA2645:GhM_D11G3443.1,GhM_D11G3444.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1320:GhM_A11G3523.1,GhM_A11G3524.1;TA2646:GhM_D11G3445.1,GhM_D11G3446.1 | AT5G54540 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP012943 (InterPro:IPR016606); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25170.1); Has 60 Blast hits to 60 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1327:GhM_A11G3681.1,GhM_A11G3683.1;TA2657:GhM_D11G3601.1,GhM_D11G3603.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1330:GhM_A11G3760.1,GhM_A11G3761.1;TA2661:GhM_D11G3682.1,GhM_D11G3684.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1332:GhM_A11G3841.1,GhM_A11G3842.1;TA2665:GhM_D11G3757.1,GhM_D11G3758.1 | AT1G31812 | ACBP6, ACBP; ACBP6 (acyl-CoA-binding protein 6); acyl-CoA binding / phosphatidylcholine binding | GO:0000062|acyl-CoA binding;GO:0031210|phosphatidylcholine binding;GO:0050826|response to freezing;GO:0006869|lipid transport;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA1333:GhM_A11G3852.1,GhM_A11G3853.1;TA2666:GhM_D11G3769.1,GhM_D11G3770.1 | AT2G41010 | ATCAMBP25; ATCAMBP25 (ARABIDOPSIS THALIANA CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA); calmodulin binding | GO:0010337|regulation of salicylic acid metabolic process;GO:0005634|nucleus;GO:0005516|calmodulin binding;GO:0009651|response to salt stress;GO:0009414|response to water deprivation | - | 4 | 2 | Gossypium | Cotton | |||
| TA1337:GhM_A11G3942.1,GhM_A11G3943.1;TA2667:GhM_D11G3851.1,GhM_D11G3852.1 | AT2G42310 | unknown protein | GO:0008150|biological_process;GO:0005747|mitochondrial respiratory chain complex I;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0045271|respiratory chain complex I | - | 4 | 2 | Gossypium | Cotton | |||
| TA1352:GhM_A12G0229.1,GhM_A12G0230.1;TA2680:GhM_D12G0238.1,GhM_D12G0240.1 | AT4G34260 | FUC95A; FUC95A; 1,2-alpha-L-fucosidase | GO:0012505|endomembrane system;GO:0047513|1,2-alpha-L-fucosidase activity;GO:0008150|biological_process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1361:GhM_A12G0441.1,GhM_A12G0443.1;TA2688:GhM_D12G0353.1,GhM_D12G0354.1 | AT2G37170||AT3G53420||AT5G47450 | PIP2A, PIP2, PIP2;1; PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel||PIP2B, PIP2;2; PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel||ATTIP2;3, TIP2;3, DELTA-TIP3; AtTIP2;3; ammonia transporter/ methylammonium transmembrane transporter/ water channel | GO:0015250|water channel activity;GO:0009507|chloroplast;GO:0006810|transport;GO:0006833|water transport;GO:0015200|methylammonium transmembrane transporter activity;GO:0009651|response to salt stress;GO:0042807|central vacuole;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0009705|plant-type vacuole membrane;GO:0016020|membrane;GO:0005773|vacuole;GO:0051739|ammonia transmembrane transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1366:GhM_A12G0540.1,GhM_A12G0544.1;TA2693:GhM_D12G0534.1,GhM_D12G0539.1 | AT1G20823||AT3G10910 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0010200|response to chitin | - | 4 | 2 | Gossypium | Cotton | |||
| TA1373:GhM_A12G0833.1,GhM_A12G0836.1;TA2702:GhM_D12G1101.1,GhM_D12G1104.1 | AT3G50370 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1378:GhM_A12G0922.1,GhM_A12G0923.1;TA2701:GhM_D12G1071.1,GhM_D12G1072.1 | AT5G24010 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1380:GhM_A12G1046.1,GhM_A12G1047.1;TA2700:GhM_D12G1000.1,GhM_D12G1001.1 | AT2G22850 | AtbZIP6; AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 4 | 2 | Gossypium | Cotton | |||
| TA1395:GhM_A12G1514.1,GhM_A12G1515.1;TA2715:GhM_D12G1457.1,GhM_D12G1458.1 | AT1G32640||AT5G46760 | ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1; MYC2; DNA binding / transcription activator/ transcription factor||basic helix-loop-helix (bHLH) family protein | GO:0048364|root development;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0009867|jasmonic acid mediated signaling pathway;GO:0009963|positive regulation of flavonoid biosynthetic process;GO:0009759|indole glucosinolate biosynthetic process;GO:0045941|positive regulation of transcription;GO:0002213|defense response to insect;GO:0009269|response to desiccation;GO:0009737|response to abscisic acid stimulus;GO:0003700|transcription factor activity;GO:0051090|regulation of transcription factor activity;GO:0005515|protein binding;GO:0016563|transcription activator activity;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0009611|response to wounding;GO:0043619|regulation of transcription from RNA polymerase II promoter in response to oxidative stress;GO:0006568|tryptophan metabolic process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1398:GhM_A12G1572.1,GhM_A12G1573.1;TA2719:GhM_D12G1524.1,GhM_D12G1525.1 | AT2G47010 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1401:GhM_A12G1712.1,GhM_A12G1713.1;TA2723:GhM_D12G1660.1,GhM_D12G1661.1 | AT3G05500||AT2G47780 | rubber elongation factor (REF) family protein||rubber elongation factor (REF) protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005773|vacuole;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1402:GhM_A12G1764.1,GhM_A12G1768.1;TA2724:GhM_D12G1711.1,GhM_D12G1715.1 | AT2G31180||AT4G21440 | ATMYB102, ATM4; ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor||ATMYB14, MYB14AT, MYB14; MYB14 (MYB DOMAIN PROTEIN 14); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0045449|regulation of transcription;GO:0009733|response to auxin stimulus;GO:0006970|response to osmotic stress;GO:0009611|response to wounding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0009753|response to jasmonic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus | - | 4 | 2 | Gossypium | Cotton | |||
| TA1408:GhM_A12G2065.1,GhM_A12G2066.1;TA2732:GhM_D12G1968.1,GhM_D12G1969.1 | AT2G38100||AT3G54450||AT2G37900 | proton-dependent oligopeptide transport (POT) family protein||transporter | GO:0012505|endomembrane system;GO:0015210|uracil transmembrane transporter activity;GO:0015171|amino acid transmembrane transporter activity;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1423:GhM_A12G2480.1,GhM_A12G2483.1;TA2741:GhM_D12G2365.1,GhM_D12G2367.1 | AT1G69940||AT5G61680 | pectinesterase family protein||ATPPME1, PPME1; PPME1; pectinesterase | GO:0009860|pollen tube growth;GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0005794|Golgi apparatus;GO:0005618|cell wall;GO:0030599|pectinesterase activity;GO:0005783|endoplasmic reticulum | - | 4 | 2 | Gossypium | Cotton | |||
| TA1425:GhM_A12G2497.1,GhM_A12G2498.1;TA2742:GhM_D12G2380.1,GhM_D12G2381.1 | AT5G07610 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1433:GhM_A12G2831.1,GhM_A12G2833.1;TA2746:GhM_D12G2718.1,GhM_D12G2720.1 | AT4G11640 | ATSR; ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE); serine racemase | GO:0030378|serine racemase activity;GO:0009069|serine family amino acid metabolic process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1437:GhM_A12G2994.1,GhM_A12G2995.1;TA2750:GhM_D12G2880.1,GhM_D12G2881.1 | AT5G19790 | RAP2.11; RAP2.11 (related to AP2 11); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 4 | 2 | Gossypium | Cotton | |||
| TA1438:GhM_A12G3024.1,GhM_A12G3025.1;TA2751:GhM_D12G2911.1,GhM_D12G2913.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1446:GhM_A12G3279.1,GhM_A12G3284.1;TA2761:GhM_D12G3166.1,GhM_D12G3171.1 | AT4G02750 | pentatricopeptide (PPR) repeat-containing protein | GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1448:GhM_A12G3343.1,GhM_A12G3345.1;TA2763:GhM_D12G3228.1,GhM_D12G3230.1 | AT5G14740 | CA2, CA18, BETA CA2; CA2 (CARBONIC ANHYDRASE 2); carbonate dehydratase/ zinc ion binding | GO:0042742|defense response to bacterium;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0004089|carbonate dehydratase activity;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0015976|carbon utilization;GO:0005829|cytosol;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1453:GhM_A13G0080.1,GhM_A13G0081.1;TA2767:GhM_D13G0086.1,GhM_D13G0088.1 | AT5G01670 | aldose reductase, putative | GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1460:GhM_A13G0302.1,GhM_A13G0303.1;TA2774:GhM_D13G0288.1,GhM_D13G0289.1 | AT1G68040 | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0008150|biological_process;GO:0008168|methyltransferase activity;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1470:GhM_A13G0598.1,GhM_A13G0602.1;TA2789:GhM_D13G0780.1,GhM_D13G0783.1 | AT1G68660 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adaptor protein ClpS, core (InterPro:IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719); Has 513 Blast hits to 513 proteins in 129 species: Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). | GO:0030163|protein catabolic process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1471:GhM_A13G0600.1,GhM_A13G0601.1;TA2790:GhM_D13G0781.1,GhM_D13G0782.1 | AT1G68650 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1474:GhM_A13G0743.1,GhM_A13G0744.1;TA2784:GhM_D13G0637.1,GhM_D13G0638.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1477:GhM_A13G0858.1,GhM_A13G0860.1;TA2791:GhM_D13G0800.1,GhM_D13G0803.1 | AT2G02790 | IQD29; IQD29 (IQ-domain 29); calmodulin binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005516|calmodulin binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1480:GhM_A13G0880.1,GhM_A13G0881.1;TA2792:GhM_D13G0824.1,GhM_D13G0825.1 | AT1G69690 | TCP family transcription factor, putative | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0009507|chloroplast | - | 4 | 2 | Gossypium | Cotton | |||
| TA1482:GhM_A13G0941.1,GhM_A13G0943.1;TA2794:GhM_D13G0893.1,GhM_D13G0896.1 | AT3G11810 | unknown protein | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1486:GhM_A13G1017.1,GhM_A13G1023.1;TA2795:GhM_D13G0904.1,GhM_D13G0905.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1488:GhM_A13G1196.1,GhM_A13G1198.1;TA2804:GhM_D13G1075.1,GhM_D13G1078.1 | AT3G43590 | zinc knuckle (CCHC-type) family protein | GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1498:GhM_A13G1628.1,GhM_A13G1629.1;TA2815:GhM_D13G1507.1,GhM_D13G1508.1 | AT1G72170||AT1G22520 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1499:GhM_A13G1635.1,GhM_A13G1639.1;TA2816:GhM_D13G1514.1,GhM_D13G1517.1 | AT1G72100||AT1G22600 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, sperm cell, embryo, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT1G72100.1); Has 126 Blast hits to 123 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 63; Fungi - 8; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||late embryogenesis abundant domain-containing protein / LEA domain-containing protein | GO:0012505|endomembrane system;GO:0009793|embryonic development ending in seed dormancy;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1500:GhM_A13G1682.1,GhM_A13G1683.1;TA2817:GhM_D13G1559.1,GhM_D13G1560.1 | AT5G33340 | CDR1; CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase | GO:0010337|regulation of salicylic acid metabolic process;GO:0048046|apoplast;GO:0010310|regulation of hydrogen peroxide metabolic process;GO:0006508|proteolysis;GO:0042742|defense response to bacterium | - | 4 | 2 | Gossypium | Cotton | |||
| TA1501:GhM_A13G1693.1,GhM_A13G1694.1;TA2818:GhM_D13G1568.1,GhM_D13G1569.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1503:GhM_A13G1766.1,GhM_A13G1767.1;TA2820:GhM_D13G1643.1,GhM_D13G1644.1 | AT4G26485||AT1G55790 | ||ATP binding / nucleotide binding / phenylalanine-tRNA ligase | ;GO:0006432|phenylalanyl-tRNA aminoacylation;GO:0000166|nucleotide binding;GO:0005737|cytoplasm;GO:0006412|translation;GO:0004826|phenylalanine-tRNA ligase activity;GO:0005524|ATP binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1517:GhM_A13G2105.1,GhM_A13G2106.1;TA2827:GhM_D13G1992.1,GhM_D13G1993.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1521:GhM_A13G2195.1,GhM_A13G2196.1;TA2831:GhM_D13G2081.1,GhM_D13G2082.1 | AT4G38040 | exostosin family protein | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0009507|chloroplast;GO:0016020|membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1524:GhM_A13G2209.1,GhM_A13G2210.1;TA2833:GhM_D13G2096.1,GhM_D13G2097.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1532:GhM_A13G2550.1,GhM_A13G2551.1;TA2850:GhM_D13G2463.1,GhM_D13G2464.1 | AT4G26130||AT2G26110||AT5G56980 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1533:GhM_A13G2573.1,GhM_A13G2574.1;TA2851:GhM_D13G2487.1,GhM_D13G2488.1 | AT5G52140||AT3G30460 | zinc finger (C3HC4-type RING finger) family protein||protein binding / zinc ion binding | GO:0005515|protein binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1541:GhM_A13G2845.1,GhM_A13G2846.1;TA2859:GhM_D13G2726.1,GhM_D13G2727.1 | AT5G60410 | ATSIZ1, SIZ1; SIZ1; DNA binding / SUMO ligase | GO:0019789|SUMO ligase activity;GO:0051301|cell division;GO:0010337|regulation of salicylic acid metabolic process;GO:0005634|nucleus;GO:0040007|growth;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0016049|cell growth;GO:0050826|response to freezing;GO:0003677|DNA binding;GO:0009910|negative regulation of flower development;GO:0009414|response to water deprivation;GO:0009787|regulation of abscisic acid mediated signaling pathway | - | 4 | 2 | Gossypium | Cotton | |||
| TA1542:GhM_A13G2885.1,GhM_A13G2886.1;TA2862:GhM_D13G2786.1,GhM_D13G2787.1 | AT2G29730 | UGT71D1; UGT71D1 (UDP-GLUCOSYL TRANSFERASE 71D1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008194|UDP-glycosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1545:GhM_D01G0012.1,GhM_D01G0013.1;TA2093:GhM_A01G0028.1,GhM_A01G0029.1 | AT3G06470 | GNS1/SUR4 membrane family protein | GO:0008150|biological_process;GO:0016021|integral to membrane;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1552:GhM_D01G0195.1,GhM_D01G0196.1;TA2098:GhM_A01G0217.1,GhM_A01G0218.1 | AT1G03790 | SOM; SOM (SOMNUS); nucleic acid binding / transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003676|nucleic acid binding;GO:0003700|transcription factor activity;GO:0010187|negative regulation of seed germination | - | 4 | 2 | Gossypium | Cotton | |||
| TA1554:GhM_D01G0240.1,GhM_D01G0242.1;TA2101:GhM_A01G0274.1,GhM_A01G0275.1 | AT4G14430 | IBR10, ATECI2, ECI2, ECHIB, PEC12; IBR10 (INDOLE-3-BUTYRIC ACID RESPONSE 10); catalytic/ dodecenoyl-CoA delta-isomerase | GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0009062|fatty acid catabolic process;GO:0004165|dodecenoyl-CoA delta-isomerase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1567:GhM_D01G0487.1,GhM_D01G0488.1;TA2116:GhM_A01G0505.1,GhM_A01G0508.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1570:GhM_D01G0545.1,GhM_D01G0546.1;TA2119:GhM_A01G0577.1,GhM_A01G0578.1 | AT1G78830||AT1G78860||AT1G78850 | curculin-like (mannose-binding) lectin family protein | GO:0009505|plant-type cell wall;GO:0005529|sugar binding;GO:0048046|apoplast;GO:0005618|cell wall;GO:0005886|plasma membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1573:GhM_D01G0622.1,GhM_D01G0623.1;TA2121:GhM_A01G0656.1,GhM_A01G0657.1 | AT1G43780 | scpl44; scpl44 (serine carboxypeptidase-like 44); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | - | 4 | 2 | Gossypium | Cotton | |||
| TA1574:GhM_D01G0642.1,GhM_D01G0643.1;TA2122:GhM_A01G0680.1,GhM_A01G0681.1 | AT1G49220||AT3G18930 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1581:GhM_D01G0774.1,GhM_D01G0783.1;TA2129:GhM_A01G0809.1,GhM_A01G0820.1 | AT3G59200||AT5G22600 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G22610.1); Has 491 Blast hits to 482 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 483; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1584:GhM_D01G0794.1,GhM_D01G0796.1;TA2133:GhM_A01G0831.1,GhM_A01G0833.1 | AT4G22280||AT4G14096||AT3G59240||AT4G10420 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G10400.2); Has 664 Blast hits to 644 proteins in 11 species: Archae - 0; Bacteria - 8; Metazoa - 17; Fungi - 0; Plants - 639; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G14103.1); Has 1300 Blast hits to 1271 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1587:GhM_D01G0950.1,GhM_D01G0953.1;TA2136:GhM_A01G0985.1,GhM_A01G0986.1 | AT1G55850 | ATCSLE1, CSLE1; ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups | GO:0016759|cellulose synthase activity;GO:0030244|cellulose biosynthetic process;GO:0000271|polysaccharide biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0005886|plasma membrane;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005783|endoplasmic reticulum | - | 4 | 2 | Gossypium | Cotton | |||
| TA1589:GhM_D01G1021.1,GhM_D01G1022.1;TA2138:GhM_A01G1054.1,GhM_A01G1055.1 | AT1G79550||AT1G56190 | PGK; PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase||phosphoglycerate kinase, putative | GO:0009507|chloroplast;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0004618|phosphoglycerate kinase activity;GO:0005829|cytosol;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0006096|glycolysis | - | 4 | 2 | Gossypium | Cotton | |||
| TA1590:GhM_D01G1037.1,GhM_D01G1046.1;TA2141:GhM_A01G1077.1,GhM_A01G1084.1 | AT4G00231 | MEE50; MEE50 (maternal effect embryo arrest 50); binding | GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1591:GhM_D01G1143.1,GhM_D01G1144.1;TA2144:GhM_A01G1169.1,GhM_A01G1170.1 | AT2G17080||AT2G17070 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1592:GhM_D01G1156.1,GhM_D01G1157.1;TA2145:GhM_A01G1181.1,GhM_A01G1182.1 | AT1G76140||AT1G20380 | prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative||serine-type endopeptidase/ serine-type peptidase | GO:0009507|chloroplast;GO:0004252|serine-type endopeptidase activity;GO:0008236|serine-type peptidase activity;GO:0006508|proteolysis;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1594:GhM_D01G1326.1,GhM_D01G1327.1;TA2148:GhM_A01G1354.1,GhM_A01G1357.1 | AT3G19320||AT4G06744 | leucine-rich repeat family protein||leucine-rich repeat family protein / extensin family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1613:GhM_D01G2210.1,GhM_D01G2212.1;TA2178:GhM_A01G2251.1,GhM_A01G2253.1 | AT2G14610||AT1G50060||AT2G19990 | PR-1-LIKE; PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE)||PR1, PR 1, ATPR1; PR1 (PATHOGENESIS-RELATED GENE 1)||pathogenesis-related protein, putative | GO:0012505|endomembrane system;GO:0010266|response to vitamin B1;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0009627|systemic acquired resistance;GO:0006952|defense response;GO:0009753|response to jasmonic acid stimulus;GO:0005576|extracellular region;GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA1619:GhM_D01G2540.1,GhM_D01G2543.1;TA2188:GhM_A01G2612.1,GhM_A01G2615.1 | AT5G03790 | ATHB51, LMI1, HB51; HB51; DNA binding / sequence-specific DNA binding / transcription factor | GO:0009965|leaf morphogenesis;GO:0005634|nucleus;GO:0043565|sequence-specific DNA binding;GO:0045941|positive regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0010434|bract formation | - | 4 | 2 | Gossypium | Cotton | |||
| TA1621:GhM_D01G2555.1,GhM_D01G2556.1;TA2190:GhM_A01G2630.1,GhM_A01G2631.1 | AT2G36720 | PHD finger transcription factor, putative | GO:0005515|protein binding;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1629:GhM_D01G2771.1,GhM_D01G2772.1;TA2197:GhM_A01G2846.1,GhM_A01G2847.1 | AT3G51680 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1631:GhM_D02G0023.1,GhM_D02G0026.1;TA2867:GhM_A02G0014.1,GhM_A02G0017.1 | AT3G08640 | alphavirus core protein family | GO:0008150|biological_process;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1649:GhM_D02G0384.1,GhM_D02G0386.1;TA2884:GhM_A02G0360.1,GhM_A02G0361.1 | AT3G22600||AT4G14815||AT2G48130 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0008289|lipid binding;GO:0031225|anchored to membrane;GO:0006869|lipid transport | - | 4 | 2 | Gossypium | Cotton | |||
| TA1658:GhM_D02G0527.1,GhM_D02G0528.1;TA2895:GhM_A02G0541.1,GhM_A02G0542.1 | AT5G07900 | mitochondrial transcription termination factor family protein / mTERF family protein | GO:0016020|membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1664:GhM_D02G0682.1,GhM_D02G0683.1;TA2897:GhM_A02G0683.1,GhM_A02G0684.1 | AT1G11910||AT1G62290 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0009651|response to salt stress;GO:0005773|vacuole;GO:0006629|lipid metabolic process | - | 4 | 2 | Gossypium | Cotton | |||
