| PT | Enrich | Tandem genes | ATgene | Description | GO | Scattered genes | Gene number |
Tandem clusters number |
Latin name | Common name | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TA955:rna-TAV2_LOCUS10939,rna-TAV2_LOCUS10936;TA1015:rna-TAV2_LOCUS9084,rna-TAV2_LOCUS11646;TA975:rna-TAV2_LOCUS11273,rna-TAV2_LOCUS9343;TA1374:rna-TAV2_LOCUS19623,rna-TAV2_LOCUS19622 | AT3G44830 | lecithin:cholesterol acyltransferase family protein / LACT family protein | GO:0004607|phosphatidylcholine-sterol O-acyltransferase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | rna-TAV2_LOCUS17520,rna-TAV2_LOCUS18778,rna-TAV2_LOCUS9561,rna-TAV2_LOCUS25365,rna-TAV2_LOCUS12247,rna-TAV2_LOCUS2016,rna-TAV2_LOCUS17531,rna-TAV2_LOCUS21968,rna-TAV2_LOCUS17736,rna-TAV2_LOCUS18850,rna-TAV2_LOCUS22077,rna-TAV2_LOCUS15891,rna-TAV2_LOCUS8919,rna-TAV2_LOCUS7152,rna-TAV2_LOCUS25370,rna-TAV2_LOCUS22144,rna-TAV2_LOCUS3909,rna-TAV2_LOCUS20523,rna-TAV2_LOCUS2419,rna-TAV2_LOCUS14282,rna-TAV2_LOCUS15894,rna-TAV2_LOCUS17172,rna-TAV2_LOCUS17715,rna-TAV2_LOCUS19193,rna-TAV2_LOCUS9383,rna-TAV2_LOCUS9843,rna-TAV2_LOCUS24656,rna-TAV2_LOCUS2006,rna-TAV2_LOCUS20291,rna-TAV2_LOCUS20313,rna-TAV2_LOCUS3868,rna-TAV2_LOCUS7654,rna-TAV2_LOCUS8097,rna-TAV2_LOCUS14383,rna-TAV2_LOCUS24664,rna-TAV2_LOCUS25216,rna-TAV2_LOCUS5721,rna-TAV2_LOCUS4482,rna-TAV2_LOCUS23888,rna-TAV2_LOCUS15741,rna-TAV2_LOCUS24343 | 49 | 4 | Thlaspi arvense | Tarvense | |||
| TA129:rna-TAV2_LOCUS9338,rna-TAV2_LOCUS9339,rna-TAV2_LOCUS8971,rna-TAV2_LOCUS10135,rna-TAV2_LOCUS10134;TA486:rna-TAV2_LOCUS18746,rna-TAV2_LOCUS18740,rna-TAV2_LOCUS18741;TA1339:rna-TAV2_LOCUS18936,rna-TAV2_LOCUS18935;TA558:rna-TAV2_LOCUS24535,rna-TAV2_LOCUS24536,rna-TAV2_LOCUS24537;TA739:rna-TAV2_LOCUS46,rna-TAV2_LOCUS45;TA1218:rna-TAV2_LOCUS16073,rna-TAV2_LOCUS16076;TA734:rna-TAV2_LOCUS4074,rna-TAV2_LOCUS4071;TA383:rna-TAV2_LOCUS10417,rna-TAV2_LOCUS9023,rna-TAV2_LOCUS9022 | AT3G32960||AT1G31150 | unknown protein||transcription factor | GO:0003674|molecular_function;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS16075,rna-TAV2_LOCUS23401,rna-TAV2_LOCUS6176,rna-TAV2_LOCUS6179,rna-TAV2_LOCUS6919,rna-TAV2_LOCUS4072,rna-TAV2_LOCUS17968 | 29 | 8 | Thlaspi arvense | Tarvense | |||
| TA18:rna-TAV2_LOCUS6391,rna-TAV2_LOCUS6390,rna-TAV2_LOCUS6059,rna-TAV2_LOCUS6067,rna-TAV2_LOCUS6068,rna-TAV2_LOCUS6065,rna-TAV2_LOCUS6066,rna-TAV2_LOCUS6063,rna-TAV2_LOCUS6064,rna-TAV2_LOCUS6061;TA1220:rna-TAV2_LOCUS16142,rna-TAV2_LOCUS16143;TA1181:rna-TAV2_LOCUS15208,rna-TAV2_LOCUS15595;TA75:rna-TAV2_LOCUS645,rna-TAV2_LOCUS975,rna-TAV2_LOCUS984,rna-TAV2_LOCUS983,rna-TAV2_LOCUS981,rna-TAV2_LOCUS980 | AT1G58260||AT3G26330||AT3G26310||AT3G26290||AT3G26300||AT3G26230||AT3G26210||AT3G26180||AT5G35715||AT3G53280||AT1G13090||AT1G13110||AT1G13080||AT5G57260||AT5G16420 | CYP71B28; CYP71B28; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B35; CYP71B35; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B20; CYP71B20; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B24; CYP71B24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B8; CYP71B8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B26; CYP71B26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B37; CYP71B37; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B7; CYP71B7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B23; CYP71B23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B10; CYP71B10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B2; CYP71B2 (CYTOCHROME P450 71B2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B34; CYP71B34; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B5; CYP71B5 (CYTOCHROME P450 71B5); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||pentatricopeptide (PPR) repeat-containing protein||CYP79C2, CYP79C3P; CYP79C2 (CYTOCHROME P450 79C2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0010286|heat acclimation;GO:0003674|molecular_function;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0020037|heme binding;GO:0008150|biological_process;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | rna-TAV2_LOCUS12942,rna-TAV2_LOCUS13680,rna-TAV2_LOCUS19732,rna-TAV2_LOCUS10399,rna-TAV2_LOCUS19710,rna-TAV2_LOCUS24205 | 26 | 4 | Thlaspi arvense | Tarvense | |||
| - | AT3G12160||AT5G47960||AT5G65270||AT5G59150||AT3G46830||AT1G07410||AT4G39990||AT1G01200||AT1G09630||AT5G45750||AT2G33870||AT1G28550||AT4G18430||AT4G18800||AT1G16920||AT1G06400||AT5G60860||AT2G43130||AT3G07410||AT2G31680 | AtRABA4a; AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding||AtRABA1c; AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding||ATHSGBP, ATRAB11B, ATRABA1D; ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding||ArRABA1h; ArRABA1h (Arabidopsis Rab GTPase homolog A1h); GTP binding||SMG1, ATRABA4C; ATRABA4C; GTP binding||AtRABA1e; AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding||AtRABA5b; AtRABA5b (Arabidopsis Rab GTPase homolog A5b); GTP binding||ATRABA2B, RAB-A2B, ATRAB-A2B; ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding||ATRABA2D, ATRAB-A2D; ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding||RAB11, ATRABA1B; ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding||ATRABA3, ATRAB-A3; ATRABA3 (ARABIDOPSIS RAB GTPASE HOMOLOG A3); GTP binding||AtRABA5d; AtRABA5d (Arabidopsis Rab GTPase homolog A5d); GTP binding||ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C; ARA4; GTP binding / GTPase/ protein binding||ARA2, ATRABA1A, ATRAB11E, ARA-2; ARA-2; GTP binding||ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A; ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding||AtRABA1i; AtRABA1i (Arabidopsis Rab GTPase homolog A1i); GTP binding||AtRABA1f; AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding||ATRABA4D, RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP binding||ATRABA4B, ATRAB11G, ATGB3, RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding||ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C; ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP binding | GO:0005773|vacuole;GO:0005515|protein binding;GO:0006886|intracellular protein transport;GO:0009860|pollen tube growth;GO:0048219|inter-Golgi cisterna vesicle-mediated transport;GO:0007165|signal transduction;GO:0005525|GTP binding;GO:0012505|endomembrane system;GO:0015031|protein transport;GO:0005886|plasma membrane;GO:0009504|cell plate;GO:0000910|cytokinesis;GO:0009408|response to heat;GO:0032456|endocytic recycling;GO:0045177|apical part of cell;GO:0016020|membrane;GO:0048868|pollen tube development;GO:0005798|Golgi-associated vesicle;GO:0005634|nucleus;GO:0003924|GTPase activity;GO:0006913|nucleocytoplasmic transport;GO:0005795|Golgi stack;GO:0005802|trans-Golgi network;GO:0005768|endosome | rna-TAV2_LOCUS10275,rna-TAV2_LOCUS5487,rna-TAV2_LOCUS21891,rna-TAV2_LOCUS19367,rna-TAV2_LOCUS18112,rna-TAV2_LOCUS8683,rna-TAV2_LOCUS2453,rna-TAV2_LOCUS26321,rna-TAV2_LOCUS13806,rna-TAV2_LOCUS1541,rna-TAV2_LOCUS4027,rna-TAV2_LOCUS4973,rna-TAV2_LOCUS12796,rna-TAV2_LOCUS2317,rna-TAV2_LOCUS25131,rna-TAV2_LOCUS23790,rna-TAV2_LOCUS1456,rna-TAV2_LOCUS182,rna-TAV2_LOCUS8454,rna-TAV2_LOCUS13083,rna-TAV2_LOCUS11400,rna-TAV2_LOCUS12655,rna-TAV2_LOCUS26328 | 23 | 0 | Thlaspi arvense | Tarvense | |||
| TA9:rna-TAV2_LOCUS7875,rna-TAV2_LOCUS7870,rna-TAV2_LOCUS7866,rna-TAV2_LOCUS7867,rna-TAV2_LOCUS7868,rna-TAV2_LOCUS5844,rna-TAV2_LOCUS5843,rna-TAV2_LOCUS7032,rna-TAV2_LOCUS7039,rna-TAV2_LOCUS7040,rna-TAV2_LOCUS7038,rna-TAV2_LOCUS7035,rna-TAV2_LOCUS7033;TA164:rna-TAV2_LOCUS4333,rna-TAV2_LOCUS4332,rna-TAV2_LOCUS4336,rna-TAV2_LOCUS4335,rna-TAV2_LOCUS4337 | AT1G60470||AT1G60450||AT1G60500||AT1G60530||AT2G47180||AT4G26250||AT1G56600 | dynamin family protein||AtGolS4; AtGolS4 (Arabidopsis thaliana galactinol synthase 4); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtGolS2; AtGolS2 (Arabidopsis thaliana galactinol synthase 2); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtGolS7; AtGolS7 (Arabidopsis thaliana galactinol synthase 7); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtGolS6; AtGolS6 (Arabidopsis thaliana galactinol synthase 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtGolS1; AtGolS1 (Arabidopsis thaliana galactinol synthase 1); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016051|carbohydrate biosynthetic process;GO:0003924|GTPase activity;GO:0005525|GTP binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009414|response to water deprivation | rna-TAV2_LOCUS14119,rna-TAV2_LOCUS14157,rna-TAV2_LOCUS7350,rna-TAV2_LOCUS7127 | 22 | 2 | Thlaspi arvense | Tarvense | |||
| TA263:rna-TAV2_LOCUS22318,rna-TAV2_LOCUS22315,rna-TAV2_LOCUS22314,rna-TAV2_LOCUS22313;TA1672:rna-TAV2_LOCUS4865,rna-TAV2_LOCUS4867;TA271:rna-TAV2_LOCUS23748,rna-TAV2_LOCUS23747,rna-TAV2_LOCUS25670,rna-TAV2_LOCUS22897;TA1746:rna-TAV2_LOCUS26123,rna-TAV2_LOCUS26125;TA1671:rna-TAV2_LOCUS4864,rna-TAV2_LOCUS4870 | AT5G57560||AT5G57530||AT4G30270||AT1G65310||AT4G30280||AT5G48070||AT4G14130||AT3G23730||AT5G57550||AT4G30290||AT4G25810 | MERI5B, MERI-5, SEN4; MERI5B (meristem-5); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase||TCH4, XTH22; TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase||ATXTH20, XTH20; XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||ATXTH19, XTH19; XTH19 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||ATXTH17, XTH17; XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative||XTR6, XTH23; XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||XTR7; XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||ATXTH18, XTH18; XTH18 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||XTR3; XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | GO:0006073|cellular glucan metabolic process;GO:0009733|response to auxin stimulus;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0006499|N-terminal protein myristoylation;GO:0009664|plant-type cell wall organization;GO:0009832|plant-type cell wall biogenesis;GO:0005737|cytoplasm;GO:0009828|plant-type cell wall loosening;GO:0005618|cell wall;GO:0009408|response to heat;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009741|response to brassinosteroid stimulus;GO:0009612|response to mechanical stimulus;GO:0009740|gibberellic acid mediated signaling pathway;GO:0009739|response to gibberellin stimulus;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0010583|response to cyclopentenone;GO:0007568|aging;GO:0009505|plant-type cell wall;GO:0048046|apoplast;GO:0009409|response to cold | rna-TAV2_LOCUS8717,rna-TAV2_LOCUS739,rna-TAV2_LOCUS24265,rna-TAV2_LOCUS23271,rna-TAV2_LOCUS10629,rna-TAV2_LOCUS22091,rna-TAV2_LOCUS26124,rna-TAV2_LOCUS8456 | 22 | 5 | Thlaspi arvense | Tarvense | |||
| TA1:rna-TAV2_LOCUS20343,rna-TAV2_LOCUS20345,rna-TAV2_LOCUS20339,rna-TAV2_LOCUS20342,rna-TAV2_LOCUS20341,rna-TAV2_LOCUS20338,rna-TAV2_LOCUS20337,rna-TAV2_LOCUS21825,rna-TAV2_LOCUS21823,rna-TAV2_LOCUS21824,rna-TAV2_LOCUS21822,rna-TAV2_LOCUS21819,rna-TAV2_LOCUS21820,rna-TAV2_LOCUS21817,rna-TAV2_LOCUS21818,rna-TAV2_LOCUS21365,rna-TAV2_LOCUS21364,rna-TAV2_LOCUS21372,rna-TAV2_LOCUS21371 | AT5G56440||AT5G56430||AT4G26340||AT5G56420||AT4G10400||AT5G60610||AT5G56400||AT1G32375||AT5G50270||AT5G56390||AT5G56380||AT5G56370||AT1G09620 | F-box family protein||ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding | GO:0046914|transition metal ion binding;GO:0006418|tRNA aminoacylation for protein translation;GO:0006429|leucyl-tRNA aminoacylation;GO:0006412|translation;GO:0016491|oxidoreductase activity;GO:0003674|molecular_function;GO:0004823|leucine-tRNA ligase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0004812|aminoacyl-tRNA ligase activity;GO:0000166|nucleotide binding;GO:0009507|chloroplast | rna-TAV2_LOCUS12998,rna-TAV2_LOCUS26082 | 21 | 1 | Thlaspi arvense | Tarvense | |||
| TA31:rna-TAV2_LOCUS20939,rna-TAV2_LOCUS20938,rna-TAV2_LOCUS20940,rna-TAV2_LOCUS20943,rna-TAV2_LOCUS20942,rna-TAV2_LOCUS20945,rna-TAV2_LOCUS20946,rna-TAV2_LOCUS18490,rna-TAV2_LOCUS18491;TA83:rna-TAV2_LOCUS9117,rna-TAV2_LOCUS9118,rna-TAV2_LOCUS9113,rna-TAV2_LOCUS9114,rna-TAV2_LOCUS9115,rna-TAV2_LOCUS10997;TA550:rna-TAV2_LOCUS23935,rna-TAV2_LOCUS23938,rna-TAV2_LOCUS23937 | AT5G18020||AT4G38840||AT5G18030||AT5G18080||AT3G03850||AT3G03830||AT3G03840||AT3G03820||AT4G38850||AT4G38860||AT2G21210||AT1G75580||AT4G34760 | SAUR_AC1, ATSAUR15, SAUR15, SAUR-AC1; SAUR15 (SMALL AUXIN UPREGULATED 15)||auxin-responsive protein, putative||auxin-responsive family protein | GO:0005516|calmodulin binding;GO:0003674|molecular_function;GO:0009733|response to auxin stimulus;GO:0005886|plasma membrane;GO:0010200|response to chitin;GO:0005575|cellular_component | rna-TAV2_LOCUS14969,rna-TAV2_LOCUS18111,rna-TAV2_LOCUS25346 | 21 | 3 | Thlaspi arvense | Tarvense | |||
| TA6:rna-TAV2_LOCUS4747,rna-TAV2_LOCUS4748,rna-TAV2_LOCUS4749,rna-TAV2_LOCUS4743,rna-TAV2_LOCUS4744,rna-TAV2_LOCUS4745,rna-TAV2_LOCUS4746,rna-TAV2_LOCUS4742,rna-TAV2_LOCUS4752,rna-TAV2_LOCUS4751,rna-TAV2_LOCUS4741,rna-TAV2_LOCUS4740,rna-TAV2_LOCUS4737,rna-TAV2_LOCUS4750,rna-TAV2_LOCUS4739,rna-TAV2_LOCUS4738;TA1514:rna-TAV2_LOCUS23106,rna-TAV2_LOCUS23105 | AT4G37050||AT2G26560||AT4G37070 | PLP1, PLA IVA; patatin, putative||PLP2, PLA IIA, PLA2A; PLA2A (PHOSPHOLIPASE A 2A); lipase/ nutrient reservoir||PLP4, PLA V; PLP4 (PATATIN-LIKE PROTEIN 4); nutrient reservoir | GO:0009626|plant-type hypersensitive response;GO:0031408|oxylipin biosynthetic process;GO:0046686|response to cadmium ion;GO:0016020|membrane;GO:0005737|cytoplasm;GO:0008152|metabolic process;GO:0016298|lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process;GO:0051607|defense response to virus;GO:0008219|cell death;GO:0045735|nutrient reservoir activity | rna-TAV2_LOCUS22409,rna-TAV2_LOCUS25508 | 20 | 2 | Thlaspi arvense | Tarvense | |||
| TA3:rna-TAV2_LOCUS23248,rna-TAV2_LOCUS23246,rna-TAV2_LOCUS23244,rna-TAV2_LOCUS24166,rna-TAV2_LOCUS26024,rna-TAV2_LOCUS24564,rna-TAV2_LOCUS26038,rna-TAV2_LOCUS25499,rna-TAV2_LOCUS26037,rna-TAV2_LOCUS25500,rna-TAV2_LOCUS25501,rna-TAV2_LOCUS24931,rna-TAV2_LOCUS25243,rna-TAV2_LOCUS22925,rna-TAV2_LOCUS25275,rna-TAV2_LOCUS25274,rna-TAV2_LOCUS24405;TA974:rna-TAV2_LOCUS11267,rna-TAV2_LOCUS11264 | AT5G38940||AT4G14630||AT5G39110||AT5G39120||AT5G39190||AT3G05950||AT3G05930 | manganese ion binding / nutrient reservoir||germin-like protein, putative||GLP8; GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir||GLP2A, ATGER2, GER2; GER2 (GERMIN-LIKE PROTEIN 2); oxalate oxidase||GLP9; GLP9 (GERMIN-LIKE PROTEIN 9); manganese ion binding / nutrient reservoir | GO:0005576|extracellular region;GO:0030145|manganese ion binding;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0000325|plant-type vacuole;GO:0048046|apoplast;GO:0008150|biological_process;GO:0031012|extracellular matrix;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity | - | 19 | 2 | Thlaspi arvense | Tarvense | |||
| TA36:rna-TAV2_LOCUS2416,rna-TAV2_LOCUS3980,rna-TAV2_LOCUS3981,rna-TAV2_LOCUS3982,rna-TAV2_LOCUS3983,rna-TAV2_LOCUS3976,rna-TAV2_LOCUS3977,rna-TAV2_LOCUS3978;TA37:rna-TAV2_LOCUS744,rna-TAV2_LOCUS743,rna-TAV2_LOCUS2248,rna-TAV2_LOCUS2255,rna-TAV2_LOCUS2256,rna-TAV2_LOCUS2253,rna-TAV2_LOCUS2254,rna-TAV2_LOCUS2251;TA323:rna-TAV2_LOCUS3098,rna-TAV2_LOCUS3099,rna-TAV2_LOCUS3092 | AT5G46930 | invertase/pectin methylesterase inhibitor family protein | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 19 | 3 | Thlaspi arvense | Tarvense | |||
| TA2:rna-TAV2_LOCUS12432,rna-TAV2_LOCUS13348,rna-TAV2_LOCUS13352,rna-TAV2_LOCUS13353,rna-TAV2_LOCUS13350,rna-TAV2_LOCUS13705,rna-TAV2_LOCUS14389,rna-TAV2_LOCUS13707,rna-TAV2_LOCUS13381,rna-TAV2_LOCUS13385,rna-TAV2_LOCUS13384,rna-TAV2_LOCUS13386,rna-TAV2_LOCUS12304,rna-TAV2_LOCUS12311,rna-TAV2_LOCUS12312,rna-TAV2_LOCUS12307,rna-TAV2_LOCUS14063 | AT2G22740||AT2G35160 | SUVH5, SGD9; SUVH5 (SU(VAR)3-9 HOMOLOG 5); histone methyltransferase||SUVH6; SUVH6; methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / methyltransferase | GO:0031048|chromatin silencing by small RNA;GO:0010216|maintenance of DNA methylation;GO:0040029|regulation of gene expression, epigenetic;GO:0008327|methyl-CpG binding;GO:0010200|response to chitin;GO:0016571|histone methylation;GO:0008168|methyltransferase activity;GO:0010428|methyl-CpNpG binding;GO:0005634|nucleus;GO:0042054|histone methyltransferase activity;GO:0010429|methyl-CpNpN binding | rna-TAV2_LOCUS12876 | 18 | 1 | Thlaspi arvense | Tarvense | |||
| TA5:rna-TAV2_LOCUS20554,rna-TAV2_LOCUS21264,rna-TAV2_LOCUS19085,rna-TAV2_LOCUS19082,rna-TAV2_LOCUS19081,rna-TAV2_LOCUS19084,rna-TAV2_LOCUS19083,rna-TAV2_LOCUS22296,rna-TAV2_LOCUS22367,rna-TAV2_LOCUS21518,rna-TAV2_LOCUS21393,rna-TAV2_LOCUS21519,rna-TAV2_LOCUS21520,rna-TAV2_LOCUS21521,rna-TAV2_LOCUS22369,rna-TAV2_LOCUS20056 | AT4G13985||AT5G53637||AT5G53635||AT5G22670||AT1G66300||AT3G23955||AT1G51370 | ||F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G25850.1).||FBD1; FBD1 (FBD-ASSOCIATED F-BOX PROTEIN) | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS20367,rna-TAV2_LOCUS511 | 18 | 1 | Thlaspi arvense | Tarvense | |||
| TA8:rna-TAV2_LOCUS8040,rna-TAV2_LOCUS8030,rna-TAV2_LOCUS8032,rna-TAV2_LOCUS8033,rna-TAV2_LOCUS8034,rna-TAV2_LOCUS8035,rna-TAV2_LOCUS8154,rna-TAV2_LOCUS8153,rna-TAV2_LOCUS5996,rna-TAV2_LOCUS5995,rna-TAV2_LOCUS5994,rna-TAV2_LOCUS5759,rna-TAV2_LOCUS5758,rna-TAV2_LOCUS6935;TA181:rna-TAV2_LOCUS5277,rna-TAV2_LOCUS7024,rna-TAV2_LOCUS7023,rna-TAV2_LOCUS7026 | AT1G61970||AT1G62085||AT1G61980||AT1G61990||AT1G62110||AT1G61960 | mitochondrial transcription termination factor-related / mTERF-related||mitochondrial transcription termination factor family protein / mTERF family protein | GO:0003674|molecular_function;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus;GO:0005739|mitochondrion | - | 18 | 2 | Thlaspi arvense | Tarvense | |||
| TA100:rna-TAV2_LOCUS4724,rna-TAV2_LOCUS4730,rna-TAV2_LOCUS4731,rna-TAV2_LOCUS4727,rna-TAV2_LOCUS4726,rna-TAV2_LOCUS4723;TA101:rna-TAV2_LOCUS18424,rna-TAV2_LOCUS18426,rna-TAV2_LOCUS18425,rna-TAV2_LOCUS18420,rna-TAV2_LOCUS18419,rna-TAV2_LOCUS18423;TA541:rna-TAV2_LOCUS23165,rna-TAV2_LOCUS23166,rna-TAV2_LOCUS23163 | AT4G37980||AT4G37970||AT4G37990||AT4G39330||AT2G21730 | ATCAD9, CAD9; CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9); binding / catalytic/ oxidoreductase/ zinc ion binding||ATCAD6, CAD6; CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6); binding / catalytic/ oxidoreductase/ zinc ion binding||ELI3-1, ELI3, ATCAD7, CAD7; ELI3-1 (ELICITOR-ACTIVATED GENE 3-1); binding / catalytic/ oxidoreductase/ zinc ion binding||CAD2, ATCAD2; CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2); binding / catalytic/ oxidoreductase/ zinc ion binding||ELI3-2, ELI3, ATCAD8, CAD-B2; ELI3-2 (ELICITOR-ACTIVATED GENE 3-2); aryl-alcohol dehydrogenase/ mannitol dehydrogenase | GO:0009626|plant-type hypersensitive response;GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0048046|apoplast;GO:0008152|metabolic process;GO:0009617|response to bacterium;GO:0005575|cellular_component;GO:0018456|aryl-alcohol dehydrogenase activity | rna-TAV2_LOCUS13832,rna-TAV2_LOCUS22840,rna-TAV2_LOCUS24417 | 18 | 3 | Thlaspi arvense | Tarvense | |||
| TA13:rna-TAV2_LOCUS6458,rna-TAV2_LOCUS6459,rna-TAV2_LOCUS5047,rna-TAV2_LOCUS5046,rna-TAV2_LOCUS5048,rna-TAV2_LOCUS5043,rna-TAV2_LOCUS5044,rna-TAV2_LOCUS6218,rna-TAV2_LOCUS6219,rna-TAV2_LOCUS6220,rna-TAV2_LOCUS7385;TA779:rna-TAV2_LOCUS5577,rna-TAV2_LOCUS5576;TA114:rna-TAV2_LOCUS5280,rna-TAV2_LOCUS7384,rna-TAV2_LOCUS7383,rna-TAV2_LOCUS7382,rna-TAV2_LOCUS7381 | AT2G42460||AT2G42470||AT2G42475||AT2G42465||AT2G42480 | ||meprin and TRAF homology domain-containing protein / MATH domain-containing protein | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 18 | 3 | Thlaspi arvense | Tarvense | |||
| TA95:rna-TAV2_LOCUS20018,rna-TAV2_LOCUS20019,rna-TAV2_LOCUS20020,rna-TAV2_LOCUS20021,rna-TAV2_LOCUS19368,rna-TAV2_LOCUS19357;TA328:rna-TAV2_LOCUS3639,rna-TAV2_LOCUS1214,rna-TAV2_LOCUS1215;TA527:rna-TAV2_LOCUS22097,rna-TAV2_LOCUS22098,rna-TAV2_LOCUS22103 | AT5G59100||AT5G59120||AT5G59130||AT5G59190||AT5G58830||AT5G58840||AT5G59090||AT3G46840 | identical protein binding / serine-type endopeptidase||ATSBT4.12; ATSBT4.12; identical protein binding / serine-type endopeptidase||ATSBT4.13; ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13); identical protein binding / serine-type endopeptidase||subtilase family protein | GO:0046686|response to cadmium ion;GO:0043086|negative regulation of catalytic activity;GO:0005737|cytoplasm;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0048046|apoplast;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0006508|proteolysis;GO:0042802|identical protein binding | rna-TAV2_LOCUS18651,rna-TAV2_LOCUS18654,rna-TAV2_LOCUS22057,rna-TAV2_LOCUS21470,rna-TAV2_LOCUS916,rna-TAV2_LOCUS18113 | 18 | 3 | Thlaspi arvense | Tarvense | |||
| TA4:rna-TAV2_LOCUS481,rna-TAV2_LOCUS482,rna-TAV2_LOCUS483,rna-TAV2_LOCUS3885,rna-TAV2_LOCUS3884,rna-TAV2_LOCUS1939,rna-TAV2_LOCUS1938,rna-TAV2_LOCUS1937,rna-TAV2_LOCUS1943,rna-TAV2_LOCUS1941,rna-TAV2_LOCUS1940,rna-TAV2_LOCUS3525,rna-TAV2_LOCUS3526,rna-TAV2_LOCUS3523,rna-TAV2_LOCUS3524,rna-TAV2_LOCUS3521 | AT1G52030||AT3G16410||AT1G52070||AT5G35940||AT1G60095||AT1G60110||AT5G38550||AT5G49870||AT1G52130||AT1G58160 | MBP2, MBP1.2, F-ATMBP; MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding||NSP4; NSP4 (NITRILE SPECIFIER PROTEIN 4)||EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: jacalin lectin family protein (TAIR:AT1G60130.1); Has 1392 Blast hits to 461 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1390; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).||jacalin lectin family protein | ;GO:0005529|sugar binding;GO:0003674|molecular_function;GO:0009908|flower development;GO:0007155|cell adhesion;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0010180|thioglucosidase binding;GO:0010169|thioglucosidase complex;GO:0006952|defense response;GO:0009611|response to wounding;GO:0019762|glucosinolate catabolic process | rna-TAV2_LOCUS8148 | 17 | 1 | Thlaspi arvense | Tarvense | |||
| TA12:rna-TAV2_LOCUS12819,rna-TAV2_LOCUS12723,rna-TAV2_LOCUS12724,rna-TAV2_LOCUS13781,rna-TAV2_LOCUS14716,rna-TAV2_LOCUS14717,rna-TAV2_LOCUS12965,rna-TAV2_LOCUS12964,rna-TAV2_LOCUS12973,rna-TAV2_LOCUS12972,rna-TAV2_LOCUS12971,rna-TAV2_LOCUS12970;TA443:rna-TAV2_LOCUS14571,rna-TAV2_LOCUS14569,rna-TAV2_LOCUS13552 | AT4G38940||AT2G30330||AT3G10510||AT5G03000||AT4G11770 | kelch repeat-containing F-box family protein||GCN5L1 family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS7457,rna-TAV2_LOCUS1408 | 17 | 2 | Thlaspi arvense | Tarvense | |||