| TA1673:GhM_D02G0847.1,GhM_D02G0848.1;TA2901:GhM_A02G0858.1,GhM_A02G0859.1 | AT1G44130 | nucellin protein, putative | GO:0006508|proteolysis;GO:0009505|plant-type cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA1676:GhM_D02G0927.1,GhM_D02G0929.1;TA2903:GhM_A02G0931.1,GhM_A02G0932.1 | AT1G58120 | unknown protein | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1679:GhM_D02G1005.1,GhM_D02G1006.1;TA2995:GhM_A03G1094.1,GhM_A03G1096.1 | AT2G43290 | MSS3; MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding | GO:0008150|biological_process;GO:0005509|calcium ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1691:GhM_D02G1836.1,GhM_D02G1838.1;TA3011:GhM_A03G1749.1,GhM_A03G1751.1 | AT1G24430 | transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1692:GhM_D02G1862.1,GhM_D02G1863.1;TA3012:GhM_A03G1784.1,GhM_A03G1786.1 | AT3G01680||AT1G67790 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1697:GhM_D02G1963.1,GhM_D02G1964.1;TA3015:GhM_A03G1911.1,GhM_A03G1912.1 | AT5G40210||AT1G70260 | nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1702:GhM_D02G2380.1,GhM_D02G2381.1;TA3025:GhM_A03G2361.1,GhM_A03G2362.1 | AT2G14170 | ALDH6B2; ALDH6B2; 3-chloroallyl aldehyde dehydrogenase/ methylmalonate-semialdehyde dehydrogenase (acylating)/ oxidoreductase | GO:0004028|3-chloroallyl aldehyde dehydrogenase activity;GO:0006979|response to oxidative stress;GO:0005507|copper ion binding;GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1706:GhM_D02G2539.1,GhM_D02G2540.1;TA3029:GhM_A03G2516.1,GhM_A03G2517.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1707:GhM_D02G2541.1,GhM_D02G2542.1;TA3028:GhM_A03G2515.1,GhM_A03G2518.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1718:GhM_D03G0030.1,GhM_D03G0034.1;TA2949:GhM_A02G2236.1,GhM_A02G2240.1 | AT2G17650||AT1G20560 | AAE1; AAE1 (ACYL ACTIVATING ENZYME 1); AMP binding||AMP-dependent synthetase and ligase family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1723:GhM_D03G0144.1,GhM_D03G0145.1;TA2946:GhM_A02G2122.1,GhM_A02G2123.1 | AT5G49555 | amine oxidase-related | GO:0005507|copper ion binding;GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1726:GhM_D03G0181.1,GhM_D03G0182.1;TA2944:GhM_A02G2079.1,GhM_A02G2080.1 | AT5G41720||AT1G64290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1729:GhM_D03G0221.1,GhM_D03G0223.1;TA2943:GhM_A02G2044.1,GhM_A02G2045.1 | AT5G66815||AT2G23440 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1733:GhM_D03G0344.1,GhM_D03G0345.1;TA2937:GhM_A02G1917.1,GhM_A02G1918.1 | AT4G37850 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1735:GhM_D03G0406.1,GhM_D03G0407.1;TA2935:GhM_A02G1855.1,GhM_A02G1856.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1737:GhM_D03G0461.1,GhM_D03G0462.1;TA2927:GhM_A02G1737.1,GhM_A02G1738.1 | AT1G22160||AT1G78020 | senescence-associated protein-related | GO:0008150|biological_process;;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1738:GhM_D03G0476.1,GhM_D03G0477.1;TA2928:GhM_A02G1751.1,GhM_A02G1752.1 | AT5G65207 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1741:GhM_D03G0513.1,GhM_D03G0515.1;TA2930:GhM_A02G1791.1,GhM_A02G1792.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1743:GhM_D03G0568.1,GhM_D03G0569.1;TA2932:GhM_A02G1836.1,GhM_A02G1837.1 | AT3G02970 | EXL6; EXL6 (EXORDIUM LIKE 6) | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1744:GhM_D03G0573.1,GhM_D03G0574.1;TA2934:GhM_A02G1844.1,GhM_A02G1846.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1757:GhM_D03G1196.1,GhM_D03G1198.1;TA2990:GhM_A03G0962.1,GhM_A03G0964.1 | AT1G73880 | UGT89B1; UGT89B1 (UDP-GLUCOSYL TRANSFERASE 89B1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl group | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1760:GhM_D03G1269.1,GhM_D03G1271.1;TA2986:GhM_A03G0832.1,GhM_A03G0833.1 | AT5G61680 | pectinesterase family protein | GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0042545|cell wall modification;GO:0005618|cell wall;GO:0030599|pectinesterase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1762:GhM_D03G1387.1,GhM_D03G1389.1;TA2982:GhM_A03G0720.1,GhM_A03G0722.1 | AT5G63520 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FIST domain, N-terminal (InterPro:IPR013702); Has 96 Blast hits to 96 proteins in 46 species: Archae - 0; Bacteria - 72; Metazoa - 6; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1772:GhM_D03G1559.1,GhM_D03G1564.1;TA2975:GhM_A03G0566.1,GhM_A03G0568.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1774:GhM_D03G1582.1,GhM_D03G1583.1;TA2974:GhM_A03G0546.1,GhM_A03G0547.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1775:GhM_D03G1615.1,GhM_D03G1619.1;TA2972:GhM_A03G0511.1,GhM_A03G0513.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1782:GhM_D03G1845.1,GhM_D03G1846.1;TA2964:GhM_A03G0271.1,GhM_A03G0272.1 | AT1G04540 | C2 domain-containing protein | GO:0008150|biological_process;GO:0016020|membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1792:GhM_D03G2061.1,GhM_D03G2062.1;TA2956:GhM_A03G0042.1,GhM_A03G0043.1 | AT5G46880 | HB-7, HDG5; HB-7 (HOMEOBOX-7); DNA binding / transcription factor | GO:0045449|regulation of transcription | - | 4 | 2 | Gossypium | Cotton | |||
| TA1793:GhM_D04G0030.1,GhM_D04G0031.1;TA3254:GhM_A05G4916.1,GhM_A05G4917.1 | AT5G24230 | LOCATED IN: cellular_component unknown; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: triacylglycerol lipase (TAIR:AT5G24200.1); Has 125 Blast hits to 125 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1795:GhM_D04G0076.1,GhM_D04G0077.1;TA3253:GhM_A05G4872.1,GhM_A05G4873.1 | AT3G26040||AT5G47950 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1796:GhM_D04G0085.1,GhM_D04G0089.1;TA3251:GhM_A05G4860.1,GhM_A05G4863.1 | AT4G29870 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: membrane protein, putative (TAIR:AT2G19340.2); Has 163 Blast hits to 163 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1801:GhM_D04G0275.1,GhM_D04G0276.1;TA3245:GhM_A05G4669.1,GhM_A05G4671.1 | AT1G17860 | trypsin and protease inhibitor family protein / Kunitz family protein | GO:0008150|biological_process;GO:0048046|apoplast;GO:0004866|endopeptidase inhibitor activity;GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA1803:GhM_D04G0385.1,GhM_D04G0386.1;TA3243:GhM_A05G4564.1,GhM_A05G4565.1 | AT5G20680||AT5G64020 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system | - | 4 | 2 | Gossypium | Cotton | |||
| TA1804:GhM_D04G0437.1,GhM_D04G0438.1;TA3242:GhM_A05G4510.1,GhM_A05G4511.1 | AT3G58800 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1805:GhM_D04G0475.1,GhM_D04G0481.1;TA3239:GhM_A05G4466.1,GhM_A05G4475.1 | AT3G58670 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1807:GhM_D04G0553.1,GhM_D04G0560.1;TA3233:GhM_A05G4383.1,GhM_A05G4390.1 | AT5G39670 | calcium-binding EF hand family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005509|calcium ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1811:GhM_D04G0635.1,GhM_D04G0636.1;TA3227:GhM_A05G4298.1,GhM_A05G4301.1 | AT3G28007||AT4G10850 | nodulin MtN3 family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0016021|integral to membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1817:GhM_D04G0922.1,GhM_D04G0925.1;TA3220:GhM_A05G4031.1,GhM_A05G4033.1 | AT2G36430||AT3G50120 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1822:GhM_D04G1163.1,GhM_D04G1164.1;TA3069:GhM_A04G0625.1,GhM_A04G0626.1 | AT3G26040 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1829:GhM_D04G1492.1,GhM_D04G1493.1;TA3079:GhM_A04G1038.1,GhM_A04G1039.1 | AT2G16190||AT1G49330 | hydroxyproline-rich glycoprotein family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 39 Blast hits to 39 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 5; Plants - 27; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1835:GhM_D04G1711.1,GhM_D04G1712.1;TA3085:GhM_A04G1227.1,GhM_A04G1228.1 | AT1G07080||AT5G01580 | gamma interferon responsive lysosomal thiol reductase family protein / GILT family protein||OSH1; OSH1 (OAS HIGH ACCUMULATION 1); catalytic | GO:0008150|biological_process;GO:0003824|catalytic activity;GO:0005773|vacuole;GO:0012505|endomembrane system | - | 4 | 2 | Gossypium | Cotton | |||
| TA1842:GhM_D04G1888.1,GhM_D04G1889.1;TA3091:GhM_A04G1400.1,GhM_A04G1401.1 | AT3G11010||AT3G53240||AT1G74170||AT1G74180 | AtRLP14; AtRLP14 (Receptor Like Protein 14); protein binding||AtRLP45; AtRLP45 (Receptor Like Protein 45); protein binding||AtRLP13; AtRLP13 (Receptor Like Protein 13); protein binding||AtRLP34; AtRLP34 (Receptor Like Protein 34); kinase/ protein binding | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA1843:GhM_D04G1944.1,GhM_D04G1945.1;TA3093:GhM_A04G1455.1,GhM_A04G1456.1 | AT2G17570 | undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein | GO:0016765|transferase activity, transferring alkyl or aryl (other than methyl) groups | - | 4 | 2 | Gossypium | Cotton | |||
| TA1846:GhM_D04G2026.1,GhM_D04G2027.1;TA3097:GhM_A04G1546.1,GhM_A04G1547.1 | AT1G29962||AT3G04100 | AGL64; AGL64 (AGAMOUS-LIKE 64); transcription factor||AGL57; AGL57; DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 4 | 2 | Gossypium | Cotton | |||
| TA1855:GhM_D04G2125.1,GhM_D04G2127.1;TA3102:GhM_A04G1642.1,GhM_A04G1643.1 | AT2G17070||AT4G35200 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1857:GhM_D04G2158.1,GhM_D04G2160.1;TA3105:GhM_A04G1673.1,GhM_A04G1674.1 | AT4G37850 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1858:GhM_D04G2168.1,GhM_D04G2169.1;TA3106:GhM_A04G1690.1,GhM_A04G1691.1 | AT1G49410 | TOM6; TOM6 (translocase of the outer mitochondrial membrane 6) | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1861:GhM_D04G2211.1,GhM_D04G2233.1;TA3107:GhM_A04G1737.1,GhM_A04G1754.1 | AT1G78560 | bile acid:sodium symporter family protein | GO:0009507|chloroplast;GO:0008508|bile acid:sodium symporter activity;GO:0006814|sodium ion transport;GO:0016020|membrane;GO:0005215|transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1864:GhM_D04G2320.1,GhM_D04G2321.1;TA3111:GhM_A04G1848.1,GhM_A04G1849.1 | AT4G10310 | HKT1, ATHKT1; HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1); sodium ion transmembrane transporter | GO:0015081|sodium ion transmembrane transporter activity;GO:0006970|response to osmotic stress;GO:0006813|potassium ion transport;GO:0009651|response to salt stress;GO:0006814|sodium ion transport;GO:0005886|plasma membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA1871:GhM_D05G0170.1,GhM_D05G0172.1;TA3116:GhM_A05G0162.1,GhM_A05G0163.1 | AT5G20230||AT3G17675 | copper ion binding / electron carrier||ATBCB, BCB; ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN); copper ion binding / electron carrier | GO:0005507|copper ion binding;GO:0006979|response to oxidative stress;GO:0015690|aluminum ion transport;GO:0046658|anchored to plasma membrane;GO:0009611|response to wounding;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0009646|response to absence of light;GO:0005773|vacuole;GO:0009055|electron carrier activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1878:GhM_D05G0383.1,GhM_D05G0385.1;TA3122:GhM_A05G0364.1,GhM_A05G0366.1 | AT5G21940||AT3G43850 | unknown protein | GO:0008150|biological_process;GO:0005773|vacuole;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1887:GhM_D05G0634.1,GhM_D05G0635.1;TA3131:GhM_A05G0615.1,GhM_A05G0616.1 | AT5G25310||AT5G11130 | catalytic||exostosin family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003824|catalytic activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1888:GhM_D05G0651.1,GhM_D05G0656.1;TA3132:GhM_A05G0634.1,GhM_A05G0639.1 | AT4G31930 | mitochondrial glycoprotein family protein / MAM33 family protein | GO:0005739|mitochondrion | - | 4 | 2 | Gossypium | Cotton | |||
| TA1889:GhM_D05G0668.1,GhM_D05G0669.1;TA3133:GhM_A05G0648.1,GhM_A05G0649.1 | AT1G80840 | WRKY40, ATWRKY40; WRKY40; transcription factor | GO:0005515|protein binding;GO:0050691|regulation of defense response to virus by host;GO:0031347|regulation of defense response;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0009611|response to wounding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium | - | 4 | 2 | Gossypium | Cotton | |||
| TA1890:GhM_D05G0764.1,GhM_D05G0765.1;TA3135:GhM_A05G0739.1,GhM_A05G0740.1 | AT1G07250 | UGT71C4; UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4); quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0035251|UDP-glucosyltransferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1901:GhM_D05G1260.1,GhM_D05G1261.1;TA3145:GhM_A05G1241.1,GhM_A05G1242.1 | AT3G51600 | LTP5; LTP5 (Lipid transfer protein 5); lipid transporter | GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA1904:GhM_D05G1304.1,GhM_D05G1305.1;TA3148:GhM_A05G1287.1,GhM_A05G1288.1 | AT1G32910||AT1G78990 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1918:GhM_D05G1820.1,GhM_D05G1821.1;TA3160:GhM_A05G1805.1,GhM_A05G1806.1 | AT1G28310||AT5G60850 | Dof-type zinc finger domain-containing protein||OBP4; OBP4; DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0045449|regulation of transcription | - | 4 | 2 | Gossypium | Cotton | |||
| TA1919:GhM_D05G1848.1,GhM_D05G1849.1;TA3161:GhM_A05G1834.1,GhM_A05G1835.1 | AT1G61120 | TPS04, GES; TPS04 (TERPENE SYNTHASE 04); (E,E)-geranyllinalool synthase | GO:0009753|response to jasmonic acid stimulus;GO:0016102|diterpenoid biosynthetic process;GO:0000304|response to singlet oxygen;GO:0009611|response to wounding | - | 4 | 2 | Gossypium | Cotton | |||
| TA1924:GhM_D05G1950.1,GhM_D05G1951.1;TA3164:GhM_A05G1938.1,GhM_A05G1939.1 | AT1G11925 | Encodes a Stigma-specific Stig1 family protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1943:GhM_D05G2683.1,GhM_D05G2685.1;TA3182:GhM_A05G2673.1,GhM_A05G2674.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1945:GhM_D05G2728.1,GhM_D05G2729.1;TA3185:GhM_A05G2729.1,GhM_A05G2730.1 | AT1G76880 | trihelix DNA-binding protein, putative | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1952:GhM_D05G3043.1,GhM_D05G3046.1;TA3192:GhM_A05G3045.1,GhM_A05G3046.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA1953:GhM_D05G3063.1,GhM_D05G3064.1;TA3193:GhM_A05G3069.1,GhM_A05G3070.1 | AT1G29670||AT1G71691||AT1G29660 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0009507|chloroplast;GO:0016788|hydrolase activity, acting on ester bonds;GO:0005634|nucleus;GO:0006629|lipid metabolic process;GO:0048046|apoplast;GO:0005618|cell wall;GO:0004091|carboxylesterase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1957:GhM_D05G3154.1,GhM_D05G3155.1;TA3197:GhM_A05G3151.1,GhM_A05G3152.1 | AT1G68960 | unknown protein | GO:0008150|biological_process;GO:0005739|mitochondrion;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA1975:GhM_D05G3840.1,GhM_D05G3843.1;TA3066:GhM_A04G0545.1,GhM_A04G0548.1 | AT1G17310 | MADS-box protein (AGL100) | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | - | 4 | 2 | Gossypium | Cotton | |||
| TA1981:GhM_D05G3931.1,GhM_D05G3932.1;TA3061:GhM_A04G0441.1,GhM_A04G0442.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2004:GhM_D06G0032.1,GhM_D06G0034.1;TA3258:GhM_A06G0037.1,GhM_A06G0038.1 | AT3G57260||AT3G57240 | BG3; BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds||BGL2, PR2, BG2, PR-2; BGL2 (BETA-1,3-GLUCANASE 2); cellulase/ glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0005515|protein binding;GO:0004338|glucan 1,3-beta-glucosidase activity;GO:0008810|cellulase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009627|systemic acquired resistance;GO:0048046|apoplast;GO:0009617|response to bacterium;GO:0005618|cell wall;GO:0005773|vacuole;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA2011:GhM_D06G0189.1,GhM_D06G0190.1;TA3263:GhM_A06G0181.1,GhM_A06G0183.1 | AT1G76640 | calmodulin-related protein, putative | GO:0008150|biological_process;GO:0005737|cytoplasm;GO:0005509|calcium ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2018:GhM_D06G0383.1,GhM_D06G0384.1;TA3272:GhM_A06G0373.1,GhM_A06G0374.1 | AT1G72230||AT2G26720 | plastocyanin-like domain-containing protein||plastocyanin-like domain-containing protein / mavicyanin, putative | GO:0031225|anchored to membrane;GO:0005507|copper ion binding;GO:0009055|electron carrier activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2025:GhM_D06G0548.1,GhM_D06G0549.1;TA3279:GhM_A06G0540.1,GhM_A06G0541.1 | AT1G77410 | BGAL16; BGAL16 (beta-galactosidase 16); beta-galactosidase/ catalytic/ cation binding / sugar binding | GO:0012505|endomembrane system;GO:0005990|lactose catabolic process;GO:0003824|catalytic activity;GO:0005529|sugar binding;GO:0005975|carbohydrate metabolic process;GO:0019515|lactose catabolic process via UDP-galactose;GO:0043169|cation binding;GO:0004565|beta-galactosidase activity;GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase;GO:0009341|beta-galactosidase complex | - | 4 | 2 | Gossypium | Cotton | |||
| TA2028:GhM_D06G0607.1,GhM_D06G0608.1;TA3284:GhM_A06G0611.1,GhM_A06G0612.1 | AT1G03940||AT3G29635 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2030:GhM_D06G0870.1,GhM_D06G0872.1;TA3290:GhM_A06G0866.1,GhM_A06G0868.1 | AT4G29750 | RNA binding | GO:0003723|RNA binding;GO:0009507|chloroplast | - | 4 | 2 | Gossypium | Cotton | |||
| TA2034:GhM_D06G1029.1,GhM_D06G1033.1;TA3292:GhM_A06G1030.1,GhM_A06G1033.1 | AT5G51160||AT3G13950 | unknown protein||ankyrin repeat family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2040:GhM_D06G1304.1,GhM_D06G1308.1;TA3297:GhM_A06G1514.1,GhM_A06G1516.1 | AT2G24580 | sarcosine oxidase family protein | GO:0046653|tetrahydrofolate metabolic process;GO:0008115|sarcosine oxidase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2044:GhM_D06G1430.1,GhM_D06G1432.1;TA3295:GhM_A06G1409.1,GhM_A06G1411.1 | AT4G09730 | DEAD/DEAH box helicase, putative | GO:0009507|chloroplast;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005524|ATP binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2049:GhM_D06G1621.1,GhM_D06G1623.1;TA3304:GhM_A06G1666.1,GhM_A06G1667.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2055:GhM_D06G1791.1,GhM_D06G1792.1;TA3308:GhM_A06G1803.1,GhM_A06G1805.1 | AT5G46230 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2060:GhM_D06G2038.1,GhM_D06G2041.1;TA3312:GhM_A06G2056.1,GhM_A06G2058.1 | AT3G09950 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2069:GhM_D06G2239.1,GhM_D06G2245.1;TA3325:GhM_A06G2261.1,GhM_A06G2266.1 | AT5G04910 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2075:GhM_D06G2281.1,GhM_D06G2283.1;TA3328:GhM_A06G2286.1,GhM_A06G2289.1 | AT3G11450 | DNAJ heat shock N-terminal domain-containing protein / cell division protein-related | GO:0003677|DNA binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2079:GhM_D06G2321.1,GhM_D06G2322.1;TA3330:GhM_A06G2316.1,GhM_A06G2317.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2083:GhM_D06G2464.1,GhM_D06G2465.1;TA3337:GhM_A06G2467.1,GhM_A06G2468.1 | AT3G13850 | LBD22; LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22) | GO:0008150|biological_process;GO:0009507|chloroplast | - | 4 | 2 | Gossypium | Cotton | |||
| TA2085:GhM_D06G2565.1,GhM_D06G2566.1;TA3339:GhM_A06G2573.1,GhM_A06G2574.1 | AT1G28420 | HB-1; HB-1 (homeobox-1); transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent | - | 4 | 2 | Gossypium | Cotton | |||
| TA2086:GhM_D06G2572.1,GhM_D06G2573.1;TA3340:GhM_A06G2580.1,GhM_A06G2581.1 | AT4G32551||AT2G32700 | LUG, RON2; LUG (LEUNIG); protein binding / protein heterodimerization/ transcription repressor||LUH; WD-40 repeat family protein | GO:0005515|protein binding;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0009908|flower development;GO:0046982|protein heterodimerization activity;GO:0016481|negative regulation of transcription;GO:0016564|transcription repressor activity;GO:0009790|embryonic development;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2087:GhM_D06G2578.1,GhM_D06G2579.1;TA3342:GhM_A06G2587.1,GhM_A06G2588.1 | AT1G17420 | LOX3; LOX3; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | GO:0009507|chloroplast;GO:0016702|oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0005506|iron ion binding;GO:0016165|lipoxygenase activity;GO:0046872|metal ion binding;GO:0009055|electron carrier activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2168:GhM_A01G2068.1,GhM_A01G2069.1;TA2367:GhM_D09G0202.1,GhM_D09G0204.1 | AT4G38700 | disease resistance-responsive family protein | GO:0012505|endomembrane system | - | 4 | 2 | Gossypium | Cotton | |||
| TA2200:GhM_D07G0042.1,GhM_D07G0043.1;TA3348:GhM_A07G0038.1,GhM_A07G0039.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2203:GhM_D07G0268.1,GhM_D07G0269.1;TA3353:GhM_A07G0269.1,GhM_A07G0270.1 | AT2G25930 | ELF3, PYK20; ELF3 (EARLY FLOWERING 3); protein C-terminus binding / transcription factor | GO:0009826|unidimensional cell growth;GO:0009585|red, far-red light phototransduction;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0008022|protein C-terminus binding;GO:0009733|response to auxin stimulus;GO:0010031|circumnutation;GO:0009909|regulation of flower development;GO:0003700|transcription factor activity;GO:0009649|entrainment of circadian clock;GO:0007623|circadian rhythm;GO:0048573|photoperiodism, flowering;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA2206:GhM_D07G0405.1,GhM_D07G0406.1;TA3357:GhM_A07G0407.1,GhM_A07G0408.1 | AT4G31800 | WRKY18, ATWRKY18; WRKY18; transcription factor | GO:0005515|protein binding;GO:0050691|regulation of defense response to virus by host;GO:0031347|regulation of defense response;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009751|response to salicylic acid stimulus;GO:0050832|defense response to fungus;GO:0042742|defense response to bacterium | - | 4 | 2 | Gossypium | Cotton | |||
| TA2207:GhM_D07G0518.1,GhM_D07G0519.1;TA3358:GhM_A07G0527.1,GhM_A07G0528.1 | AT3G60580||AT2G28200 | nucleic acid binding / transcription factor/ zinc ion binding||zinc finger (C2H2 type) family protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2209:GhM_D07G0536.1,GhM_D07G0537.1;TA3360:GhM_A07G0545.1,GhM_A07G0546.1 | AT5G07580||AT5G51190 | AP2 domain-containing transcription factor, putative||DNA binding / transcription factor | GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0010200|response to chitin;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2210:GhM_D07G0599.1,GhM_D07G0601.1;TA3362:GhM_A07G0607.1,GhM_A07G0608.1 | AT5G50770 | AtHSD6; AtHSD6 (hydroxysteroid dehydrogenase 6); binding / catalytic/ oxidoreductase | GO:0012505|endomembrane system;GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2217:GhM_D07G0734.1,GhM_D07G0735.1;TA3365:GhM_A07G0744.1,GhM_A07G0745.1 | AT5G44380||AT4G20860 | FAD-binding domain-containing protein | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003824|catalytic activity;GO:0016491|oxidoreductase activity;GO:0005618|cell wall;GO:0050660|FAD binding;GO:0009055|electron carrier activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2222:GhM_D07G0866.1,GhM_D07G0867.1;TA3367:GhM_A07G0864.1,GhM_A07G0865.1 | AT5G16170||AT1G68380 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2223:GhM_D07G0896.1,GhM_D07G0899.1;TA3368:GhM_A07G0894.1,GhM_A07G0895.1 | AT1G66780||AT2G04050 | MATE efflux family protein | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2224:GhM_D07G0907.1,GhM_D07G0908.1;TA3369:GhM_A07G0903.1,GhM_A07G0904.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2225:GhM_D07G0916.1,GhM_D07G0918.1;TA3370:GhM_A07G0914.1,GhM_A07G0915.1 | AT5G17450 | heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related | GO:0046872|metal ion binding;GO:0030001|metal ion transport | - | 4 | 2 | Gossypium | Cotton | |||
| TA2235:GhM_D07G1289.1,GhM_D07G1294.1;TA3379:GhM_A07G1311.1,GhM_A07G1314.1 | AT4G13650||AT2G27610 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2237:GhM_D07G1370.1,GhM_D07G1371.1;TA3380:GhM_A07G1390.1,GhM_A07G1391.1 | AT3G63470 | scpl40; scpl40 (serine carboxypeptidase-like 40); serine-type carboxypeptidase | GO:0006508|proteolysis;GO:0012505|endomembrane system | - | 4 | 2 | Gossypium | Cotton | |||
| TA2244:GhM_D07G1701.1,GhM_D07G1702.1;TA3384:GhM_A07G1730.1,GhM_A07G1731.1 | AT4G23470||AT1G63830 | proline-rich family protein||hydroxyproline-rich glycoprotein family protein | ;GO:0005886|plasma membrane;GO:0016020|membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA2245:GhM_D07G1713.1,GhM_D07G1714.1;TA3385:GhM_A07G1742.1,GhM_A07G1744.1 | AT2G45910 | protein kinase family protein / U-box domain-containing protein | GO:0004672|protein kinase activity;GO:0000151|ubiquitin ligase complex;GO:0006468|protein amino acid phosphorylation;GO:0004842|ubiquitin-protein ligase activity;GO:0016301|kinase activity;GO:0016567|protein ubiquitination;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2261:GhM_D07G2224.1,GhM_D07G2225.1;TA3394:GhM_A07G2291.1,GhM_A07G2292.1 | AT5G15780 | pollen Ole e 1 allergen and extensin family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2264:GhM_D07G2259.1,GhM_D07G2266.1;TA3396:GhM_A07G2327.1,GhM_A07G2328.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2268:GhM_D07G2370.1,GhM_D07G2371.1;TA3401:GhM_A07G2469.1,GhM_A07G2470.1 | AT5G48170 | SLY2; SLY2 (SLEEPY2) | GO:0009937|regulation of gibberellic acid mediated signaling pathway;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2269:GhM_D07G2375.1,GhM_D07G2376.1;TA3402:GhM_A07G2473.1,GhM_A07G2474.1 | AT3G13130||AT2G04515 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2273:GhM_D07G2482.1,GhM_D07G2484.1;TA3409:GhM_A07G2582.1,GhM_A07G2584.1 | AT3G07170 | sterile alpha motif (SAM) domain-containing protein | GO:0008150|biological_process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2286:GhM_D07G2818.1,GhM_D07G2819.1;TA3419:GhM_A07G2918.1,GhM_A07G2919.1 | AT3G26430 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process | - | 4 | 2 | Gossypium | Cotton | |||
| TA2295:GhM_D08G0295.1,GhM_D08G0296.1;TA3429:GhM_A08G0306.1,GhM_A08G0307.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2297:GhM_D08G0488.1,GhM_D08G0490.1;TA3433:GhM_A08G0509.1,GhM_A08G0511.1 | AT2G47330 | DEAD/DEAH box helicase, putative | GO:0008150|biological_process;GO:0005524|ATP binding;GO:0003676|nucleic acid binding;GO:0008026|ATP-dependent helicase activity;GO:0004386|helicase activity;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2301:GhM_D08G0517.1,GhM_D08G0518.1;TA3436:GhM_A08G0551.1,GhM_A08G0552.1 | AT3G62730 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2307:GhM_D08G0825.1,GhM_D08G0826.1;TA3446:GhM_A08G0870.1,GhM_A08G0871.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2311:GhM_D08G0993.1,GhM_D08G0995.1;TA3453:GhM_A08G1035.1,GhM_A08G1037.1 | AT3G13050 | transporter-related | GO:0005351|sugar:hydrogen symporter activity;GO:0006810|transport;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016020|membrane;GO:0005215|transporter activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2317:GhM_D08G1352.1,GhM_D08G1353.1;TA3458:GhM_A08G1496.1,GhM_A08G1499.1 | AT3G49570||AT5G24660 | LSU3; LSU3 (RESPONSE TO LOW SULFUR 3)||LSU2; LSU2 (RESPONSE TO LOW SULFUR 2) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2326:GhM_D08G1925.1,GhM_D08G1928.1;TA3468:GhM_A08G1980.1,GhM_A08G1982.1 | AT4G19420||AT5G45280 | pectinacetylesterase, putative||pectinacetylesterase family protein | GO:0012505|endomembrane system;GO:0004091|carboxylesterase activity;GO:0008150|biological_process;GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA2327:GhM_D08G1973.1,GhM_D08G1975.1;TA3469:GhM_A08G2019.1,GhM_A08G2023.1 | AT1G32100 | ATPRR1, PRR1; PRR1 (PINORESINOL REDUCTASE 1); pinoresinol reductase | GO:0010283|pinoresinol reductase activity;GO:0009807|lignan biosynthetic process;GO:0005575|cellular_component | - | 4 | 2 | Gossypium | Cotton | |||
| TA2332:GhM_D08G2150.1,GhM_D08G2151.1;TA3473:GhM_A08G2193.1,GhM_A08G2194.1 | AT4G16770 | iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | GO:0005506|iron ion binding;GO:0005777|peroxisome;GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2336:GhM_D08G2252.1,GhM_D08G2253.1;TA3477:GhM_A08G2306.1,GhM_A08G2307.1 | AT5G67360||AT1G04110 | SDD1; SDD1 (STOMATAL DENSITY AND DISTRIBUTION); serine-type endopeptidase||ARA12; ARA12; serine-type endopeptidase | GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0009897|external side of plasma membrane;GO:0048046|apoplast;GO:0042127|regulation of cell proliferation;GO:0010214|seed coat development;GO:0005576|extracellular region;GO:0005618|cell wall;GO:0006508|proteolysis;GO:0048359|mucilage metabolic process during seed coat development;GO:0010103|stomatal complex morphogenesis | - | 4 | 2 | Gossypium | Cotton | |||
| TA2345:GhM_D08G2554.1,GhM_D08G2555.1;TA3484:GhM_A08G2614.1,GhM_A08G2615.1 | AT4G11110 | SPA2; SPA2 (SPA1-RELATED 2); protein binding / signal transducer | GO:0005515|protein binding;GO:0005834|heterotrimeric G-protein complex;GO:0004871|signal transducer activity;GO:0006468|protein amino acid phosphorylation | - | 4 | 2 | Gossypium | Cotton | |||
| TA2347:GhM_D08G2660.1,GhM_D08G2661.1;TA3487:GhM_A08G2720.1,GhM_A08G2721.1 | AT3G05200 | ATL6; ATL6; protein binding / zinc ion binding | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0010200|response to chitin | - | 4 | 2 | Gossypium | Cotton | |||
| TA2355:GhM_D08G2891.1,GhM_D08G2892.1;TA3493:GhM_A08G2952.1,GhM_A08G2953.1 | AT5G23530 | AtCXE18; AtCXE18 (Arabidopsis thaliana carboxyesterase 18); carboxylesterase | GO:0009860|pollen tube growth;GO:0004091|carboxylesterase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2358:GhM_D08G3019.1,GhM_D08G3020.1;TA3497:GhM_A08G3089.1,GhM_A08G3090.1 | AT1G15550||AT4G21690 | ATGA3OX3, GA3OX3; GA3OX3 (GIBBERELLIN 3-OXIDASE 3); iron ion binding / oxidoreductase||GA4, ATGA3OX1, GA3OX1; GA3OX1 (GIBBERELLIN 3-OXIDASE 1); gibberellin 3-beta-dioxygenase/ transcription factor binding | GO:0009686|gibberellin biosynthetic process;GO:0016707|gibberellin 3-beta-dioxygenase activity;GO:0009739|response to gibberellin stimulus;GO:0009639|response to red or far red light;GO:0010114|response to red light;GO:0005737|cytoplasm;GO:0009740|gibberellic acid mediated signaling pathway;GO:0005506|iron ion binding;GO:0008134|transcription factor binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2361:GhM_D08G3113.1,GhM_D08G3114.1;TA3503:GhM_A08G3187.1,GhM_A08G3188.1 | AT5G56530||AT5G25950||AT5G25960 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2377:GhM_D09G0562.1,GhM_D09G0564.1;TA3524:GhM_A09G0625.1,GhM_A09G0627.1 | AT1G01580||AT5G23980 | FRO2, FRD1, ATFRO2; FRO2 (FERRIC REDUCTION OXIDASE 2); ferric-chelate reductase||ATFRO4, FRO4; FRO4 (FERRIC REDUCTION OXIDASE 4); ferric-chelate reductase | GO:0055072|iron ion homeostasis;GO:0012505|endomembrane system;GO:0009735|response to cytokinin stimulus;GO:0000293|ferric-chelate reductase activity;GO:0006499|N-terminal protein myristoylation;GO:0009617|response to bacterium;GO:0015688|iron chelate transport;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0016021|integral to membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA2379:GhM_D09G0697.1,GhM_D09G0698.1;TA3528:GhM_A09G0757.1,GhM_A09G0759.1 | AT3G50170||AT4G31980||AT3G50120 | unknown protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2380:GhM_D09G0703.1,GhM_D09G0705.1;TA3529:GhM_A09G0765.1,GhM_A09G0767.1 | AT3G16970||AT3G24060 | self-incompatibility protein-related | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2382:GhM_D09G0746.1,GhM_D09G0747.1;TA3530:GhM_A09G0803.1,GhM_A09G0805.1 | AT4G14930 | acid phosphatase survival protein SurE, putative | GO:0008150|biological_process;GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0003993|acid phosphatase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2387:GhM_D09G0891.1,GhM_D09G0892.1;TA3536:GhM_A09G0953.1,GhM_A09G0954.1 | AT4G21970 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2394:GhM_D09G1080.1,GhM_D09G1081.1;TA3541:GhM_A09G1151.1,GhM_A09G1152.1 | AT3G60280||AT2G02850||AT1G22480 | plastocyanin-like domain-containing protein||ARPN; ARPN (PLANTACYANIN); copper ion binding / electron carrier||UCC3; UCC3 (UCLACYANIN 3); copper ion binding / electron carrier | GO:0031225|anchored to membrane;GO:0005507|copper ion binding;GO:0048046|apoplast;GO:0009055|electron carrier activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2397:GhM_D09G1235.1,GhM_D09G1236.1;TA3546:GhM_A09G1305.1,GhM_A09G1306.1 | AT1G08440 | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1); malate transmembrane transporter (TAIR:AT1G08430.1); Has 377 Blast hits to 376 proteins in 91 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 4; Plants - 211; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2402:GhM_D09G1347.1,GhM_D09G1348.1;TA3553:GhM_A09G1436.1,GhM_A09G1437.1 | - | - | - | - | 4 | 2 | Gossypium | Cotton | |||
| TA2405:GhM_D09G1440.1,GhM_D09G1441.1;TA3555:GhM_A09G1538.1,GhM_A09G1539.1 | AT3G57240||AT3G57270 | BG3; BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds||BG1; BG1 (BETA-1,3-GLUCANASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0008810|cellulase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0048046|apoplast;GO:0009617|response to bacterium;GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA2406:GhM_D09G1445.1,GhM_D09G1446.1;TA3556:GhM_A09G1544.1,GhM_A09G1545.1 | AT4G20990||AT1G08080||AT4G21000 | ATACA7, ACA7; ACA7 (ALPHA CARBONIC ANHYDRASE 7); carbonate dehydratase/ zinc ion binding||ATACA4, ACA4; ACA4 (ALPHA CARBONIC ANHYDRASE 4); carbonate dehydratase/ zinc ion binding||ATACA6, ACA6; ACA6 (ALPHA CARBONIC ANHYDRASE 6); carbonate dehydratase/ zinc ion binding | GO:0012505|endomembrane system;GO:0004089|carbonate dehydratase activity;GO:0006730|one-carbon metabolic process;GO:0008270|zinc ion binding;GO:0009535|chloroplast thylakoid membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA2415:GhM_D09G1711.1,GhM_D09G1712.1;TA3565:GhM_A09G1819.1,GhM_A09G1820.1 | AT2G39210 | nodulin family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 4 | 2 | Gossypium | Cotton | |||
| TA2420:GhM_D09G1870.1,GhM_D09G1871.1;TA3569:GhM_A09G1972.1,GhM_A09G1973.1 | AT2G37430 | zinc finger (C2H2 type) family protein (ZAT11) | GO:0045449|regulation of transcription;GO:0010200|response to chitin;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2423:GhM_D09G2069.1,GhM_D09G2070.1;TA3571:GhM_A09G2154.1,GhM_A09G2155.1 | AT3G59630||AT5G38260||AT1G67000 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||serine/threonine protein kinase, putative||diphthamide synthesis DPH2 family protein | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0003674|molecular_function;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0004674|protein serine/threonine kinase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2429:GhM_D09G2325.1,GhM_D09G2326.1;TA3576:GhM_A09G2441.1,GhM_A09G2442.1 | AT3G23610 | dual specificity protein phosphatase (DsPTP1) | GO:0006470|protein amino acid dephosphorylation;GO:0008138|protein tyrosine/serine/threonine phosphatase activity;GO:0005516|calmodulin binding | - | 4 | 2 | Gossypium | Cotton | |||
| TA2430:GhM_D09G2332.1,GhM_D09G2334.1;TA3577:GhM_A09G2447.1,GhM_A09G2448.1 | AT3G23880||AT4G12560 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0031348|negative regulation of defense response | - | 4 | 2 | Gossypium | Cotton | |||
| TA2431:GhM_D09G2388.1,GhM_D09G2392.1;TA3579:GhM_A09G2505.1,GhM_A09G2509.1 | AT3G57030 | strictosidine synthase family protein | GO:0009505|plant-type cell wall;GO:0009821|alkaloid biosynthetic process;GO:0009058|biosynthetic process;GO:0016844|strictosidine synthase activity;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum | - | 4 | 2 | Gossypium | Cotton | |||
| TA2435:GhM_D09G2492.1,GhM_D09G2493.1;TA3583:GhM_A09G2610.1,GhM_A09G2611.1 | AT5G59320||AT3G08770||AT3G51600 | LTP5; LTP5 (Lipid transfer protein 5); lipid transporter||LTP3; LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding||LTP6; LTP6; lipid binding | GO:0012505|endomembrane system;GO:0009737|response to abscisic acid stimulus;GO:0009414|response to water deprivation;GO:0048046|apoplast;GO:0008289|lipid binding;GO:0006869|lipid transport;GO:0005618|cell wall | - | 4 | 2 | Gossypium | Cotton | |||
| TA2437:GhM_D09G2569.1,GhM_D09G2570.1;TA3588:GhM_A09G2691.1,GhM_A09G2692.1 | AT3G22840 | ELIP1, ELIP; ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding | GO:0016168|chlorophyll binding;GO:0009409|response to cold | - | 4 | 2 | Gossypium | Cotton | |||
| TA2439:GhM_D09G2645.1,GhM_D09G2648.1;TA3590:GhM_A09G2772.1,GhM_A09G2773.1 | AT5G18330||AT5G18320 | armadillo/beta-catenin repeat family protein / U-box domain-containing protein||U-box domain-containing protein | GO:0005488|binding;GO:0016567|protein ubiquitination;GO:0000151|ubiquitin ligase complex;GO:0004842|ubiquitin-protein ligase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA2441:GhM_D09G2828.1,GhM_D09G2829.1;TA3591:GhM_A09G2969.1,GhM_A09G2970.1 | AT5G60880 | unknown protein | GO:0009826|unidimensional cell growth;GO:0010374|stomatal complex development;GO:0005634|nucleus;GO:0009786|regulation of asymmetric cell division;GO:0019897|extrinsic to plasma membrane | - | 4 | 2 | Gossypium | Cotton | |||
| TA2811:GhM_D13G1307.1,GhM_D13G1310.1;TA3595:GhM_Scaf051G199.1,GhM_Scaf051G204.1 | AT5G44750 | REV1, ATREV1; REV1; DNA-directed DNA polymerase | GO:0006974|response to DNA damage stimulus;GO:0010224|response to UV-B;GO:0009507|chloroplast;GO:0006281|DNA repair;GO:0005622|intracellular;GO:0003887|DNA-directed DNA polymerase activity | - | 4 | 2 | Gossypium | Cotton | |||
| TA1056:GhM_A06G0600.1,GhM_A06G0603.1,GhM_A06G0604.1 | AT1G17020 | SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0010260|organ senescence;GO:0009813|flavonoid biosynthetic process;GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005575|cellular_component | - | 3 | 1 | Gossypium | Cotton | |||
| TA1072:GhM_A07G0960.1,GhM_A07G0962.1,GhM_A07G0965.1 | AT3G51550||AT1G30570 | FER; FER (FERONIA); kinase/ protein kinase||protein kinase family protein | GO:0009826|unidimensional cell growth;GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0010483|pollen tube reception;GO:0009741|response to brassinosteroid stimulus;GO:0009791|post-embryonic development;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0043680|filiform apparatus | - | 3 | 1 | Gossypium | Cotton | |||