| TA16:rna-TAV2_LOCUS16167,rna-TAV2_LOCUS18094,rna-TAV2_LOCUS18095,rna-TAV2_LOCUS18100,rna-TAV2_LOCUS18101,rna-TAV2_LOCUS18102,rna-TAV2_LOCUS18103,rna-TAV2_LOCUS18096,rna-TAV2_LOCUS18097,rna-TAV2_LOCUS18098,rna-TAV2_LOCUS18099;TA155:rna-TAV2_LOCUS24561,rna-TAV2_LOCUS24559,rna-TAV2_LOCUS24082,rna-TAV2_LOCUS25606,rna-TAV2_LOCUS25597 | AT3G58460||AT3G58410||AT3G58380||AT3G58350||AT3G58300||AT3G58270||AT2G05400||AT3G27040||AT3G58210||AT3G58440||AT3G58370 | unknown protein||ATRBL15; ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)||K-Cl Co-transporter type 1 protein-related / KCC1 protein-related||meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0016021|integral to membrane;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS15514 | 17 | 2 | Thlaspi arvense | Tarvense | |||
| TA7:rna-TAV2_LOCUS13054,rna-TAV2_LOCUS13354,rna-TAV2_LOCUS13351,rna-TAV2_LOCUS13349,rna-TAV2_LOCUS13055,rna-TAV2_LOCUS14391,rna-TAV2_LOCUS13706,rna-TAV2_LOCUS14388,rna-TAV2_LOCUS13388,rna-TAV2_LOCUS13387,rna-TAV2_LOCUS12310,rna-TAV2_LOCUS12313,rna-TAV2_LOCUS12306,rna-TAV2_LOCUS12309,rna-TAV2_LOCUS14062;TA1071:rna-TAV2_LOCUS12614,rna-TAV2_LOCUS12615 | AT2G22730||AT3G11080 | AtRLP35; AtRLP35 (Receptor Like Protein 35); kinase/ protein binding||transporter-related | GO:0016020|membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005351|sugar:hydrogen symporter activity | - | 17 | 2 | Thlaspi arvense | Tarvense | |||
| TA21:rna-TAV2_LOCUS16094,rna-TAV2_LOCUS16091,rna-TAV2_LOCUS16089,rna-TAV2_LOCUS16090,rna-TAV2_LOCUS16087,rna-TAV2_LOCUS16088,rna-TAV2_LOCUS18032,rna-TAV2_LOCUS18037,rna-TAV2_LOCUS18036,rna-TAV2_LOCUS18035;TA72:rna-TAV2_LOCUS1773,rna-TAV2_LOCUS1774,rna-TAV2_LOCUS1778,rna-TAV2_LOCUS1063,rna-TAV2_LOCUS311,rna-TAV2_LOCUS310 | AT1G70830||AT1G70840||AT1G70850||AT1G70880||AT1G70890||AT5G28010||AT1G23130||AT1G35260 | MLP34; MLP34 (MLP-LIKE PROTEIN 34)||MLP31; MLP31 (MLP-LIKE PROTEIN 31)||MLP28; MLP28 (MLP-LIKE PROTEIN 28)||MLP165; MLP165 (MLP-LIKE PROTEIN 165)||MLP43; MLP43 (MLP-LIKE PROTEIN 43)||Bet v I allergen family protein | GO:0003674|molecular_function;GO:0009607|response to biotic stimulus;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0006952|defense response | - | 16 | 2 | Thlaspi arvense | Tarvense | |||
| TA10:rna-TAV2_LOCUS5141,rna-TAV2_LOCUS5142,rna-TAV2_LOCUS5143,rna-TAV2_LOCUS5555,rna-TAV2_LOCUS5302,rna-TAV2_LOCUS5303,rna-TAV2_LOCUS5299,rna-TAV2_LOCUS7549,rna-TAV2_LOCUS7550,rna-TAV2_LOCUS7548,rna-TAV2_LOCUS7545,rna-TAV2_LOCUS7546 | AT1G74090||AT1G18590 | SOT18, ATSOT18, ATST5B; SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18); 3-methylthiopropyl-desulfoglucosinolate sulfotransferase/ 4-methylthiobutyl-desulfoglucosinolate sulfotransferase/ 5-methylthiopentyl-desulfoglucosinolate sulfotransferase/ 7-methylthioheptyl-desulfogluco||SOT17, ATSOT17, ATST5C; SOT17 (SULFOTRANSFERASE 17); desulfoglucosinolate sulfotransferase/ sulfotransferase | GO:0047364|desulfoglucosinolate sulfotransferase activity;GO:0019761|glucosinolate biosynthetic process;GO:0008146|sulfotransferase activity;GO:0005575|cellular_component | rna-TAV2_LOCUS415,rna-TAV2_LOCUS24527,rna-TAV2_LOCUS19075 | 15 | 1 | Thlaspi arvense | Tarvense | |||
| TA86:rna-TAV2_LOCUS13397,rna-TAV2_LOCUS13398,rna-TAV2_LOCUS13395,rna-TAV2_LOCUS13396,rna-TAV2_LOCUS13393,rna-TAV2_LOCUS13394;TA1545:rna-TAV2_LOCUS23797,rna-TAV2_LOCUS24628;TA139:rna-TAV2_LOCUS16787,rna-TAV2_LOCUS16791,rna-TAV2_LOCUS16792,rna-TAV2_LOCUS16793,rna-TAV2_LOCUS16794 | AT3G60120||AT5G24540||AT2G44460||AT2G44450||AT5G44640||AT3G60140||AT3G60130 | BGLU31; BGLU31 (BETA GLUCOSIDASE 31); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU15; BGLU15 (BETA GLUCOSIDASE 15); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||DIN2, SRG2, BGLU30; DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU28; BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU13; BGLU13 (BETA GLUCOSIDASE 13); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU16; BGLU16 (BETA GLUCOSIDASE 16); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU27; BGLU27 (BETA GLUCOSIDASE 27); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0016020|membrane;GO:0009744|response to sucrose stimulus;GO:0007568|aging;GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0005618|cell wall;GO:0005575|cellular_component;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding;GO:0009416|response to light stimulus | rna-TAV2_LOCUS5258,rna-TAV2_LOCUS16085 | 15 | 3 | Thlaspi arvense | Tarvense | |||
| TA338:rna-TAV2_LOCUS609,rna-TAV2_LOCUS611,rna-TAV2_LOCUS71;TA393:rna-TAV2_LOCUS11557,rna-TAV2_LOCUS11556,rna-TAV2_LOCUS11563;TA640:rna-TAV2_LOCUS1674,rna-TAV2_LOCUS1676;TA935:rna-TAV2_LOCUS10371,rna-TAV2_LOCUS11512;TA1081:rna-TAV2_LOCUS12934,rna-TAV2_LOCUS12933;TA1224:rna-TAV2_LOCUS16252,rna-TAV2_LOCUS17184 | AT1G33540||AT3G12240||AT3G12220||AT3G10450||AT3G10410||AT2G22920||AT2G22980||AT1G73280||AT1G73300||AT2G23000 | SCPL12; serine carboxypeptidase S10 family protein||scpl10; scpl10 (serine carboxypeptidase-like 10); serine-type carboxypeptidase||SCPL7; SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7); serine-type carboxypeptidase||SCPL15; SCPL15 (serine carboxypeptidase-like 15); serine-type carboxypeptidase||scpl16; scpl16 (serine carboxypeptidase-like 16); serine-type carboxypeptidase||scpl3; scpl3 (serine carboxypeptidase-like 3); serine-type carboxypeptidase||scpl2; scpl2 (serine carboxypeptidase-like 2); serine-type carboxypeptidase||scpl49; scpl49 (serine carboxypeptidase-like 49); serine-type carboxypeptidase||SCPL13; serine-type carboxypeptidase||scpl18; scpl18 (serine carboxypeptidase-like 18); serine-type carboxypeptidase | GO:0005773|vacuole;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0009505|plant-type cell wall | rna-TAV2_LOCUS14615 | 15 | 6 | Thlaspi arvense | Tarvense | |||
| TA453:rna-TAV2_LOCUS15803,rna-TAV2_LOCUS15801,rna-TAV2_LOCUS16970 | AT5G62690||AT1G75780||AT5G44340||AT5G23860||AT5G12250||AT4G20890 | TUB6; TUB6 (BETA-6 TUBULIN); structural constituent of cytoskeleton||TUB9; TUB9; GTP binding / GTPase/ structural molecule||TUB1; TUB1; GTP binding / GTPase/ structural molecule||TUB4; TUB4; structural constituent of cytoskeleton||TUB2; TUB2; GTP binding / GTPase/ structural molecule||TUB8; TUB8; structural constituent of cytoskeleton | GO:0005773|vacuole;GO:0046686|response to cadmium ion;GO:0005515|protein binding;GO:0007017|microtubule-based process;GO:0015630|microtubule cytoskeleton;GO:0005886|plasma membrane;GO:0005525|GTP binding;GO:0009507|chloroplast;GO:0005618|cell wall;GO:0005730|nucleolus;GO:0005198|structural molecule activity;GO:0051258|protein polymerization;GO:0009651|response to salt stress;GO:0005200|structural constituent of cytoskeleton;GO:0003924|GTPase activity;GO:0045298|tubulin complex;GO:0010583|response to cyclopentenone;GO:0009409|response to cold;GO:0007018|microtubule-based movement | rna-TAV2_LOCUS13908,rna-TAV2_LOCUS13909,rna-TAV2_LOCUS7479,rna-TAV2_LOCUS20381,rna-TAV2_LOCUS18066,rna-TAV2_LOCUS26086,rna-TAV2_LOCUS15810,rna-TAV2_LOCUS16953,rna-TAV2_LOCUS6792,rna-TAV2_LOCUS25183,rna-TAV2_LOCUS7710 | 14 | 1 | Thlaspi arvense | Tarvense | |||
| TA14:rna-TAV2_LOCUS7605,rna-TAV2_LOCUS5561,rna-TAV2_LOCUS5560,rna-TAV2_LOCUS5591,rna-TAV2_LOCUS6749,rna-TAV2_LOCUS6750,rna-TAV2_LOCUS6754,rna-TAV2_LOCUS6752,rna-TAV2_LOCUS6757,rna-TAV2_LOCUS6756,rna-TAV2_LOCUS7954;TA376:rna-TAV2_LOCUS7606,rna-TAV2_LOCUS5590,rna-TAV2_LOCUS5559 | AT4G36150||AT5G45050||AT5G45060||AT5G45250||AT5G45230||AT5G45210||AT5G45220||AT2G17060 | disease resistance protein (TIR-NBS-LRR class), putative||TTR1, ATWRKY16, WRKY16; TTR1; protein binding / transcription factor||RPS4; RPS4 (RESISTANT TO P. SYRINGAE 4); receptor||Toll-Interleukin-Resistance (TIR) domain-containing protein | GO:0009626|plant-type hypersensitive response;GO:0004872|receptor activity;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0009615|response to virus;GO:0009507|chloroplast;GO:0045087|innate immune response;GO:0003700|transcription factor activity;GO:0004888|transmembrane receptor activity;GO:0042742|defense response to bacterium;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0016020|membrane;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0005524|ATP binding;GO:0006915|apoptosis | - | 14 | 2 | Thlaspi arvense | Tarvense | |||
| TA15:rna-TAV2_LOCUS14640,rna-TAV2_LOCUS14634,rna-TAV2_LOCUS14636,rna-TAV2_LOCUS13413,rna-TAV2_LOCUS13415,rna-TAV2_LOCUS13414,rna-TAV2_LOCUS13441,rna-TAV2_LOCUS13440,rna-TAV2_LOCUS12802,rna-TAV2_LOCUS12803,rna-TAV2_LOCUS12804;TA1250:rna-TAV2_LOCUS16899,rna-TAV2_LOCUS15701 | AT2G30670||AT2G29370||AT2G29350||AT2G29320||AT2G29310||AT1G07440||AT1G07450 | tropinone reductase, putative / tropine dehydrogenase, putative||SAG13; SAG13; alcohol dehydrogenase/ oxidoreductase | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0007568|aging;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0005575|cellular_component | rna-TAV2_LOCUS2971 | 14 | 2 | Thlaspi arvense | Tarvense | |||
| TA47:rna-TAV2_LOCUS18890,rna-TAV2_LOCUS19163,rna-TAV2_LOCUS19161,rna-TAV2_LOCUS19160,rna-TAV2_LOCUS21606,rna-TAV2_LOCUS21607,rna-TAV2_LOCUS21605,rna-TAV2_LOCUS21608;TA143:rna-TAV2_LOCUS18453,rna-TAV2_LOCUS19893,rna-TAV2_LOCUS19891,rna-TAV2_LOCUS18444,rna-TAV2_LOCUS19412 | AT1G35520||AT1G35540||AT2G46530||AT4G23980||AT1G34390||AT1G34410 | ARF21; ARF21 (AUXIN RESPONSE FACTOR 21); transcription factor||ARF15; ARF15 (AUXIN RESPONSE FACTOR 15); transcription factor||ARF9; ARF9 (AUXIN RESPONSE FACTOR 9); transcription factor||ARF14; ARF14 (AUXIN RESPONSE FACTOR 14); transcription factor||ARF22; ARF22 (AUXIN RESPONSE FACTOR 22); transcription factor||ARF11; ARF11 (AUXIN RESPONSE FACTOR 11); transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0012505|endomembrane system;GO:0005634|nucleus | rna-TAV2_LOCUS20709 | 14 | 2 | Thlaspi arvense | Tarvense | |||
| TA106:rna-TAV2_LOCUS1724,rna-TAV2_LOCUS1722,rna-TAV2_LOCUS1720,rna-TAV2_LOCUS1719,rna-TAV2_LOCUS1717;TA260:rna-TAV2_LOCUS22084,rna-TAV2_LOCUS22083,rna-TAV2_LOCUS20625,rna-TAV2_LOCUS20626;TA110:rna-TAV2_LOCUS3136,rna-TAV2_LOCUS3139,rna-TAV2_LOCUS3140,rna-TAV2_LOCUS3137,rna-TAV2_LOCUS3138 | AT1G75950||AT4G34210||AT4G34470||AT1G20140 | SKP1, ASK1, ATSKP1, SKP1A, UIP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase||ASK4; ASK4 (ARABIDOPSIS SKP1-LIKE 4); protein binding / ubiquitin-protein ligase||ASK12; ASK12 (ARABIDOPSIS SKP1-LIKE 12); protein binding / ubiquitin-protein ligase||ASK11; ASK11 (ARABIDOPSIS SKP1-LIKE 11); protein binding / ubiquitin-protein ligase | GO:0007140|male meiosis;GO:0046686|response to cadmium ion;GO:0005819|spindle;GO:0005515|protein binding;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004842|ubiquitin-protein ligase activity;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0007067|mitosis;GO:0045910|negative regulation of DNA recombination;GO:0012505|endomembrane system;GO:0019005|SCF ubiquitin ligase complex;GO:0000151|ubiquitin ligase complex;GO:0005634|nucleus | - | 14 | 3 | Thlaspi arvense | Tarvense | |||
| TA99:rna-TAV2_LOCUS26087,rna-TAV2_LOCUS26083,rna-TAV2_LOCUS26090,rna-TAV2_LOCUS26089,rna-TAV2_LOCUS23856,rna-TAV2_LOCUS23249;TA1127:rna-TAV2_LOCUS13899,rna-TAV2_LOCUS13905;TA683:rna-TAV2_LOCUS2668,rna-TAV2_LOCUS3108 | AT4G20860||AT4G20840||AT4G20830||AT4G20800||AT1G26390||AT1G26420||AT1G01980||AT1G31150 | ATSEC1A, SEC1A; ATSEC1A; FAD binding / catalytic/ electron carrier/ oxidoreductase||FAD-binding domain-containing protein||transcription factor | GO:0005773|vacuole;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0050660|FAD binding;GO:0048046|apoplast;GO:0006979|response to oxidative stress;GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0009055|electron carrier activity | rna-TAV2_LOCUS3664,rna-TAV2_LOCUS13382,rna-TAV2_LOCUS13417,rna-TAV2_LOCUS2114 | 14 | 3 | Thlaspi arvense | Tarvense | |||
| - | - | - | - | rna-TAV2_LOCUS10821,rna-TAV2_LOCUS18057,rna-TAV2_LOCUS11281,rna-TAV2_LOCUS17871,rna-TAV2_LOCUS13207,rna-TAV2_LOCUS8819,rna-TAV2_LOCUS14213,rna-TAV2_LOCUS15522,rna-TAV2_LOCUS15266,rna-TAV2_LOCUS5825,rna-TAV2_LOCUS23138,rna-TAV2_LOCUS3076,rna-TAV2_LOCUS16739 | 13 | 0 | Thlaspi arvense | Tarvense | |||
| TA11:rna-TAV2_LOCUS8078,rna-TAV2_LOCUS8079,rna-TAV2_LOCUS6078,rna-TAV2_LOCUS6077,rna-TAV2_LOCUS6070,rna-TAV2_LOCUS6069,rna-TAV2_LOCUS6072,rna-TAV2_LOCUS6074,rna-TAV2_LOCUS6872,rna-TAV2_LOCUS6869,rna-TAV2_LOCUS6866,rna-TAV2_LOCUS6865 | AT1G61360||AT1G61380||AT1G61500||AT1G61390||AT1G61480||AT1G61490||AT1G61610||AT1G11350||AT5G63890 | ATHDH; ATHDH (HISTIDINOL DEHYDROGENASE); histidinol dehydrogenase||CBRLK1, SD1-13, RKS2; SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase||S-locus lectin protein kinase family protein||S-locus protein kinase, putative||SD1-29; SD1-29 (S-DOMAIN-1 29); carbohydrate binding / kinase/ protein kinase | GO:0016301|kinase activity;GO:0005529|sugar binding;GO:0046777|protein amino acid autophosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0030246|carbohydrate binding;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0005886|plasma membrane;GO:0009570|chloroplast stroma;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS6336 | 13 | 1 | Thlaspi arvense | Tarvense | |||
| TA17:rna-TAV2_LOCUS18592,rna-TAV2_LOCUS21156,rna-TAV2_LOCUS21159,rna-TAV2_LOCUS21158,rna-TAV2_LOCUS21161,rna-TAV2_LOCUS21160,rna-TAV2_LOCUS21151,rna-TAV2_LOCUS21549,rna-TAV2_LOCUS21550,rna-TAV2_LOCUS21551,rna-TAV2_LOCUS21553;TA1011:rna-TAV2_LOCUS9017,rna-TAV2_LOCUS10128 | AT5G55360||AT5G55370||AT5G55350||AT5G55340||AT5G55330||AT1G34520||AT5G55320 | membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related||long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein | GO:0008415|acyltransferase activity;GO:0009579|thylakoid;GO:0005575|cellular_component;GO:0008150|biological_process | - | 13 | 2 | Thlaspi arvense | Tarvense | |||
| TA26:rna-TAV2_LOCUS13723,rna-TAV2_LOCUS12388,rna-TAV2_LOCUS13722,rna-TAV2_LOCUS13399,rna-TAV2_LOCUS13356,rna-TAV2_LOCUS13406,rna-TAV2_LOCUS13407,rna-TAV2_LOCUS13404,rna-TAV2_LOCUS13405;TA419:rna-TAV2_LOCUS12732,rna-TAV2_LOCUS12729,rna-TAV2_LOCUS12730 | AT2G24560||AT2G31550||AT2G31540||AT2G30310||AT2G30220 | carboxylesterase/ hydrolase, acting on ester bonds||GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | rna-TAV2_LOCUS6353 | 13 | 2 | Thlaspi arvense | Tarvense | |||
| TA278:rna-TAV2_LOCUS4535,rna-TAV2_LOCUS4533,rna-TAV2_LOCUS4534,rna-TAV2_LOCUS4537;TA1103:rna-TAV2_LOCUS13465,rna-TAV2_LOCUS13466 | AT2G45660||AT2G45650||AT1G24260||AT3G30260||AT4G11880||AT4G22940||AT5G60910 | AGL20, SOC1; AGL20 (AGAMOUS-LIKE 20); transcription factor||protein kinase family protein||AGL6; AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor||AGL8, FUL; AGL8 (agamous-like 8); transcription factor||SEP3, AGL9; SEP3 (SEPALLATA3); DNA binding / protein binding / transcription factor||AGL79; AGL79 (AGAMOUS-LIKE 79); DNA binding / transcription factor||AGL14; AGL14 (agamous-like 14); DNA binding / transcription factor | GO:0005515|protein binding;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0010154|fruit development;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0048437|floral organ development;GO:0009911|positive regulation of flower development;GO:0016301|kinase activity;GO:0010093|specification of floral organ identity;GO:0001708|cell fate specification;GO:0048481|ovule development;GO:0004674|protein serine/threonine kinase activity;GO:0005634|nucleus;GO:0048833|specification of floral organ number;GO:0009908|flower development;GO:0005524|ATP binding;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS4369,rna-TAV2_LOCUS5911,rna-TAV2_LOCUS20478,rna-TAV2_LOCUS23696,rna-TAV2_LOCUS17877,rna-TAV2_LOCUS3319,rna-TAV2_LOCUS8060 | 13 | 2 | Thlaspi arvense | Tarvense | |||
| TA755:rna-TAV2_LOCUS4984,rna-TAV2_LOCUS5463;TA1298:rna-TAV2_LOCUS17925,rna-TAV2_LOCUS17928;TA1057:rna-TAV2_LOCUS9942,rna-TAV2_LOCUS9501 | AT1G50170 | ATSIRB; ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B); sirohydrochlorin ferrochelatase | GO:0019354|siroheme biosynthetic process;GO:0009507|chloroplast;GO:0006979|response to oxidative stress;GO:0051266|sirohydrochlorin ferrochelatase activity | rna-TAV2_LOCUS12251,rna-TAV2_LOCUS7980,rna-TAV2_LOCUS2481,rna-TAV2_LOCUS24590,rna-TAV2_LOCUS14018,rna-TAV2_LOCUS25513,rna-TAV2_LOCUS7976 | 13 | 3 | Thlaspi arvense | Tarvense | |||
| TA300:rna-TAV2_LOCUS1262,rna-TAV2_LOCUS1263,rna-TAV2_LOCUS1264;TA536:rna-TAV2_LOCUS22803,rna-TAV2_LOCUS23951,rna-TAV2_LOCUS23950;TA340:rna-TAV2_LOCUS77,rna-TAV2_LOCUS76,rna-TAV2_LOCUS75;TA762:rna-TAV2_LOCUS5135,rna-TAV2_LOCUS5133 | AT3G44300||AT5G22300 | NIT4; NIT4 (NITRILASE 4); 3-cyanoalanine hydratase/ cyanoalanine nitrilase/ indole-3-acetonitrile nitrilase/ nitrilase/ nitrile hydratase||NIT2; NIT2 (nitrilase 2); indole-3-acetonitrile nitrilase/ indole-3-acetonitrile nitrile hydratase/ nitrilase | GO:0047558|3-cyanoalanine hydratase activity;GO:0047427|cyanoalanine nitrilase activity;GO:0018822|nitrile hydratase activity;GO:0000257|nitrilase activity;GO:0009684|indoleacetic acid biosynthetic process;GO:0046686|response to cadmium ion;GO:0009617|response to bacterium;GO:0005575|cellular_component;GO:0051410|detoxification of nitrogen compound;GO:0019499|cyanide metabolic process | rna-TAV2_LOCUS16576,rna-TAV2_LOCUS22167 | 13 | 4 | Thlaspi arvense | Tarvense | |||
| - | AT3G18400||AT3G04060||AT5G18270||AT5G61430||AT5G07680||AT5G39610||AT3G29035||AT3G15180||AT2G24430||AT5G53950 | CUC2, ANAC098; CUC2 (CUP-SHAPED COTYLEDON 2); transcription factor||ANAC038; ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38); transcription factor||ANAC100, ATNAC5; ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100); transcription factor||anac058; anac058 (Arabidopsis NAC domain containing protein 58); transcription factor||ATNAC3, ANAC059; ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3); protein heterodimerization/ transcription factor||ANAC080, ANAC079, ATNAC4; ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80); transcription factor||anac046; anac046 (Arabidopsis NAC domain containing protein 46); transcription factor||ANAC087; ANAC087; transcription factor||proteasome-related||ATNAC2, ORE1, ANAC092, ATNAC6; ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6); protein heterodimerization/ protein homodimerization/ transcription factor | GO:0042803|protein homodimerization activity;GO:0010150|leaf senescence;GO:0005488|binding;GO:0010160|formation of organ boundary;GO:0010072|primary shoot apical meristem specification;GO:0048504|regulation of timing of organ formation;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0048366|leaf development;GO:0010149|senescence;GO:0005886|plasma membrane;GO:0007275|multicellular organismal development;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus;GO:0010223|secondary shoot formation;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS10262,rna-TAV2_LOCUS26383,rna-TAV2_LOCUS2696,rna-TAV2_LOCUS9601,rna-TAV2_LOCUS19846,rna-TAV2_LOCUS5185,rna-TAV2_LOCUS20428,rna-TAV2_LOCUS23050,rna-TAV2_LOCUS7587,rna-TAV2_LOCUS11048,rna-TAV2_LOCUS14869,rna-TAV2_LOCUS21106 | 12 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G26770||AT1G69530||AT2G37640||AT2G39700||AT2G28950||AT3G55500||AT2G40610||AT5G05290||AT5G56320||AT2G03090||AT3G29030||AT5G02260 | ATEXPA2, EXP2, ATEXP2, ATHEXP ALPHA 1.12; ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)||ATEXPA16, EXP16, ATEXP16, ATHEXP ALPHA 1.7; ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)||ATEXPA5, ATEXP5, ATHEXP ALPHA 1.4, EXP5, EXPA5; EXPA5 (EXPANSIN A5)||ATEXPA3, ATEXP3, ATHEXP ALPHA 1.9, EXP3; EXP3||ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3; ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)||ATEXPA8, EXP8, ATEXP8, ATHEXP ALPHA 1.11; ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)||ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2; ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)||ATEXPA4, ATEXP4, ATHEXP ALPHA 1.6; ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)||ATEXPA9, EXP9, ATEXP9, ATHEXP ALPHA 1.10; ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)||ATEXPA14, EXP14, ATEXP14, ATHEXP ALPHA 1.5; ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)||ATEXPA6, ATEXP6, ATHEXP ALPHA 1.8; ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)||ATEXPA10, AT-EXP10, ATEXP10, ATHEXP ALPHA 1.1, EXP10; ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10); structural constituent of cell wall | GO:0006949|syncytium formation;GO:0005576|extracellular region;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0009739|response to gibberellin stimulus;GO:0005199|structural constituent of cell wall;GO:0009826|unidimensional cell growth;GO:0009505|plant-type cell wall;GO:0009828|plant-type cell wall loosening;GO:0012505|endomembrane system;GO:0010114|response to red light;GO:0009507|chloroplast | rna-TAV2_LOCUS1115,rna-TAV2_LOCUS18243,rna-TAV2_LOCUS12669,rna-TAV2_LOCUS14795,rna-TAV2_LOCUS13815,rna-TAV2_LOCUS16479,rna-TAV2_LOCUS14957,rna-TAV2_LOCUS21867,rna-TAV2_LOCUS18904,rna-TAV2_LOCUS8021,rna-TAV2_LOCUS7588,rna-TAV2_LOCUS21907 | 12 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G32840||AT5G56630||AT4G26270||AT4G29220||AT5G61580 | PFK4; PFK4 (PHOSPHOFRUCTOKINASE 4); 6-phosphofructokinase||PFK7; PFK7 (PHOSPHOFRUCTOKINASE 7); 6-phosphofructokinase||PFK6; PFK6 (PHOSPHOFRUCTOKINASE 6); 6-phosphofructokinase||PFK1; PFK1 (PHOSPHOFRUCTOKINASE 1); 6-phosphofructokinase||PFK3; PFK3 (PHOSPHOFRUCTOKINASE 3); 6-phosphofructokinase | GO:0005829|cytosol;GO:0006096|glycolysis;GO:0009507|chloroplast;GO:0005945|6-phosphofructokinase complex;GO:0005886|plasma membrane;GO:0003872|6-phosphofructokinase activity | rna-TAV2_LOCUS16494,rna-TAV2_LOCUS23462,rna-TAV2_LOCUS18601,rna-TAV2_LOCUS17378,rna-TAV2_LOCUS5813,rna-TAV2_LOCUS21072,rna-TAV2_LOCUS25262,rna-TAV2_LOCUS24237,rna-TAV2_LOCUS21079,rna-TAV2_LOCUS7869,rna-TAV2_LOCUS24432,rna-TAV2_LOCUS7822 | 12 | 0 | Thlaspi arvense | Tarvense | |||