| TA1139:GhM_A10G0442.1,GhM_A10G0447.1 | - | - | - | GhM_D08G2721.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1143:GhM_A10G0507.1,GhM_A10G0510.1 | AT4G19690||AT1G31260 | ZIP10; ZIP10 (ZINC TRANSPORTER 10 PRECURSOR); cation transmembrane transporter/ metal ion transmembrane transporter||IRT1; IRT1 (iron-regulated transporter 1); cadmium ion transmembrane transporter/ copper uptake transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter | GO:0012505|endomembrane system;GO:0006812|cation transport;GO:0046873|metal ion transmembrane transporter activity;GO:0016020|membrane;GO:0016021|integral to membrane;GO:0008324|cation transmembrane transporter activity | GhM_D13G0068.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1144:GhM_A10G0508.1,GhM_A10G0511.1 | AT3G05320 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G1851.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1164:GhM_A10G1254.1,GhM_A10G1255.1 | AT4G13810 | AtRLP47; AtRLP47 (Receptor Like Protein 47); protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0006952|defense response | GhM_D10G1839.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1178:GhM_A10G1732.1,GhM_A10G1733.1 | - | - | - | GhM_D10G1395.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1181:GhM_A10G1788.1,GhM_A10G1789.1 | - | - | - | GhM_D10G1350.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1183:GhM_A10G1866.1,GhM_A10G1868.1 | AT2G38540 | LP1, LTP1, ATLTP1; LP1; calmodulin binding | GO:0006869|lipid transport;GO:0009505|plant-type cell wall;GO:0005516|calmodulin binding;GO:0048046|apoplast | GhM_D10G1274.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1184:GhM_A10G1899.1,GhM_A10G1905.1 | AT3G08610 | unknown protein | GO:0008150|biological_process;GO:0005747|mitochondrial respiratory chain complex I;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0045271|respiratory chain complex I | GhM_D10G1245.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1187:GhM_A10G2048.1,GhM_A10G2049.1 | AT3G13440 | methyltransferase/ nucleic acid binding | GO:0015946|methanol oxidation;GO:0019415|acetate biosynthetic process from carbon monoxide;GO:0008168|methyltransferase activity;GO:0003676|nucleic acid binding;GO:0005575|cellular_component;GO:0032259|methylation | GhM_D10G1988.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1190:GhM_A10G2163.1,GhM_A10G2169.1 | AT3G17040 | HCF107; HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding | GO:0009941|chloroplast envelope;GO:0006417|regulation of translation;GO:0009507|chloroplast;GO:0005488|binding;GO:0009657|plastid organization;GO:0006396|RNA processing;GO:0005886|plasma membrane | GhM_D10G2095.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1196:GhM_A10G2352.1,GhM_A10G2353.1 | AT3G61680 | lipase class 3 family protein | GO:0004806|triglyceride lipase activity;GO:0009507|chloroplast;GO:0006629|lipid metabolic process | GhM_D10G2272.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1199:GhM_A10G2459.1,GhM_A10G2460.1 | AT5G05920 | DHS, EDA22; DHS (DEOXYHYPUSINE SYNTHASE) | GO:0005575|cellular_component;GO:0009553|embryo sac development;GO:0008612|peptidyl-lysine modification to hypusine | GhM_D10G2385.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1202:GhM_A10G2539.1,GhM_A10G2542.1 | AT4G24350 | phosphorylase family protein | GO:0009505|plant-type cell wall;GO:0009611|response to wounding;GO:0003824|catalytic activity;GO:0045735|nutrient reservoir activity | GhM_D10G2456.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1203:GhM_A10G2540.1,GhM_A10G2543.1 | - | - | - | GhM_D10G2457.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1208:GhM_A10G2643.1,GhM_A10G2649.1 | AT2G19660||AT4G02190 | DC1 domain-containing protein | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D10G2557.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1232:GhM_A11G0555.1,GhM_A11G0556.1 | AT3G50440 | ATMES10, MES10; MES10 (METHYL ESTERASE 10); hydrolase/ hydrolase, acting on ester bonds / methyl jasmonate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0016787|hydrolase activity | GhM_D11G0547.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1250:GhM_A11G1183.1,GhM_A11G1188.1 | AT3G61950 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_D11G1191.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1262:GhM_A11G1487.1,GhM_A11G1490.1 | - | - | - | GhM_D11G1477.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1268:GhM_A11G1936.1,GhM_A11G1937.1 | AT1G66840 | INVOLVED IN: biological_process unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: PMI15 (plastid movement impaired 15) (TAIR:AT5G38150.1); Has 66436 Blast hits to 37670 proteins in 1596 species: Archae - 890; Bacteria - 7464; Metazoa - 33216; Fungi - 4897; Plants - 2570; Viruses - 192; Other Eukaryotes - 17207 (source: NCBI BLink). | GO:0008150|biological_process | GhM_D11G1921.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1272:GhM_A11G2099.1,GhM_A11G2100.1 | AT3G51000 | epoxide hydrolase, putative | GO:0003824|catalytic activity;GO:0004301|epoxide hydrolase activity | GhM_D11G2077.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1280:GhM_A11G2611.1,GhM_A11G2612.1 | AT4G37370 | CYP81D8; CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0005506|iron ion binding;GO:0005886|plasma membrane;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D11G2290.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1282:GhM_A11G2626.1,GhM_A11G2631.1 | AT5G67290 | FAD-dependent oxidoreductase family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D11G2279.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1285:GhM_A11G2710.1,GhM_A11G2712.1 | AT5G64630 | FAS2, NFB01, NFB1, MUB3.9; FAS2 (FASCIATA 2); nucleotide binding / protein binding | GO:0005678|chromatin assembly complex;GO:0005515|protein binding;GO:0009933|meristem structural organization;GO:0006334|nucleosome assembly;GO:0008283|cell proliferation;GO:0009555|pollen development;GO:0000166|nucleotide binding;GO:0048366|leaf development;GO:0031507|heterochromatin formation;GO:0010026|trichome differentiation;GO:0006310|DNA recombination;GO:0000724|double-strand break repair via homologous recombination | GhM_D11G2688.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1286:GhM_A11G2715.1,GhM_A11G2716.1 | AT1G08220 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 100 Blast hits to 100 proteins in 48 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 63; Plants - 15; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | GO:0033615|mitochondrial proton-transporting ATP synthase complex assembly;GO:0005743|mitochondrial inner membrane;GO:0003674|molecular_function | GhM_A05G3965.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1302:GhM_A11G3126.1,GhM_A11G3127.1 | - | - | - | GhM_D11G3063.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1316:GhM_A11G3420.1,GhM_A11G3421.1 | AT2G47430 | CKI1; CKI1 (CYTOKININ-INDEPENDENT 1); protein histidine kinase/ two-component response regulator | GO:0004673|protein histidine kinase activity;GO:0009736|cytokinin mediated signaling pathway;GO:0016020|membrane;GO:0000156|two-component response regulator activity | GhM_D11G3333.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1317:GhM_A11G3474.1,GhM_A11G3475.1 | - | - | - | GhM_D11G3387.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1321:GhM_A11G3536.1,GhM_A11G3540.1 | - | - | - | GhM_D11G3457.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1339:GhM_A11G3966.1,GhM_A11G3967.1 | AT5G48670 | FEM111, AGL80; AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent | GhM_D11G3871.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1340:GhM_A11G3997.1,GhM_A11G3998.1 | AT3G11600 | unknown protein | GO:0003674|molecular_function | GhM_D11G3895.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1344:GhM_A11G4077.1,GhM_A11G4079.1 | AT5G54630||AT4G27240 | zinc finger protein-related||zinc finger (C2H2 type) family protein | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding | GhM_D11G3974.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1346:GhM_A11G4086.1,GhM_A11G4087.1 | AT3G09520 | ATEXO70H4; ATEXO70H4 (exocyst subunit EXO70 family protein H4); protein binding | GO:0005515|protein binding;GO:0006904|vesicle docking during exocytosis;GO:0000145|exocyst;GO:0006887|exocytosis | GhM_D11G3982.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1357:GhM_A12G0282.1,GhM_A12G0283.1 | AT3G50440||AT2G23610 | ATMES10, MES10; MES10 (METHYL ESTERASE 10); hydrolase/ hydrolase, acting on ester bonds / methyl jasmonate esterase||ATMES3, MES3; MES3 (METHYL ESTERASE 3); hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0016787|hydrolase activity;GO:0005575|cellular_component | GhM_D12G0288.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1376:GhM_A12G0894.1,GhM_A12G0895.1 | - | - | - | GhM_A09G1058.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1377:GhM_A12G0916.1,GhM_A12G0918.1 | AT4G37310||AT4G37360 | CYP81D2; CYP81D2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81H1; CYP81H1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D12G1065.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1396:GhM_A12G1535.1,GhM_A12G1538.1 | AT5G54160 | ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0005634|nucleus;GO:0005737|cytoplasm;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0009809|lignin biosynthetic process;GO:0051555|flavonol biosynthetic process;GO:0005829|cytosol;GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0005886|plasma membrane;GO:0047763|caffeate O-methyltransferase activity | GhM_D12G1483.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1397:GhM_A12G1564.1,GhM_A12G1565.1 | AT4G01730 | zinc ion binding | GO:0008150|biological_process;GO:0008270|zinc ion binding | GhM_D12G1515.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1405:GhM_A12G1790.1,GhM_A12G1792.1 | AT4G23660 | AtPPT1; AtPPT1 (Arabidopsis thaliana polyprenyltransferase 1); 4-hydroxybenzoate nonaprenyltransferase | GO:0006744|ubiquinone biosynthetic process;GO:0047293|4-hydroxybenzoate nonaprenyltransferase activity;GO:0016021|integral to membrane;GO:0009790|embryonic development | GhM_D12G1735.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1413:GhM_A12G2240.1,GhM_A12G2243.1 | AT3G47780 | ATATH6, ATH6; ATATH6; ATPase, coupled to transmembrane movement of substances / transporter | GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | GhM_D12G2144.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1414:GhM_A12G2242.1,GhM_A12G2244.1 | AT1G26930||AT1G74510 | kelch repeat-containing F-box family protein | GO:0008150|biological_process;GO:0005777|peroxisome;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D07G0843.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1427:GhM_A12G2548.1,GhM_A12G2550.1 | AT4G19220 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D12G2434.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1452:GhM_A13G0064.1,GhM_A13G0065.1 | AT2G45180||AT4G12550 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein||AIR1; AIR1; lipid binding | GO:0012505|endomembrane system;GO:0009733|response to auxin stimulus;GO:0010102|lateral root morphogenesis;GO:0006869|lipid transport;GO:0008289|lipid binding;GO:0009535|chloroplast thylakoid membrane | GhM_D13G0069.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1454:GhM_A13G0090.1,GhM_A13G0091.1 | AT5G58320 | kinase interacting protein-related | GO:0008150|biological_process | GhM_D13G0099.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1458:GhM_A13G0168.1,GhM_A13G0174.1 | - | - | - | GhM_D13G0161.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1461:GhM_A13G0321.1,GhM_A13G0322.1 | AT4G30380 | EXLB2; EXLB2 (EXPANSIN-LIKE B2 PRECURSOR) | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D13G0307.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1510:GhM_A13G2005.1,GhM_A13G2006.1 | AT1G78850||AT1G78860 | curculin-like (mannose-binding) lectin family protein | GO:0009505|plant-type cell wall;GO:0005529|sugar binding;GO:0048046|apoplast;GO:0005618|cell wall;GO:0005886|plasma membrane | GhM_D13G1905.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1512:GhM_A13G2024.1,GhM_A13G2025.1 | AT1G78630 | emb1473; emb1473 (embryo defective 1473); structural constituent of ribosome | GO:0009507|chloroplast;GO:0009793|embryonic development ending in seed dormancy;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0005840|ribosome;GO:0003735|structural constituent of ribosome;GO:0006412|translation | GhM_D13G1920.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1516:GhM_A13G2096.1,GhM_A13G2097.1 | AT3G50150||AT3G50130 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005739|mitochondrion | GhM_D13G1986.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1518:GhM_A13G2118.1,GhM_A13G2122.1 | AT1G13810 | DNA binding / nuclease | GO:0008150|biological_process;GO:0003677|DNA binding;GO:0004518|nuclease activity;GO:0005575|cellular_component | GhM_D13G2010.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1519:GhM_A13G2139.1,GhM_A13G2140.1 | AT3G03570 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP013022 (InterPro:IPR016607); BEST Arabidopsis thaliana protein match is: signal transducer (TAIR:AT4G40050.1); Has 153 Blast hits to 150 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005829|cytosol;GO:0003674|molecular_function | GhM_D13G2025.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1537:GhM_A13G2646.1,GhM_A13G2647.1 | AT1G58190||AT1G74180 | AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding||AtRLP14; AtRLP14 (Receptor Like Protein 14); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0009507|chloroplast | GhM_D13G2550.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1596:GhM_D01G1497.1,GhM_D01G1499.1 | AT3G57520 | AtSIP2; AtSIP2 (Arabidopsis thaliana seed imbibition 2); hydrolase, hydrolyzing O-glycosyl compounds | GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005575|cellular_component | GhM_A01G1480.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1602:GhM_D01G1745.1,GhM_D01G1749.1 | AT1G14540 | anionic peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0009055|electron carrier activity | GhM_A01G1759.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1627:GhM_D01G2708.1,GhM_D01G2709.1 | AT5G48380 | leucine-rich repeat family protein / protein kinase family protein | GO:0005886|plasma membrane;GO:0005515|protein binding;GO:0031348|negative regulation of defense response;GO:0004672|protein kinase activity | GhM_A01G2784.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1637:GhM_D02G0079.1,GhM_D02G0081.1 | - | - | - | GhM_A02G0071.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1641:GhM_D02G0153.1,GhM_D02G0154.1 | AT3G59290||AT2G43160 | epsin N-terminal homology (ENTH) domain-containing protein | GO:0005488|binding;GO:0005886|plasma membrane | GhM_A02G0148.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1648:GhM_D02G0306.1,GhM_D02G0308.1 | - | - | - | GhM_A02G0282.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1663:GhM_D02G0625.1,GhM_D02G0627.1 | AT3G06560 | polynucleotide adenylyltransferase/ protein binding | GO:0005515|protein binding;GO:0031123|RNA 3'-end processing;GO:0005737|cytoplasm;GO:0043631|RNA polyadenylation;GO:0006350|transcription;GO:0004652|polynucleotide adenylyltransferase activity | GhM_A02G0632.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1665:GhM_D02G0747.1,GhM_D02G0750.1 | AT5G45340||AT1G19630 | CYP722A1; CYP722A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP707A3; CYP707A3; (+)-abscisic acid 8'-hydroxylase/ oxygen binding | GO:0012505|endomembrane system;GO:0009639|response to red or far red light;GO:0020037|heme binding;GO:0010295|(+)-abscisic acid 8'-hydroxylase activity;GO:0005506|iron ion binding;GO:0009414|response to water deprivation;GO:0019825|oxygen binding;GO:0046345|abscisic acid catabolic process;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A02G0753.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1667:GhM_D02G0759.1,GhM_D02G0760.1 | AT3G18710 | PUB29, ATPUB29; PUB29 (PLANT U-BOX 29); ubiquitin-protein ligase | GO:0004842|ubiquitin-protein ligase activity;GO:0016567|protein ubiquitination;GO:0000151|ubiquitin ligase complex;GO:0010200|response to chitin | GhM_A02G0762.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1683:GhM_D02G1032.1,GhM_D02G1033.1 | AT4G33280||AT3G06160 | transcriptional factor B3 family protein||DNA binding / transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005773|vacuole;GO:0006355|regulation of transcription, DNA-dependent | GhM_A03G1577.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1693:GhM_D02G1864.1,GhM_D02G1865.1 | AT1G24540 | CYP86C1; CYP86C1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A03G1788.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1694:GhM_D02G1870.1,GhM_D02G1871.1 | AT3G26160||AT3G26170||AT3G26180 | CYP71B20; CYP71B20; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B17; CYP71B17; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B19; CYP71B19; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A03G1793.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1698:GhM_D02G1997.1,GhM_D02G1998.1 | AT5G62610||AT1G59640 | basic helix-loop-helix (bHLH) family protein||ZCW32, BPE, BPEUB; ZCW32; DNA binding / transcription factor | GO:0048446|petal morphogenesis;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A03G1958.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1709:GhM_D02G2553.1,GhM_D02G2555.1 | AT5G56790 | protein kinase family protein | GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding | GhM_A03G2530.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1710:GhM_D02G2554.1,GhM_D02G2556.1 | AT1G10910 | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: PTAC2 (PLASTID TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570 Blast hits to 5782 proteins in 175 species: Archae - 1; Bacteria - 18; Metazoa - 305; Fungi - 261; Plants - 16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI BLink). | GO:0008150|biological_process | GhM_A03G2531.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1715:GhM_D02G2808.1,GhM_D02G2811.1 | AT2G35100 | ARAD1; ARAD1 (ARABINAN DEFICIENT 1); catalytic/ transferase, transferring glycosyl groups | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0045489|pectin biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane | GhM_A03G2802.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1722:GhM_D03G0125.1,GhM_D03G0126.1 | AT5G44230||AT3G49170 | pentatricopeptide (PPR) repeat-containing protein||EMB2261; EMB2261 (embryo defective 2261) | ;GO:0009793|embryonic development ending in seed dormancy;GO:0009507|chloroplast | GhM_A02G2147.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1728:GhM_D03G0215.1,GhM_D03G0218.1 | AT2G26560||AT4G37050 | PLP4, PLA V; PLP4 (PATATIN-LIKE PROTEIN 4); nutrient reservoir||PLP2, PLA IIA, PLA2A; PLA2A (PHOSPHOLIPASE A 2A); lipase/ nutrient reservoir | GO:0051607|defense response to virus;GO:0031408|oxylipin biosynthetic process;GO:0008152|metabolic process;GO:0046686|response to cadmium ion;GO:0005737|cytoplasm;GO:0009626|plant-type hypersensitive response;GO:0006629|lipid metabolic process;GO:0045735|nutrient reservoir activity;GO:0008219|cell death;GO:0005575|cellular_component;GO:0016020|membrane;GO:0016298|lipase activity | GhM_A02G2046.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1742:GhM_D03G0548.1,GhM_D03G0550.1 | AT3G03470||AT1G64900||AT1G64950 | CYP89A5; CYP89A5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP89A9; CYP89A9; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP89A2, CYP89; CYP89A2 (CYTOCHROME P450 89A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005783|endoplasmic reticulum;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A02G1819.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1745:GhM_D03G0706.1,GhM_D03G0709.1 | AT4G25980 | cationic peroxidase, putative | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress | GhM_A02G1657.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1765:GhM_D03G1439.1,GhM_D03G1440.1 | AT5G58880||AT2G29620 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0666.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1766:GhM_D03G1471.1,GhM_D03G1472.1 | AT3G53990 | universal stress protein (USP) family protein | GO:0006950|response to stress;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A03G0642.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1767:GhM_D03G1474.1,GhM_D03G1475.1 | AT5G59070 | glycosyl transferase family 1 protein | GO:0012505|endomembrane system;GO:0009058|biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups | GhM_A03G0640.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1771:GhM_D03G1558.1,GhM_D03G1563.1 | AT2G28800 | ALB3, ABL3; ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | GO:0009507|chloroplast;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0010027|thylakoid membrane organization;GO:0045038|protein import into chloroplast thylakoid membrane;GO:0009535|chloroplast thylakoid membrane | GhM_A03G0569.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1787:GhM_D03G1946.1,GhM_D03G1959.1 | - | - | - | GhM_A03G0144.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1790:GhM_D03G1979.1,GhM_D03G1981.1 | AT2G35660 | CTF2A; CTF2A; monooxygenase/ oxidoreductase | GO:0008152|metabolic process;GO:0004497|monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_A03G0126.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1791:GhM_D03G2022.1,GhM_D03G2023.1 | AT4G35470||AT2G17440 | leucine-rich repeat family protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0005515|protein binding | GhM_A03G0079.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1797:GhM_D04G0172.1,GhM_D04G0178.1 | AT3G54480 | SKIP5, SKP5; SKIP5 (SKP1/ASK-INTERACTING PROTEIN 5) | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A05G4770.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1802:GhM_D04G0301.1,GhM_D04G0305.1 | AT2G26790 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005739|mitochondrion | GhM_A05G4640.