| TA183:rna-TAV2_LOCUS5744,rna-TAV2_LOCUS5746,rna-TAV2_LOCUS7323,rna-TAV2_LOCUS8142 | AT2G02080||AT2G02070||AT2G01940||AT3G13810||AT1G55110||AT3G50700||AT1G03840||AT4G02670||AT5G03150||AT1G14580||AT5G66730 | AtIDD12; AtIDD12 (Arabidopsis thaliana Indeterminate(ID)-Domain 12); nucleic acid binding / transcription factor/ zinc ion binding||zinc finger (C2H2 type) family protein||MGP; MGP (Magpie); nucleic acid binding / protein binding / transcription factor/ zinc ion binding||JKD; JKD (JACKDAW); nucleic acid binding / protein binding / protein homodimerization/ transcription factor/ zinc ion binding||SGR5, ATIDD15; nucleic acid binding / transcription factor/ zinc ion binding||AtIDD11; AtIDD11 (Arabidopsis thaliana Indeterminate(ID)-Domain 11); nucleic acid binding / transcription factor/ zinc ion binding||AtIDD5; AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5); nucleic acid binding / transcription factor/ zinc ion binding||AtIDD7; AtIDD7 (Arabidopsis thaliana Indeterminate(ID)-Domain 7); nucleic acid binding / transcription factor/ zinc ion binding||AtIDD2; AtIDD2 (Arabidopsis thaliana Indeterminate(ID)-Domain 2); nucleic acid binding / transcription factor/ zinc ion binding||AtIDD4; AtIDD4 (Arabidopsis thaliana Indeterminate(ID)-Domain 4); transcription factor | GO:0009959|negative gravitropism;GO:0042803|protein homodimerization activity;GO:0003676|nucleic acid binding;GO:0005515|protein binding;GO:0010075|regulation of meristem growth;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0045449|regulation of transcription;GO:0048364|root development;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0051302|regulation of cell division | rna-TAV2_LOCUS10152,rna-TAV2_LOCUS1307,rna-TAV2_LOCUS17858,rna-TAV2_LOCUS1815,rna-TAV2_LOCUS19170,rna-TAV2_LOCUS19531,rna-TAV2_LOCUS3921,rna-TAV2_LOCUS6910 | 12 | 1 | Thlaspi arvense | Tarvense | |||
| TA34:rna-TAV2_LOCUS1622,rna-TAV2_LOCUS144,rna-TAV2_LOCUS137,rna-TAV2_LOCUS138,rna-TAV2_LOCUS140,rna-TAV2_LOCUS141,rna-TAV2_LOCUS142,rna-TAV2_LOCUS143 | AT1G48660||AT5G51470||AT1G23160||AT1G48670 | auxin-responsive GH3 family protein | GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0003674|molecular_function | rna-TAV2_LOCUS1101,rna-TAV2_LOCUS3160,rna-TAV2_LOCUS2782,rna-TAV2_LOCUS2783 | 12 | 1 | Thlaspi arvense | Tarvense | |||
| TA426:rna-TAV2_LOCUS13242,rna-TAV2_LOCUS13241,rna-TAV2_LOCUS12944 | AT5G09810||AT3G12110||AT3G46520||AT3G18780||AT2G37620 | ACT1, AAc1; ACT1 (ACTIN 1); structural constituent of cytoskeleton||ACT11; ACT11 (actin-11); structural constituent of cytoskeleton||ACT2, ACT7; ACT7 (ACTIN 7); structural constituent of cytoskeleton||ACT12; ACT12 (ACTIN-12); structural constituent of cytoskeleton||ACT2, DER1, LSR2, ENL2; ACT2 (ACTIN 2); structural constituent of cytoskeleton | GO:0005515|protein binding;GO:0009735|response to cytokinin stimulus;GO:0009733|response to auxin stimulus;GO:0048364|root development;GO:0009644|response to high light intensity;GO:0005886|plasma membrane;GO:0051301|cell division;GO:0048767|root hair elongation;GO:0005737|cytoplasm;GO:0005618|cell wall;GO:0005856|cytoskeleton;GO:0009416|response to light stimulus;GO:0009611|response to wounding;GO:0007010|cytoskeleton organization;GO:0010218|response to far red light;GO:0016020|membrane;GO:0048768|root hair cell tip growth;GO:0005730|nucleolus;GO:0010053|root epidermal cell differentiation;GO:0030036|actin cytoskeleton organization;GO:0005634|nucleus;GO:0005200|structural constituent of cytoskeleton;GO:0048589|developmental growth;GO:0010583|response to cyclopentenone;GO:0009845|seed germination;GO:0010114|response to red light;GO:0005739|mitochondrion | rna-TAV2_LOCUS1151,rna-TAV2_LOCUS22228,rna-TAV2_LOCUS2828,rna-TAV2_LOCUS9671,rna-TAV2_LOCUS17770,rna-TAV2_LOCUS15570,rna-TAV2_LOCUS9890,rna-TAV2_LOCUS21129,rna-TAV2_LOCUS18327 | 12 | 1 | Thlaspi arvense | Tarvense | |||
| TA65:rna-TAV2_LOCUS21061,rna-TAV2_LOCUS21060,rna-TAV2_LOCUS18546,rna-TAV2_LOCUS18545,rna-TAV2_LOCUS18606,rna-TAV2_LOCUS19372,rna-TAV2_LOCUS18605;TA237:rna-TAV2_LOCUS17935,rna-TAV2_LOCUS15862,rna-TAV2_LOCUS17937,rna-TAV2_LOCUS18053 | AT5G51950||AT3G56060||AT5G51930 | glucose-methanol-choline (GMC) oxidoreductase family protein | GO:0016832|aldehyde-lyase activity;GO:0016491|oxidoreductase activity;GO:0016614|oxidoreductase activity, acting on CH-OH group of donors;GO:0012505|endomembrane system;GO:0050660|FAD binding;GO:0006066|alcohol metabolic process | rna-TAV2_LOCUS17936 | 12 | 2 | Thlaspi arvense | Tarvense | |||
| TA516:rna-TAV2_LOCUS21258,rna-TAV2_LOCUS21254,rna-TAV2_LOCUS19753;TA1613:rna-TAV2_LOCUS25391,rna-TAV2_LOCUS25392;TA1498:rna-TAV2_LOCUS22739,rna-TAV2_LOCUS25879 | AT4G04720||AT4G04710||AT4G21940||AT5G10010||AT4G23650||AT5G12180||AT3G20410||AT5G19360 | CPK21; CPK21; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CDPK6, CPK3; CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK9; CPK9 (calmodulin-domain protein kinase 9); calmodulin-dependent protein kinase/ kinase||CPK34; CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK17; CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||unknown protein||CPK22; CPK22; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK15; CPK15; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0009738|abscisic acid mediated signaling pathway;GO:0005737|cytoplasm;GO:0016301|kinase activity;GO:0005730|nucleolus;GO:0004674|protein serine/threonine kinase activity;GO:0010359|regulation of anion channel activity;GO:0010119|regulation of stomatal movement;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0004683|calmodulin-dependent protein kinase activity | rna-TAV2_LOCUS20387,rna-TAV2_LOCUS11661,rna-TAV2_LOCUS24379,rna-TAV2_LOCUS18677,rna-TAV2_LOCUS19718 | 12 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT3G23310||AT4G14350||AT1G03920||AT1G04440||AT5G43320||AT4G14340||AT2G19470||AT5G03470||AT5G44100||AT2G20470||AT1G30640 | protein kinase, putative||CKI1, CKL11; CKI1 (CASEIN KINASE I); kinase/ protein serine/threonine kinase||ckl5; ckl5 (Casein Kinase I-like 5); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||protein kinase family protein||ckl7; ckl7 (Casein Kinase I-like 7); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ATB' ALPHA; ATB' ALPHA; protein phosphatase type 2A regulator||kinase||CKL13; CKL13 (CASEIN KINASE LIKE 13); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ckl8; ckl8 (Casein Kinase I-like 8); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0008601|protein phosphatase type 2A regulator activity;GO:0016301|kinase activity;GO:0005829|cytosol;GO:0016310|phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0009524|phragmoplast;GO:0042325|regulation of phosphorylation;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0005634|nucleus;GO:0004672|protein kinase activity;GO:0000159|protein phosphatase type 2A complex | rna-TAV2_LOCUS10244,rna-TAV2_LOCUS23635,rna-TAV2_LOCUS3366,rna-TAV2_LOCUS1590,rna-TAV2_LOCUS5219,rna-TAV2_LOCUS24520,rna-TAV2_LOCUS8949,rna-TAV2_LOCUS21666,rna-TAV2_LOCUS7163,rna-TAV2_LOCUS9457,rna-TAV2_LOCUS2749 | 11 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G17290||AT4G35310||AT3G10660||AT5G04870||AT4G09570||AT1G35670||AT2G38910||AT2G35890 | CPK4, ATCPK4; CPK4; calmodulin-dependent protein kinase/ kinase/ protein kinase||CPK25; CPK25; ATP binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK20; CPK20; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK6, ATCDPK3; CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase||CPK1, ATCPK1; CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1); calmodulin-dependent protein kinase/ kinase||CPK2, ATCPK2; CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase||ATCDPK2, CPK11, ATCPK11; ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2); calmodulin-dependent protein kinase/ kinase||CPK5, ATCPK5; CPK5 (calmodulin-domain protein kinase 5); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase | GO:0005829|cytosol;GO:0005515|protein binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding;GO:0009738|abscisic acid mediated signaling pathway;GO:0005789|endoplasmic reticulum membrane;GO:0016301|kinase activity;GO:0016020|membrane;GO:0004674|protein serine/threonine kinase activity;GO:0010359|regulation of anion channel activity;GO:0005777|peroxisome;GO:0010119|regulation of stomatal movement;GO:0005524|ATP binding;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0005575|cellular_component;GO:0004683|calmodulin-dependent protein kinase activity | rna-TAV2_LOCUS10299,rna-TAV2_LOCUS22622,rna-TAV2_LOCUS11465,rna-TAV2_LOCUS20061,rna-TAV2_LOCUS12245,rna-TAV2_LOCUS19875,rna-TAV2_LOCUS2009,rna-TAV2_LOCUS12246,rna-TAV2_LOCUS8466,rna-TAV2_LOCUS13179,rna-TAV2_LOCUS13164 | 11 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G52950 | replication protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS10774,rna-TAV2_LOCUS477,rna-TAV2_LOCUS19434,rna-TAV2_LOCUS6807,rna-TAV2_LOCUS11301,rna-TAV2_LOCUS6085,rna-TAV2_LOCUS13532,rna-TAV2_LOCUS25563,rna-TAV2_LOCUS14494,rna-TAV2_LOCUS24863,rna-TAV2_LOCUS9720 | 11 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G40595 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS11179,rna-TAV2_LOCUS18847,rna-TAV2_LOCUS14278,rna-TAV2_LOCUS13531,rna-TAV2_LOCUS24672,rna-TAV2_LOCUS13808,rna-TAV2_LOCUS12452,rna-TAV2_LOCUS23354,rna-TAV2_LOCUS1122,rna-TAV2_LOCUS8846,rna-TAV2_LOCUS18848 | 11 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G17800||AT1G20090||AT1G75840||AT2G44690||AT5G45970||AT3G51300||AT5G62880||AT4G28950||AT4G35020 | ARAC10, ATRAC10, ATROP11; ARAC10; GTP binding||ARAC5, ATGP3, ROP4, ATROP4; ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase||ARAC7, ATROP9, ATRAC7, RAC7, ROP9; ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding||ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1; ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding||ARAC9, ATROP8, ROP8; ARAC9; GTP binding||ARAC4, ROP2, ATROP2, ATRAC4; ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding||ARAC2, ROP7, ATRAC2, ATROP7; ARAC2 (ARABIDOPSIS RAC-LIKE 2); GTP binding||ARAC3, ROP6, RHO1PS, ATROP6; ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase||ARAC1, ATGP2, ATRAC1, ROP3, ATROP3; ARAC1; GTP binding | GO:0005515|protein binding;GO:0009860|pollen tube growth;GO:0005525|GTP binding;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0030834|regulation of actin filament depolymerization;GO:0030833|regulation of actin filament polymerization;GO:0005819|spindle;GO:0009738|abscisic acid mediated signaling pathway;GO:0000226|microtubule cytoskeleton organization;GO:0000902|cell morphogenesis;GO:0017157|regulation of exocytosis;GO:0005737|cytoplasm;GO:0045177|apical part of cell;GO:0009416|response to light stimulus;GO:0032794|GTPase activating protein binding;GO:0051650|establishment of vesicle localization;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0005622|intracellular;GO:0005634|nucleus;GO:0009734|auxin mediated signaling pathway;GO:0003924|GTPase activity;GO:0010119|regulation of stomatal movement;GO:0040007|growth | rna-TAV2_LOCUS11760,rna-TAV2_LOCUS24556,rna-TAV2_LOCUS124,rna-TAV2_LOCUS18069,rna-TAV2_LOCUS14065,rna-TAV2_LOCUS5327,rna-TAV2_LOCUS15713,rna-TAV2_LOCUS8455,rna-TAV2_LOCUS7351,rna-TAV2_LOCUS23095,rna-TAV2_LOCUS25713 | 11 | 0 | Thlaspi arvense | Tarvense | |||
| TA175:rna-TAV2_LOCUS2443,rna-TAV2_LOCUS3999,rna-TAV2_LOCUS4002,rna-TAV2_LOCUS4001 | AT1G23870||AT1G23880||AT1G23890||AT1G23900||AT1G70280||AT1G70290||AT1G60140||AT1G60070 | ATTPS8, TPS8, ATTPSC; ATTPS8; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups / trehalose-phosphatase||NHL repeat-containing protein||binding / clathrin binding / protein binding / protein transporter||ATTPS10, TPS10; ATTPS10 (trehalose phosphate synthase); transferase, transferring glycosyl groups / trehalose-phosphatase||ATTPS9, TPS9; ATTPS9; transferase, transferring glycosyl groups / trehalose-phosphatase||GAMMA-ADAPTIN 1, Gamma-ADR; GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); binding / clathrin binding / protein binding / protein transporter | GO:0003674|molecular_function;GO:0005515|protein binding;GO:0006886|intracellular protein transport;GO:0004805|trehalose-phosphatase activity;GO:0012505|endomembrane system;GO:0030121|AP-1 adaptor complex;GO:0015031|protein transport;GO:0008150|biological_process;GO:0044431|Golgi apparatus part;GO:0005992|trehalose biosynthetic process;GO:0030131|clathrin adaptor complex;GO:0030117|membrane coat;GO:0016192|vesicle-mediated transport;GO:0008152|metabolic process;GO:0008565|protein transporter activity;GO:0005488|binding;GO:0016757|transferase activity, transferring glycosyl groups;GO:0030276|clathrin binding;GO:0005575|cellular_component;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS15585,rna-TAV2_LOCUS15588,rna-TAV2_LOCUS5573,rna-TAV2_LOCUS2445,rna-TAV2_LOCUS6744,rna-TAV2_LOCUS4306,rna-TAV2_LOCUS4308 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA22:rna-TAV2_LOCUS16524,rna-TAV2_LOCUS16525,rna-TAV2_LOCUS16526,rna-TAV2_LOCUS16431,rna-TAV2_LOCUS16427,rna-TAV2_LOCUS16428,rna-TAV2_LOCUS16429,rna-TAV2_LOCUS16422,rna-TAV2_LOCUS16423,rna-TAV2_LOCUS16425 | AT3G57760||AT3G57750||AT3G57740||AT3G57710||AT3G57730||AT3G57700||AT3G57720 | protein kinase, putative||protein kinase family protein | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS10348 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA24:rna-TAV2_LOCUS2934,rna-TAV2_LOCUS2935,rna-TAV2_LOCUS2932,rna-TAV2_LOCUS2933,rna-TAV2_LOCUS2936,rna-TAV2_LOCUS2940,rna-TAV2_LOCUS2941,rna-TAV2_LOCUS2472,rna-TAV2_LOCUS2471 | AT1G29720||AT2G19130||AT1G29730||AT1G29740||AT1G29750 | ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||protein kinase family protein||S-locus lectin protein kinase family protein||RKF1; RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase||kinase | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0004702|receptor signaling protein serine/threonine kinase activity;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS11030,rna-TAV2_LOCUS7712 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA29:rna-TAV2_LOCUS19406,rna-TAV2_LOCUS19403,rna-TAV2_LOCUS19404,rna-TAV2_LOCUS19401,rna-TAV2_LOCUS19402,rna-TAV2_LOCUS21922,rna-TAV2_LOCUS21921,rna-TAV2_LOCUS21923,rna-TAV2_LOCUS21918 | AT4G38940 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS14947,rna-TAV2_LOCUS8070 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA30:rna-TAV2_LOCUS20907,rna-TAV2_LOCUS20909,rna-TAV2_LOCUS20910,rna-TAV2_LOCUS20326,rna-TAV2_LOCUS20328,rna-TAV2_LOCUS20330,rna-TAV2_LOCUS20329,rna-TAV2_LOCUS20331,rna-TAV2_LOCUS20334 | AT4G12500||AT4G12480||AT4G12510||AT4G12530||AT4G22460||AT4G12550 | pEARLI 1; pEARLI 1; lipid binding||protease inhibitor/seed storage/lipid transfer protein (LTP) family protein||AIR1; AIR1; lipid binding | GO:0009733|response to auxin stimulus;GO:0008289|lipid binding;GO:0010102|lateral root morphogenesis;GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0050832|defense response to fungus | rna-TAV2_LOCUS20327,rna-TAV2_LOCUS7838 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA35:rna-TAV2_LOCUS1686,rna-TAV2_LOCUS3215,rna-TAV2_LOCUS3214,rna-TAV2_LOCUS3210,rna-TAV2_LOCUS3213,rna-TAV2_LOCUS3212,rna-TAV2_LOCUS1750,rna-TAV2_LOCUS1755 | AT1G11410||AT1G11340||AT1G11330||AT1G11300||AT1G11280||AT1G61360||AT1G11270 | S-locus lectin protein kinase family protein||ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||S-locus protein kinase, putative||F-box family protein | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0003674|molecular_function;GO:0010286|heat acclimation;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS3196,rna-TAV2_LOCUS7025,rna-TAV2_LOCUS265 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA45:rna-TAV2_LOCUS18124,rna-TAV2_LOCUS17352,rna-TAV2_LOCUS17348,rna-TAV2_LOCUS17350,rna-TAV2_LOCUS17351,rna-TAV2_LOCUS15329,rna-TAV2_LOCUS15324,rna-TAV2_LOCUS15323 | AT1G66880||AT1G66920||AT1G66910||AT1G66930||AT1G66980||AT4G26690||AT1G25390 | protein kinase, putative||protein kinase family protein||serine/threonine protein kinase family protein||SHV3, MRH5, GPDL2; SHV3 (SHAVEN 3); glycerophosphodiester phosphodiesterase/ kinase||protein kinase family protein / glycerophosphoryl diester phosphodiesterase family protein||serine/threonine protein kinase, putative | GO:0016301|kinase activity;GO:0046658|anchored to plasma membrane;GO:0004674|protein serine/threonine kinase activity;GO:0006071|glycerol metabolic process;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0009505|plant-type cell wall;GO:0006468|protein amino acid phosphorylation;GO:0006629|lipid metabolic process;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0008889|glycerophosphodiester phosphodiesterase activity | rna-TAV2_LOCUS8461,rna-TAV2_LOCUS24699,rna-TAV2_LOCUS21271 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA54:rna-TAV2_LOCUS554,rna-TAV2_LOCUS2795,rna-TAV2_LOCUS565,rna-TAV2_LOCUS253,rna-TAV2_LOCUS254,rna-TAV2_LOCUS255,rna-TAV2_LOCUS257 | AT1G29080||AT1G29090 | peptidase C1A papain family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis | rna-TAV2_LOCUS21915,rna-TAV2_LOCUS25248,rna-TAV2_LOCUS5210,rna-TAV2_LOCUS9296 | 11 | 1 | Thlaspi arvense | Tarvense | |||
| TA48:rna-TAV2_LOCUS22075,rna-TAV2_LOCUS22073,rna-TAV2_LOCUS20335,rna-TAV2_LOCUS18779,rna-TAV2_LOCUS18777,rna-TAV2_LOCUS18774,rna-TAV2_LOCUS18772,rna-TAV2_LOCUS21261;TA526:rna-TAV2_LOCUS22074,rna-TAV2_LOCUS22071,rna-TAV2_LOCUS20336 | AT4G04540||AT4G04570||AT4G04510||AT4G04500||AT4G04490 | protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 11 | 2 | Thlaspi arvense | Tarvense | |||
| TA50:rna-TAV2_LOCUS24891,rna-TAV2_LOCUS24890,rna-TAV2_LOCUS24889,rna-TAV2_LOCUS24887,rna-TAV2_LOCUS24886,rna-TAV2_LOCUS24885,rna-TAV2_LOCUS24884,rna-TAV2_LOCUS24883;TA1534:rna-TAV2_LOCUS23532,rna-TAV2_LOCUS23535 | AT4G37430||AT4G37410||AT4G37400||AT4G37370||AT4G37330||AT4G37320||AT4G37310||AT5G57220 | CYP81D8; CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D4; CYP81D4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81F4; CYP81F4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP91A2, CYP81F1; CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81H1; CYP81H1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81F3; CYP81F3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D5; CYP81D5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81F2; CYP81F2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0042742|defense response to bacterium;GO:0052544|callose deposition in cell wall during defense response;GO:0019760|glucosinolate metabolic process;GO:0005506|iron ion binding;GO:0002213|defense response to insect;GO:0004497|monooxygenase activity;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0009759|indole glucosinolate biosynthetic process;GO:0042343|indole glucosinolate metabolic process;GO:0009055|electron carrier activity;GO:0050832|defense response to fungus | rna-TAV2_LOCUS19728 | 11 | 2 | Thlaspi arvense | Tarvense | |||
| TA68:rna-TAV2_LOCUS23617,rna-TAV2_LOCUS23616,rna-TAV2_LOCUS23611,rna-TAV2_LOCUS23610,rna-TAV2_LOCUS24090,rna-TAV2_LOCUS24091,rna-TAV2_LOCUS24088;TA172:rna-TAV2_LOCUS1944,rna-TAV2_LOCUS2963,rna-TAV2_LOCUS1947,rna-TAV2_LOCUS1946 | AT4G19530||AT4G19520||AT4G19510||AT4G19500||AT4G19490||AT1G27170||AT1G27180 | ATP binding / protein binding / transmembrane receptor||disease resistance protein (TIR-NBS-LRR class), putative||ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor||ATVPS54, VPS54; protein binding | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0005515|protein binding;GO:0042147|retrograde transport, endosome to Golgi;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0009507|chloroplast;GO:0006952|defense response | - | 11 | 2 | Thlaspi arvense | Tarvense | |||
| TA84:rna-TAV2_LOCUS12776,rna-TAV2_LOCUS12775,rna-TAV2_LOCUS12774,rna-TAV2_LOCUS12773,rna-TAV2_LOCUS12772,rna-TAV2_LOCUS13201;TA1609:rna-TAV2_LOCUS25293,rna-TAV2_LOCUS23958 | AT5G26000||AT5G25980 | TGG2, BGLU37; TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase||TGG1, BGLU38; TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | GO:0005773|vacuole;GO:0019137|thioglucosidase activity;GO:0005777|peroxisome;GO:0008422|beta-glucosidase activity;GO:0009505|plant-type cell wall;GO:0048046|apoplast;GO:0022626|cytosolic ribosome;GO:0009579|thylakoid;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009507|chloroplast;GO:0019762|glucosinolate catabolic process | rna-TAV2_LOCUS12474,rna-TAV2_LOCUS3697,rna-TAV2_LOCUS25289 | 11 | 2 | Thlaspi arvense | Tarvense | |||
| TA91:rna-TAV2_LOCUS17081,rna-TAV2_LOCUS17082,rna-TAV2_LOCUS17089,rna-TAV2_LOCUS17087,rna-TAV2_LOCUS17085,rna-TAV2_LOCUS17086;TA182:rna-TAV2_LOCUS5500,rna-TAV2_LOCUS5499,rna-TAV2_LOCUS5804,rna-TAV2_LOCUS5803 | AT3G47790||AT3G47740||AT3G47760||AT3G47730||AT5G61740||AT5G61730||AT5G61690||AT5G61700 | ATATH7, ATH7; ATATH7; ATPase, coupled to transmembrane movement of substances / transporter||ATATH11, ATH11; ATATH11; ATPase, coupled to transmembrane movement of substances / transporter||ATATH1, ATH1; ATATH1; ATPase, coupled to transmembrane movement of substances / transporter||ATATH15, ATH15; ATATH15; ATPase, coupled to transmembrane movement of substances / transporter||ATATH14, ATH14; ATATH14; ATPase, coupled to transmembrane movement of substances / transporter||ATATH2, ATH2; ATATH2; ATPase, coupled to transmembrane movement of substances / transporter||ATATH4, ATH4; ATATH4; ATPase, coupled to transmembrane movement of substances / transporter||ATATH16, ATH16; ATATH16; ATPase, coupled to transmembrane movement of substances / transporter | GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion | rna-TAV2_LOCUS9122 | 11 | 2 | Thlaspi arvense | Tarvense | |||
| TA235:rna-TAV2_LOCUS17212,rna-TAV2_LOCUS17213,rna-TAV2_LOCUS18007,rna-TAV2_LOCUS17210;TA1572:rna-TAV2_LOCUS24371,rna-TAV2_LOCUS24377;TA1461:rna-TAV2_LOCUS21499,rna-TAV2_LOCUS21500 | AT1G45063 | copper ion binding / electron carrier | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0009055|electron carrier activity | rna-TAV2_LOCUS1644,rna-TAV2_LOCUS19480,rna-TAV2_LOCUS24837 | 11 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT2G30980||AT4G18710||AT4G00720||AT3G61160||AT3G05840||AT5G14640||AT5G26751||AT1G06390 | ASKdZeta, ATSK23, BIL1, ATSK2-2; ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||GSK1, ATGSK1, ATSK22, SK22, BIL2, ATSK2-3; GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); glycogen synthase kinase 3/ kinase||ATSK32; ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||BIN2, DWF12, UCU1, ATSK21, SK21; BIN2 (BRASSINOSTEROID-INSENSITIVE 2); glycogen synthase kinase 3/ kinase/ protein kinase||shaggy-related protein kinase beta / ASK-beta (ASK2)||ATSK11, SK 11; ATSK11; protein kinase/ protein serine/threonine kinase||ATSK13, SK13; SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase||ATSK12; ATSK12; protein kinase/ protein serine/threonine kinase | GO:0005829|cytosol;GO:0009733|response to auxin stimulus;GO:0009965|leaf morphogenesis;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0046827|positive regulation of protein export from nucleus;GO:0006972|hyperosmotic response;GO:0009825|multidimensional cell growth;GO:0009729|detection of brassinosteroid stimulus;GO:0004696|glycogen synthase kinase 3 activity;GO:0009741|response to brassinosteroid stimulus;GO:0009933|meristem structural organization;GO:0016301|kinase activity;GO:0016310|phosphorylation;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0004674|protein serine/threonine kinase activity;GO:0032880|regulation of protein localization;GO:0042538|hyperosmotic salinity response;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS13221,rna-TAV2_LOCUS24718,rna-TAV2_LOCUS18996,rna-TAV2_LOCUS14177,rna-TAV2_LOCUS16848,rna-TAV2_LOCUS9998,rna-TAV2_LOCUS19595,rna-TAV2_LOCUS7305,rna-TAV2_LOCUS3479,rna-TAV2_LOCUS181 | 10 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G31150||AT2G07240 | cysteine-type peptidase||transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0006508|proteolysis | rna-TAV2_LOCUS13416,rna-TAV2_LOCUS2768,rna-TAV2_LOCUS14387,rna-TAV2_LOCUS2113,rna-TAV2_LOCUS13653,rna-TAV2_LOCUS2580,rna-TAV2_LOCUS1548,rna-TAV2_LOCUS5579,rna-TAV2_LOCUS8786,rna-TAV2_LOCUS2112 | 10 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G22610||AT1G72250 | kinesin motor protein-related | GO:0005524|ATP binding;GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0003777|microtubule motor activity | rna-TAV2_LOCUS14060,rna-TAV2_LOCUS18422,rna-TAV2_LOCUS16798,rna-TAV2_LOCUS5158,rna-TAV2_LOCUS5716,rna-TAV2_LOCUS9384,rna-TAV2_LOCUS9390,rna-TAV2_LOCUS5723,rna-TAV2_LOCUS6624,rna-TAV2_LOCUS7136 | 10 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G32390||AT5G56010||AT5G57440||AT5G52640 | HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90.1; ATHSP90.1 (HEAT SHOCK PROTEIN 90.1); ATP binding / unfolded protein binding||HSP81-3; HSP81-3; ATP binding / unfolded protein binding||GS1, GPP2; GS1; catalytic/ hydrolase||phosphate translocator-related | GO:0051082|unfolded protein binding;GO:0042742|defense response to bacterium;GO:0046685|response to arsenic;GO:0005829|cytosol;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0005730|nucleolus;GO:0008514|organic anion transmembrane transporter activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0009408|response to heat;GO:0006457|protein folding;GO:0008152|metabolic process;GO:0005618|cell wall | rna-TAV2_LOCUS14229,rna-TAV2_LOCUS22611,rna-TAV2_LOCUS18994,rna-TAV2_LOCUS25639,rna-TAV2_LOCUS20660,rna-TAV2_LOCUS25829,rna-TAV2_LOCUS19794,rna-TAV2_LOCUS20933,rna-TAV2_LOCUS26096,rna-TAV2_LOCUS9788 | 10 | 0 | Thlaspi arvense | Tarvense | |||
| TA1168:rna-TAV2_LOCUS14862,rna-TAV2_LOCUS14861 | AT2G37180||AT2G37170||AT3G61430||AT2G39010||AT3G53420||AT5G60660||AT3G54820||AT4G35100||AT4G00430 | PIP2F, PIP2;4; PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel||PIP2B, PIP2;2; PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel||PIP2D, PIP2;5; PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel||PIP3, PIP3A, PIP2;7, SIMIP; PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3); water channel||TMP-C, PIP1;4, PIP1E; PIP1;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;4); water channel||PIP2E, PIP2;6; PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E); water channel||PIP2A, PIP2, PIP2;1; PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel||RD28, PIP2;3, PIP2C; RD28 (RESPONSIVE TO DESICCATION 28); water channel||PIP1A, ATPIP1, PIP1, PIP1;1; PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel | GO:0005773|vacuole;GO:0016020|membrane;GO:0046658|anchored to plasma membrane;GO:0006970|response to osmotic stress;GO:0009941|chloroplast envelope;GO:0006833|water transport;GO:0009269|response to desiccation;GO:0005886|plasma membrane;GO:0015250|water channel activity;GO:0009651|response to salt stress;GO:0016021|integral to membrane;GO:0009414|response to water deprivation;GO:0006810|transport;GO:0009624|response to nematode;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS12390,rna-TAV2_LOCUS14216,rna-TAV2_LOCUS16419,rna-TAV2_LOCUS20560,rna-TAV2_LOCUS16621,rna-TAV2_LOCUS23540,rna-TAV2_LOCUS18235,rna-TAV2_LOCUS20751 | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA19:rna-TAV2_LOCUS11580,rna-TAV2_LOCUS11578,rna-TAV2_LOCUS11579,rna-TAV2_LOCUS11577,rna-TAV2_LOCUS11575,rna-TAV2_LOCUS11576,rna-TAV2_LOCUS10425,rna-TAV2_LOCUS10424,rna-TAV2_LOCUS10427,rna-TAV2_LOCUS10426 | AT5G47550 | cysteine protease inhibitor, putative / cystatin, putative | GO:0005618|cell wall;GO:0004869|cysteine-type endopeptidase inhibitor activity;GO:0008150|biological_process | - | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA20:rna-TAV2_LOCUS9459,rna-TAV2_LOCUS9465,rna-TAV2_LOCUS9464,rna-TAV2_LOCUS9463,rna-TAV2_LOCUS9468,rna-TAV2_LOCUS9467,rna-TAV2_LOCUS10615,rna-TAV2_LOCUS10616,rna-TAV2_LOCUS10617,rna-TAV2_LOCUS10618 | AT2G17690||AT1G65770||AT1G65740 | SDC; SDC (SUPPRESSOR OF DRM1 DRM2 CMT3)||AMR1; F-box family protein||F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA23:rna-TAV2_LOCUS23329,rna-TAV2_LOCUS23332,rna-TAV2_LOCUS23906,rna-TAV2_LOCUS23909,rna-TAV2_LOCUS22677,rna-TAV2_LOCUS22527,rna-TAV2_LOCUS22526,rna-TAV2_LOCUS22522,rna-TAV2_LOCUS23425,rna-TAV2_LOCUS23421 | AT4G15715||AT4G15710 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56920.1); Has 26 Blast hits to 26 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA32:rna-TAV2_LOCUS22634,rna-TAV2_LOCUS26022,rna-TAV2_LOCUS24941,rna-TAV2_LOCUS25403,rna-TAV2_LOCUS25230,rna-TAV2_LOCUS22927,rna-TAV2_LOCUS22928,rna-TAV2_LOCUS22926,rna-TAV2_LOCUS25231 | AT3G29635||AT5G39050||AT5G39090 | transferase/ transferase, transferring acyl groups other than amino-acyl groups||transferase family protein | GO:0016740|transferase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS25775 | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA49:rna-TAV2_LOCUS24753,rna-TAV2_LOCUS23331,rna-TAV2_LOCUS23335,rna-TAV2_LOCUS23334,rna-TAV2_LOCUS23908,rna-TAV2_LOCUS23911,rna-TAV2_LOCUS23477,rna-TAV2_LOCUS24809 | - | - | - | rna-TAV2_LOCUS25822,rna-TAV2_LOCUS7879 | 10 | 1 | Thlaspi arvense | Tarvense | |||
| TA146:rna-TAV2_LOCUS20188,rna-TAV2_LOCUS21280,rna-TAV2_LOCUS21279,rna-TAV2_LOCUS21282,rna-TAV2_LOCUS21281;TA232:rna-TAV2_LOCUS16574,rna-TAV2_LOCUS17714,rna-TAV2_LOCUS17721,rna-TAV2_LOCUS17723 | AT5G60320||AT5G60300||AT5G60280||AT5G60270||AT3G45440||AT3G45430||AT3G45410||AT3G45330 | lectin protein kinase family protein | GO:0016301|kinase activity;GO:0005515|protein binding;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0048041|focal adhesion assembly | rna-TAV2_LOCUS16575 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA1479:rna-TAV2_LOCUS21988,rna-TAV2_LOCUS21035;TA1703:rna-TAV2_LOCUS8662,rna-TAV2_LOCUS8664 | AT4G05320||AT4G05050||AT5G03240||AT1G31340||AT5G20620||AT2G35635 | UBQ7, RUB2; UBQ7; protein binding||UBQ3; UBQ3 (POLYUBIQUITIN 3); protein binding||UBQ10; UBQ10 (POLYUBIQUITIN 10); protein binding||RUB1, NEDD8, ATRUB1; RUB1 (RELATED TO UBIQUITIN 1); protein binding||UBQ4; UBQ4; protein binding||UBQ11; UBQ11 (UBIQUITIN 11); protein binding | GO:0005773|vacuole;GO:0009751|response to salicylic acid stimulus;GO:0042787|protein ubiquitination during ubiquitin-dependent protein catabolic process;GO:0010224|response to UV-B;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009733|response to auxin stimulus;GO:0005622|intracellular;GO:0007568|aging;GO:0005886|plasma membrane;GO:0045116|protein neddylation;GO:0006464|protein modification process | rna-TAV2_LOCUS11932,rna-TAV2_LOCUS13493,rna-TAV2_LOCUS17271,rna-TAV2_LOCUS562,rna-TAV2_LOCUS24558,rna-TAV2_LOCUS2872 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA170:rna-TAV2_LOCUS1463,rna-TAV2_LOCUS1462,rna-TAV2_LOCUS1461,rna-TAV2_LOCUS3962;TA504:rna-TAV2_LOCUS20051,rna-TAV2_LOCUS20050,rna-TAV2_LOCUS22137 | AT1G32940||AT1G32950||AT1G32970||AT4G10510||AT4G10540||AT4G10530||AT1G32960 | ATSBT3.5, SBT3.5; SBT3.5; identical protein binding / serine-type endopeptidase||ATSBT3.3, SBT3.3; SBT3.3; identical protein binding / serine-type endopeptidase||subtilase family protein | GO:0043086|negative regulation of catalytic activity;GO:0009505|plant-type cell wall;GO:0004252|serine-type endopeptidase activity;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0042802|identical protein binding | rna-TAV2_LOCUS20635,rna-TAV2_LOCUS23321,rna-TAV2_LOCUS20637 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA186:rna-TAV2_LOCUS6096,rna-TAV2_LOCUS8103,rna-TAV2_LOCUS8107,rna-TAV2_LOCUS8106;TA239:rna-TAV2_LOCUS18252,rna-TAV2_LOCUS16182,rna-TAV2_LOCUS16183,rna-TAV2_LOCUS16178 | AT3G47090||AT3G47570||AT5G06905||AT3G47580 | leucine-rich repeat transmembrane protein kinase, putative||CYP712A2; CYP712A2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0019825|oxygen binding;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity | rna-TAV2_LOCUS17374,rna-TAV2_LOCUS22199 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA440:rna-TAV2_LOCUS14327,rna-TAV2_LOCUS14328,rna-TAV2_LOCUS14329;TA540:rna-TAV2_LOCUS23079,rna-TAV2_LOCUS23078,rna-TAV2_LOCUS23077 | AT2G23190||AT2G23180||AT4G39480||AT4G39490||AT1G47620||AT3G28740 | CYP81D1; CYP81D1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A9; CYP96A9 (CYTOCHROME P450 96 A9); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A1; CYP96A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D7; CYP81D7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A8; CYP96A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP96A10; CYP96A10; electron carrier/ heme binding / iron ion binding / monooxygenase | GO:0005506|iron ion binding;GO:0002213|defense response to insect;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | rna-TAV2_LOCUS18071,rna-TAV2_LOCUS6851,rna-TAV2_LOCUS22756,rna-TAV2_LOCUS22757 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA787:rna-TAV2_LOCUS5771,rna-TAV2_LOCUS5778;TA1578:rna-TAV2_LOCUS24498,rna-TAV2_LOCUS24497 | AT1G09200||AT4G40040||AT5G05060 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05040.1); Has 40 Blast hits to 40 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||histone H3||histone H3.2 | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006334|nucleosome assembly;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0000786|nucleosome;GO:0003677|DNA binding | rna-TAV2_LOCUS11422,rna-TAV2_LOCUS18110,rna-TAV2_LOCUS18870,rna-TAV2_LOCUS20921,rna-TAV2_LOCUS21888,rna-TAV2_LOCUS26324 | 10 | 2 | Thlaspi arvense | Tarvense | |||
| TA468:rna-TAV2_LOCUS17166,rna-TAV2_LOCUS17164,rna-TAV2_LOCUS17169;TA633:rna-TAV2_LOCUS1510,rna-TAV2_LOCUS1513;TA1266:rna-TAV2_LOCUS17165,rna-TAV2_LOCUS17163 | AT3G60790||AT3G60780||AT2G45360 | unknown protein||F-box protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS10562,rna-TAV2_LOCUS12850,rna-TAV2_LOCUS6373 | 10 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT2G07560||AT3G42640||AT2G18960||AT4G30190||AT2G24520||AT1G80660||AT5G57350||AT5G62670 | AHA2, PMA2; AHA2; ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism||AHA9; AHA9; hydrogen-exporting ATPase, phosphorylative mechanism||AHA11; AHA11 (Arabidopsis H(+)-ATPase 11); ATPase||AHA3, ATAHA3; AHA3; ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism||AHA8; AHA8 (Arabidopsis H(+)-ATPase 8); ATPase||AHA5; AHA5 (Arabidopsis H(+)-ATPase 5); ATPase||AHA6; AHA6 (Arabidopsis H(+)-ATPase 6); ATPase||AHA1, PMA, OST2; AHA1 (ARABIDOPSIS H+ ATPASE 1); ATPase/ hydrogen-exporting ATPase, phosphorylative mechanism / protein binding | GO:0005773|vacuole;GO:0009737|response to abscisic acid stimulus;GO:0016020|membrane;GO:0005515|protein binding;GO:0010119|regulation of stomatal movement;GO:0015992|proton transport;GO:0016887|ATPase activity;GO:0008553|hydrogen-exporting ATPase activity, phosphorylative mechanism;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0006812|cation transport;GO:0006754|ATP biosynthetic process;GO:0009414|response to water deprivation;GO:0005634|nucleus | rna-TAV2_LOCUS10053,rna-TAV2_LOCUS15932,rna-TAV2_LOCUS10745,rna-TAV2_LOCUS26077,rna-TAV2_LOCUS13867,rna-TAV2_LOCUS16879,rna-TAV2_LOCUS21232,rna-TAV2_LOCUS5391,rna-TAV2_LOCUS8449 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G20840||AT1G51190||AT5G57390||AT5G17430||AT4G37750||AT1G72570||AT5G65510||AT5G10510 | AIL7; AIL7 (AINTEGUMENTA-like 7); DNA binding / transcription factor||PLT2; PLT2 (PLETHORA 2); transcription factor||BBM; BBM (BABY BOOM); DNA binding / transcription factor||PLT1; PLT1 (PLETHORA 1); transcription factor||ANT, DRG, CKC, CKC1; ANT (AINTEGUMENTA); DNA binding / transcription factor||AIL6, PLT3; AIL6 (AINTEGUMENTA-LIKE 6); DNA binding / transcription factor||AIL5, CHO1; AIL5 (AINTEGUMENTA-LIKE 5); DNA binding / transcription factor||DNA binding / transcription factor | GO:0009887|organ morphogenesis;GO:0007389|pattern specification process;GO:0019827|stem cell maintenance;GO:0009908|flower development;GO:0006355|regulation of transcription, DNA-dependent;GO:0035265|organ growth;GO:0009845|seed germination;GO:0003700|transcription factor activity;GO:0048364|root development;GO:0009791|post-embryonic development;GO:0042127|regulation of cell proliferation;GO:0007276|gamete generation;GO:0005634|nucleus;GO:0010080|regulation of floral meristem growth;GO:0003677|DNA binding | rna-TAV2_LOCUS10123,rna-TAV2_LOCUS12056,rna-TAV2_LOCUS19788,rna-TAV2_LOCUS3273,rna-TAV2_LOCUS20357,rna-TAV2_LOCUS24910,rna-TAV2_LOCUS18181,rna-TAV2_LOCUS4961,rna-TAV2_LOCUS18871 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G05580||AT5G27840||AT2G39840||AT2G29400||AT5G59160||AT5G43380||AT4G11240||AT1G64040 | TOPP3; TOPP3; protein serine/threonine phosphatase||serine/threonine protein phosphatase, putative||TOPP7; TOPP7; protein serine/threonine phosphatase||TOPP4; TOPP4; protein serine/threonine phosphatase||TOPP1, PP1-AT; TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase||TOPP2, PPO; TOPP2; protein serine/threonine phosphatase||TOPP6; TOPP6; protein serine/threonine phosphatase||TOPP8; TOPP8; protein serine/threonine phosphatase | GO:0006470|protein amino acid dephosphorylation;GO:0005730|nucleolus;GO:0004722|protein serine/threonine phosphatase activity;GO:0000164|protein phosphatase type 1 complex;GO:0005737|cytoplasm;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS10280,rna-TAV2_LOCUS5957,rna-TAV2_LOCUS12700,rna-TAV2_LOCUS13438,rna-TAV2_LOCUS19365,rna-TAV2_LOCUS18115,rna-TAV2_LOCUS5811,rna-TAV2_LOCUS19502,rna-TAV2_LOCUS7060 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | - | - | - | rna-TAV2_LOCUS10534,rna-TAV2_LOCUS24654,rna-TAV2_LOCUS16109,rna-TAV2_LOCUS17875,rna-TAV2_LOCUS24109,rna-TAV2_LOCUS16844,rna-TAV2_LOCUS24110,rna-TAV2_LOCUS23850,rna-TAV2_LOCUS3224 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G30740||AT1G06700||AT2G41970||AT2G43230||AT2G47060||AT3G17410||AT3G59350||AT1G48210 | protein kinase, putative||serine/threonine protein kinase, putative | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS12488,rna-TAV2_LOCUS3021,rna-TAV2_LOCUS12948,rna-TAV2_LOCUS14111,rna-TAV2_LOCUS13757,rna-TAV2_LOCUS9776,rna-TAV2_LOCUS17511,rna-TAV2_LOCUS2250,rna-TAV2_LOCUS19461 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G35790 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS17347,rna-TAV2_LOCUS3394,rna-TAV2_LOCUS18775,rna-TAV2_LOCUS25632,rna-TAV2_LOCUS19756,rna-TAV2_LOCUS21412,rna-TAV2_LOCUS2829,rna-TAV2_LOCUS5696,rna-TAV2_LOCUS3415 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G16740||AT2G32790||AT5G56150 | ubiquitin-conjugating enzyme, putative||UBC29; UBC29 (ubiquitin-conjugating enzyme 29); ubiquitin-protein ligase||UBC30; UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase | GO:0019787|small conjugating protein ligase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004842|ubiquitin-protein ligase activity;GO:0005575|cellular_component;GO:0043687|post-translational protein modification;GO:0051246|regulation of protein metabolic process;GO:0006464|protein modification process | rna-TAV2_LOCUS17743,rna-TAV2_LOCUS17924,rna-TAV2_LOCUS9502,rna-TAV2_LOCUS25510,rna-TAV2_LOCUS24591,rna-TAV2_LOCUS23066,rna-TAV2_LOCUS7979,rna-TAV2_LOCUS4983,rna-TAV2_LOCUS9827 | 9 | 0 | Thlaspi arvense | Tarvense | |||
| TA1387:rna-TAV2_LOCUS19778,rna-TAV2_LOCUS19779 | AT5G59870||AT3G20670||AT5G54640||AT5G02560||AT1G08880||AT4G27230||AT1G51060 | HTA5, H2AXA, G-H2AX, GAMMA-H2AX; H2AXA; DNA binding||HTA2; HTA2 (histone H2A); DNA binding||HTA10; HTA10; DNA binding||HTA13; HTA13; DNA binding||HTA6; HTA6; DNA binding||HTA1, RAT5; RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding||HTA12; HTA12; DNA binding | GO:0009294|DNA mediated transformation;GO:0005730|nucleolus;GO:0005618|cell wall;GO:0009617|response to bacterium;GO:0006334|nucleosome assembly;GO:0005634|nucleus;GO:0009611|response to wounding;GO:0000786|nucleosome;GO:0003677|DNA binding | rna-TAV2_LOCUS10922,rna-TAV2_LOCUS18841,rna-TAV2_LOCUS21569,rna-TAV2_LOCUS3168,rna-TAV2_LOCUS5794,rna-TAV2_LOCUS22668,rna-TAV2_LOCUS2105 | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA25:rna-TAV2_LOCUS5697,rna-TAV2_LOCUS6876,rna-TAV2_LOCUS6875,rna-TAV2_LOCUS5685,rna-TAV2_LOCUS6519,rna-TAV2_LOCUS5010,rna-TAV2_LOCUS5011,rna-TAV2_LOCUS5012,rna-TAV2_LOCUS5013 | AT5G42840||AT3G27473||AT3G27510||AT3G28650 | DC1 domain-containing protein||protein binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA262:rna-TAV2_LOCUS22129,rna-TAV2_LOCUS22128,rna-TAV2_LOCUS20899,rna-TAV2_LOCUS21408 | AT5G03910 | ATATH12, ATH12; ATATH12; ATPase, coupled to transmembrane movement of substances / transporter | GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0009941|chloroplast envelope;GO:0005215|transporter activity;GO:0006810|transport;GO:0009507|chloroplast | rna-TAV2_LOCUS11033,rna-TAV2_LOCUS1338,rna-TAV2_LOCUS840,rna-TAV2_LOCUS5146,rna-TAV2_LOCUS25592 | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA27:rna-TAV2_LOCUS14606,rna-TAV2_LOCUS15015,rna-TAV2_LOCUS15014,rna-TAV2_LOCUS14605,rna-TAV2_LOCUS15016,rna-TAV2_LOCUS14912,rna-TAV2_LOCUS14902,rna-TAV2_LOCUS15028,rna-TAV2_LOCUS13591 | AT3G24900||AT2G33020||AT3G25010||AT2G32690||AT2G33080||AT2G32660 | AtRLP22; AtRLP22 (Receptor Like Protein 22); kinase/ protein binding||AtRLP41; AtRLP41 (Receptor Like Protein 41); kinase/ protein binding||AtRLP24; AtRLP24 (Receptor Like Protein 24); kinase/ protein binding||AtRLP28; AtRLP28 (Receptor Like Protein 28); protein binding||ATGRP23, GRP23; GRP23 (GLYCINE-RICH PROTEIN 23)||AtRLP39; AtRLP39 (Receptor Like Protein 39); protein binding | GO:0009737|response to abscisic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0016301|kinase activity;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0006952|defense response | - | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA28:rna-TAV2_LOCUS18859,rna-TAV2_LOCUS20856,rna-TAV2_LOCUS20859,rna-TAV2_LOCUS20858,rna-TAV2_LOCUS20861,rna-TAV2_LOCUS20860,rna-TAV2_LOCUS18853,rna-TAV2_LOCUS18852,rna-TAV2_LOCUS19139 | AT3G15740||AT3G14970 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA59:rna-TAV2_LOCUS13035,rna-TAV2_LOCUS13037,rna-TAV2_LOCUS13038,rna-TAV2_LOCUS13039,rna-TAV2_LOCUS13040,rna-TAV2_LOCUS13041,rna-TAV2_LOCUS14692 | AT5G02910||AT3G03360 | F-box family protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS12256,rna-TAV2_LOCUS13751 | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA67:rna-TAV2_LOCUS22946,rna-TAV2_LOCUS22943,rna-TAV2_LOCUS22944,rna-TAV2_LOCUS22941,rna-TAV2_LOCUS22942,rna-TAV2_LOCUS25855,rna-TAV2_LOCUS22940 | AT1G19320||AT1G75040 | PR5, PR-5; PR5 (PATHOGENESIS-RELATED GENE 5)||pathogenesis-related thaumatin family protein | GO:0005773|vacuole;GO:0010224|response to UV-B;GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0048046|apoplast;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0031540|regulation of anthocyanin biosynthetic process;GO:0009627|systemic acquired resistance | rna-TAV2_LOCUS17781,rna-TAV2_LOCUS301 | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA69:rna-TAV2_LOCUS25145,rna-TAV2_LOCUS25140,rna-TAV2_LOCUS25141,rna-TAV2_LOCUS25142,rna-TAV2_LOCUS25146,rna-TAV2_LOCUS25147,rna-TAV2_LOCUS23789 | AT4G18823 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | rna-TAV2_LOCUS21446,rna-TAV2_LOCUS25139 | 9 | 1 | Thlaspi arvense | Tarvense | |||
| TA128:rna-TAV2_LOCUS8974,rna-TAV2_LOCUS10136,rna-TAV2_LOCUS8976,rna-TAV2_LOCUS10837,rna-TAV2_LOCUS10839;TA531:rna-TAV2_LOCUS22542,rna-TAV2_LOCUS24050,rna-TAV2_LOCUS24049 | AT4G22100||AT4G27820||AT3G62740||AT4G22115||AT4G22105 | SCRL14; SCRL14 (SCR-Like 14)||BGLU9; BGLU9 (BETA GLUCOSIDASE 9); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU7; BGLU7 (BETA GLUCOSIDASE 7); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU3; BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||SCRL26; SCRL26 (SCR-Like 26) | GO:0003824|catalytic activity;GO:0005777|peroxisome;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | rna-TAV2_LOCUS5578 | 9 | 2 | Thlaspi arvense | Tarvense | |||
| TA214:rna-TAV2_LOCUS13337,rna-TAV2_LOCUS13331,rna-TAV2_LOCUS13332,rna-TAV2_LOCUS13033;TA577:rna-TAV2_LOCUS25587,rna-TAV2_LOCUS25585,rna-TAV2_LOCUS25185 | AT1G43080 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | rna-TAV2_LOCUS25633,rna-TAV2_LOCUS25586 | 9 | 2 | Thlaspi arvense | Tarvense | |||
| TA57:rna-TAV2_LOCUS12787,rna-TAV2_LOCUS12786,rna-TAV2_LOCUS12781,rna-TAV2_LOCUS12780,rna-TAV2_LOCUS12783,rna-TAV2_LOCUS12782,rna-TAV2_LOCUS14544;TA1115:rna-TAV2_LOCUS13737,rna-TAV2_LOCUS13739 | AT2G43620||AT2G43610||AT2G43590||AT2G43570 | chitinase, putative||glycoside hydrolase family 19 protein | GO:0008061|chitin binding;GO:0009505|plant-type cell wall;GO:0048046|apoplast;GO:0005886|plasma membrane;GO:0016998|cell wall macromolecule catabolic process;GO:0012505|endomembrane system;GO:0004568|chitinase activity | - | 9 | 2 | Thlaspi arvense | Tarvense | |||
| TA150:rna-TAV2_LOCUS22570,rna-TAV2_LOCUS22571,rna-TAV2_LOCUS24928,rna-TAV2_LOCUS24929,rna-TAV2_LOCUS22741;TA655:rna-TAV2_LOCUS1998,rna-TAV2_LOCUS1993;TA848:rna-TAV2_LOCUS6983,rna-TAV2_LOCUS6984 | AT2G01520||AT4G23680||AT1G14960||AT1G14950 | major latex protein-related / MLP-related||MLP328; MLP328 (MLP-LIKE PROTEIN 328); copper ion binding | GO:0005507|copper ion binding;GO:0003674|molecular_function;GO:0009607|response to biotic stimulus;GO:0005575|cellular_component;GO:0006952|defense response;GO:0010043|response to zinc ion | - | 9 | 3 | Thlaspi arvense | Tarvense | |||
| TA203:rna-TAV2_LOCUS9108,rna-TAV2_LOCUS9110,rna-TAV2_LOCUS9109,rna-TAV2_LOCUS10860;TA1540:rna-TAV2_LOCUS23727,rna-TAV2_LOCUS23724;TA403:rna-TAV2_LOCUS8994,rna-TAV2_LOCUS8993,rna-TAV2_LOCUS8995 | AT3G20960||AT3G20080||AT3G20100||AT3G20140||AT3G20120||AT3G20090 | CYP705A21; CYP705A21; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A33; CYP705A33; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A23; CYP705A23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A15; CYP705A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A19; CYP705A19; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A18; CYP705A18; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0008150|biological_process;GO:0009055|electron carrier activity | - | 9 | 3 | Thlaspi arvense | Tarvense | |||