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1823:GhM_D04G1204.1,GhM_D04G1205.1 | AT2G07698||ATMG01190 | ATP synthase alpha chain, mitochondrial, putative||ATP1; ATPase subunit 1 | GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0046933|hydrogen ion transporting ATP synthase activity, rotational mechanism;GO:0008266|poly(U) RNA binding;GO:0015986|ATP synthesis coupled proton transport;GO:0005739|mitochondrion;GO:0005730|nucleolus;GO:0046034|ATP metabolic process;GO:0015992|proton transport;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0008270|zinc ion binding;GO:0005773|vacuole | GhM_D06G0650.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1841:GhM_D04G1869.1,GhM_D04G1870.1 | AT4G16740 | ATTPS03; ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase | GO:0016099|monoterpenoid biosynthetic process;GO:0050551|myrcene synthase activity;GO:0009611|response to wounding | GhM_A04G1380.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1848:GhM_D04G2055.1,GhM_D04G2056.1 | AT4G33960 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A04G1579.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1865:GhM_D04G2347.1,GhM_D04G2350.1 | AT1G66920||AT1G66930 | serine/threonine protein kinase, putative||serine/threonine protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A04G1878.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1869:GhM_D05G0135.1,GhM_D05G0137.1 | AT1G30910 | molybdenum cofactor sulfurase family protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0008265|Mo-molybdopterin cofactor sulfurase activity;GO:0030151|molybdenum ion binding | GhM_A05G0128.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1870:GhM_D05G0136.1,GhM_D05G0138.1 | AT4G20130 | PTAC14; PTAC14 (PLASTID TRANSCRIPTIONALLY ACTIVE14) | GO:0009507|chloroplast;GO:0009295|nucleoid | GhM_A05G0129.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1882:GhM_D05G0541.1,GhM_D05G0542.1 | AT3G63520||AT1G78390 | NCED9, ATNCED9; NCED9 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9); 9-cis-epoxycarotenoid dioxygenase||CCD1, ATCCD1, ATNCED1, NCED1; CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase | GO:0009688|abscisic acid biosynthetic process;GO:0016121|carotene catabolic process;GO:0016118|carotenoid catabolic process;GO:0005737|cytoplasm;GO:0009570|chloroplast stroma;GO:0045549|9-cis-epoxycarotenoid dioxygenase activity;GO:0009414|response to water deprivation;GO:0005886|plasma membrane;GO:0016124|xanthophyll catabolic process;GO:0005773|vacuole | GhM_A05G0519.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1886:GhM_D05G0608.1,GhM_D05G0610.1 | AT4G08850||AT1G66830 | leucine-rich repeat transmembrane protein kinase, putative||kinase | GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G0607.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1896:GhM_D05G0969.1,GhM_D05G0971.1 | - | - | - | GhM_A05G0957.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1899:GhM_D05G1179.1,GhM_D05G1180.1 | - | - | - | GhM_A05G1161.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1913:GhM_D05G1611.1,GhM_D05G1612.1 | AT3G14250 | protein binding / zinc ion binding | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A05G1597.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1921:GhM_D05G1892.1,GhM_D05G1893.1 | AT4G27290||AT1G11410 | S-locus protein kinase, putative||ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0016301|kinase activity;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G1882.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1922:GhM_D05G1918.1,GhM_D05G1920.1 | - | - | - | GhM_A05G1906.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1923:GhM_D05G1948.1,GhM_D05G1949.1 | AT1G11925 | Encodes a Stigma-specific Stig1 family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A05G1937.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1939:GhM_D05G2590.1,GhM_D05G2591.1 | - | - | - | GhM_A05G2577.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1940:GhM_D05G2646.1,GhM_D05G2656.1 | AT1G18780||AT1G18770 | zinc finger (C3HC4-type RING finger) family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_A05G2632.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1948:GhM_D05G2900.1,GhM_D05G2901.1 | - | - | - | GhM_A05G2892.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1955:GhM_D05G3094.1,GhM_D05G3095.1 | - | - | - | GhM_A05G3095.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1967:GhM_D05G3350.1,GhM_D05G3352.1 | AT3G09780||AT2G39180 | CCR1, ATCRR1; CCR1 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ receptor||CCR2, ATCRR2; CCR2 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ receptor | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0004872|receptor activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A05G3378.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1977:GhM_D05G3858.1,GhM_D05G3859.1 | AT4G21580 | oxidoreductase, zinc-binding dehydrogenase family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity | GhM_A04G0524.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1988:GhM_D05G4087.1,GhM_D05G4091.1 | AT2G04050||AT1G71140||AT2G04080 | MATE efflux family protein | GO:0015297|antiporter activity;GO:0006855|drug transmembrane transport;GO:0015238|drug transmembrane transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005215|transporter activity | GhM_A04G0296.1 | 3 | 1 | Gossypium | Cotton | |||
| TA1998:GhM_D05G4379.1,GhM_D05G4381.1 | AT3G13229||AT4G12690 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A04G0042.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2009:GhM_D06G0184.1,GhM_D06G0185.1 | - | - | - | GhM_D02G1008.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2020:GhM_D06G0446.1,GhM_D06G0448.1 | - | - | - | GhM_D06G0447.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2043:GhM_D06G1423.1,GhM_D06G1425.1 | AT4G09750 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0008152|metabolic process;GO:0003824|catalytic activity;GO:0005488|binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_A06G1418.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2073:GhM_D06G2251.1,GhM_D06G2275.1 | AT5G04940 | SUVH1; SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase | GO:0040029|regulation of gene expression, epigenetic;GO:0005634|nucleus;GO:0042054|histone methyltransferase activity | GhM_A06G2281.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2076:GhM_D06G2287.1,GhM_D06G2290.1 | - | - | - | GhM_A06G2293.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2077:GhM_D06G2303.1,GhM_D06G2306.1 | - | - | - | GhM_A06G2302.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2089:GhM_D06G2601.1,GhM_D06G2602.1 | AT4G05220 | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A06G2610.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2100:GhM_A01G0241.1,GhM_A01G0242.1 | AT3G43740||AT5G21090 | leucine-rich repeat family protein||leucine-rich repeat protein, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0007165|signal transduction | GhM_D01G0214.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2113:GhM_A01G0494.1,GhM_A01G0495.1 | AT1G78710||AT3G14850 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | GhM_D01G0481.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2123:GhM_A01G0735.1,GhM_A01G0736.1 | AT4G10265||AT4G10270 | wound-responsive family protein||wound-responsive protein, putative | GO:0009611|response to wounding;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D01G0703.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2160:GhM_A01G1786.1,GhM_A01G1789.1 | AT2G01590 | CRR3; CRR3 (CHLORORESPIRATORY REDUCTION 3) | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone);GO:0009773|photosynthetic electron transport in photosystem I;GO:0016020|membrane | GhM_D01G1822.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2164:GhM_A01G1863.1,GhM_A01G1864.1 | AT1G70830 | MLP28; MLP28 (MLP-LIKE PROTEIN 28) | GO:0006952|defense response;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0009607|response to biotic stimulus | GhM_D01G1835.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2166:GhM_A01G1942.1,GhM_A01G1943.1 | AT1G24460 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D01G1979.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2176:GhM_A01G2175.1,GhM_A01G2180.1 | AT2G30920 | ATCOQ3, EMB3002, COQ3; ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3); hexaprenyldihydroxybenzoate methyltransferase/ polyprenyldihydroxybenzoate methyltransferase | GO:0006744|ubiquinone biosynthetic process;GO:0004395|hexaprenyldihydroxybenzoate methyltransferase activity;GO:0005740|mitochondrial envelope;GO:0009793|embryonic development ending in seed dormancy;GO:0010420|polyprenyldihydroxybenzoate methyltransferase activity | GhM_D01G2141.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2180:GhM_A01G2281.1,GhM_A01G2284.1 | AT3G26600 | ARO4; ARO4 (ARMADILLO REPEAT ONLY 4); binding | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | GhM_D01G2238.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2181:GhM_A01G2285.1,GhM_A01G2286.1 | - | - | - | GhM_D01G2239.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2208:GhM_D07G0531.1,GhM_D07G0533.1 | AT5G07610 | F-box family protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A07G0541.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2213:GhM_D07G0661.1,GhM_D07G0662.1 | AT5G61640 | PMSR1, ATMSRA1; PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | GO:0006979|response to oxidative stress;GO:0005829|cytosol;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;GO:0006464|protein modification process;GO:0008113|peptide-methionine-(S)-S-oxide reductase activity | GhM_A07G0670.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2215:GhM_D07G0687.1,GhM_D07G0688.1 | AT4G28050||AT2G23810 | TET8; TET8 (TETRASPANIN8)||TET7; TET7 (TETRASPANIN7) | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0016021|integral to membrane;GO:0016020|membrane;GO:0007568|aging | GhM_A07G0694.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2219:GhM_D07G0778.1,GhM_D07G0780.1 | AT1G74720 | C2 domain-containing protein | GO:0005886|plasma membrane;GO:0048513|organ development;GO:0003674|molecular_function | GhM_A07G0783.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2221:GhM_D07G0857.1,GhM_D07G0858.1 | - | - | - | GhM_A07G0857.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2228:GhM_D07G0958.1,GhM_D07G0959.1 | - | - | - | GhM_A07G0968.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2229:GhM_D07G0960.1,GhM_D07G0961.1 | - | - | - | GhM_A07G0970.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2239:GhM_D07G1478.1,GhM_D07G1479.1 | AT2G27315 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_A07G1505.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2249:GhM_D07G1973.1,GhM_D07G1974.1 | AT4G35160 | O-methyltransferase family 2 protein | GO:0008168|methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0005829|cytosol;GO:0046983|protein dimerization activity | GhM_A07G2026.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2250:GhM_D07G1979.1,GhM_D07G1980.1 | AT5G58390||AT5G05340 | peroxidase, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0004601|peroxidase activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0009055|electron carrier activity | GhM_D09G2484.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2252:GhM_D07G2014.1,GhM_D07G2018.1 | AT5G48910 | pentatricopeptide (PPR) repeat-containing protein | GO:0009507|chloroplast;GO:0009451|RNA modification | GhM_A07G2218.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2254:GhM_D07G2051.1,GhM_D07G2052.1 | AT2G44310 | calcium-binding EF hand family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0005509|calcium ion binding | GhM_A07G2200.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2255:GhM_D07G2057.1,GhM_D07G2059.1 | AT5G14180 | MPL1; MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1); catalytic | GO:0012505|endomembrane system;GO:0006114|glycerol biosynthetic process;GO:0003824|catalytic activity;GO:0006629|lipid metabolic process | GhM_A07G2079.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2260:GhM_D07G2178.1,GhM_D07G2179.1 | - | - | - | GhM_A07G2249.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2262:GhM_D07G2252.1,GhM_D07G2255.1 | - | - | - | GhM_A07G2322.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2270:GhM_D07G2410.1,GhM_D07G2411.1 | - | - | - | GhM_A07G2513.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2275:GhM_D07G2542.1,GhM_D07G2543.1 | AT1G04020 | ATBARD1, BARD1; BARD1 (BREAST CANCER ASSOCIATED RING 1); DNA binding / transcription coactivator | GO:0006281|DNA repair;GO:0009934|regulation of meristem structural organization;GO:0003713|transcription coactivator activity;GO:0003677|DNA binding;GO:0005622|intracellular;GO:0048366|leaf development | GhM_A07G2644.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2283:GhM_D07G2716.1,GhM_D07G2717.1 | - | - | - | GhM_A07G2809.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2302:GhM_D08G0574.1,GhM_D08G0575.1 | AT3G55252||AT5G12060 | self-incompatibility protein-related||LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55254.1); Has 81 Blast hits to 78 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system | GhM_A08G0605.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2303:GhM_D08G0601.1,GhM_D08G0602.1 | AT2G31100 | triacylglycerol lipase | GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | GhM_A08G0634.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2314:GhM_D08G1050.1,GhM_D08G1051.1 | AT4G25770 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast | GhM_A08G1182.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2316:GhM_D08G1128.1,GhM_D08G1129.1 | AT4G35165||AT2G27315||AT5G54062 | unknown protein | GO:0008150|biological_process;GO:0016020|membrane;GO:0003674|molecular_function | GhM_D13G0235.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2318:GhM_D08G1433.1,GhM_D08G1434.1 | - | - | - | GhM_A13G1638.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2337:GhM_D08G2278.1,GhM_D08G2279.1 | AT3G19690 | pathogenesis-related protein, putative | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005576|extracellular region;GO:0003674|molecular_function | GhM_A08G2336.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2348:GhM_D08G2664.1,GhM_D08G2665.1 | AT1G49360 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A08G2724.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2349:GhM_D08G2746.1,GhM_D08G2749.1 | - | - | - | GhM_A08G2801.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2352:GhM_D08G2810.1,GhM_D08G2814.1 | - | - | - | GhM_A08G2869.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2368:GhM_D09G0248.1,GhM_D09G0249.1 | AT1G59710||AT3G28630||AT1G27100 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G59710.1); Has 121 Blast hits to 110 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69900.1); Has 184 Blast hits to 118 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27100.1); Has 119 Blast hits to 107 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 119; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0005773|vacuole | GhM_A09G0271.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2371:GhM_D09G0278.1,GhM_D09G0280.1 | AT5G40010 | AATP1; AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0000166|nucleotide binding;GO:0017111|nucleoside-triphosphatase activity;GO:0005524|ATP binding;GO:0016887|ATPase activity | GhM_A09G0309.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2375:GhM_D09G0516.1,GhM_D09G0518.1 | AT3G61150 | HDG1, HD-GL2-1; HDG1 (HOMEODOMAIN GLABROUS 1); DNA binding / transcription factor | GO:0005634|nucleus;GO:0045449|regulation of transcription;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A09G0562.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2378:GhM_D09G0586.1,GhM_D09G0587.1 | AT1G68530 | CUT1, POP1, CER6, G2, KCS6; KCS6 (3-KETOACYL-COA SYNTHASE 6); catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0009826|unidimensional cell growth;GO:0003824|catalytic activity;GO:0000038|very-long-chain fatty acid metabolic process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0009416|response to light stimulus;GO:0010025|wax biosynthetic process;GO:0042335|cuticle development;GO:0005783|endoplasmic reticulum;GO:0009409|response to cold | GhM_A09G0633.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2381:GhM_D09G0744.1,GhM_D09G0745.1 | AT5G26250 | sugar transporter, putative | GO:0012505|endomembrane system;GO:0055085|transmembrane transport;GO:0016021|integral to membrane;GO:0006810|transport | GhM_A09G0802.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2384:GhM_D09G0780.1,GhM_D09G0782.1 | - | - | - | GhM_A09G0839.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2390:GhM_D09G0991.1,GhM_D09G0993.1 | - | - | - | GhM_A09G1056.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2392:GhM_D09G1051.1,GhM_D09G1052.1 | - | - | - | GhM_A09G1124.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2410:GhM_D09G1556.1,GhM_D09G1559.1 | AT3G58470 | methyltransferase/ nucleic acid binding | GO:0008168|methyltransferase activity;GO:0003676|nucleic acid binding;GO:0005575|cellular_component;GO:0032259|methylation | GhM_A09G1659.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2417:GhM_D09G1807.1,GhM_D09G1808.1 | AT1G34300 | lectin protein kinase family protein | GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_A09G1910.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2427:GhM_D09G2232.1,GhM_D09G2233.1 | AT4G11440 | binding | GO:0006810|transport;GO:0005488|binding;GO:0006839|mitochondrial transport;GO:0016020|membrane;GO:0005743|mitochondrial inner membrane | GhM_A09G2333.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2443:GhM_D10G0163.1,GhM_D10G0164.1 | AT5G06320 | NHL3; NHL3 | GO:0051607|defense response to virus;GO:0003674|molecular_function;GO:0009617|response to bacterium;GO:0005886|plasma membrane;GO:0042742|defense response to bacterium | GhM_A10G0176.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2474:GhM_D10G1347.1,GhM_D10G1349.1 | AT3G06240 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G1791.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2477:GhM_D10G1406.1,GhM_D10G1409.1 | AT3G07500 | far-red impaired responsive family protein / FAR1 family protein | GO:0005575|cellular_component;GO:0009639|response to red or far red light;GO:0003674|molecular_function | GhM_A10G1717.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2483:GhM_D10G1592.1,GhM_D10G1596.1 | AT5G35810 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G54070.1); Has 446 Blast hits to 440 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_A10G1521.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2486:GhM_D10G1666.1,GhM_D10G1668.1 | AT1G04160 | XIB, ATXIB, XI-8, XI-B; XIB (MYOSIN XI B); motor | GO:0030048|actin filament-based movement;GO:0016459|myosin complex;GO:0003774|motor activity;GO:0048767|root hair elongation | GhM_A10G1455.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2502:GhM_D10G2278.1,GhM_D10G2279.1 | AT3G06730 | thioredoxin family protein | GO:0009579|thylakoid;GO:0009657|plastid organization;GO:0009507|chloroplast;GO:0009295|nucleoid | GhM_A10G2360.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2504:GhM_D10G2315.1,GhM_D10G2316.1 | AT1G32130 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TFIIS N-terminal (InterPro:IPR017923), IWS1, C-terminal (InterPro:IPR008654); BEST Arabidopsis thaliana protein match is: IWS1 C-terminus family protein (TAIR:AT4G19000.1); Has 907 Blast hits to 871 proteins in 182 species: Archae - 4; Bacteria - 14; Metazoa - 417; Fungi - 195; Plants - 42; Viruses - 8; Other Eukaryotes - 227 (source: NCBI BLink). | GO:0009742|brassinosteroid mediated signaling pathway;GO:0032784|regulation of RNA elongation;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A10G2386.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2507:GhM_D10G2393.1,GhM_D10G2394.1 | AT5G16010 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein | GO:0003865|3-oxo-5-alpha-steroid 4-dehydrogenase activity;GO:0009941|chloroplast envelope;GO:0009507|chloroplast;GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors;GO:0006629|lipid metabolic process | GhM_A10G2468.