| TA844:rna-TAV2_LOCUS6929,rna-TAV2_LOCUS6928;TA1400:rna-TAV2_LOCUS19926,rna-TAV2_LOCUS19935;TA1761:rna-TAV2_LOCUS4434,rna-TAV2_LOCUS4437 | AT2G02010||AT5G17330||AT3G17760||AT1G65960 | GAD4; GAD4 (glutamate decarboxylase 4); calmodulin binding||GAD5; GAD5 (glutamate decarboxylase 5); calmodulin binding||GAD2; GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase||GAD, GAD1; GAD; calmodulin binding / glutamate decarboxylase | GO:0006536|glutamate metabolic process;GO:0005516|calmodulin binding;GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0019752|carboxylic acid metabolic process;GO:0004351|glutamate decarboxylase activity;GO:0005575|cellular_component;GO:0006540|glutamate decarboxylation to succinate;GO:0005634|nucleus;GO:0006807|nitrogen compound metabolic process | rna-TAV2_LOCUS10001,rna-TAV2_LOCUS15062,rna-TAV2_LOCUS16078 | 9 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT3G20880||AT3G57670||AT1G51220||AT1G08290||AT1G13290||AT1G34790 | zinc finger (C2H2 type) protein (WIP5)||zinc finger (C2H2 type) protein (WIP4)||NTT; NTT (NO TRANSMITTING TRACT); nucleic acid binding / transcription factor/ zinc ion binding||zinc finger (C2H2 type) protein (WIP3)||DOT5; DOT5 (DEFECTIVELY ORGANIZED TRIBUTARIES 5); transcription factor||TT1; TT1 (transparent testa 1); transcription factor | GO:0048367|shoot development;GO:0010588|cotyledon vascular tissue pattern formation;GO:0003676|nucleic acid binding;GO:0010305|leaf vascular tissue pattern formation;GO:0009860|pollen tube growth;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0008270|zinc ion binding;GO:0005622|intracellular;GO:0010087|phloem or xylem histogenesis;GO:0048364|root development;GO:0009813|flavonoid biosynthetic process;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS10122,rna-TAV2_LOCUS22461,rna-TAV2_LOCUS17588,rna-TAV2_LOCUS3277,rna-TAV2_LOCUS3151,rna-TAV2_LOCUS3408,rna-TAV2_LOCUS24783,rna-TAV2_LOCUS531 | 8 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G10960||AT1G64440||AT4G23920||AT1G12780||AT1G63180 | UGE5; UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5); UDP-glucose 4-epimerase/ protein dimerization||UGE3; UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3); UDP-glucose 4-epimerase/ protein dimerization||UGE2; UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2); UDP-glucose 4-epimerase/ protein dimerization||RHD1, REB1, UGE4; RHD1 (ROOT HAIR DEFECTIVE 1); UDP-glucose 4-epimerase/ protein dimerization||UGE1; UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization | GO:0009969|xyloglucan biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0005829|cytosol;GO:0010053|root epidermal cell differentiation;GO:0005795|Golgi stack;GO:0009555|pollen development;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0046369|galactose biosynthetic process;GO:0046983|protein dimerization activity;GO:0006950|response to stress;GO:0003978|UDP-glucose 4-epimerase activity;GO:0042546|cell wall biogenesis | rna-TAV2_LOCUS21604,rna-TAV2_LOCUS6477,rna-TAV2_LOCUS24900,rna-TAV2_LOCUS26148,rna-TAV2_LOCUS2544,rna-TAV2_LOCUS22430,rna-TAV2_LOCUS5900,rna-TAV2_LOCUS26153 | 8 | 0 | Thlaspi arvense | Tarvense | |||
| TA1317:rna-TAV2_LOCUS18487,rna-TAV2_LOCUS21665 | AT5G03530||AT5G03520||AT3G09910||AT1G43890||AT3G09900||AT4G02850||AT3G46060||AT5G59840 | ATRAB18C, ATRABC2B; ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding / transcription factor binding||phenazine biosynthesis PhzC/PhzF family protein||ARA3, ARA-3, ATRABE1C, ATRAB8A; ATRAB8A; GTP binding||ATRABE1E, ATRAB8E; ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E); GTP binding||ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1; ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding||ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D; ATRAB8C; GTP binding||Ras-related GTP-binding family protein||ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, RABC2A; RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding | GO:0005773|vacuole;GO:0030742|GTP-dependent protein binding;GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0005622|intracellular;GO:0005524|ATP binding;GO:0005525|GTP binding;GO:0012505|endomembrane system;GO:0015031|protein transport;GO:0005886|plasma membrane;GO:0009873|ethylene mediated signaling pathway;GO:0008134|transcription factor binding;GO:0009058|biosynthetic process | rna-TAV2_LOCUS10011,rna-TAV2_LOCUS3392,rna-TAV2_LOCUS10012,rna-TAV2_LOCUS12570,rna-TAV2_LOCUS16714,rna-TAV2_LOCUS19199 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA165:rna-TAV2_LOCUS18433,rna-TAV2_LOCUS18434,rna-TAV2_LOCUS18431,rna-TAV2_LOCUS18432,rna-TAV2_LOCUS18430 | AT1G22380||AT1G22370||AT1G22400 | AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups||UGT85A1, ATUGT85A1; UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtUGT85A3; AtUGT85A3 (UDP-glucosyl transferase 85A3); glucuronosyltransferase/ transcription factor/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity | rna-TAV2_LOCUS8685,rna-TAV2_LOCUS22390,rna-TAV2_LOCUS8408 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA33:rna-TAV2_LOCUS1078,rna-TAV2_LOCUS1473,rna-TAV2_LOCUS3001,rna-TAV2_LOCUS2995,rna-TAV2_LOCUS2994,rna-TAV2_LOCUS2996,rna-TAV2_LOCUS2998,rna-TAV2_LOCUS2997 | AT1G51790||AT1G51800||AT1G49100||AT1G51840||AT1G51890||AT1G51910 | protein kinase-related||leucine-rich repeat protein kinase, putative||kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0003674|molecular_function;GO:0005515|protein binding;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0008150|biological_process;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA38:rna-TAV2_LOCUS7316,rna-TAV2_LOCUS7315,rna-TAV2_LOCUS6166,rna-TAV2_LOCUS6173,rna-TAV2_LOCUS6169,rna-TAV2_LOCUS6167,rna-TAV2_LOCUS5330,rna-TAV2_LOCUS5337 | AT5G45540||AT5G45530||AT5G45480||AT5G45470 | unknown protein | GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA39:rna-TAV2_LOCUS7711,rna-TAV2_LOCUS7219,rna-TAV2_LOCUS5847,rna-TAV2_LOCUS5851,rna-TAV2_LOCUS5493,rna-TAV2_LOCUS5491,rna-TAV2_LOCUS5490,rna-TAV2_LOCUS5035 | AT1G65390||AT5G45090||AT5G45070||AT5G44910||AT4G19920||AT1G51270||AT5G44870 | AtPP2-A7; AtPP2-A7 (Phloem protein 2-A7); carbohydrate binding||disease resistance protein (TIR class), putative||ATPP2-A5; ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5); carbohydrate binding||disease resistance protein (TIR-NBS-LRR class), putative||AtPP2-A8; AtPP2-A8 (Phloem protein 2-A8); carbohydrate binding||structural molecule/ transmembrane receptor||Toll-Interleukin-Resistance (TIR) domain-containing protein | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005198|structural molecule activity;GO:0007165|signal transduction;GO:0030246|carbohydrate binding;GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0009507|chloroplast;GO:0006952|defense response | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA40:rna-TAV2_LOCUS10516,rna-TAV2_LOCUS10515,rna-TAV2_LOCUS10510,rna-TAV2_LOCUS10509,rna-TAV2_LOCUS11691,rna-TAV2_LOCUS11692,rna-TAV2_LOCUS11693,rna-TAV2_LOCUS11687 | AT3G22060||AT3G21960||AT3G21940||AT3G21910 | receptor protein kinase-related||receptor-like protein kinase-related||LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase-related (TAIR:AT2G31620.1); Has 915 Blast hits to 891 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 915; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005773|vacuole;GO:0009737|response to abscisic acid stimulus;GO:0009341|beta-galactosidase complex;GO:0003674|molecular_function;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004565|beta-galactosidase activity;GO:0008150|biological_process | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA41:rna-TAV2_LOCUS11188,rna-TAV2_LOCUS9717,rna-TAV2_LOCUS9718,rna-TAV2_LOCUS11613,rna-TAV2_LOCUS11615,rna-TAV2_LOCUS11614,rna-TAV2_LOCUS11616,rna-TAV2_LOCUS9140 | AT3G21790||AT3G21780||AT3G21760||AT3G21750 | UGT71B1; UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein||UGT71B6; UGT71B6 (UDP-glucosyl transferase 71B6); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups | GO:0009737|response to abscisic acid stimulus;GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016020|membrane;GO:0006970|response to osmotic stress;GO:0008194|UDP-glycosyltransferase activity;GO:0010294|abscisic acid glucosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0046345|abscisic acid catabolic process;GO:0009651|response to salt stress | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA42:rna-TAV2_LOCUS11657,rna-TAV2_LOCUS11656,rna-TAV2_LOCUS11655,rna-TAV2_LOCUS11654,rna-TAV2_LOCUS11649,rna-TAV2_LOCUS11648,rna-TAV2_LOCUS10386,rna-TAV2_LOCUS10387 | AT3G14690||AT3G14660||AT3G14680||AT3G14630||AT3G14620||AT3G14610 | CYP72A9; CYP72A9; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A13; CYP72A13; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A7; CYP72A7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A14; CYP72A14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A15; CYP72A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP72A8; CYP72A8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA43:rna-TAV2_LOCUS14084,rna-TAV2_LOCUS14090,rna-TAV2_LOCUS14089,rna-TAV2_LOCUS14087,rna-TAV2_LOCUS14086,rna-TAV2_LOCUS14085,rna-TAV2_LOCUS14971,rna-TAV2_LOCUS13075 | AT2G29120||AT2G29110||AT2G29100 | ATGLR2.7, GLR2.7; ATGLR2.7; intracellular ligand-gated ion channel||ATGLR2.9, GLR2.9; ATGLR2.9; intracellular ligand-gated ion channel||ATGLR2.8, GLR2.8; ATGLR2.8; intracellular ligand-gated ion channel | GO:0005773|vacuole;GO:0006874|cellular calcium ion homeostasis;GO:0016020|membrane;GO:0005515|protein binding;GO:0005217|intracellular ligand-gated ion channel activity;GO:0012505|endomembrane system;GO:0009416|response to light stimulus | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA44:rna-TAV2_LOCUS14828,rna-TAV2_LOCUS14825,rna-TAV2_LOCUS14824,rna-TAV2_LOCUS14827,rna-TAV2_LOCUS14826,rna-TAV2_LOCUS13816,rna-TAV2_LOCUS13817,rna-TAV2_LOCUS13814 | AT1G07560||AT2G29000||AT2G28960||AT1G51840||AT2G28990 | protein kinase-related||leucine-rich repeat family protein / protein kinase family protein||leucine-rich repeat protein kinase, putative | GO:0016301|kinase activity;GO:0003674|molecular_function;GO:0005515|protein binding;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0008150|biological_process;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA452:rna-TAV2_LOCUS15720,rna-TAV2_LOCUS16373,rna-TAV2_LOCUS17153 | - | - | - | rna-TAV2_LOCUS12665,rna-TAV2_LOCUS12943,rna-TAV2_LOCUS6329,rna-TAV2_LOCUS18062,rna-TAV2_LOCUS16147 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA46:rna-TAV2_LOCUS18142,rna-TAV2_LOCUS16704,rna-TAV2_LOCUS17934,rna-TAV2_LOCUS16695,rna-TAV2_LOCUS16976,rna-TAV2_LOCUS16977,rna-TAV2_LOCUS16972,rna-TAV2_LOCUS15584 | AT3G23950||AT1G24050 | F-box family protein||unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA500:rna-TAV2_LOCUS19672,rna-TAV2_LOCUS19667,rna-TAV2_LOCUS21175 | AT5G54160 | ATOMT1, OMT1; ATOMT1 (O-METHYLTRANSFERASE 1); caffeate O-methyltransferase/ myricetin 3'-O-methyltransferase/ quercetin 3-O-methyltransferase | GO:0033799|myricetin 3'-O-methyltransferase activity;GO:0051555|flavonol biosynthetic process;GO:0047763|caffeate O-methyltransferase activity;GO:0005829|cytosol;GO:0009809|lignin biosynthetic process;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0030755|quercetin 3-O-methyltransferase activity;GO:0005634|nucleus | rna-TAV2_LOCUS25737,rna-TAV2_LOCUS25128,rna-TAV2_LOCUS5346,rna-TAV2_LOCUS5352,rna-TAV2_LOCUS25127 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA51:rna-TAV2_LOCUS4584,rna-TAV2_LOCUS4583,rna-TAV2_LOCUS4582,rna-TAV2_LOCUS4581,rna-TAV2_LOCUS4580,rna-TAV2_LOCUS4587,rna-TAV2_LOCUS4588,rna-TAV2_LOCUS4586 | AT1G17020||AT4G25300||AT1G78550||AT1G17010||AT4G25310 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0016491|oxidoreductase activity;GO:0010260|organ senescence;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009813|flavonoid biosynthetic process;GO:0005575|cellular_component | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA52:rna-TAV2_LOCUS4910,rna-TAV2_LOCUS4900,rna-TAV2_LOCUS4902,rna-TAV2_LOCUS4904,rna-TAV2_LOCUS4907,rna-TAV2_LOCUS4906,rna-TAV2_LOCUS4909,rna-TAV2_LOCUS4901 | AT5G10530||AT3G53810||AT5G65600 | lectin protein kinase, putative||legume lectin family protein / protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA53:rna-TAV2_LOCUS26106,rna-TAV2_LOCUS26105,rna-TAV2_LOCUS26107,rna-TAV2_LOCUS26103,rna-TAV2_LOCUS26104,rna-TAV2_LOCUS26110,rna-TAV2_LOCUS26108,rna-TAV2_LOCUS26102 | AT4G37340||AT4G37430||AT4G37370||AT4G37400||AT1G66540 | CYP81D3; CYP81D3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81D8; CYP81D8; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP91A2, CYP81F1; CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP81F3; CYP81F3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||cytochrome P450, putative | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0005886|plasma membrane;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0005783|endoplasmic reticulum;GO:0009055|electron carrier activity | - | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA55:rna-TAV2_LOCUS6614,rna-TAV2_LOCUS6617,rna-TAV2_LOCUS6616,rna-TAV2_LOCUS6619,rna-TAV2_LOCUS6618,rna-TAV2_LOCUS6621,rna-TAV2_LOCUS6623 | AT2G03030||AT2G03300||AT1G57850 | Toll-Interleukin-Resistance (TIR) domain-containing protein | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0007165|signal transduction;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | rna-TAV2_LOCUS7449 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA56:rna-TAV2_LOCUS9537,rna-TAV2_LOCUS9536,rna-TAV2_LOCUS9848,rna-TAV2_LOCUS9849,rna-TAV2_LOCUS9845,rna-TAV2_LOCUS9844,rna-TAV2_LOCUS11819 | AT2G17080||AT2G17070||AT4G35200 | unknown protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS23365 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA60:rna-TAV2_LOCUS13448,rna-TAV2_LOCUS13130,rna-TAV2_LOCUS13125,rna-TAV2_LOCUS13126,rna-TAV2_LOCUS13123,rna-TAV2_LOCUS13124,rna-TAV2_LOCUS13129 | AT2G24645||AT2G24680||AT2G24690||AT2G24650||AT4G00260 | ||MEE45; MEE45 (maternal effect embryo arrest 45); DNA binding / transcription factor||DNA binding / transcription factor||transcriptional factor B3 family protein | ;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0003677|DNA binding | rna-TAV2_LOCUS13234 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA620:rna-TAV2_LOCUS1133,rna-TAV2_LOCUS1134 | AT1G04760||AT1G04750||AT2G32670||AT2G33120||AT4G15780 | ATVAMP726, VAMP726; ATVAMP726||SAR1, VAMP722, ATVAMP722; SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)||ATVAMP725, VAMP725; ATVAMP725||ATVAMP724, VAMP724; ATVAMP724||VAMP7B, VAMP721, ATVAMP721, AT VAMP7B; VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) | GO:0003674|molecular_function;GO:0016020|membrane;GO:0016192|vesicle-mediated transport;GO:0005886|plasma membrane;GO:0006810|transport;GO:0009507|chloroplast;GO:0005768|endosome | rna-TAV2_LOCUS15027,rna-TAV2_LOCUS14190,rna-TAV2_LOCUS11840,rna-TAV2_LOCUS24338,rna-TAV2_LOCUS4324,rna-TAV2_LOCUS24690 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA94:rna-TAV2_LOCUS19223,rna-TAV2_LOCUS19220,rna-TAV2_LOCUS19221,rna-TAV2_LOCUS19218,rna-TAV2_LOCUS19219,rna-TAV2_LOCUS19216 | AT5G03610||AT5G03590||AT5G03600 | GDSL-motif lipase/hydrolase protein-related||GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | rna-TAV2_LOCUS12233,rna-TAV2_LOCUS18825 | 8 | 1 | Thlaspi arvense | Tarvense | |||
| TA1048:rna-TAV2_LOCUS9806,rna-TAV2_LOCUS9805;TA1571:rna-TAV2_LOCUS24365,rna-TAV2_LOCUS23027 | AT2G16600||AT4G34960||AT4G34870||AT2G21130||AT3G56070||AT4G38740 | ROC3; ROC3; peptidyl-prolyl cis-trans isomerase||peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative||ROC2; ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase||ROC1; ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase||peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase||ROC5, ATCYP1; ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0006457|protein folding;GO:0048046|apoplast;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0009507|chloroplast;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS11420,rna-TAV2_LOCUS12905,rna-TAV2_LOCUS17941,rna-TAV2_LOCUS25267 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA104:rna-TAV2_LOCUS1090,rna-TAV2_LOCUS1089,rna-TAV2_LOCUS2637,rna-TAV2_LOCUS2638,rna-TAV2_LOCUS2639;TA1120:rna-TAV2_LOCUS13784,rna-TAV2_LOCUS14718 | AT2G31050 | plastocyanin-like domain-containing protein | GO:0009055|electron carrier activity | rna-TAV2_LOCUS13950 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA105:rna-TAV2_LOCUS1420,rna-TAV2_LOCUS1425,rna-TAV2_LOCUS1424,rna-TAV2_LOCUS427,rna-TAV2_LOCUS673;TA303:rna-TAV2_LOCUS1423,rna-TAV2_LOCUS426,rna-TAV2_LOCUS670 | AT1G53920||AT5G40990||AT1G53990||AT1G54020||AT1G54030||AT1G54000||AT1G54010 | myrosinase-associated protein, putative||GDSL-motif lipase, putative||GLIP5; GLIP5; carboxylesterase/ lipase||GLIP1; GLIP1 (GDSL LIPASE1); carboxylesterase/ lipase||GLIP3; GLIP3; carboxylesterase/ lipase | GO:0005773|vacuole;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0016298|lipase activity;GO:0000325|plant-type vacuole;GO:0006629|lipid metabolic process;GO:0005783|endoplasmic reticulum;GO:0010168|ER body;GO:0006114|glycerol biosynthetic process;GO:0016788|hydrolase activity, acting on ester bonds;GO:0005774|vacuolar membrane;GO:0009620|response to fungus;GO:0009866|induced systemic resistance, ethylene mediated signaling pathway;GO:0042742|defense response to bacterium;GO:0016020|membrane;GO:0050832|defense response to fungus;GO:0005615|extracellular space;GO:0009751|response to salicylic acid stimulus;GO:0004091|carboxylesterase activity;GO:0009705|plant-type vacuole membrane;GO:0009505|plant-type cell wall | - | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA133:rna-TAV2_LOCUS12985,rna-TAV2_LOCUS12987,rna-TAV2_LOCUS12986,rna-TAV2_LOCUS14767,rna-TAV2_LOCUS14774;TA1213:rna-TAV2_LOCUS15995,rna-TAV2_LOCUS15996 | AT2G43890||AT2G43880||AT2G43870||AT2G43860||AT3G59850 | polygalacturonase, putative / pectinase, putative | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | rna-TAV2_LOCUS24532 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA135:rna-TAV2_LOCUS14402,rna-TAV2_LOCUS14401,rna-TAV2_LOCUS14398,rna-TAV2_LOCUS14397,rna-TAV2_LOCUS14399;TA1390:rna-TAV2_LOCUS19785,rna-TAV2_LOCUS19786 | AT5G59845||AT2G39540 | gibberellin-regulated family protein | GO:0009739|response to gibberellin stimulus;GO:0012505|endomembrane system;GO:0003674|molecular_function | rna-TAV2_LOCUS21441 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA250:rna-TAV2_LOCUS19438,rna-TAV2_LOCUS19439,rna-TAV2_LOCUS19436,rna-TAV2_LOCUS19437;TA253:rna-TAV2_LOCUS20237,rna-TAV2_LOCUS20235,rna-TAV2_LOCUS20236,rna-TAV2_LOCUS20229 | AT5G54550||AT5G54330||AT5G52940 | unknown protein | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA420:rna-TAV2_LOCUS12832,rna-TAV2_LOCUS12838,rna-TAV2_LOCUS12837;TA447:rna-TAV2_LOCUS14950,rna-TAV2_LOCUS14951,rna-TAV2_LOCUS14953 | AT3G22650||AT4G04690||AT2G24020||AT4G30620 | F-box family protein (FBX15)||ATSFL61, SFL61, CEG; CEG (CEGENDUO)||unknown protein | GO:0003674|molecular_function;GO:0009535|chloroplast thylakoid membrane;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009733|response to auxin stimulus;GO:0009941|chloroplast envelope;GO:0004842|ubiquitin-protein ligase activity;GO:0009570|chloroplast stroma;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0010311|lateral root formation | rna-TAV2_LOCUS23009,rna-TAV2_LOCUS14151 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA436:rna-TAV2_LOCUS14081,rna-TAV2_LOCUS14074,rna-TAV2_LOCUS12333;TA1131:rna-TAV2_LOCUS13966,rna-TAV2_LOCUS13965 | AT2G41920||AT2G41930||AT2G17900 | SDG37; SDG37; zinc ion binding||ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0008150|biological_process;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS13787,rna-TAV2_LOCUS8960,rna-TAV2_LOCUS13700 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA564:rna-TAV2_LOCUS24822,rna-TAV2_LOCUS24189,rna-TAV2_LOCUS24191;TA581:rna-TAV2_LOCUS25911,rna-TAV2_LOCUS24990,rna-TAV2_LOCUS22481 | AT2G13900||AT5G02360||AT5G02340 | DC1 domain-containing protein | GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0005622|intracellular;GO:0005515|protein binding | rna-TAV2_LOCUS22635,rna-TAV2_LOCUS24040 | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA88:rna-TAV2_LOCUS13535,rna-TAV2_LOCUS13536,rna-TAV2_LOCUS13537,rna-TAV2_LOCUS13538,rna-TAV2_LOCUS13541,rna-TAV2_LOCUS13833;TA1632:rna-TAV2_LOCUS25781,rna-TAV2_LOCUS25778 | AT2G23620||AT2G23600||AT2G23580 | ATMES4, MES4, ABE4; MES4 (METHYL ESTERASE 4); hydrolase/ hydrolase, acting on ester bonds / methyl salicylate esterase||ATMES1, MES1; MES1 (METHYL ESTERASE 1); hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase/ methyl salicylate esterase||ACL, ATMES2, MES2, ATME8, ME8; ACL (ACETONE-CYANOHYDRIN LYASE); hydrolase/ hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase/ methyl salicylate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0009696|salicylic acid metabolic process;GO:0009817|defense response to fungus, incompatible interaction;GO:0005575|cellular_component;GO:0016787|hydrolase activity;GO:0009627|systemic acquired resistance | - | 8 | 2 | Thlaspi arvense | Tarvense | |||