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2509:GhM_D10G2419.1,GhM_D10G2420.1 | AT3G61220 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0047504|(-)-menthol dehydrogenase activity;GO:0047501|(+)-neomenthol dehydrogenase activity;GO:0006952|defense response;GO:0005886|plasma membrane;GO:0016491|oxidoreductase activity | GhM_A10G2504.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2521:GhM_D10G2689.1,GhM_D10G2690.1 | - | - | - | GhM_A10G2763.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2533:GhM_D10G2936.1,GhM_D10G2938.1 | AT1G06970||AT2G13620 | ATCHX15, CHX15; ATCHX15; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||CHX14, ATCHX14; CHX14 (CATION/HYDROGEN EXCHANGER 14); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | GhM_A10G2986.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2544:GhM_D11G0237.1,GhM_D11G0238.1 | - | - | - | GhM_A11G0244.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2548:GhM_D11G0533.1,GhM_D11G0537.1 | AT2G01390 | pentatricopeptide (PPR) repeat-containing protein | GO:0009507|chloroplast | GhM_A11G0545.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2549:GhM_D11G0534.1,GhM_D11G0538.1 | AT4G37220 | stress-responsive protein, putative | GO:0006950|response to stress;GO:0009750|response to fructose stimulus;GO:0009744|response to sucrose stimulus;GO:0003674|molecular_function;GO:0009749|response to glucose stimulus;GO:0005575|cellular_component | GhM_A11G0546.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2550:GhM_D11G0608.1,GhM_D11G0620.1 | AT4G38062 | - | - | GhM_A11G0611.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2551:GhM_D11G0609.1,GhM_D11G0621.1 | AT5G09540 | DNAJ heat shock N-terminal domain-containing protein | GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | GhM_A11G0612.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2552:GhM_D11G0610.1,GhM_D11G0622.1 | AT4G38070 | bHLH family protein | GO:0045449|regulation of transcription;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0005739|mitochondrion | GhM_A11G0613.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2556:GhM_D11G0614.1,GhM_D11G0626.1 | AT4G40080 | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related | GO:0008150|biological_process;GO:0005488|binding;GO:0009507|chloroplast;GO:0005543|phospholipid binding | GhM_A11G0617.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2557:GhM_D11G0615.1,GhM_D11G0627.1 | - | - | - | GhM_A11G0618.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2558:GhM_D11G0616.1,GhM_D11G0628.1 | AT4G40020 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G0619.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2562:GhM_D11G0640.1,GhM_D11G0641.1 | AT5G10190||AT1G78130 | transporter-related||UNE2; UNE2 (unfertilized embryo sac 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0008150|biological_process;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016020|membrane;GO:0005351|sugar:hydrogen symporter activity;GO:0009567|double fertilization forming a zygote and endosperm | GhM_A11G0632.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2566:GhM_D11G0842.1,GhM_D11G0843.1 | AT5G15350 | plastocyanin-like domain-containing protein | GO:0005507|copper ion binding;GO:0046658|anchored to plasma membrane;GO:0031225|anchored to membrane;GO:0005886|plasma membrane;GO:0005773|vacuole;GO:0009055|electron carrier activity | GhM_A11G0824.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2574:GhM_D11G1076.1,GhM_D11G1078.1 | AT4G01290 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G1064.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2577:GhM_D11G1138.1,GhM_D11G1139.1 | AT2G39350||AT3G55110 | ABC transporter family protein | GO:0006810|transport;GO:0009624|response to nematode;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005886|plasma membrane;GO:0016020|membrane | GhM_A12G3303.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2587:GhM_D11G1496.1,GhM_D11G1498.1 | AT2G38870||AT5G43580 | serine-type endopeptidase inhibitor||protease inhibitor, putative | GO:0009611|response to wounding;GO:0006952|defense response;GO:0004867|serine-type endopeptidase inhibitor activity;GO:0005618|cell wall;GO:0050832|defense response to fungus;GO:0005575|cellular_component | GhM_A11G1507.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2595:GhM_D11G1924.1,GhM_D11G1927.1 | AT2G47485 | unknown protein | - | GhM_A11G1940.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2596:GhM_D11G1925.1,GhM_D11G1928.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | GhM_A11G1941.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2597:GhM_D11G1926.1,GhM_D11G1929.1 | AT5G17380 | pyruvate decarboxylase family protein | GO:0000287|magnesium ion binding;GO:0030976|thiamin pyrophosphate binding;GO:0003824|catalytic activity;GO:0016740|transferase activity | GhM_A11G1942.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2601:GhM_D11G2053.1,GhM_D11G2054.1 | AT4G36195 | serine carboxypeptidase S28 family protein | GO:0009505|plant-type cell wall;GO:0008236|serine-type peptidase activity;GO:0006508|proteolysis;GO:0005886|plasma membrane;GO:0005773|vacuole | GhM_A11G2074.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2602:GhM_D11G2055.1,GhM_D11G2056.1 | AT3G51120 | DNA binding / nucleic acid binding / protein binding / zinc ion binding | GO:0005515|protein binding;GO:0016570|histone modification;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0006352|transcription initiation;GO:0008270|zinc ion binding | GhM_A11G2075.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2611:GhM_D11G2412.1,GhM_D11G2414.1 | AT5G13580||AT3G55100 | ABC transporter family protein | GO:0016020|membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport | GhM_A11G2480.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2620:GhM_D11G2834.1,GhM_D11G2835.1 | - | - | - | GhM_A11G2881.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2631:GhM_D11G3133.1,GhM_D11G3135.1 | AT5G28050 | cytidine/deoxycytidylate deaminase family protein | GO:0019692|deoxyribose phosphate metabolic process;GO:0016787|hydrolase activity;GO:0003824|catalytic activity;GO:0009218|pyrimidine ribonucleotide metabolic process;GO:0019690|pyrimidine deoxyribonucleoside interconversion;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0009061|anaerobic respiration | GhM_A11G3216.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2640:GhM_D11G3325.1,GhM_D11G3326.1 | - | - | - | GhM_A11G3412.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2651:GhM_D11G3536.1,GhM_D11G3537.1 | AT5G64620 | C/VIF2, ATC/VIF2; C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor | GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0004857|enzyme inhibitor activity;GO:0046910|pectinesterase inhibitor activity | GhM_A11G3633.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2658:GhM_D11G3602.1,GhM_D11G3605.1 | AT3G14580 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A11G3684.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2681:GhM_D12G0256.1,GhM_D12G0257.1 | AT2G15490 | UGT73B4; UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0012505|endomembrane system;GO:0008194|UDP-glycosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0051707|response to other organism | GhM_A12G0248.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2690:GhM_D12G0411.1,GhM_D12G0412.1 | AT4G35160 | O-methyltransferase family 2 protein | GO:0008168|methyltransferase activity;GO:0008171|O-methyltransferase activity;GO:0005829|cytosol;GO:0046983|protein dimerization activity | GhM_A12G0382.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2695:GhM_D12G0550.1,GhM_D12G0552.1 | AT4G20150 | unknown protein | GO:0008150|biological_process;GO:0005747|mitochondrial respiratory chain complex I;GO:0003674|molecular_function;GO:0005739|mitochondrion;GO:0045271|respiratory chain complex I;GO:0005886|plasma membrane | GhM_A12G0560.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2704:GhM_D12G1175.1,GhM_D12G1176.1 | AT5G10080 | aspartyl protease family protein | GO:0006508|proteolysis;GO:0031225|anchored to membrane;GO:0046658|anchored to plasma membrane | GhM_A12G1251.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2716:GhM_D12G1459.1,GhM_D12G1461.1 | AT4G00850 | GIF3; GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator | GO:0005515|protein binding;GO:0008283|cell proliferation;GO:0005634|nucleus;GO:0003713|transcription coactivator activity;GO:0048366|leaf development | GhM_A12G1516.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2736:GhM_D12G2059.1,GhM_D12G2060.1 | AT1G13360 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A12G2153.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2738:GhM_D12G2077.1,GhM_D12G2083.1 | AT1G29700 | unknown protein | GO:0009507|chloroplast | GhM_A12G2179.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2743:GhM_D12G2468.1,GhM_D12G2469.1 | AT2G45550||AT2G45570 | CYP76C2; CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C4; CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_A12G2583.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2754:GhM_D12G2977.1,GhM_D12G2986.1 | AT5G53220 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A12G3093.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2756:GhM_D12G2979.1,GhM_D12G2987.1 | AT2G44480 | BGLU17; BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0003824|catalytic activity;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | GhM_A12G3099.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2770:GhM_D13G0164.1,GhM_D13G0165.1 | AT5G12010||AT4G29780 | unknown protein | GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0016020|membrane | GhM_A13G0175.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2776:GhM_D13G0308.1,GhM_D13G0310.1 | - | - | - | GhM_A13G0323.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2785:GhM_D13G0647.1,GhM_D13G0648.1 | AT3G19990 | unknown protein | GO:0009570|chloroplast stroma;GO:0008150|biological_process;GO:0009507|chloroplast | GhM_A13G0733.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2797:GhM_D13G0937.1,GhM_D13G0942.1 | AT2G03590 | ATUPS1; ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1); allantoin uptake transmembrane transporter | GO:0012505|endomembrane system;GO:0015720|allantoin transport;GO:0005274|allantoin uptake transmembrane transporter activity | GhM_A13G0983.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2802:GhM_D13G1036.1,GhM_D13G1037.1 | AT1G13520||AT1G13480 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A13G1261.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2809:GhM_D13G1254.1,GhM_D13G1255.1 | AT1G08860 | BON3; BON3 (BONZAI 3); calcium-dependent phospholipid binding | GO:0005544|calcium-dependent phospholipid binding;GO:0010186|positive regulation of cellular defense response;GO:0006499|N-terminal protein myristoylation;GO:0019725|cellular homeostasis | GhM_A13G1355.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2821:GhM_D13G1782.1,GhM_D13G1786.1 | - | - | - | GhM_A13G1893.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2828:GhM_D13G2008.1,GhM_D13G2009.1 | - | - | - | GhM_A13G2119.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2832:GhM_D13G2094.1,GhM_D13G2095.1 | - | - | - | GhM_A13G2208.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2835:GhM_D13G2115.1,GhM_D13G2118.1 | AT5G18390 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_A07G1137.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2836:GhM_D13G2150.1,GhM_D13G2151.1 | - | - | - | GhM_A13G2260.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2845:GhM_D13G2380.1,GhM_D13G2382.1 | AT3G13790 | ATCWINV1, ATBFRUCT1; ATBFRUCT1; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0004564|beta-fructofuranosidase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009611|response to wounding;GO:0005618|cell wall | GhM_A13G2484.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2846:GhM_D13G2415.1,GhM_D13G2416.1 | AT1G31740||AT5G20710 | BGAL7; BGAL7 (beta-galactosidase 7); beta-galactosidase||BGAL15; BGAL15 (beta-galactosidase 15); beta-galactosidase | GO:0012505|endomembrane system;GO:0005990|lactose catabolic process;GO:0005975|carbohydrate metabolic process;GO:0019515|lactose catabolic process via UDP-galactose;GO:0004565|beta-galactosidase activity;GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase;GO:0009341|beta-galactosidase complex | GhM_D07G0190.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2849:GhM_D13G2419.1,GhM_D13G2425.1 | AT3G51440||AT3G51420 | strictosidine synthase family protein||SSL4, ATSSL4; SSL4 (STRICTOSIDINE SYNTHASE-LIKE 4); strictosidine synthase | GO:0012505|endomembrane system;GO:0009821|alkaloid biosynthetic process;GO:0009058|biosynthetic process;GO:0016844|strictosidine synthase activity;GO:0005783|endoplasmic reticulum | GhM_A13G2514.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2865:GhM_D13G2863.1,GhM_D13G2865.1 | AT5G41020 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A13G2960.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2866:GhM_D13G2864.1,GhM_D13G2866.1 | AT5G41020 | myb family transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity | GhM_A13G2960.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2880:GhM_A02G0243.1,GhM_A02G0244.1 | - | - | - | GhM_D02G0239.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2889:GhM_A02G0483.1,GhM_A02G0484.1 | AT1G04540 | C2 domain-containing protein | GO:0008150|biological_process;GO:0016020|membrane | GhM_D02G0478.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2906:GhM_A02G1172.1,GhM_A02G1173.1 | - | - | - | GhM_D03G1054.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2913:GhM_A02G1456.1,GhM_A02G1458.1 | AT1G30500||AT5G12840 | HAP2A, EMB2220, ATHAP2A, NF-YA1; NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor||NF-YA7; NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor | GO:0005634|nucleus;GO:0016602|CCAAT-binding factor complex;GO:0009793|embryonic development ending in seed dormancy;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0006355|regulation of transcription, DNA-dependent;GO:0016566|specific transcriptional repressor activity;GO:0003700|transcription factor activity;GO:0032582|negative regulation of gene-specific transcription | GhM_D03G0852.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2916:GhM_A02G1485.1,GhM_A02G1486.1 | AT3G56750 | unknown protein | GO:0008150|biological_process;GO:0005794|Golgi apparatus;GO:0003674|molecular_function | GhM_D03G0905.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2917:GhM_A02G1505.1,GhM_A02G1506.1 | AT2G29420||AT2G29440 | ATGSTU7, GST25; ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase||ATGSTU6, GST24; ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6); glutathione transferase | GO:0009751|response to salicylic acid stimulus;GO:0009407|toxin catabolic process;GO:0004364|glutathione transferase activity;GO:0005737|cytoplasm | GhM_D03G0623.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2926:GhM_A02G1733.1,GhM_A02G1735.1 | - | - | - | GhM_D03G0459.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2938:GhM_A02G1922.1,GhM_A02G1930.1 | AT2G22790 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D03G0339.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2940:GhM_A02G1925.1,GhM_A02G1932.1 | AT4G37810 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D03G0336.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2942:GhM_A02G1974.1,GhM_A02G1976.1 | AT4G33890||AT5G67410 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D03G0289.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2947:GhM_A02G2177.1,GhM_A02G2178.1 | AT5G66230 | unknown protein | GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D03G0093.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2955:GhM_A03G0028.1,GhM_A03G0029.1 | AT5G45500 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D03G2075.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2957:GhM_A03G0105.1,GhM_A03G0107.1 | AT5G15500 | ankyrin repeat family protein | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0008150|biological_process | GhM_D03G1996.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2980:GhM_A03G0690.1,GhM_A03G0692.1 | AT1G07230 | hydrolase, acting on ester bonds | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds | GhM_D03G1418.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2987:GhM_A03G0857.1,GhM_A03G0858.1 | AT1G06990 | GDSL-motif lipase/hydrolase family protein | GO:0012505|endomembrane system;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process | GhM_D03G1251.1 | 3 | 1 | Gossypium | Cotton | |||
| TA2997:GhM_A03G1126.1,GhM_A03G1132.1 | AT3G51640 | unknown protein | GO:0009507|chloroplast | GhM_D02G1228.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3006:GhM_A03G1525.1,GhM_A03G1526.1 | AT2G02050 | NADH-ubiquinone oxidoreductase B18 subunit, putative | GO:0005747|mitochondrial respiratory chain complex I;GO:0003954|NADH dehydrogenase activity;GO:0006120|mitochondrial electron transport, NADH to ubiquinone;GO:0008137|NADH dehydrogenase (ubiquinone) activity;GO:0005739|mitochondrion;GO:0009853|photorespiration;GO:0045271|respiratory chain complex I;GO:0031966|mitochondrial membrane | GhM_D02G1638.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3007:GhM_A03G1586.1,GhM_A03G1587.1 | AT2G02140||AT1G61070 | LCR66, PDF2.4; LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)||LCR72, PDF2.6; LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72); peptidase inhibitor | GO:0012505|endomembrane system;GO:0006952|defense response;GO:0030414|peptidase inhibitor activity | GhM_D02G1652.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3008:GhM_A03G1617.1,GhM_A03G1619.1 | AT4G37200 | HCF164; HCF164; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | GO:0009507|chloroplast;GO:0009534|chloroplast thylakoid;GO:0010190|cytochrome b6f complex assembly;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;GO:0009535|chloroplast thylakoid membrane | GhM_D02G1691.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3009:GhM_A03G1633.1,GhM_A03G1634.1 | AT1G70830||AT1G70840 | MLP31; MLP31 (MLP-LIKE PROTEIN 31)||MLP28; MLP28 (MLP-LIKE PROTEIN 28) | GO:0006952|defense response;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0009607|response to biotic stimulus | GhM_D02G1699.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3010:GhM_A03G1669.1,GhM_A03G1671.1 | AT1G23010||AT1G71040 | LPR2; LPR2 (Low Phosphate Root2); copper ion binding / oxidoreductase||LPR1; LPR1 (Low Phosphate Root1); copper ion binding / oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor | GO:0005507|copper ion binding;GO:0010073|meristem maintenance;GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005618|cell wall;GO:0016036|cellular response to phosphate starvation;GO:0016020|membrane;GO:0005783|endoplasmic reticulum;GO:0016491|oxidoreductase activity | GhM_D02G1726.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3016:GhM_A03G1930.1,GhM_A03G1932.1 | - | - | - | GhM_A12G1020.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3038:GhM_A03G2772.1,GhM_A03G2773.1 | - | - | - | GhM_D02G2776.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3040:GhM_A04G0014.1,GhM_A04G0015.1 | AT3G13340 | WD-40 repeat family protein | GO:0008150|biological_process;GO:0005834|heterotrimeric G-protein complex;GO:0003674|molecular_function | GhM_D05G4406.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3051:GhM_A04G0216.1,GhM_A04G0220.1 | - | - | - | GhM_A08G2454.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3054:GhM_A04G0254.1,GhM_A04G0256.1 | AT2G20825||AT4G28190 | ULT2; ULT2 (ULTRAPETALA 2); DNA binding||ULT1, ULT; ULT1 (ULTRAPETALA1); DNA binding | GO:0008150|biological_process;GO:0010022|meristem determinacy;GO:0010582|floral meristem determinacy;GO:0010080|regulation of floral meristem growth;GO:0005634|nucleus;GO:0003677|DNA binding;GO:0005829|cytosol;GO:0010081|regulation of inflorescence meristem growth | GhM_D05G4134.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3074:GhM_A04G0873.1,GhM_A04G0875.1 | AT3G52970 | CYP76G1; CYP76G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D04G1332.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3089:GhM_A04G1366.1,GhM_A04G1367.1 | AT4G03320 | tic20-IV; tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV) | - | GhM_D04G1852.