| TA335:rna-TAV2_LOCUS458,rna-TAV2_LOCUS2040,rna-TAV2_LOCUS2035;TA1481:rna-TAV2_LOCUS22062,rna-TAV2_LOCUS22063;TA1252:rna-TAV2_LOCUS16935,rna-TAV2_LOCUS16934 | AT1G08090||AT5G60770||AT5G60780||AT3G45060 | ATNRT2:1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1; ATNRT2:1 (NITRATE TRANSPORTER 2:1); nitrate transmembrane transporter||ATNRT2.4, NRT2.4; ATNRT2.4; nitrate transmembrane transporter||ATNRT2.6, NRT2.6; ATNRT2.6; nitrate transmembrane transporter||ATNRT2.3, NRT2.3; ATNRT2.3; nitrate transmembrane transporter | GO:0015706|nitrate transport;GO:0016020|membrane;GO:0015112|nitrate transmembrane transporter activity;GO:0005886|plasma membrane;GO:0048527|lateral root development;GO:0010167|response to nitrate;GO:0009507|chloroplast | rna-TAV2_LOCUS4702 | 8 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT1G06590||AT4G15890 | binding||unknown protein | GO:0005488|binding;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS10219,rna-TAV2_LOCUS22088,rna-TAV2_LOCUS15634,rna-TAV2_LOCUS291,rna-TAV2_LOCUS25937,rna-TAV2_LOCUS8926,rna-TAV2_LOCUS5881 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G62040||AT2G45170||AT4G16520||AT3G60640||AT4G21980||AT4G04620 | ATG8F; ATG8F (autophagy 8f); microtubule binding||ATATG8E, ATG8E; AtATG8e; microtubule binding||APG8A, ATG8A; APG8A (AUTOPHAGY 8A); APG8 activating enzyme/ APG8-specific protease/ Atg8 ligase||ATG8C; ATG8C (autophagy 8c); microtubule binding||ATG8G; ATG8G (AUTOPHAGY 8G); microtubule binding||ATG8B; ATG8B (autophagy 8b); microtubule binding | GO:0008017|microtubule binding;GO:0005776|autophagic vacuole;GO:0019779|APG8 activating enzyme activity;GO:0016020|membrane;GO:0006914|autophagy;GO:0005775|vacuolar lumen;GO:0009267|cellular response to starvation;GO:0005737|cytoplasm;GO:0019776|Atg8 ligase activity | rna-TAV2_LOCUS1067,rna-TAV2_LOCUS5999,rna-TAV2_LOCUS13142,rna-TAV2_LOCUS23971,rna-TAV2_LOCUS16015,rna-TAV2_LOCUS25387,rna-TAV2_LOCUS21256 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G02520||AT5G38480||AT1G35160||AT5G65430||AT5G10450 | GRF8, 14-3-3KAPPA, GF14 KAPPA; GRF8 (GENERAL REGULATORY FACTOR 8); protein binding / protein phosphorylated amino acid binding||GRF7, GF14 NU; GRF7 (GENERAL REGULATORY FACTOR 7); protein binding / protein phosphorylated amino acid binding||GRF6, AFT1, 14-3-3lambda; GRF6 (G-box regulating factor 6); protein binding / protein phosphorylated amino acid binding||GRF4, 14-3-3PHI, GF14 PHI; GF14 PHI (GF14 PROTEIN PHI CHAIN); protein binding / protein phosphorylated amino acid binding||GRF3, RCI1; GRF3 (GENERAL REGULATORY FACTOR 3); ATP binding / protein binding / protein phosphorylated amino acid binding | GO:0005773|vacuole;GO:0042742|defense response to bacterium;GO:0005829|cytosol;GO:0005515|protein binding;GO:0046686|response to cadmium ion;GO:0016310|phosphorylation;GO:0005635|nuclear envelope;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0005524|ATP binding;GO:0009570|chloroplast stroma;GO:0009505|plant-type cell wall;GO:0045309|protein phosphorylated amino acid binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0005739|mitochondrion | rna-TAV2_LOCUS11164,rna-TAV2_LOCUS23218,rna-TAV2_LOCUS20697,rna-TAV2_LOCUS3589,rna-TAV2_LOCUS20764,rna-TAV2_LOCUS6960,rna-TAV2_LOCUS19993 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G16740||AT4G27960||AT5G56150||AT5G53300||AT3G08680 | leucine-rich repeat transmembrane protein kinase, putative||UBC29; UBC29 (ubiquitin-conjugating enzyme 29); ubiquitin-protein ligase||UBC30; UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase||UBC9; UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase||UBC10; UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase | GO:0016301|kinase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004842|ubiquitin-protein ligase activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0005524|ATP binding;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity | rna-TAV2_LOCUS11299,rna-TAV2_LOCUS19230,rna-TAV2_LOCUS18465,rna-TAV2_LOCUS6228,rna-TAV2_LOCUS24161,rna-TAV2_LOCUS25446,rna-TAV2_LOCUS8938 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G40087 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30200.1); Has 103 Blast hits to 103 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS12331,rna-TAV2_LOCUS21726,rna-TAV2_LOCUS12429,rna-TAV2_LOCUS13051,rna-TAV2_LOCUS17698,rna-TAV2_LOCUS7667,rna-TAV2_LOCUS1706 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G54960||AT3G08970||AT4G33070||AT5G01320 | PDC2; PDC2 (pyruvate decarboxylase-2); carboxy-lyase/ catalytic/ magnesium ion binding / pyruvate decarboxylase/ thiamin pyrophosphate binding||ATERDJ3A, TMS1; ATERDJ3A; oxidoreductase||pyruvate decarboxylase, putative | GO:0005788|endoplasmic reticulum lumen;GO:0000287|magnesium ion binding;GO:0016491|oxidoreductase activity;GO:0016831|carboxy-lyase activity;GO:0003824|catalytic activity;GO:0016020|membrane;GO:0009860|pollen tube growth;GO:0001666|response to hypoxia;GO:0009408|response to heat;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0034605|cellular response to heat;GO:0030976|thiamin pyrophosphate binding;GO:0004737|pyruvate decarboxylase activity;GO:0016740|transferase activity | rna-TAV2_LOCUS19512,rna-TAV2_LOCUS9700,rna-TAV2_LOCUS4186,rna-TAV2_LOCUS4187,rna-TAV2_LOCUS19745,rna-TAV2_LOCUS7278,rna-TAV2_LOCUS4513 | 7 | 0 | Thlaspi arvense | Tarvense | |||
| TA102:rna-TAV2_LOCUS26216,rna-TAV2_LOCUS26221,rna-TAV2_LOCUS26218,rna-TAV2_LOCUS26219,rna-TAV2_LOCUS26223,rna-TAV2_LOCUS26224 | - | - | - | rna-TAV2_LOCUS26215 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA117:rna-TAV2_LOCUS5750,rna-TAV2_LOCUS6934,rna-TAV2_LOCUS6933,rna-TAV2_LOCUS6931,rna-TAV2_LOCUS6930 | AT2G02040||AT2G02020||AT1G14610 | ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2; PTR2 (PEPTIDE TRANSPORTER 2); dipeptide transporter/ high affinity oligopeptide transporter/ nitrate transmembrane transporter/ peptide transporter/ transporter/ tripeptide transporter||TWN2, VALRS; TWN2 (TWIN 2); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / valine-tRNA ligase||proton-dependent oligopeptide transport (POT) family protein | GO:0005773|vacuole;GO:0015197|peptide transporter activity;GO:0005886|plasma membrane;GO:0009793|embryonic development ending in seed dormancy;GO:0000325|plant-type vacuole;GO:0009507|chloroplast;GO:0006418|tRNA aminoacylation for protein translation;GO:0005774|vacuolar membrane;GO:0006857|oligopeptide transport;GO:0015334|high affinity oligopeptide transporter activity;GO:0042939|tripeptide transport;GO:0015833|peptide transport;GO:0016020|membrane;GO:0004812|aminoacyl-tRNA ligase activity;GO:0000166|nucleotide binding;GO:0042937|tripeptide transporter activity;GO:0042936|dipeptide transporter activity;GO:0005524|ATP binding;GO:0004832|valine-tRNA ligase activity;GO:0005215|transporter activity;GO:0005739|mitochondrion;GO:0042938|dipeptide transport | rna-TAV2_LOCUS3759,rna-TAV2_LOCUS4433 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA1226:rna-TAV2_LOCUS16285,rna-TAV2_LOCUS16281 | AT1G69410||AT1G26630||AT1G13950 | EIF-5A, ELF5A-1, ATELF5A-1, EIF5A; ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1); translation initiation factor||ATELF5A-3, ELF5A-3; ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3); translation initiation factor||FBR12, ATELF5A-2, ELF5A-2; FBR12 (FUMONISIN B1-RESISTANT12); translation initiation factor | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0042742|defense response to bacterium;GO:0034050|host programmed cell death induced by symbiont;GO:0010089|xylem development;GO:0046686|response to cadmium ion;GO:0012501|programmed cell death;GO:0009617|response to bacterium;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0009611|response to wounding | rna-TAV2_LOCUS113,rna-TAV2_LOCUS1346,rna-TAV2_LOCUS4287,rna-TAV2_LOCUS9971,rna-TAV2_LOCUS4761 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA140:rna-TAV2_LOCUS16859,rna-TAV2_LOCUS16858,rna-TAV2_LOCUS15576,rna-TAV2_LOCUS15575,rna-TAV2_LOCUS17746 | AT1G79310||AT1G79320||AT1G79330||AT1G79340||AT1G16420 | AtMC4; AtMC4 (metacaspase 4); cysteine-type peptidase||AMC6, ATMCP2B, ATMC5; ATMC5 (ARABIDOPSIS THALIANA METACASPASE 5); cysteine-type endopeptidase||AtMC7; AtMC7 (metacaspase 7); cysteine-type endopeptidase||ATMC8, MC8; MC8 (METACASPASE 8); cysteine-type endopeptidase||AtMC6; AtMC6 (metacaspase 6); cysteine-type endopeptidase | GO:0010421|hydrogen peroxide-mediated programmed cell death;GO:0042542|response to hydrogen peroxide;GO:0010225|response to UV-C;GO:0012501|programmed cell death;GO:0006917|induction of apoptosis;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0006508|proteolysis;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS6261,rna-TAV2_LOCUS3838 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA1443:rna-TAV2_LOCUS20794,rna-TAV2_LOCUS20793 | AT5G57015||AT4G28880||AT4G14340||AT1G72700||AT4G28540 | CKI1, CKL11; CKI1 (CASEIN KINASE I); kinase/ protein serine/threonine kinase||haloacid dehalogenase-like hydrolase family protein||ckl3; ckl3 (Casein Kinase I-like 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||ckl12; ckl12 (Casein Kinase I-like 12); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||CKL6, PAPK1; CKL6 (CASEIN KINASE I-LIKE 6); kinase/ protein serine/threonine kinase | GO:0005634|nucleus;GO:0016301|kinase activity;GO:0016310|phosphorylation;GO:0016020|membrane;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0015914|phospholipid transport;GO:0016021|integral to membrane;GO:0006754|ATP biosynthetic process;GO:0009506|plasmodesma;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS25451,rna-TAV2_LOCUS26180,rna-TAV2_LOCUS8365,rna-TAV2_LOCUS15350,rna-TAV2_LOCUS22848 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA1737:rna-TAV2_LOCUS15079,rna-TAV2_LOCUS15078 | AT1G62380||AT1G12010||AT1G05010 | ACO2, ATACO2; ACO2 (ACC OXIDASE 2); 1-aminocyclopropane-1-carboxylate oxidase||EFE, ACO4, EAT1; EFE (ETHYLENE-FORMING ENZYME); 1-aminocyclopropane-1-carboxylate oxidase||1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative | GO:0005507|copper ion binding;GO:0009727|detection of ethylene stimulus;GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009620|response to fungus;GO:0009651|response to salt stress;GO:0009693|ethylene biosynthetic process | rna-TAV2_LOCUS26114,rna-TAV2_LOCUS635,rna-TAV2_LOCUS8724,rna-TAV2_LOCUS3046,rna-TAV2_LOCUS7299 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA202:rna-TAV2_LOCUS11522,rna-TAV2_LOCUS9239,rna-TAV2_LOCUS9895,rna-TAV2_LOCUS11645 | ATCG00905 | RPS12C, RPS12; chloroplast gene encoding ribosomal protein s12. The gene is located in three distinct loci on the chloroplast genome and is transpliced to make one transcript. | GO:0006412|translation;GO:0000312|plastid small ribosomal subunit;GO:0003735|structural constituent of ribosome | rna-TAV2_LOCUS11423,rna-TAV2_LOCUS25705,rna-TAV2_LOCUS5474 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA222:rna-TAV2_LOCUS15377,rna-TAV2_LOCUS15378,rna-TAV2_LOCUS15371,rna-TAV2_LOCUS15372 | AT4G13800||AT3G23870||AT1G34470 | permease-related | GO:0005886|plasma membrane;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS10565,rna-TAV2_LOCUS25940,rna-TAV2_LOCUS532 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA58:rna-TAV2_LOCUS12867,rna-TAV2_LOCUS12874,rna-TAV2_LOCUS12873,rna-TAV2_LOCUS12872,rna-TAV2_LOCUS12871,rna-TAV2_LOCUS14641,rna-TAV2_LOCUS14642 | AT2G29480||AT2G29490||AT2G29470||AT2G29460||AT2G29450||AT2G29440||AT2G29420 | ATGSTU5, ATGSTU1, AT103-1A; ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5); glutathione binding / glutathione transferase||ATGSTU1, GST19; ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1); glutathione transferase||ATGSTU2, GST20; ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2); glutathione transferase||ATGSTU6, GST24; ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6); glutathione transferase||ATGSTU3, GST21; ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3); glutathione transferase||ATGSTU7, GST25; ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7); glutathione transferase||ATGSTU4, GST22; ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4); glutathione transferase | GO:0009751|response to salicylic acid stimulus;GO:0043295|glutathione binding;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0004364|glutathione transferase activity;GO:0009407|toxin catabolic process;GO:0006979|response to oxidative stress | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA61:rna-TAV2_LOCUS14751,rna-TAV2_LOCUS14748,rna-TAV2_LOCUS14749,rna-TAV2_LOCUS14754,rna-TAV2_LOCUS14755,rna-TAV2_LOCUS14752,rna-TAV2_LOCUS13820 | AT2G37820||AT2G37800||AT2G37805||AT2G37780 | ||DC1 domain-containing protein | ;GO:0003674|molecular_function;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA62:rna-TAV2_LOCUS15320,rna-TAV2_LOCUS16345,rna-TAV2_LOCUS16344,rna-TAV2_LOCUS16346,rna-TAV2_LOCUS16340,rna-TAV2_LOCUS15593,rna-TAV2_LOCUS17343 | AT1G66650||AT1G66620||AT1G66660 | seven in absentia (SINA) protein, putative | GO:0016567|protein ubiquitination;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0007275|multicellular organismal development;GO:0005634|nucleus | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA63:rna-TAV2_LOCUS16568,rna-TAV2_LOCUS16569,rna-TAV2_LOCUS16570,rna-TAV2_LOCUS17283,rna-TAV2_LOCUS16571,rna-TAV2_LOCUS17189,rna-TAV2_LOCUS16249 | AT1G73260 | trypsin and protease inhibitor family protein / Kunitz family protein | GO:0009751|response to salicylic acid stimulus;GO:0042542|response to hydrogen peroxide;GO:0042742|defense response to bacterium;GO:0012501|programmed cell death;GO:0004866|endopeptidase inhibitor activity;GO:0009651|response to salt stress;GO:0005739|mitochondrion | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA64:rna-TAV2_LOCUS20223,rna-TAV2_LOCUS20224,rna-TAV2_LOCUS20221,rna-TAV2_LOCUS20222,rna-TAV2_LOCUS20758,rna-TAV2_LOCUS18827,rna-TAV2_LOCUS18826 | AT4G24600 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA66:rna-TAV2_LOCUS22525,rna-TAV2_LOCUS24824,rna-TAV2_LOCUS22524,rna-TAV2_LOCUS22523,rna-TAV2_LOCUS23424,rna-TAV2_LOCUS24701,rna-TAV2_LOCUS23419 | AT4G15680 | glutaredoxin family protein | GO:0008794|arsenate reductase (glutaredoxin) activity;GO:0015035|protein disulfide oxidoreductase activity;GO:0012505|endomembrane system;GO:0045454|cell redox homeostasis;GO:0009055|electron carrier activity | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA70:rna-TAV2_LOCUS25889,rna-TAV2_LOCUS25887,rna-TAV2_LOCUS24901,rna-TAV2_LOCUS25886,rna-TAV2_LOCUS25885,rna-TAV2_LOCUS25440,rna-TAV2_LOCUS25472 | AT4G10420||AT5G38590||AT5G38580||AT5G38660||AT1G32375 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G10400.2); Has 664 Blast hits to 644 proteins in 11 species: Archae - 0; Bacteria - 8; Metazoa - 17; Fungi - 0; Plants - 639; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||F-box family protein||APE1; APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G38570.1); Has 225 Blast hits to 219 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0016020|membrane;GO:0009535|chloroplast thylakoid membrane;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast | - | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA76:rna-TAV2_LOCUS899,rna-TAV2_LOCUS898,rna-TAV2_LOCUS2440,rna-TAV2_LOCUS2441,rna-TAV2_LOCUS2444,rna-TAV2_LOCUS2439 | AT1G23950||AT1G23970||AT1G23960 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS1060 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA82:rna-TAV2_LOCUS8799,rna-TAV2_LOCUS8798,rna-TAV2_LOCUS8797,rna-TAV2_LOCUS8796,rna-TAV2_LOCUS10815,rna-TAV2_LOCUS8795 | AT3G21240||AT3G21230||AT1G51680 | 4CL5; 4CL5 (4-coumarate:CoA ligase 5); 4-coumarate-CoA ligase||4CL1, 4CL.1, AT4CL1; 4CL1 (4-COUMARATE:COA LIGASE 1); 4-coumarate-CoA ligase||4CL2, AT4CL2; 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase | GO:0009698|phenylpropanoid metabolic process;GO:0009699|phenylpropanoid biosynthetic process;GO:0016207|4-coumarate-CoA ligase activity;GO:0005575|cellular_component;GO:0009620|response to fungus;GO:0009611|response to wounding;GO:0009411|response to UV | rna-TAV2_LOCUS95 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA89:rna-TAV2_LOCUS14191,rna-TAV2_LOCUS14192,rna-TAV2_LOCUS14194,rna-TAV2_LOCUS14195,rna-TAV2_LOCUS13265,rna-TAV2_LOCUS13275 | AT3G24900||AT2G33060||AT2G33050||AT2G33080||AT3G25020 | AtRLP42; AtRLP42 (Receptor Like Protein 42); protein binding||AtRLP28; AtRLP28 (Receptor Like Protein 28); protein binding||AtRLP26; AtRLP26 (Receptor Like Protein 26); kinase/ protein binding||AtRLP27; AtRLP27 (Receptor Like Protein 27); kinase/ protein binding||AtRLP39; AtRLP39 (Receptor Like Protein 39); protein binding | GO:0016301|kinase activity;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0006952|defense response | rna-TAV2_LOCUS11365 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA93:rna-TAV2_LOCUS17699,rna-TAV2_LOCUS17701,rna-TAV2_LOCUS17700,rna-TAV2_LOCUS17703,rna-TAV2_LOCUS17382,rna-TAV2_LOCUS17383 | AT2G27420||AT3G49340 | cysteine proteinase, putative | GO:0012505|endomembrane system;GO:0006508|proteolysis | rna-TAV2_LOCUS12456 | 7 | 1 | Thlaspi arvense | Tarvense | |||
| TA108:rna-TAV2_LOCUS2688,rna-TAV2_LOCUS2691,rna-TAV2_LOCUS1155,rna-TAV2_LOCUS1153,rna-TAV2_LOCUS1154;TA1055:rna-TAV2_LOCUS9889,rna-TAV2_LOCUS9888 | AT1G49210||AT1G49200||AT1G49230||AT3G18773 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA1159:rna-TAV2_LOCUS14578,rna-TAV2_LOCUS13593;TA1214:rna-TAV2_LOCUS16034,rna-TAV2_LOCUS16029 | AT2G36410||AT3G09980||AT3G52920||AT3G52900||AT5G03650 | SBE2.2; SBE2.2 (starch branching enzyme 2.2); 1,4-alpha-glucan branching enzyme||unknown protein | GO:0005982|starch metabolic process;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0009570|chloroplast stroma;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0003844|1,4-alpha-glucan branching enzyme activity;GO:0009507|chloroplast;GO:0010021|amylopectin biosynthetic process | rna-TAV2_LOCUS12079,rna-TAV2_LOCUS8872,rna-TAV2_LOCUS20973 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA1239:rna-TAV2_LOCUS16718,rna-TAV2_LOCUS16717;TA1389:rna-TAV2_LOCUS19784,rna-TAV2_LOCUS19777 | AT3G46010||AT3G46000||AT5G59890||AT5G59880||AT4G00680||AT4G25590||AT5G52360 | ADF1, atadf, ATADF1; ADF1 (ACTIN DEPOLYMERIZING FACTOR 1); actin binding||ADF3; ADF3 (ACTIN DEPOLYMERIZING FACTOR 3); actin binding||ADF7; ADF7 (actin depolymerizing factor 7); actin binding||ADF2; ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding||ADF10; ADF10 (ACTIN DEPOLYMERIZING FACTOR 10); actin binding||ADF8; ADF8 (ACTIN DEPOLYMERIZING FACTOR 8); actin binding||ADF4, ATADF4; ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding | GO:0042742|defense response to bacterium;GO:0009870|defense response signaling pathway, resistance gene-dependent;GO:0046686|response to cadmium ion;GO:0003779|actin binding;GO:0005622|intracellular;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0007015|actin filament organization;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS18998,rna-TAV2_LOCUS24892,rna-TAV2_LOCUS19429 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA123:rna-TAV2_LOCUS10220,rna-TAV2_LOCUS10226,rna-TAV2_LOCUS9870,rna-TAV2_LOCUS9894,rna-TAV2_LOCUS8766;TA1056:rna-TAV2_LOCUS9904,rna-TAV2_LOCUS10756 | ATCG01100||ATCG01090 | NDHI; Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex||NDHA; NADH dehydrogenase ND1 | GO:0009535|chloroplast thylakoid membrane;GO:0016020|membrane | - | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA1661:rna-TAV2_LOCUS4699,rna-TAV2_LOCUS4697;TA1766:rna-TAV2_LOCUS4503,rna-TAV2_LOCUS4506 | AT5G03340||AT3G53230||AT3G09840 | CDC48, ATCDC48, CDC48A; CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding||cell division cycle protein 48, putative / CDC48, putative | GO:0005829|cytosol;GO:0005515|protein binding;GO:0046686|response to cadmium ion;GO:0009860|pollen tube growth;GO:0005886|plasma membrane;GO:0051301|cell division;GO:0005819|spindle;GO:0005737|cytoplasm;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0042802|identical protein binding;GO:0016310|phosphorylation;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0016887|ATPase activity;GO:0009846|pollen germination;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0017111|nucleoside-triphosphatase activity;GO:0005488|binding;GO:0005635|nuclear envelope;GO:0005524|ATP binding;GO:0016787|hydrolase activity | rna-TAV2_LOCUS11132,rna-TAV2_LOCUS18045,rna-TAV2_LOCUS3791 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA199:rna-TAV2_LOCUS10805,rna-TAV2_LOCUS10804,rna-TAV2_LOCUS9715,rna-TAV2_LOCUS9716;TA298:rna-TAV2_LOCUS1203,rna-TAV2_LOCUS1202,rna-TAV2_LOCUS1209 | AT1G31450 | aspartyl protease family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA200:rna-TAV2_LOCUS10864,rna-TAV2_LOCUS10865,rna-TAV2_LOCUS10866,rna-TAV2_LOCUS10862;TA1437:rna-TAV2_LOCUS20631,rna-TAV2_LOCUS20632 | AT2G30810 | gibberellin-regulated family protein | GO:0012505|endomembrane system;GO:0009739|response to gibberellin stimulus | rna-TAV2_LOCUS5412 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA205:rna-TAV2_LOCUS9530,rna-TAV2_LOCUS9531,rna-TAV2_LOCUS9532,rna-TAV2_LOCUS9820;TA868:rna-TAV2_LOCUS7331,rna-TAV2_LOCUS5351 | AT3G21690||AT1G61890||AT1G11670 | MATE efflux family protein | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0015297|antiporter activity;GO:0006499|N-terminal protein myristoylation | rna-TAV2_LOCUS1072 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA219:rna-TAV2_LOCUS14565,rna-TAV2_LOCUS13694,rna-TAV2_LOCUS13693,rna-TAV2_LOCUS13403;TA668:rna-TAV2_LOCUS2376,rna-TAV2_LOCUS2375 | AT2G31760||AT2G31510||AT1G05890||AT1G05880||AT1G65430 | nucleic acid binding / protein binding / structural molecule/ zinc ion binding||zinc finger protein-related||IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7) | GO:0005923|tight junction;GO:0003676|nucleic acid binding;GO:0005515|protein binding;GO:0005198|structural molecule activity;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0004842|ubiquitin-protein ligase activity;GO:0008150|biological_process | rna-TAV2_LOCUS16392 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA229:rna-TAV2_LOCUS16157,rna-TAV2_LOCUS16151,rna-TAV2_LOCUS16154,rna-TAV2_LOCUS16153;TA442:rna-TAV2_LOCUS14523,rna-TAV2_LOCUS14522,rna-TAV2_LOCUS14525 | AT3G55130||AT3G55110||AT3G55100||AT3G55090||AT2G39350 | ATWBC19; ATWBC19 (White-Brown Complex homolog 19); ATPase, coupled to transmembrane movement of substances||ATPase, coupled to transmembrane movement of substances||ABC transporter family protein | GO:0042891|antibiotic transport;GO:0016020|membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005775|vacuolar lumen;GO:0005886|plasma membrane;GO:0009624|response to nematode;GO:0006810|transport;GO:0007034|vacuolar transport | - | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA231:rna-TAV2_LOCUS16517,rna-TAV2_LOCUS16518,rna-TAV2_LOCUS16515,rna-TAV2_LOCUS16516;TA308:rna-TAV2_LOCUS1808,rna-TAV2_LOCUS1809,rna-TAV2_LOCUS2577 | AT1G78340||AT1G78360||AT1G78370||AT1G78380||AT1G17190||AT1G17180||AT1G17170 | ATGSTU22; ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase||ATGSTU24, GST; ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24); glutathione binding / glutathione transferase||ATGSTU25; ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase||ATGSTU26, GSTU26; ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26); glutathione transferase||ATGSTU20; ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20); glutathione transferase||ATGSTU21; ATGSTU21 (GLUTATHIONE S-TRANSFERASE TAU 21); glutathione transferase||ATGSTU19, GST8; ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase | GO:0046686|response to cadmium ion;GO:0043295|glutathione binding;GO:0042631|cellular response to water deprivation;GO:0005737|cytoplasm;GO:0048046|apoplast;GO:0005886|plasma membrane;GO:0009409|response to cold;GO:0004364|glutathione transferase activity;GO:0009570|chloroplast stroma;GO:0009407|toxin catabolic process;GO:0009507|chloroplast;GO:0006979|response to oxidative stress;GO:0009635|response to herbicide | - | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA405:rna-TAV2_LOCUS9104,rna-TAV2_LOCUS9107,rna-TAV2_LOCUS9106;TA1023:rna-TAV2_LOCUS9265,rna-TAV2_LOCUS9263 | AT3G20160||AT2G18640||AT2G18620||AT4G36810||AT2G23800 | GGPS4; GGPS4 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 4); farnesyltranstransferase||GGPS1; GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1); farnesyltranstransferase||geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative||GGPS2, GGPS5; GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2); farnesyltranstransferase | GO:0004311|farnesyltranstransferase activity;GO:0009513|etioplast;GO:0008299|isoprenoid biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0009507|chloroplast | rna-TAV2_LOCUS24231,rna-TAV2_LOCUS14240 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA596:rna-TAV2_LOCUS8643,rna-TAV2_LOCUS8641,rna-TAV2_LOCUS8642;TA604:rna-TAV2_LOCUS18414,rna-TAV2_LOCUS18413,rna-TAV2_LOCUS18415 | AT3G21760||AT3G21750||AT1G07250||AT3G21790 | UGT71C4; UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4); quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein||UGT71B1; UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS12141 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA600:rna-TAV2_LOCUS12058,rna-TAV2_LOCUS12059,rna-TAV2_LOCUS12060;TA609:rna-TAV2_LOCUS4422,rna-TAV2_LOCUS4423,rna-TAV2_LOCUS4421 | AT1G17170||AT1G78380||AT1G17180 | ATGSTU24, GST; ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24); glutathione binding / glutathione transferase||ATGSTU19, GST8; ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase||ATGSTU25; ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25); glutathione transferase | GO:0043295|glutathione binding;GO:0046686|response to cadmium ion;GO:0042631|cellular response to water deprivation;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0004364|glutathione transferase activity;GO:0009570|chloroplast stroma;GO:0009407|toxin catabolic process;GO:0009507|chloroplast;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS8230 | 7 | 2 | Thlaspi arvense | Tarvense | |||
| TA1536:rna-TAV2_LOCUS23591,rna-TAV2_LOCUS24079;TA1553:rna-TAV2_LOCUS24011,rna-TAV2_LOCUS24012;TA1561:rna-TAV2_LOCUS24156,rna-TAV2_LOCUS25788 | AT5G40880 | WD-40 repeat family protein / zfwd3 protein (ZFWD3) | GO:0008270|zinc ion binding;GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS25899 | 7 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT3G17820||AT5G37600||AT1G48470||AT5G16570||AT5G35630 | GS2, GLN2, ATGSL1; GS2 (GLUTAMINE SYNTHETASE 2); glutamate-ammonia ligase||ATGSR1, GLN1;1, GSR 1; ATGSR1; copper ion binding / glutamate-ammonia ligase||ATGSKB6, GLN1.3, GLN1;3; ATGSKB6; copper ion binding / glutamate-ammonia ligase||GLN1;5; GLN1;5 (glutamine synthetase 1;5); glutamate-ammonia ligase||GLN1;4; GLN1;4; glutamate-ammonia ligase | GO:0042128|nitrate assimilation;GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0009535|chloroplast thylakoid membrane;GO:0005886|plasma membrane;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0006542|glutamine biosynthetic process;GO:0004356|glutamate-ammonia ligase activity;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0019676|ammonia assimilation cycle;GO:0006807|nitrogen compound metabolic process;GO:0016020|membrane;GO:0009941|chloroplast envelope;GO:0009570|chloroplast stroma;GO:0009651|response to salt stress;GO:0005507|copper ion binding;GO:0007568|aging;GO:0048046|apoplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS10007,rna-TAV2_LOCUS23522,rna-TAV2_LOCUS1247,rna-TAV2_LOCUS15695,rna-TAV2_LOCUS18729,rna-TAV2_LOCUS25336 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G78570||AT1G63000||AT1G53500||AT3G14790 | MUM4, RHM2, ATRHM2, ATMUM4; MUM4 (MUCILAGE-MODIFIED 4); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic||RHM3, ATRHM3; RHM3 (RHAMNOSE BIOSYNTHESIS 3); UDP-L-rhamnose synthase/ catalytic||NRS/ER, UER1; NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE); UDP-4-keto-6-deoxy-glucose-3,5-epimerase/ UDP-4-keto-rhamnose-4-keto-reductase/ dTDP-4-dehydrorhamnose 3,5-epimerase/ dTDP-4-dehydrorhamnose reductase||RHM1, ROL1, ATRHM1; RHM1 (RHAMNOSE BIOSYNTHESIS 1); UDP-L-rhamnose synthase/ UDP-glucose 4,6-dehydratase/ catalytic | GO:0051555|flavonol biosynthetic process;GO:0010192|mucilage biosynthetic process;GO:0010280|UDP-L-rhamnose synthase activity;GO:0008831|dTDP-4-dehydrorhamnose reductase activity;GO:0003824|catalytic activity;GO:0019305|dTDP-rhamnose biosynthetic process;GO:0008830|dTDP-4-dehydrorhamnose 3,5-epimerase activity;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0050377|UDP-glucose 4,6-dehydratase activity;GO:0010490|UDP-4-keto-rhamnose-4-keto-reductase activity;GO:0010315|auxin efflux;GO:0010253|UDP-rhamnose biosynthetic process;GO:0010214|seed coat development;GO:0009225|nucleotide-sugar metabolic process;GO:0010489|UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity;GO:0005625|soluble fraction | rna-TAV2_LOCUS1006,rna-TAV2_LOCUS17639,rna-TAV2_LOCUS1611,rna-TAV2_LOCUS6640,rna-TAV2_LOCUS3635,rna-TAV2_LOCUS9729 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G18820||AT1G49300||AT1G52280||AT4G09720||AT1G22740 | RAB7, ATRABG3B, RAB75, RABG3B; RABG3B; GTP binding||ATRAB7, ATRABG3E, RABG3E; RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding||ATRABG3A; Ras-related GTP-binding protein, putative||ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B; ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding||AtRABG3d; AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding | GO:0005773|vacuole;GO:0003924|GTPase activity;GO:0006913|nucleocytoplasmic transport;GO:0005515|protein binding;GO:0006886|intracellular protein transport;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005525|GTP binding;GO:0015031|protein transport;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS10070,rna-TAV2_LOCUS1148,rna-TAV2_LOCUS2424,rna-TAV2_LOCUS16796,rna-TAV2_LOCUS21121,rna-TAV2_LOCUS3779 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G01690||AT1G66900||AT5G38220||AT5G14390 | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: hydrolase (TAIR:AT5G38220.3); Has 2819 Blast hits to 2817 proteins in 490 species: Archae - 0; Bacteria - 727; Metazoa - 524; Fungi - 119; Plants - 148; Viruses - 6; Other Eukaryotes - 1295 (source: NCBI BLink).||EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14390.1); Has 2954 Blast hits to 2948 proteins in 496 species: Archae - 2; Bacteria - 741; Metazoa - 618; Fungi - 134; Plants - 170; Viruses - 6; Other Eukaryotes - 1283 (source: NCBI BLink).||hydrolase||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 2904 Blast hits to 2898 proteins in 507 species: Archae - 0; Bacteria - 766; Metazoa - 578; Fungi - 129; Plants - 154; Viruses - 6; Other Eukaryotes - 1271 (source: NCBI BLink). | ;GO:0003674|molecular_function;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0016787|hydrolase activity | rna-TAV2_LOCUS11338,rna-TAV2_LOCUS17353,rna-TAV2_LOCUS23766,rna-TAV2_LOCUS8175,rna-TAV2_LOCUS8174,rna-TAV2_LOCUS21459 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G23210||AT4G14410 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | rna-TAV2_LOCUS11399,rna-TAV2_LOCUS7984,rna-TAV2_LOCUS13181,rna-TAV2_LOCUS9284,rna-TAV2_LOCUS21322,rna-TAV2_LOCUS25848 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G02550||AT3G49940||AT5G67420||AT4G37540 | LBD38; LBD38 (LOB DOMAIN-CONTAINING PROTEIN 38)||LBD39; LBD39 (LOB DOMAIN-CONTAINING PROTEIN 39)||LBD41; LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41)||LBD37; LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37) | GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS11685,rna-TAV2_LOCUS4824,rna-TAV2_LOCUS15606,rna-TAV2_LOCUS7893,rna-TAV2_LOCUS22510,rna-TAV2_LOCUS8625 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G33950||AT5G63650||AT1G10930||AT1G10940||AT1G78290||AT5G08590 | ATSGS1, RECQ4A, ATRECQ4A; RECQ4A; ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding||ASK2, SNRK2-1, SNRK2.1, SRK2G; SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1); kinase/ protein kinase||OST1, SNRK2-6, SRK2E, SNRK2.6, P44; OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase||ASK1, SNRK2-4, SNRK2.4, SRK2A; SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4); kinase||SNRK2-5, SNRK2.5, SRK2H; SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5); kinase||serine/threonine protein kinase, putative | GO:0006800|oxygen and reactive oxygen species metabolic process;GO:0005829|cytosol;GO:0003676|nucleic acid binding;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0000724|double-strand break repair via homologous recombination;GO:0009737|response to abscisic acid stimulus;GO:0009738|abscisic acid mediated signaling pathway;GO:0006970|response to osmotic stress;GO:0009931|calcium-dependent protein serine/threonine kinase activity;GO:0005737|cytoplasm;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0004386|helicase activity;GO:0042742|defense response to bacterium;GO:0016301|kinase activity;GO:0019432|triglyceride biosynthetic process;GO:0051276|chromosome organization;GO:0048366|leaf development;GO:0005622|intracellular;GO:0009414|response to water deprivation;GO:0006974|response to DNA damage stimulus;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0004674|protein serine/threonine kinase activity;GO:0005985|sucrose metabolic process;GO:0008026|ATP-dependent helicase activity;GO:0010118|stomatal movement;GO:0010119|regulation of stomatal movement;GO:0005524|ATP binding;GO:0040007|growth | rna-TAV2_LOCUS12169,rna-TAV2_LOCUS5648,rna-TAV2_LOCUS1251,rna-TAV2_LOCUS7544,rna-TAV2_LOCUS16948,rna-TAV2_LOCUS19498 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G44590||AT3G60190||AT5G42080||AT3G61760||AT1G14830 | ADL4, ADLP2, EDR3, DRP1E, ADL1E; ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase||ADL1, ADL1A, AG68, DRP1A, RSW9; ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein binding||ADL1C, ADL5, DRP1C; ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase||ADL1B; ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B); GTP binding / GTPase||ADL1D; ADL1D (ARABIDOPSIS DYNAMIN-RELATED PROTEIN 1D); GTP binding / GTPase | GO:0005773|vacuole;GO:0048488|synaptic vesicle endocytosis;GO:0009535|chloroplast thylakoid membrane;GO:0046686|response to cadmium ion;GO:0005515|protein binding;GO:0005525|GTP binding;GO:0005886|plasma membrane;GO:0009793|embryonic development ending in seed dormancy;GO:0009504|cell plate;GO:0008150|biological_process;GO:0005874|microtubule;GO:0010152|pollen maturation;GO:0007005|mitochondrion organization;GO:0016020|membrane;GO:0010051|xylem and phloem pattern formation;GO:0009920|cell plate formation involved in plant-type cell wall biogenesis;GO:0005938|cell cortex;GO:0010091|trichome branching;GO:0003924|GTPase activity;GO:0000911|cytokinesis by cell plate formation;GO:0030276|clathrin binding;GO:0005575|cellular_component;GO:0045334|clathrin-coated endocytic vesicle;GO:0000266|mitochondrial fission | rna-TAV2_LOCUS12315,rna-TAV2_LOCUS15614,rna-TAV2_LOCUS15060,rna-TAV2_LOCUS25943,rna-TAV2_LOCUS16242,rna-TAV2_LOCUS523 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G44610||AT5G10260||AT2G22290||AT4G39890||AT5G64990 | AtRABH1c; AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding / protein binding||RAB6, ATRABH1B, ATRAB6A, RAB6A; RAB6A; GTP binding / protein binding||AtRABH1e; AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding||AtRABH1a; AtRABH1a (Arabidopsis Rab GTPase homolog H1a); GTP binding||ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6; ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP binding | GO:0005515|protein binding;GO:0005624|membrane fraction;GO:0005886|plasma membrane;GO:0032940|secretion by cell;GO:0005525|GTP binding;GO:0015031|protein transport;GO:0012505|endomembrane system;GO:0005739|mitochondrion | rna-TAV2_LOCUS12316,rna-TAV2_LOCUS18660,rna-TAV2_LOCUS12756,rna-TAV2_LOCUS4467,rna-TAV2_LOCUS25044,rna-TAV2_LOCUS6899 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G36000||AT3G53450||AT2G28305||AT4G35190||AT5G06300 | mitochondrial transcription termination factor-related / mTERF-related||carboxy-lyase||unknown protein | GO:0005829|cytosol;GO:0003674|molecular_function;GO:0016831|carboxy-lyase activity;GO:0008152|metabolic process;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0009089|lysine biosynthetic process via diaminopimelate | rna-TAV2_LOCUS12426,rna-TAV2_LOCUS14865,rna-TAV2_LOCUS14680,rna-TAV2_LOCUS25396,rna-TAV2_LOCUS16421,rna-TAV2_LOCUS20238 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G38620||AT3G54180||AT1G20930||AT1G76540 | CDC2B, CDKB1;1; CDKB1;1 (CYCLIN-DEPENDENT KINASE B1;1); cyclin-dependent protein kinase/ kinase/ protein binding||CDKB2;2; CDKB2;2 (CYCLIN-DEPENDENT KINASE B2;2); cyclin-dependent protein kinase/ kinase||CDKB1;2; CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase||CDKB2;1; CDKB2;1 (cyclin-dependent kinase B2;1); cyclin-dependent protein kinase/ kinase/ protein binding | GO:0051726|regulation of cell cycle;GO:0005515|protein binding;GO:0009826|unidimensional cell growth;GO:0009934|regulation of meristem structural organization;GO:0030332|cyclin binding;GO:0005737|cytoplasm;GO:0048825|cotyledon development;GO:0000087|M phase of mitotic cell cycle;GO:0010376|stomatal complex formation;GO:0016301|kinase activity;GO:0000307|cyclin-dependent protein kinase holoenzyme complex;GO:0009755|hormone-mediated signaling pathway;GO:0016572|histone phosphorylation;GO:0042023|DNA endoreduplication;GO:0010389|regulation of G2/M transition of mitotic cell cycle;GO:0005634|nucleus;GO:0004693|cyclin-dependent protein kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0010583|response to cyclopentenone;GO:0000086|G2/M transition of mitotic cell cycle;GO:0007346|regulation of mitotic cell cycle | rna-TAV2_LOCUS12686,rna-TAV2_LOCUS17121,rna-TAV2_LOCUS8656,rna-TAV2_LOCUS288,rna-TAV2_LOCUS16826,rna-TAV2_LOCUS1748 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G28720 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS14307,rna-TAV2_LOCUS7650,rna-TAV2_LOCUS14652,rna-TAV2_LOCUS2526,rna-TAV2_LOCUS24129,rna-TAV2_LOCUS7651 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G28760||AT5G59290||AT2G47650||AT3G62830||AT3G46440||AT3G53520 | UXS1, ATUXS1; UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1); UDP-glucuronate decarboxylase/ catalytic||UXS5; UXS5; UDP-glucuronate decarboxylase/ catalytic||UXS6; NAD-dependent epimerase/dehydratase family protein||UXS2, ATUXS2, AUD1; AUD1; UDP-glucuronate decarboxylase/ catalytic/ dTDP-glucose 4,6-dehydratase||UXS4; UXS4 (UDP-XYLOSE SYNTHASE 4); UDP-glucuronate decarboxylase/ catalytic||UXS3, ATUXS3; UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3); UDP-glucuronate decarboxylase/ catalytic | GO:0005773|vacuole;GO:0005488|binding;GO:0048040|UDP-glucuronate decarboxylase activity;GO:0005829|cytosol;GO:0003824|catalytic activity;GO:0042732|D-xylose metabolic process;GO:0016020|membrane;GO:0000139|Golgi membrane;GO:0019305|dTDP-rhamnose biosynthetic process;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0008460|dTDP-glucose 4,6-dehydratase activity;GO:0009507|chloroplast;GO:0009225|nucleotide-sugar metabolic process;GO:0044237|cellular metabolic process;GO:0050662|coenzyme binding;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS14528,rna-TAV2_LOCUS18668,rna-TAV2_LOCUS14896,rna-TAV2_LOCUS17663,rna-TAV2_LOCUS18218,rna-TAV2_LOCUS17033 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G42960||AT3G59110||AT1G56720||AT5G18500||AT1G09440 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS14840,rna-TAV2_LOCUS17768,rna-TAV2_LOCUS7004,rna-TAV2_LOCUS20789,rna-TAV2_LOCUS2630,rna-TAV2_LOCUS7005 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G30620||AT4G20460||AT5G44480||AT2G34850 | MEE25; MEE25 (maternal effect embryo arrest 25); UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme binding||DUR; DUR (DEFECTIVE UGE IN ROOT); UDP-glucose 4-epimerase/ binding / catalytic/ coenzyme binding||HSR8, MUR4, UXE1; MUR4 (MURUS 4); UDP-arabinose 4-epimerase/ catalytic||NAD-dependent epimerase/dehydratase family protein | GO:0005488|binding;GO:0019567|arabinose biosynthetic process;GO:0009832|plant-type cell wall biogenesis;GO:0003824|catalytic activity;GO:0050373|UDP-arabinose 4-epimerase activity;GO:0009793|embryonic development ending in seed dormancy;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0006012|galactose metabolic process;GO:0005575|cellular_component;GO:0048868|pollen tube development;GO:0009225|nucleotide-sugar metabolic process;GO:0044237|cellular metabolic process;GO:0050662|coenzyme binding;GO:0005794|Golgi apparatus;GO:0003978|UDP-glucose 4-epimerase activity | rna-TAV2_LOCUS14940,rna-TAV2_LOCUS2751,rna-TAV2_LOCUS23245,rna-TAV2_LOCUS7503,rna-TAV2_LOCUS4817,rna-TAV2_LOCUS4818 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G26865 | - | - | rna-TAV2_LOCUS1498,rna-TAV2_LOCUS2648,rna-TAV2_LOCUS913,rna-TAV2_LOCUS15928,rna-TAV2_LOCUS3745,rna-TAV2_LOCUS1850 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G02130||AT5G47200||AT4G17530||AT3G11730 | ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A; ARA-5 (ARABIDOPSIS RAS 5); GTP binding||ATFP8, ATRABD1, RABD1; ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding||RAB1C, ATRAB1C, ATRABD2C; ATRAB1C; GTP binding||ATRABD2B, ATRAB1A; ATRAB1A; GTP binding | GO:0005773|vacuole;GO:0030742|GTP-dependent protein binding;GO:0046686|response to cadmium ion;GO:0016020|membrane;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0005886|plasma membrane;GO:0005525|GTP binding;GO:0015031|protein transport | rna-TAV2_LOCUS15055,rna-TAV2_LOCUS5053,rna-TAV2_LOCUS22380,rna-TAV2_LOCUS22642,rna-TAV2_LOCUS365,rna-TAV2_LOCUS9424 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G49310||AT4G27720||AT1G64650 | LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 550 Blast hits to 545 proteins in 201 species: Archae - 5; Bacteria - 285; Metazoa - 85; Fungi - 33; Plants - 99; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).||LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64650.1); Has 496 Blast hits to 491 proteins in 183 species: Archae - 5; Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).||LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27720.1); Has 565 Blast hits to 562 proteins in 197 species: Archae - 7; Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0012505|endomembrane system | rna-TAV2_LOCUS15339,rna-TAV2_LOCUS5558,rna-TAV2_LOCUS25741,rna-TAV2_LOCUS7215,rna-TAV2_LOCUS26266,rna-TAV2_LOCUS5556 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G76160||AT1G21860||AT1G41830||AT4G22010 | sks7; sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase||sks4; sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase||sks5; sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase||SKS6; SKS6 (SKU5-SIMILAR 6); pectinesterase | GO:0005507|copper ion binding;GO:0016491|oxidoreductase activity;GO:0016020|membrane;GO:0009505|plant-type cell wall;GO:0048046|apoplast;GO:0005618|cell wall;GO:0030599|pectinesterase activity | rna-TAV2_LOCUS16485,rna-TAV2_LOCUS17344,rna-TAV2_LOCUS3723,rna-TAV2_LOCUS3043,rna-TAV2_LOCUS48,rna-TAV2_LOCUS24042 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G05420||AT4G21100 | DDB1A; DDB1A (DAMAGED DNA BINDING PROTEIN 1A); DNA binding / protein binding||DDB1B; DDB1B (Damaged DNA Binding Protein 1 B); damaged DNA binding / protein binding | GO:0010100|negative regulation of photomorphogenesis;GO:0005515|protein binding;GO:0016481|negative regulation of transcription;GO:0009793|embryonic development ending in seed dormancy;GO:0003684|damaged DNA binding;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS18347,rna-TAV2_LOCUS26312,rna-TAV2_LOCUS21034,rna-TAV2_LOCUS22859,rna-TAV2_LOCUS26310,rna-TAV2_LOCUS26311 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G04340||AT4G22120||AT1G11960||AT1G62320||AT3G21620||AT4G15430 | early-responsive to dehydration protein-related / ERD protein-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: early-responsive to dehydration protein-related / ERD protein-related (TAIR:AT1G62320.1); Has 746 Blast hits to 706 proteins in 111 species: Archae - 0; Bacteria - 4; Metazoa - 131; Fungi - 370; Plants - 224; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: early-responsive to dehydration protein-related / ERD protein-related (TAIR:AT3G21620.1); Has 923 Blast hits to 821 proteins in 135 species: Archae - 0; Bacteria - 0; Metazoa - 164; Fungi - 446; Plants - 258; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0008150|biological_process | rna-TAV2_LOCUS19028,rna-TAV2_LOCUS22541,rna-TAV2_LOCUS597,rna-TAV2_LOCUS7761,rna-TAV2_LOCUS9135,rna-TAV2_LOCUS25367 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G61320 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61330.1); Has 264 Blast hits to 264 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS19992,rna-TAV2_LOCUS7190,rna-TAV2_LOCUS5478,rna-TAV2_LOCUS7940,rna-TAV2_LOCUS5477,rna-TAV2_LOCUS5636 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G08530||AT3G11130 | clathrin heavy chain, putative | GO:0005773|vacuole;GO:0005488|binding;GO:0005515|protein binding;GO:0016020|membrane;GO:0006886|intracellular protein transport;GO:0005198|structural molecule activity;GO:0016192|vesicle-mediated transport;GO:0005886|plasma membrane;GO:0009507|chloroplast | rna-TAV2_LOCUS4777,rna-TAV2_LOCUS4934,rna-TAV2_LOCUS9868,rna-TAV2_LOCUS4935,rna-TAV2_LOCUS8987,rna-TAV2_LOCUS8652 | 6 | 0 | Thlaspi arvense | Tarvense | |||