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3092:GhM_A04G1451.1,GhM_A04G1454.1 | AT4G38260 | unknown protein | GO:0012505|endomembrane system | GhM_D04G1943.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3123:GhM_A05G0384.1,GhM_A05G0385.1 | AT1G19250 | FMO1; FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); FAD binding / NADP or NADPH binding / electron carrier/ flavin-containing monooxygenase/ monooxygenase/ oxidoreductase | GO:0012505|endomembrane system;GO:0042742|defense response to bacterium;GO:0009055|electron carrier activity;GO:0051707|response to other organism;GO:0010204|defense response signaling pathway, resistance gene-independent;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0009627|systemic acquired resistance;GO:0009626|plant-type hypersensitive response;GO:0050661|NADP or NADPH binding;GO:0031227|intrinsic to endoplasmic reticulum membrane;GO:0050832|defense response to fungus;GO:0050660|FAD binding;GO:0004497|monooxygenase activity;GO:0004499|flavin-containing monooxygenase activity;GO:0016491|oxidoreductase activity | GhM_D05G0404.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3143:GhM_A05G1108.1,GhM_A05G1109.1 | AT3G45650 | NAXT1; NAXT1 (NITRATE EXCRETION TRANSPORTER1); nitrate efflux transmembrane transporter/ transporter | GO:0010447|response to acidity;GO:0010542|nitrate efflux transmembrane transporter activity;GO:0015706|nitrate transport;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0016020|membrane;GO:0005215|transporter activity | GhM_D05G1125.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3177:GhM_A05G2529.1,GhM_A05G2531.1 | AT1G22360||AT1G22380 | AtUGT85A2; AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A3; AtUGT85A3 (UDP-glucosyl transferase 85A3); glucuronosyltransferase/ transcription factor/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | GhM_D05G2539.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3205:GhM_A05G3343.1,GhM_A05G3344.1 | AT1G14480 | protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | GhM_D05G3321.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3206:GhM_A05G3375.1,GhM_A05G3376.1 | AT3G47090 | leucine-rich repeat transmembrane protein kinase, putative | GO:0009507|chloroplast;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | GhM_D05G3347.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3210:GhM_A05G3645.1,GhM_A05G3648.1 | AT1G67810 | SUFE2; SUFE2 (SULFUR E 2); enzyme activator | GO:0008047|enzyme activator activity;GO:0016226|iron-sulfur cluster assembly;GO:0009507|chloroplast;GO:0051176|positive regulation of sulfur metabolic process | GhM_D05G3607.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3218:GhM_A05G3850.1,GhM_A05G3851.1 | - | - | - | GhM_D05G3702.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3240:GhM_A05G4472.1,GhM_A05G4474.1 | AT4G15093 | catalytic LigB subunit of aromatic ring-opening dioxygenase family | GO:0005575|cellular_component | GhM_D04G0479.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3244:GhM_A05G4644.1,GhM_A05G4648.1 | AT2G02240||AT2G02250 | MEE66; MEE66 (maternal effect embryo arrest 66)||AtPP2-B2; AtPP2-B2 (Phloem protein 2-B2); carbohydrate binding | GO:0003674|molecular_function;GO:0009793|embryonic development ending in seed dormancy;GO:0006499|N-terminal protein myristoylation;GO:0030246|carbohydrate binding;GO:0005575|cellular_component | GhM_A04G1071.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3247:GhM_A05G4722.1,GhM_A05G4724.1 | - | - | - | GhM_A03G0202.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3273:GhM_A06G0407.1,GhM_A06G0408.1 | AT4G08850 | kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0006468|protein amino acid phosphorylation | GhM_D06G0418.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3275:GhM_A06G0431.1,GhM_A06G0432.1 | - | - | - | GhM_D06G0456.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3282:GhM_A06G0563.1,GhM_A06G0565.1 | - | - | - | GhM_A09G1192.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3285:GhM_A06G0633.1,GhM_A06G0634.1 | AT3G42170 | DNA binding | GO:0003677|DNA binding;GO:0009791|post-embryonic development | GhM_D06G0628.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3288:GhM_A06G0837.1,GhM_A06G0839.1 | AT4G29440 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D06G0845.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3289:GhM_A06G0838.1,GhM_A06G0840.1 | AT2G19710||AT4G29440 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D06G0845.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3293:GhM_A06G1154.1,GhM_A06G1155.1 | AT4G02040 | unknown protein | GO:0008150|biological_process;GO:0009507|chloroplast;GO:0003674|molecular_function | GhM_D06G1182.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3307:GhM_A06G1772.1,GhM_A06G1773.1 | - | - | - | GhM_A08G1169.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3314:GhM_A06G2086.1,GhM_A06G2087.1 | AT2G31210 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | GhM_D06G2069.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3316:GhM_A06G2107.1,GhM_A06G2108.1 | AT3G44900||AT2G13620 | ATCHX15, CHX15; ATCHX15; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX4, CHX4; ATCHX4 (CATION/H+ EXCHANGER 4); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0015385|sodium:hydrogen antiporter activity;GO:0006812|cation transport;GO:0016021|integral to membrane | GhM_D06G2086.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3326:GhM_A06G2265.1,GhM_A06G2267.1 | AT3G07870 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D06G2246.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3331:GhM_A06G2339.1,GhM_A06G2340.1 | AT3G16360 | AHP4; AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups | GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway;GO:0005737|cytoplasm;GO:0000160|two-component signal transduction system (phosphorelay);GO:0016772|transferase activity, transferring phosphorus-containing groups;GO:0009927|histidine phosphotransfer kinase activity | GhM_D06G2348.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3341:GhM_A06G2583.1,GhM_A06G2584.1 | AT1G28270||AT2G33775 | RALFL4; RALFL4 (ralf-like 4); signal transducer||RALFL19; RALFL19 (ralf-like 19); signal transducer | GO:0007267|cell-cell signaling;GO:0004871|signal transducer activity;GO:0048046|apoplast | GhM_D06G2575.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3345:GhM_A06G2632.1,GhM_A06G2633.1 | AT3G17730||AT1G33280 | anac057; anac057 (Arabidopsis NAC domain containing protein 57); transcription factor||ANAC015; ANAC015 (Arabidopsis NAC domain containing protein 15); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0007275|multicellular organismal development | GhM_D06G2620.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3349:GhM_A07G0095.1,GhM_A07G0097.1 | AT1G77170 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D07G0100.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3350:GhM_A07G0165.1,GhM_A07G0166.1 | AT5G41720 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: F-box protein-related (TAIR:AT1G64290.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D07G0164.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3355:GhM_A07G0323.1,GhM_A07G0324.1 | AT2G41380 | embryo-abundant protein-related | GO:0008168|methyltransferase activity;GO:0046686|response to cadmium ion;GO:0005739|mitochondrion | GhM_D07G0322.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3364:GhM_A07G0677.1,GhM_A07G0678.1 | AT3G26210||AT3G48270||AT3G26200 | CYP71A26; CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B22; CYP71B22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D07G0669.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3378:GhM_A07G1247.1,GhM_A07G1249.1 | AT2G29940 | PDR3, ATPDR3; PDR3 (PLEIOTROPIC DRUG RESISTANCE 3); ATPase, coupled to transmembrane movement of substances | GO:0016020|membrane;GO:0006855|drug transmembrane transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | GhM_D07G1229.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3389:GhM_A07G1857.1,GhM_A07G1858.1 | AT4G28570 | alcohol oxidase-related | GO:0009055|electron carrier activity;GO:0016614|oxidoreductase activity, acting on CH-OH group of donors;GO:0050660|FAD binding;GO:0005783|endoplasmic reticulum;GO:0016491|oxidoreductase activity | GhM_D07G1819.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3391:GhM_A07G1970.1,GhM_A07G1972.1 | AT4G31940 | CYP82C4; CYP82C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | GhM_D07G1917.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3393:GhM_A07G2231.1,GhM_A07G2232.1 | - | - | - | GhM_D10G1955.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3403:GhM_A07G2494.1,GhM_A07G2496.1 | AT1G45616||AT1G47890 | AtRLP7; AtRLP7 (Receptor Like Protein 7); kinase/ protein binding||AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity;GO:0016020|membrane | GhM_D07G2396.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3418:GhM_A07G2882.1,GhM_A07G2884.1 | AT3G03420 | Ku70-binding family protein | GO:0005488|binding;GO:0005575|cellular_component | GhM_D07G2788.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3427:GhM_A08G0088.1,GhM_A08G0089.1 | AT5G58660 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0008150|biological_process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005506|iron ion binding;GO:0005575|cellular_component;GO:0016491|oxidoreductase activity | GhM_D08G0072.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3428:GhM_A08G0231.1,GhM_A08G0232.1 | AT2G31100||AT4G18550 | lipase class 3 family protein||triacylglycerol lipase | GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | GhM_D08G0222.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3432:GhM_A08G0459.1,GhM_A08G0460.1 | AT1G13280 | AOC4; AOC4 (ALLENE OXIDE CYCLASE 4); allene-oxide cyclase | GO:0009695|jasmonic acid biosynthetic process;GO:0005886|plasma membrane;GO:0046423|allene-oxide cyclase activity;GO:0009507|chloroplast | GhM_D12G2079.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3440:GhM_A08G0656.1,GhM_A08G0658.1 | AT2G32270 | ZIP3; ZIP3; zinc ion transmembrane transporter | GO:0012505|endomembrane system;GO:0005385|zinc ion transmembrane transporter activity;GO:0006829|zinc ion transport;GO:0016020|membrane;GO:0016021|integral to membrane | GhM_D08G0627.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3441:GhM_A08G0663.1,GhM_A08G0664.1 | - | - | - | GhM_D08G0632.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3443:GhM_A08G0727.1,GhM_A08G0728.1 | AT5G51160||AT5G15500 | ankyrin repeat family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0012505|endomembrane system | GhM_D08G0692.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3444:GhM_A08G0831.1,GhM_A08G0834.1 | AT5G36740 | PHD finger family protein | GO:0005515|protein binding;GO:0008270|zinc ion binding | GhM_D08G0792.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3456:GhM_A08G1344.1,GhM_A08G1346.1 | AT2G46680 | ATHB-7, ATHB7; ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription activator/ transcription factor | GO:0016563|transcription activator activity;GO:0009737|response to abscisic acid stimulus;GO:0005634|nucleus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0009738|abscisic acid mediated signaling pathway | GhM_D08G1314.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3459:GhM_A08G1504.1,GhM_A08G1505.1 | AT4G35580 | NTL9; NTL9 (NAC transcription factor-like 9); transcription factor | GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | GhM_D08G1346.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3467:GhM_A08G1956.1,GhM_A08G1957.1 | AT1G03940 | transferase family protein | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | GhM_D08G1901.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3501:GhM_A08G3121.1,GhM_A08G3122.1 | - | - | - | GhM_D08G3048.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3513:GhM_A09G0268.1,GhM_A09G0269.1 | AT5G15140 | aldose 1-epimerase family protein | GO:0012505|endomembrane system;GO:0004034|aldose 1-epimerase activity;GO:0005975|carbohydrate metabolic process;GO:0006012|galactose metabolic process;GO:0019318|hexose metabolic process | GhM_D09G0245.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3520:GhM_A09G0551.1,GhM_A09G0554.1 | AT5G52200 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D09G0526.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3521:GhM_A09G0552.1,GhM_A09G0555.1 | AT5G52200 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D09G0526.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3523:GhM_A09G0617.1,GhM_A09G0619.1 | - | - | - | GhM_D09G0468.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3544:GhM_A09G1220.1,GhM_A09G1222.1 | AT5G59330 | lipid binding | GO:0008289|lipid binding;GO:0012505|endomembrane system;GO:0006869|lipid transport | GhM_D09G1152.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3552:GhM_A09G1435.1,GhM_A09G1438.1 | AT5G12410 | THUMP domain-containing protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D09G1346.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3554:GhM_A09G1504.1,GhM_A09G1507.1 | AT1G34420 | leucine-rich repeat family protein / protein kinase family protein | GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0004713|protein tyrosine kinase activity | GhM_D09G1408.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3563:GhM_A09G1802.1,GhM_A09G1804.1 | AT5G03555 | permease, cytosine/purines, uracil, thiamine, allantoin family protein | GO:0016020|membrane | GhM_D09G1693.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3574:GhM_A09G2286.1,GhM_A09G2289.1 | AT1G67290||AT1G14430 | glyoxal oxidase-related | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function | GhM_D09G2190.1 | 3 | 1 | Gossypium | Cotton | |||
| TA3584:GhM_A09G2613.1,GhM_A09G2614.1 | AT5G25850||AT1G55030 | F-box family protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | GhM_D09G2495.1 | 3 | 1 | Gossypium | Cotton | |||
| TA543:GhM_A10G1698.1,GhM_A10G1699.1,GhM_A10G1700.1 | AT1G45616 | AtRLP6; AtRLP6 (Receptor Like Protein 6); protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0016020|membrane;GO:0006952|defense response | - | 3 | 1 | Gossypium | Cotton | |||
| TA545:GhM_A10G1777.1,GhM_A10G1778.1,GhM_A10G1781.1 | AT1G15890||AT5G41750 | disease resistance protein (CC-NBS-LRR class), putative||disease resistance protein (TIR-NBS-LRR class), putative | GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0000166|nucleotide binding;GO:0045087|innate immune response;GO:0006499|N-terminal protein myristoylation;GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0006952|defense response;GO:0007165|signal transduction;GO:0017111|nucleoside-triphosphatase activity;GO:0005575|cellular_component | - | 3 | 1 | Gossypium | Cotton | |||
| TA566:GhM_A10G2907.1,GhM_A10G2909.1,GhM_A10G2913.1 | AT5G48770 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0005515|protein binding;GO:0004888|transmembrane receptor activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0006915|apoptosis;GO:0006952|defense response;GO:0007165|signal transduction;GO:0005524|ATP binding | - | 3 | 1 | Gossypium | Cotton | |||
| TA585:GhM_A11G3074.1,GhM_A11G3076.1,GhM_A11G3077.1 | AT5G06450 | nucleic acid binding | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003676|nucleic acid binding;GO:0005773|vacuole | - | 3 | 1 | Gossypium | Cotton | |||
| TA591:GhM_A11G3583.1,GhM_A11G3584.1,GhM_A11G3585.1 | AT5G45050||AT5G45260 | TTR1, ATWRKY16, WRKY16; TTR1; protein binding / transcription factor||RRS1, ATWRKY52, SLH1; RRS1 (RESISTANT TO RALSTONIA SOLANACEARUM 1); DNA binding / transcription factor | GO:0005515|protein binding;GO:0009615|response to virus;GO:0005634|nucleus;GO:0009626|plant-type hypersensitive response;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0006952|defense response;GO:0009816|defense response to bacterium, incompatible interaction;GO:0008219|cell death;GO:0005886|plasma membrane | - | 3 | 1 | Gossypium | Cotton | |||
| TA630:GhM_A13G1828.1,GhM_A13G1829.1,GhM_A13G1831.1 | AT5G16320 | FRL1; FRL1 (FRIGIDA LIKE 1) | GO:0005575|cellular_component | - | 3 | 1 | Gossypium | Cotton | |||
| TA639:GhM_A13G2376.1,GhM_A13G2378.1,GhM_A13G2379.1 | AT1G65330||AT5G48670 | FEM111, AGL80; AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor||PHE1, AGL37; PHE1 (PHERES1); DNA binding / transcription factor | GO:0005634|nucleus;GO:0009793|embryonic development ending in seed dormancy;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity | - | 3 | 1 | Gossypium | Cotton | |||
| TA640:GhM_A13G2455.1,GhM_A13G2456.1,GhM_A13G2457.1 | AT1G67520||AT4G19810 | glycosyl hydrolase family 18 protein||lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0004672|protein kinase activity;GO:0003824|catalytic activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0005975|carbohydrate metabolic process;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding;GO:0006468|protein amino acid phosphorylation;GO:0004568|chitinase activity;GO:0005618|cell wall;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 3 | 1 | Gossypium | Cotton | |||
| TA646:GhM_D01G0137.1,GhM_D01G0138.1,GhM_D01G0139.1 | AT5G48905 | LCR12; LCR12 (Low-molecular-weight cysteine-rich 12) | GO:0012505|endomembrane system | - | 3 | 1 | Gossypium | Cotton | |||
| TA666:GhM_D02G0227.1,GhM_D02G0228.1,GhM_D02G0230.1 | - | - | - | - | 3 | 1 | Gossypium | Cotton | |||
| TA759:GhM_D06G0411.1,GhM_D06G0413.1,GhM_D06G0416.1 | AT4G08850 | kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Gossypium | Cotton | |||
| TA868:GhM_D10G2284.1,GhM_D10G2285.1,GhM_D10G2286.1 | AT1G24650 | leucine-rich repeat family protein / protein kinase family protein | GO:0012505|endomembrane system;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Gossypium | Cotton | |||
| TA872:GhM_D10G2652.1,GhM_D10G2653.1,GhM_D10G2654.1 | AT3G07000||AT3G48400 | DC1 domain-containing protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0003674|molecular_function;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 3 | 1 | Gossypium | Cotton | |||
| TA876:GhM_D10G2826.1,GhM_D10G2827.1,GhM_D10G2828.1 | AT4G37360||AT4G37310 | CYP81D2; CYP81D2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81H1; CYP81H1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 3 | 1 | Gossypium | Cotton | |||
| TA884:GhM_D11G1870.1,GhM_D11G1871.1,GhM_D11G1872.1 | AT3G14470 | disease resistance protein (NBS-LRR class), putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0006915|apoptosis | - | 3 | 1 | Gossypium | Cotton | |||
| TA899:GhM_D11G3678.1,GhM_D11G3688.1,GhM_D11G3691.1 | AT1G70110||AT2G43690 | lectin protein kinase, putative||lectin protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0030246|carbohydrate binding;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Gossypium | Cotton | |||
| TA977:GhM_A03G2758.1,GhM_A03G2766.1,GhM_A03G2768.1 | - | - | - | - | 3 | 1 | Gossypium | Cotton | |||
| TA980:GhM_A04G0033.1,GhM_A04G0034.1,GhM_A04G0035.1 | AT3G07600 | heavy-metal-associated domain-containing protein | GO:0046872|metal ion binding;GO:0005575|cellular_component;GO:0030001|metal ion transport | - | 3 | 1 | Gossypium | Cotton | |||
| TA1157:GhM_A10G0889.1,GhM_A10G0892.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1174:GhM_A10G1634.1,GhM_A10G1640.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1176:GhM_A10G1678.1,GhM_A10G1680.1 | AT5G41170||AT1G12300 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005739|mitochondrion | - | 2 | 1 | Gossypium | Cotton | |||
| TA1201:GhM_A10G2520.1,GhM_A10G2521.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1215:GhM_A10G2756.1,GhM_A10G2758.1 | AT1G74180||AT5G45800 | MEE62; MEE62 (maternal effect embryo arrest 62); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||AtRLP14; AtRLP14 (Receptor Like Protein 14); protein binding | GO:0005515|protein binding;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0009793|embryonic development ending in seed dormancy;GO:0006468|protein amino acid phosphorylation;GO:0007165|signal transduction;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA1217:GhM_A10G2863.1,GhM_A10G2865.1 | AT1G22370||AT1G22340 | AtUGT85A7; AtUGT85A7 (UDP-glucosyl transferase 85A7); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1233:GhM_A11G0623.1,GhM_A11G0624.1 | AT1G22380||AT1G22340 | AtUGT85A7; AtUGT85A7 (UDP-glucosyl transferase 85A7); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A3; AtUGT85A3 (UDP-glucosyl transferase 85A3); glucuronosyltransferase/ transcription factor/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1297:GhM_A11G3060.1,GhM_A11G3063.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1338:GhM_A11G3953.1,GhM_A11G3954.1 | AT1G65870||AT1G58170 | disease resistance-responsive family protein||disease resistance-responsive protein-related / dirigent protein-related | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response;GO:0009807|lignan biosynthetic process;GO:0005618|cell wall | - | 2 | 1 | Gossypium | Cotton | |||
| TA1348:GhM_A12G0002.1,GhM_A12G0007.1 | AT4G31770 | ATDBR1, DBR1; calcineurin-like phosphoesterase family protein | GO:0009790|embryonic development;GO:0004722|protein serine/threonine phosphatase activity;GO:0005575|cellular_component;GO:0008419|RNA lariat debranching enzyme activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA1371:GhM_A12G0799.1,GhM_A12G0800.1 | AT3G50440||AT2G23610 | ATMES10, MES10; MES10 (METHYL ESTERASE 10); hydrolase/ hydrolase, acting on ester bonds / methyl jasmonate esterase||ATMES3, MES3; MES3 (METHYL ESTERASE 3); hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0016787|hydrolase activity;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1374:GhM_A12G0884.1,GhM_A12G0885.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1385:GhM_A12G1240.1,GhM_A12G1242.1 | AT5G65165 | SDH2-3; SDH2-3; electron carrier/ succinate dehydrogenase | GO:0006121|mitochondrial electron transport, succinate to ubiquinone;GO:0005739|mitochondrion;GO:0000104|succinate dehydrogenase activity;GO:0045281|succinate dehydrogenase complex;GO:0009055|electron carrier activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA1424:GhM_A12G2481.1,GhM_A12G2482.1 | AT1G69940 | ATPPME1, PPME1; PPME1; pectinesterase | GO:0009860|pollen tube growth;GO:0009505|plant-type cell wall;GO:0005794|Golgi apparatus;GO:0030599|pectinesterase activity;GO:0005783|endoplasmic reticulum | - | 2 | 1 | Gossypium | Cotton | |||
| TA1492:GhM_A13G1300.1,GhM_A13G1301.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1526:GhM_A13G2274.1,GhM_A13G2275.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1530:GhM_A13G2348.1,GhM_A13G2349.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1534:GhM_A13G2591.1,GhM_A13G2593.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1540:GhM_A13G2753.1,GhM_A13G2754.1 | AT5G19850 | hydrolase, alpha/beta fold family protein | GO:0016787|hydrolase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA1562:GhM_D01G0391.1,GhM_D01G0395.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1563:GhM_D01G0428.1,GhM_D01G0432.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1564:GhM_D01G0430.1,GhM_D01G0434.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1578:GhM_D01G0757.1,GhM_D01G0758.1 | AT4G03460 | ankyrin repeat family protein | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1585:GhM_D01G0850.1,GhM_D01G0851.1 | AT1G11925 | Encodes a Stigma-specific Stig1 family protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA1586:GhM_D01G0938.1,GhM_D01G0940.1 | AT5G55820 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA1601:GhM_D01G1744.1,GhM_D01G1748.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1606:GhM_D01G2033.1,GhM_D01G2034.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1607:GhM_D01G2039.1,GhM_D01G2040.1 | AT2G21060 | ATGRP2B; ATGRP2B (GLYCINE-RICH PROTEIN 2B); DNA binding / nucleic acid binding / zinc ion binding | GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1646:GhM_D02G0255.1,GhM_D02G0263.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1654:GhM_D02G0461.1,GhM_D02G0465.1 | AT4G14300 | heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA1661:GhM_D02G0571.1,GhM_D02G0590.1 | AT1G16820 | vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related | GO:0016820|hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;GO:0005886|plasma membrane;GO:0015986|ATP synthesis coupled proton transport;GO:0005773|vacuole | - | 2 | 1 | Gossypium | Cotton | |||
| TA1686:GhM_D02G1285.1,GhM_D02G1293.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1752:GhM_D03G0986.1,GhM_D03G0987.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1788:GhM_D03G1949.1,GhM_D03G1955.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1883:GhM_D05G0559.1,GhM_D05G0560.1 | AT5G25610 | RD22; RD22; nutrient reservoir | GO:0012505|endomembrane system;GO:0009737|response to abscisic acid stimulus;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity;GO:0009269|response to desiccation | - | 2 | 1 | Gossypium | Cotton | |||
| TA1925:GhM_D05G2094.1,GhM_D05G2096.1 | AT4G24190 | SHD, HSP90.7; SHD (SHEPHERD); ATP binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0046686|response to cadmium ion;GO:0009934|regulation of meristem structural organization;GO:0005739|mitochondrion;GO:0005783|endoplasmic reticulum;GO:0006457|protein folding;GO:0009651|response to salt stress;GO:0010075|regulation of meristem growth;GO:0009414|response to water deprivation;GO:0009306|protein secretion;GO:0005886|plasma membrane;GO:0016020|membrane;GO:0005524|ATP binding;GO:0005773|vacuole;GO:0009409|response to cold | - | 2 | 1 | Gossypium | Cotton | |||
| TA1958:GhM_D05G3178.1,GhM_D05G3179.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1980:GhM_D05G3907.1,GhM_D05G3915.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1983:GhM_D05G4013.1,GhM_D05G4044.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1984:GhM_D05G4016.1,GhM_D05G4031.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1992:GhM_D05G4198.1,GhM_D05G4216.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA1993:GhM_D05G4227.1,GhM_D05G4228.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2006:GhM_D06G0086.1,GhM_D06G0087.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2037:GhM_D06G1159.1,GhM_D06G1160.1 | AT5G25770 | unknown protein | GO:0008150|biological_process | - | 2 | 1 | Gossypium | Cotton | |||
| TA2042:GhM_D06G1422.1,GhM_D06G1424.1 | ATCG01010 | NDHF; Chloroplast encoded NADH dehydrogenase unit. | GO:0009507|chloroplast;GO:0003954|NADH dehydrogenase activity;GO:0015979|photosynthesis | - | 2 | 1 | Gossypium | Cotton | |||
| TA2074:GhM_D06G2263.1,GhM_D06G2274.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2111:GhM_A01G0446.1,GhM_A01G0457.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2118:GhM_A01G0543.1,GhM_A01G0544.1 | AT5G40170 | AtRLP54; AtRLP54 (Receptor Like Protein 54); kinase/ protein binding | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0006952|defense response;GO:0007165|signal transduction;GO:0016301|kinase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2127:GhM_A01G0794.1,GhM_A01G0796.1 | AT4G03460||AT4G03490 | ankyrin repeat family protein||protein binding | GO:0008150|biological_process;GO:0005515|protein binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA2131:GhM_A01G0815.1,GhM_A01G0817.1 | AT4G04890 | PDF2; PDF2 (PROTODERMAL FACTOR 2); DNA binding / transcription factor | GO:0005634|nucleus;GO:0048825|cotyledon development;GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009913|epidermal cell differentiation | - | 2 | 1 | Gossypium | Cotton | |||
| TA2135:GhM_A01G0887.1,GhM_A01G0888.1 | AT1G11925 | Encodes a Stigma-specific Stig1 family protein | GO:0008150|biological_process;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2142:GhM_A01G1078.1,GhM_A01G1080.1 | AT5G17270 | tetratricopeptide repeat (TPR)-containing protein | GO:0008150|biological_process;GO:0005488|binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA2143:GhM_A01G1079.1,GhM_A01G1081.1 | AT3G12340 | FK506 binding / peptidyl-prolyl cis-trans isomerase | GO:0009543|chloroplast thylakoid lumen;GO:0005528|FK506 binding;GO:0006457|protein folding;GO:0003755|peptidyl-prolyl cis-trans isomerase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2169:GhM_A01G2072.1,GhM_A01G2073.1 | AT2G21060 | ATGRP2B; ATGRP2B (GLYCINE-RICH PROTEIN 2B); DNA binding / nucleic acid binding / zinc ion binding | GO:0006355|regulation of transcription, DNA-dependent;GO:0003677|DNA binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA2174:GhM_A01G2161.1,GhM_A01G2164.1 | AT2G17070 | unknown protein | GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2177:GhM_A01G2217.1,GhM_A01G2223.1 | AT2G22740||AT2G33290 | SUVH2, SDG3, ATSUVH2; SUVH2 (SU(VAR)3-9 HOMOLOG 2); histone methyltransferase||SUVH6; SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | GO:0040029|regulation of gene expression, epigenetic;GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0008168|methyltransferase activity;GO:0010429|methyl-CpNpN binding;GO:0042054|histone methyltransferase activity;GO:0016571|histone methylation;GO:0008327|methyl-CpG binding;GO:0005720|nuclear heterochromatin | - | 2 | 1 | Gossypium | Cotton | |||
| TA2179:GhM_A01G2280.1,GhM_A01G2283.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2232:GhM_D07G1144.1,GhM_D07G1145.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2256:GhM_D07G2131.1,GhM_D07G2134.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2257:GhM_D07G2132.1,GhM_D07G2137.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2258:GhM_D07G2133.1,GhM_D07G2136.1 | ATMG00160 | COX2; cytochrome c oxidase subunit 2 | GO:0009507|chloroplast | - | 2 | 1 | Gossypium | Cotton | |||
| TA2263:GhM_D07G2258.1,GhM_D07G2261.1 | AT1G27435 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2294:GhM_D08G0290.1,GhM_D08G0291.1 | AT1G28130 | GH3.17; GH3.17; indole-3-acetic acid amido synthetase | GO:0005634|nucleus;GO:0009733|response to auxin stimulus;GO:0005737|cytoplasm;GO:0010252|auxin homeostasis;GO:0010279|indole-3-acetic acid amido synthetase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2356:GhM_D08G2951.1,GhM_D08G2953.1 | AT3G60470||AT4G31980 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2404:GhM_D09G1399.1,GhM_D09G1401.1 | AT1G34300 | lectin protein kinase family protein | GO:0004672|protein kinase activity;GO:0005529|sugar binding;GO:0006468|protein amino acid phosphorylation;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2433:GhM_D09G2406.1,GhM_D09G2407.1 | AT1G05510 | Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | GO:0009737|response to abscisic acid stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2466:GhM_D10G0826.1,GhM_D10G0830.1 | AT5G18310 | unknown protein | GO:0008150|biological_process;GO:0005886|plasma membrane;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2470:GhM_D10G0972.1,GhM_D10G0974.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2478:GhM_D10G1440.1,GhM_D10G1442.1 | AT1G12300||AT1G06580 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process;GO:0005739|mitochondrion | - | 2 | 1 | Gossypium | Cotton | |||
| TA2494:GhM_D10G2061.1,GhM_D10G2069.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2524:GhM_D10G2741.1,GhM_D10G2762.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2534:GhM_D10G2962.1,GhM_D10G2963.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2538:GhM_D11G0053.1,GhM_D11G0054.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2553:GhM_D11G0611.1,GhM_D11G0623.1 | AT4G38090 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2613:GhM_D11G2501.1,GhM_D11G2502.1 | AT3G26320||AT3G26300 | CYP71B36; CYP71B36; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0008150|biological_process;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0005506|iron ion binding;GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0004497|monooxygenase activity;GO:0009055|electron carrier activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2652:GhM_D11G3548.1,GhM_D11G3549.1 | AT1G14060 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: GCK (InterPro:IPR012891); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02210.1); Has 243 Blast hits to 215 proteins in 60 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 27; Plants - 49; Viruses - 2; Other Eukaryotes - 70 (source: NCBI BLink). | GO:0006499|N-terminal protein myristoylation | - | 2 | 1 | Gossypium | Cotton | |||
| TA2654:GhM_D11G3562.1,GhM_D11G3571.1 | AT3G49340 | cysteine proteinase, putative | GO:0006508|proteolysis | - | 2 | 1 | Gossypium | Cotton | |||
| TA2673:GhM_D11G3907.1,GhM_D11G3912.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2675:GhM_D11G3942.1,GhM_D11G3943.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2720:GhM_D12G1552.1,GhM_D12G1553.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2727:GhM_D12G1781.1,GhM_D12G1783.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2786:GhM_D13G0703.1,GhM_D13G0706.1 | AT4G03230||AT1G65800 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||ARK2; ARK2 (A. THALIANA RECEPTOR KINASE 2); kinase/ protein kinase/ transmembrane receptor protein serine/threonine kinase | GO:0046777|protein amino acid autophosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005829|cytosol;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0034613|cellular protein localization;GO:0005575|cellular_component;GO:0048544|recognition of pollen;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2799:GhM_D13G1011.1,GhM_D13G1012.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2842:GhM_D13G2272.1,GhM_D13G2274.1 | AT2G37280||AT3G16340 | ATPDR1, PDR1; PDR1; ATPase, coupled to transmembrane movement of substances||PDR5, ATPDR5; PDR5 (PLEIOTROPIC DRUG RESISTANCE 5); ATPase, coupled to transmembrane movement of substances | GO:0005886|plasma membrane;GO:0006855|drug transmembrane transport;GO:0042626|ATPase activity, coupled to transmembrane movement of substances | - | 2 | 1 | Gossypium | Cotton | |||
| TA2885:GhM_A02G0363.1,GhM_A02G0364.1 | AT2G32030||AT2G32020 | GCN5-related N-acetyltransferase (GNAT) family protein | GO:0009737|response to abscisic acid stimulus;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0008080|N-acetyltransferase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA2888:GhM_A02G0470.1,GhM_A02G0471.1 | AT4G14300 | heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putative | GO:0008150|biological_process;GO:0003723|RNA binding;GO:0000166|nucleotide binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA2898:GhM_A02G0798.1,GhM_A02G0799.1 | AT1G07390 | AtRLP1; protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA2959:GhM_A03G0135.1,GhM_A03G0137.1 | AT3G60380 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink). | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA2962:GhM_A03G0252.1,GhM_A03G0254.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA2967:GhM_A03G0405.1,GhM_A03G0407.1 | AT5G58570 | unknown protein | GO:0008150|biological_process | - | 2 | 1 | Gossypium | Cotton | |||
| TA2993:GhM_A03G1072.1,GhM_A03G1074.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3036:GhM_A03G2759.1,GhM_A03G2760.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3037:GhM_A03G2762.1,GhM_A03G2771.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3056:GhM_A04G0299.1,GhM_A04G0303.1 | AT4G13810 | AtRLP47; AtRLP47 (Receptor Like Protein 47); protein binding | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0006952|defense response | - | 2 | 1 | Gossypium | Cotton | |||
| TA3063:GhM_A04G0486.1,GhM_A04G0488.1 | AT4G26090 | RPS2; RPS2 (RESISTANT TO P. SYRINGAE 2); protein binding | GO:0005515|protein binding;GO:0005886|plasma membrane;GO:0009626|plant-type hypersensitive response;GO:0006952|defense response;GO:0016045|detection of bacterium;GO:0042742|defense response to bacterium | - | 2 | 1 | Gossypium | Cotton | |||
| TA3086:GhM_A04G1238.1,GhM_A04G1239.1 | AT5G61160||AT5G39050 | AACT1; AACT1 (anthocyanin 5-aromatic acyltransferase 1); transferase/ transferase, transferring acyl groups other than amino-acyl groups||transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0008150|biological_process;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0016740|transferase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA3096:GhM_A04G1512.1,GhM_A04G1515.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3108:GhM_A04G1746.1,GhM_A04G1749.1 | AT3G04070 | anac047; anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | GO:0045449|regulation of transcription | - | 2 | 1 | Gossypium | Cotton | |||
| TA3130:GhM_A05G0606.1,GhM_A05G0608.1 | AT4G08850 | kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Gossypium | Cotton | |||
| TA3181:GhM_A05G2643.1,GhM_A05G2644.1 | AT4G32640 | protein binding / zinc ion binding | GO:0005515|protein binding;GO:0006886|intracellular protein transport;GO:0030127|COPII vesicle coat;GO:0008270|zinc ion binding;GO:0006888|ER to Golgi vesicle-mediated transport | - | 2 | 1 | Gossypium | Cotton | |||
| TA3183:GhM_A05G2698.1,GhM_A05G2701.1 | AT1G31130||AT4G19950 | unknown protein | GO:0008150|biological_process;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Gossypium | Cotton | |||
| TA3320:GhM_A06G2181.1,GhM_A06G2182.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3344:GhM_A06G2622.1,GhM_A06G2629.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3373:GhM_A07G0961.1,GhM_A07G0964.1 | AT5G39000 | protein kinase family protein | GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Gossypium | Cotton | |||
| TA3376:GhM_A07G1076.1,GhM_A07G1077.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3387:GhM_A07G1803.1,GhM_A07G1806.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3422:GhM_A08G0006.1,GhM_A08G0009.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3447:GhM_A08G0908.1,GhM_A08G0911.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3471:GhM_A08G2116.1,GhM_A08G2117.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3472:GhM_A08G2164.1,GhM_A08G2165.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3475:GhM_A08G2221.1,GhM_A08G2225.1 | AT2G20580 | RPN1A, ATRPN1A; RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A); binding / enzyme regulator | GO:0051726|regulation of cell cycle;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0030234|enzyme regulator activity;GO:0005634|nucleus;GO:0005488|binding;GO:0008540|proteasome regulatory particle, base subcomplex;GO:0030163|protein catabolic process;GO:0005886|plasma membrane | - | 2 | 1 | Gossypium | Cotton | |||
| TA3482:GhM_A08G2553.1,GhM_A08G2554.1 | AT5G21105 | L-ascorbate oxidase/ copper ion binding / oxidoreductase | GO:0005507|copper ion binding;GO:0055114|oxidation reduction;GO:0016491|oxidoreductase activity;GO:0005618|cell wall;GO:0008447|L-ascorbate oxidase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA3499:GhM_A08G3115.1,GhM_A08G3119.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3512:GhM_A09G0234.1,GhM_A09G0236.1 | AT1G35710 | leucine-rich repeat transmembrane protein kinase, putative | GO:0012505|endomembrane system;GO:0005515|protein binding;GO:0004672|protein kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005524|ATP binding;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Gossypium | Cotton | |||
| TA3514:GhM_A09G0277.1,GhM_A09G0284.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3515:GhM_A09G0279.1,GhM_A09G0282.1 | AT1G80660 | AHA9; AHA9; hydrogen-exporting ATPase, phosphorylative mechanism | GO:0005886|plasma membrane;GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism;GO:0015992|proton transport | - | 2 | 1 | Gossypium | Cotton | |||
| TA3525:GhM_A09G0684.1,GhM_A09G0685.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3533:GhM_A09G0909.1,GhM_A09G0910.1 | AT4G24220 | VEP1, AWI31; VEP1 (VEIN PATTERNING 1); binding / catalytic | GO:0003824|catalytic activity;GO:0010051|xylem and phloem pattern formation;GO:0005488|binding;GO:0009611|response to wounding;GO:0005575|cellular_component | - | 2 | 1 | Gossypium | Cotton | |||
| TA3600:GhM_Scaf008G103.1,GhM_Scaf008G104.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3607:GhM_Scaf018G127.1,GhM_Scaf018G130.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton | |||
| TA3610:GhM_Scaf023G144.1,GhM_Scaf023G146.1 | - | - | - | - | 2 | 1 | Gossypium | Cotton |