| TA103:rna-TAV2_LOCUS1038,rna-TAV2_LOCUS1031,rna-TAV2_LOCUS2599,rna-TAV2_LOCUS2603,rna-TAV2_LOCUS2605 | AT4G30990 | binding | GO:0005488|binding;GO:0005794|Golgi apparatus;GO:0008150|biological_process | rna-TAV2_LOCUS1032 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA113:rna-TAV2_LOCUS3739,rna-TAV2_LOCUS1723,rna-TAV2_LOCUS1721,rna-TAV2_LOCUS1718,rna-TAV2_LOCUS1716 | AT1G50400||AT3G20000 | TOM40; TOM40; P-P-bond-hydrolysis-driven protein transmembrane transporter/ voltage-gated anion channel||porin family protein | GO:0005742|mitochondrial outer membrane translocase complex;GO:0015450|P-P-bond-hydrolysis-driven protein transmembrane transporter activity;GO:0005743|mitochondrial inner membrane;GO:0005886|plasma membrane;GO:0006626|protein targeting to mitochondrion;GO:0005741|mitochondrial outer membrane;GO:0005739|mitochondrion;GO:0006820|anion transport;GO:0008308|voltage-gated anion channel activity | rna-TAV2_LOCUS10252 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA1172:rna-TAV2_LOCUS14925,rna-TAV2_LOCUS14738 | AT2G31960||AT1G05570||AT5G13000 | ATGSL03, GSL03, ATGSL3; ATGSL03 (GLUCAN SYNTHASE-LIKE 3); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups||CALS1, GSL06, ATGSL6, ATGSL06, GSL6; CALS1 (CALLOSE SYNTHASE 1); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups||ATGSL12, gsl12; ATGSL12 (glucan synthase-like 12); 1,3-beta-glucan synthase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0000148|1,3-beta-glucan synthase complex;GO:0006075|1,3-beta-glucan biosynthetic process;GO:0005886|plasma membrane;GO:0009504|cell plate;GO:0003843|1,3-beta-glucan synthase activity | rna-TAV2_LOCUS323,rna-TAV2_LOCUS22324,rna-TAV2_LOCUS18346,rna-TAV2_LOCUS18339 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA1202:rna-TAV2_LOCUS15733,rna-TAV2_LOCUS18014 | AT1G73460||AT1G73670||AT3G18040||AT1G18150||AT5G19010||AT1G53510 | ATMPK15; ATMPK15; MAP kinase/ kinase||protein kinase family protein||MPK9; MPK9 (MAP KINASE 9); MAP kinase||ATMPK8; ATMPK8; MAP kinase||ATMPK18; ATMPK18; MAP kinase||MPK16; MPK16; MAP kinase | GO:0005773|vacuole;GO:0004707|MAP kinase activity;GO:0016301|kinase activity;GO:0005829|cytosol;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0005737|cytoplasm;GO:0007165|signal transduction;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005739|mitochondrion;GO:0043622|cortical microtubule organization | rna-TAV2_LOCUS10701,rna-TAV2_LOCUS1634,rna-TAV2_LOCUS18731,rna-TAV2_LOCUS3636 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA120:rna-TAV2_LOCUS7225,rna-TAV2_LOCUS5926,rna-TAV2_LOCUS7224,rna-TAV2_LOCUS5925,rna-TAV2_LOCUS6057 | AT5G61190||AT5G61180||AT3G62200 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 3380 Blast hits to 2820 proteins in 272 species: Archae - 0; Bacteria - 93; Metazoa - 1555; Fungi - 720; Plants - 473; Viruses - 42; Other Eukaryotes - 497 (source: NCBI BLink).||zinc finger protein-related | GO:0003674|molecular_function;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast | rna-TAV2_LOCUS15847 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA1235:rna-TAV2_LOCUS16612,rna-TAV2_LOCUS15363 | AT3G62060||AT2G46930 | pectinacetylesterase, putative||pectinacetylesterase family protein | GO:0012505|endomembrane system;GO:0004091|carboxylesterase activity;GO:0008150|biological_process | rna-TAV2_LOCUS14438,rna-TAV2_LOCUS25316,rna-TAV2_LOCUS17030,rna-TAV2_LOCUS19748 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA1256:rna-TAV2_LOCUS16968,rna-TAV2_LOCUS18119 | - | - | - | rna-TAV2_LOCUS5227,rna-TAV2_LOCUS9173,rna-TAV2_LOCUS25514,rna-TAV2_LOCUS9293 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA127:rna-TAV2_LOCUS8900,rna-TAV2_LOCUS8897,rna-TAV2_LOCUS8898,rna-TAV2_LOCUS8896,rna-TAV2_LOCUS9759 | AT5G01750 | unknown protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS21252 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA144:rna-TAV2_LOCUS19114,rna-TAV2_LOCUS19115,rna-TAV2_LOCUS19116,rna-TAV2_LOCUS19117,rna-TAV2_LOCUS19118 | AT5G10770 | chloroplast nucleoid DNA-binding protein, putative | GO:0006508|proteolysis;GO:0003677|DNA binding | rna-TAV2_LOCUS22961 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA149:rna-TAV2_LOCUS21725,rna-TAV2_LOCUS21724,rna-TAV2_LOCUS22218,rna-TAV2_LOCUS22219,rna-TAV2_LOCUS22216 | AT4G11320 | cysteine proteinase, putative | GO:0012505|endomembrane system;GO:0006508|proteolysis | rna-TAV2_LOCUS21723 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA153:rna-TAV2_LOCUS23343,rna-TAV2_LOCUS24517,rna-TAV2_LOCUS24546,rna-TAV2_LOCUS25645,rna-TAV2_LOCUS25646 | AT5G39450||AT5G39500||AT5G39460 | F-box family protein||pattern formation protein, putative | GO:0003674|molecular_function;GO:0005622|intracellular;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005086|ARF guanyl-nucleotide exchange factor activity | rna-TAV2_LOCUS25327 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA157:rna-TAV2_LOCUS24996,rna-TAV2_LOCUS24997,rna-TAV2_LOCUS24993,rna-TAV2_LOCUS23615,rna-TAV2_LOCUS23614 | AT4G19590||AT4G19570||AT5G37760 | DNAJ heat shock N-terminal domain-containing protein | GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding;GO:0051082|unfolded protein binding | rna-TAV2_LOCUS24994 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA158:rna-TAV2_LOCUS25066,rna-TAV2_LOCUS25074,rna-TAV2_LOCUS25072,rna-TAV2_LOCUS25070,rna-TAV2_LOCUS25068 | AT5G41200 | AGL75; AGL75 (AGAMOUS-LIKE 75); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding | rna-TAV2_LOCUS25784 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA166:rna-TAV2_LOCUS4122,rna-TAV2_LOCUS4121,rna-TAV2_LOCUS4120,rna-TAV2_LOCUS4119,rna-TAV2_LOCUS4123 | AT3G01190||AT1G05240 | peroxidase, putative||peroxidase 27 (PER27) (P27) (PRXR7) | GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS11917 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA179:rna-TAV2_LOCUS5092,rna-TAV2_LOCUS5091,rna-TAV2_LOCUS5089,rna-TAV2_LOCUS7097 | AT5G47590 | heat shock protein-related | GO:0006508|proteolysis;GO:0005575|cellular_component | rna-TAV2_LOCUS5543,rna-TAV2_LOCUS5323 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA187:rna-TAV2_LOCUS6138,rna-TAV2_LOCUS6137,rna-TAV2_LOCUS6136,rna-TAV2_LOCUS6135 | AT5G43690 | sulfotransferase family protein | GO:0008146|sulfotransferase activity;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS772,rna-TAV2_LOCUS21 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA207:rna-TAV2_LOCUS9873,rna-TAV2_LOCUS10976,rna-TAV2_LOCUS10374,rna-TAV2_LOCUS11150 | ATCG00530||ATCG00540 | YCF10; hypothetical protein||PETA; Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. | GO:0016020|membrane;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0009579|thylakoid;GO:0009507|chloroplast | rna-TAV2_LOCUS25928,rna-TAV2_LOCUS728 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA208:rna-TAV2_LOCUS9903,rna-TAV2_LOCUS10494,rna-TAV2_LOCUS11374,rna-TAV2_LOCUS11373 | ATCG01130||ATCG01000||ATMG00370 | YCF1.1; hypothetical protein||YCF1.2; hypothetical protein||ORF199; hypothetical protein | GO:0009507|chloroplast;GO:0012505|endomembrane system;GO:0016020|membrane | rna-TAV2_LOCUS10973,rna-TAV2_LOCUS8740 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA242:rna-TAV2_LOCUS18637,rna-TAV2_LOCUS18630,rna-TAV2_LOCUS18631,rna-TAV2_LOCUS21103 | AT1G49390||AT5G20400||AT5G54000 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016491|oxidoreductase activity;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009813|flavonoid biosynthetic process;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS7526,rna-TAV2_LOCUS20887 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA256:rna-TAV2_LOCUS21187,rna-TAV2_LOCUS21185,rna-TAV2_LOCUS21184,rna-TAV2_LOCUS21183 | AT4G00620 | tetrahydrofolate dehydrogenase/cyclohydrolase, putative | GO:0005488|binding;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0009396|folic acid and derivative biosynthetic process | rna-TAV2_LOCUS17168,rna-TAV2_LOCUS5261 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA279:rna-TAV2_LOCUS4660,rna-TAV2_LOCUS4659,rna-TAV2_LOCUS4658,rna-TAV2_LOCUS4657 | AT3G57270||AT4G16260 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BG1; BG1 (BETA-1,3-GLUCANASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0005618|cell wall;GO:0009817|defense response to fungus, incompatible interaction;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009651|response to salt stress;GO:0043169|cation binding | rna-TAV2_LOCUS8279,rna-TAV2_LOCUS4219 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA333:rna-TAV2_LOCUS4039,rna-TAV2_LOCUS4034,rna-TAV2_LOCUS4035 | AT2G34420||AT5G54270||AT3G27690||AT2G05070 | LHB1B2, LHCB1.5; LHB1B2; chlorophyll binding||LHCB2.4, LHCB2.3, LHCB2; LHCB2.3; chlorophyll binding||LHCB3, LHCB3*1; LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule||LHCB2.2, LHCB2; LHCB2.2; chlorophyll binding | GO:0010287|plastoglobule;GO:0015979|photosynthesis;GO:0010218|response to far red light;GO:0009535|chloroplast thylakoid membrane;GO:0016020|membrane;GO:0009765|photosynthesis, light harvesting;GO:0005198|structural molecule activity;GO:0030076|light-harvesting complex;GO:0009941|chloroplast envelope;GO:0016168|chlorophyll binding;GO:0009637|response to blue light;GO:0005886|plasma membrane;GO:0009579|thylakoid;GO:0010114|response to red light;GO:0009507|chloroplast | rna-TAV2_LOCUS20368,rna-TAV2_LOCUS5699,rna-TAV2_LOCUS8823 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA450:rna-TAV2_LOCUS15653,rna-TAV2_LOCUS15655,rna-TAV2_LOCUS15656 | AT1G52950 | replication protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS14223,rna-TAV2_LOCUS2512,rna-TAV2_LOCUS107 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA71:rna-TAV2_LOCUS1039,rna-TAV2_LOCUS1036,rna-TAV2_LOCUS1033,rna-TAV2_LOCUS2598,rna-TAV2_LOCUS2600,rna-TAV2_LOCUS2601 | AT1G27030||AT1G27020 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA73:rna-TAV2_LOCUS2498,rna-TAV2_LOCUS2499,rna-TAV2_LOCUS2500,rna-TAV2_LOCUS2501,rna-TAV2_LOCUS2502,rna-TAV2_LOCUS2503 | AT1G22340||AT1G22360||AT1G22370||AT1G22380||AT1G22400 | UGT85A1, ATUGT85A1; UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||AtUGT85A7; AtUGT85A7 (UDP-glucosyl transferase 85A7); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A2; AtUGT85A2 (UDP-glucosyl transferase 85A2); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups||AtUGT85A3; AtUGT85A3 (UDP-glucosyl transferase 85A3); glucuronosyltransferase/ transcription factor/ transferase, transferring glycosyl groups||AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0015020|glucuronosyltransferase activity;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA74:rna-TAV2_LOCUS3925,rna-TAV2_LOCUS3932,rna-TAV2_LOCUS2369,rna-TAV2_LOCUS2368,rna-TAV2_LOCUS2363,rna-TAV2_LOCUS2365 | AT1G23520||AT1G23600||AT2G27670||AT1G23640 | unknown protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA752:rna-TAV2_LOCUS926,rna-TAV2_LOCUS2505 | AT1G22300||AT1G78300||AT2G42590||AT1G26480||AT1G34760 | GRF10, 14-3-3EPSILON, GF14 EPSILON; GRF10 (GENERAL REGULATORY FACTOR 10); ATP binding / protein binding / protein phosphorylated amino acid binding||GRF2, 14-3-3OMEGA, GF14 OMEGA; GRF2 (GENERAL REGULATORY FACTOR 2); protein binding / protein phosphorylated amino acid binding||GRF11, GF14 OMICRON; GRF11 (GENERAL REGULATORY FACTOR 11); ATPase binding / amino acid binding / protein binding / protein phosphorylated amino acid binding||GRF9, GF14 MU; GRF9 (GENERAL REGULATORY FACTOR 9); calcium ion binding / protein binding / protein phosphorylated amino acid binding||GRF12, GF14 IOTA; GRF12 (GENERAL REGULATORY FACTOR 12); protein binding / protein phosphorylated amino acid binding | GO:0005773|vacuole;GO:0005515|protein binding;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0005737|cytoplasm;GO:0005509|calcium ion binding;GO:0009570|chloroplast stroma;GO:0005575|cellular_component;GO:0016597|amino acid binding;GO:0045309|protein phosphorylated amino acid binding;GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0051117|ATPase binding | rna-TAV2_LOCUS14601,rna-TAV2_LOCUS2665,rna-TAV2_LOCUS3269,rna-TAV2_LOCUS16947 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA77:rna-TAV2_LOCUS923,rna-TAV2_LOCUS2489,rna-TAV2_LOCUS2487,rna-TAV2_LOCUS2488,rna-TAV2_LOCUS2493,rna-TAV2_LOCUS2494 | AT1G29510||AT1G29450 | auxin-responsive protein, putative||SAUR68; SAUR68 (SMALL AUXIN UPREGULATED 68) | GO:0009733|response to auxin stimulus;GO:0003674|molecular_function | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA78:rna-TAV2_LOCUS5366,rna-TAV2_LOCUS5371,rna-TAV2_LOCUS5370,rna-TAV2_LOCUS5369,rna-TAV2_LOCUS7342,rna-TAV2_LOCUS6791 | AT5G44440||AT5G44400||AT5G44390||AT1G10095||AT5G44360 | protein prenyltransferase||FAD-binding domain-containing protein | GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0050660|FAD binding;GO:0005618|cell wall;GO:0005575|cellular_component;GO:0009055|electron carrier activity | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA79:rna-TAV2_LOCUS6014,rna-TAV2_LOCUS6015,rna-TAV2_LOCUS6022,rna-TAV2_LOCUS6023,rna-TAV2_LOCUS6020,rna-TAV2_LOCUS6021 | AT3G28580||AT3G28570||AT3G28510||AT3G28540 | AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0009737|response to abscisic acid stimulus;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0000166|nucleotide binding | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA80:rna-TAV2_LOCUS6561,rna-TAV2_LOCUS6562,rna-TAV2_LOCUS7749,rna-TAV2_LOCUS7748,rna-TAV2_LOCUS7755,rna-TAV2_LOCUS7754 | AT2G02360||AT2G02310||AT2G02240||AT2G02250||AT2G02230 | AtPP2-B6; AtPP2-B6 (Phloem protein 2-B6); carbohydrate binding||AtPP2-B2; AtPP2-B2 (Phloem protein 2-B2); carbohydrate binding||AtPP2-B1; AtPP2-B1 (Phloem protein 2-B1); carbohydrate binding||AtPP2-B10; AtPP2-B10 (Phloem protein 2-B10); carbohydrate binding||MEE66; MEE66 (maternal effect embryo arrest 66) | GO:0003674|molecular_function;GO:0030246|carbohydrate binding;GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006499|N-terminal protein myristoylation | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA817:rna-TAV2_LOCUS6485,rna-TAV2_LOCUS6482 | AT1G43170||AT1G61580 | ARP1, emb2207, RPL3A; ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of ribosome||RPL3B, ARP2; RPL3B (R-PROTEIN L3 B); structural constituent of ribosome | GO:0005773|vacuole;GO:0005840|ribosome;GO:0006412|translation;GO:0016020|membrane;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0009793|embryonic development ending in seed dormancy;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS7777,rna-TAV2_LOCUS7443,rna-TAV2_LOCUS8921,rna-TAV2_LOCUS8922 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA81:rna-TAV2_LOCUS7804,rna-TAV2_LOCUS5448,rna-TAV2_LOCUS7802,rna-TAV2_LOCUS7803,rna-TAV2_LOCUS7806,rna-TAV2_LOCUS5451 | AT2G03260||AT2G03240 | EXS family protein / ERD1/XPR1/SYG1 family protein||LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14040.1); Has 764 Blast hits to 738 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 250; Plants - 154; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). | GO:0016021|integral to membrane | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA837:rna-TAV2_LOCUS6861,rna-TAV2_LOCUS6862 | AT3G26030||AT1G13460||AT3G09880||AT4G15415||AT3G21650 | ATB' GAMMA; ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator||serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative||ATB' BETA; ATB' BETA; protein phosphatase type 2A regulator||ATB' DELTA; ATB' DELTA; protein phosphatase type 2A regulator | GO:0008601|protein phosphatase type 2A regulator activity;GO:0005777|peroxisome;GO:0005730|nucleolus;GO:0007165|signal transduction;GO:0005737|cytoplasm;GO:0008266|poly(U) RNA binding;GO:0005739|mitochondrion;GO:0000159|protein phosphatase type 2A complex | rna-TAV2_LOCUS1858,rna-TAV2_LOCUS10014,rna-TAV2_LOCUS25082,rna-TAV2_LOCUS9533 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA85:rna-TAV2_LOCUS13375,rna-TAV2_LOCUS13376,rna-TAV2_LOCUS14407,rna-TAV2_LOCUS14406,rna-TAV2_LOCUS14405,rna-TAV2_LOCUS14404 | AT4G38940 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA87:rna-TAV2_LOCUS13467,rna-TAV2_LOCUS13468,rna-TAV2_LOCUS13886,rna-TAV2_LOCUS13885,rna-TAV2_LOCUS13890,rna-TAV2_LOCUS13889 | AT2G45580||AT2G45570||AT1G33720||AT2G45550 | CYP76C2; CYP76C2; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C4; CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C6; CYP76C6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C3; CYP76C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA90:rna-TAV2_LOCUS16474,rna-TAV2_LOCUS16470,rna-TAV2_LOCUS16468,rna-TAV2_LOCUS16469,rna-TAV2_LOCUS16785,rna-TAV2_LOCUS16784 | AT3G50180||AT3G50170||AT3G50130||AT3G50120 | unknown protein | GO:0003674|molecular_function;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA923:rna-TAV2_LOCUS10129,rna-TAV2_LOCUS10130 | AT2G16510||AT1G19910 | vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)||AVA-P2, AVA-2PE, ATVHA-C2; AVA-P2; ATPase/ proton-transporting ATPase, rotational mechanism | GO:0005773|vacuole;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0016887|ATPase activity;GO:0005886|plasma membrane;GO:0000220|vacuolar proton-transporting V-type ATPase, V0 domain;GO:0015986|ATP synthesis coupled proton transport | rna-TAV2_LOCUS25342,rna-TAV2_LOCUS3244,rna-TAV2_LOCUS18109,rna-TAV2_LOCUS22555 | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA92:rna-TAV2_LOCUS17339,rna-TAV2_LOCUS17340,rna-TAV2_LOCUS16193,rna-TAV2_LOCUS16192,rna-TAV2_LOCUS16187,rna-TAV2_LOCUS18042 | AT1G66700||AT3G44840 | S-adenosyl-L-methionine:carboxyl methyltransferase family protein||PXMT1; PXMT1; S-adenosylmethionine-dependent methyltransferase | GO:0008168|methyltransferase activity;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA96:rna-TAV2_LOCUS20719,rna-TAV2_LOCUS20718,rna-TAV2_LOCUS19207,rna-TAV2_LOCUS20676,rna-TAV2_LOCUS19211,rna-TAV2_LOCUS19212 | AT5G22180||AT5G22160||AT5G22150 | unknown protein | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA97:rna-TAV2_LOCUS22215,rna-TAV2_LOCUS18944,rna-TAV2_LOCUS21328,rna-TAV2_LOCUS21338,rna-TAV2_LOCUS21339,rna-TAV2_LOCUS20432 | AT1G12663 | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. | GO:0006952|defense response | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA98:rna-TAV2_LOCUS24834,rna-TAV2_LOCUS24833,rna-TAV2_LOCUS24836,rna-TAV2_LOCUS24835,rna-TAV2_LOCUS25551,rna-TAV2_LOCUS22537 | AT4G22180||AT4G22170 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 6 | 1 | Thlaspi arvense | Tarvense | |||
| TA1080:rna-TAV2_LOCUS12869,rna-TAV2_LOCUS12868;TA1693:rna-TAV2_LOCUS8468,rna-TAV2_LOCUS8469 | AT2G29500||AT5G59720 | HSP18.2; HSP18.2 (heat shock protein 18.2)||17.6 kDa class I small heat shock protein (HSP17.6B-CI) | GO:0042542|response to hydrogen peroxide;GO:0010286|heat acclimation;GO:0003674|molecular_function;GO:0009644|response to high light intensity;GO:0009408|response to heat;GO:0005575|cellular_component;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS12918,rna-TAV2_LOCUS20706 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA1211:rna-TAV2_LOCUS15957,rna-TAV2_LOCUS15958;TA1708:rna-TAV2_LOCUS4230,rna-TAV2_LOCUS4231 | AT3G47960||AT5G62680||AT5G28470||AT1G18880 | transporter||proton-dependent oligopeptide transport (POT) family protein | GO:0016020|membrane;GO:0009860|pollen tube growth;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0005215|transporter activity | rna-TAV2_LOCUS5392,rna-TAV2_LOCUS3117 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA1231:rna-TAV2_LOCUS16486,rna-TAV2_LOCUS16488;TA1371:rna-TAV2_LOCUS19533,rna-TAV2_LOCUS19539 | AT5G03220||AT5G02910 | transcriptional co-activator-related||F-box family protein | GO:0003713|transcription coactivator activity;GO:0045941|positive regulation of transcription;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS5144,rna-TAV2_LOCUS5145 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA1744:rna-TAV2_LOCUS22434,rna-TAV2_LOCUS22433;TA1745:rna-TAV2_LOCUS22467,rna-TAV2_LOCUS22468 | AT3G44350||AT5G22380 | anac061; anac061 (Arabidopsis NAC domain containing protein 61); transcription factor||anac090; anac090 (Arabidopsis NAC domain containing protein 90); transcription factor | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0010200|response to chitin;GO:0007275|multicellular organismal development;GO:0005575|cellular_component | rna-TAV2_LOCUS4823,rna-TAV2_LOCUS12232 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA206:rna-TAV2_LOCUS9871,rna-TAV2_LOCUS10680,rna-TAV2_LOCUS11833,rna-TAV2_LOCUS11523;TA1044:rna-TAV2_LOCUS9669,rna-TAV2_LOCUS11758 | ATCG00120 | ATPA; Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. | GO:0042742|defense response to bacterium;GO:0016020|membrane;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0031977|thylakoid lumen | - | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA255:rna-TAV2_LOCUS20964,rna-TAV2_LOCUS20966,rna-TAV2_LOCUS21877,rna-TAV2_LOCUS18831;TA1359:rna-TAV2_LOCUS19344,rna-TAV2_LOCUS19343 | AT5G53390||AT5G12420||AT5G53380 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA331:rna-TAV2_LOCUS3913,rna-TAV2_LOCUS3911,rna-TAV2_LOCUS3907;TA1126:rna-TAV2_LOCUS13874,rna-TAV2_LOCUS14875 | AT2G24285||AT2G24480||AT3G28620||AT5G37200 | zinc finger (C3HC4-type RING finger) family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT2G24480.1); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0016757|transferase activity, transferring glycosyl groups;GO:0003674|molecular_function;GO:0005515|protein binding;GO:0003700|transcription factor activity;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS20732 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA348:rna-TAV2_LOCUS5471,rna-TAV2_LOCUS5468,rna-TAV2_LOCUS5469;TA473:rna-TAV2_LOCUS17370,rna-TAV2_LOCUS17373,rna-TAV2_LOCUS17372 | AT1G63140||AT1G77520||AT1G77530 | O-methyltransferase, putative||O-methyltransferase family 2 protein | GO:0005829|cytosol;GO:0009809|lignin biosynthetic process;GO:0008168|methyltransferase activity;GO:0046983|protein dimerization activity;GO:0008171|O-methyltransferase activity | - | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA421:rna-TAV2_LOCUS12982,rna-TAV2_LOCUS12977,rna-TAV2_LOCUS12978;TA1221:rna-TAV2_LOCUS16159,rna-TAV2_LOCUS16156 | AT2G39420||AT2G39410||AT2G39400||AT3G55190||AT3G55180 | esterase/lipase/thioesterase family protein||hydrolase, alpha/beta fold family protein | GO:0006114|glycerol biosynthetic process;GO:0003824|catalytic activity;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0016787|hydrolase activity | rna-TAV2_LOCUS24138 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA488:rna-TAV2_LOCUS18844,rna-TAV2_LOCUS18845,rna-TAV2_LOCUS18555;TA518:rna-TAV2_LOCUS21329,rna-TAV2_LOCUS21330,rna-TAV2_LOCUS21331 | AT1G35540||AT1G34390||AT1G34170 | ARF14; ARF14 (AUXIN RESPONSE FACTOR 14); transcription factor||ARF22; ARF22 (AUXIN RESPONSE FACTOR 22); transcription factor||ARF13; transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | - | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA549:rna-TAV2_LOCUS23874,rna-TAV2_LOCUS22487,rna-TAV2_LOCUS22488;TA1589:rna-TAV2_LOCUS24786,rna-TAV2_LOCUS24785 | AT5G63820||AT4G29550 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS25404 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA566:rna-TAV2_LOCUS24962,rna-TAV2_LOCUS23061,rna-TAV2_LOCUS22793;TA953:rna-TAV2_LOCUS10889,rna-TAV2_LOCUS10893 | AT2G19760||AT4G29350||AT4G29340||AT2G19770||AT5G56600 | PFN3, PRF3; PRF3 (PROFILIN 3); actin binding||PRF4; PRF4 (PROFILIN 4); actin binding||PFN1, PRF1; PRF1 (PROFILIN 1); actin binding||PFN2, PRO2, PRF2; PFN2 (PROFILIN 2); actin binding / protein binding||PRF5; PRF5 (PROFILIN5); actin binding / actin monomer binding | GO:0008154|actin polymerization or depolymerization;GO:0005515|protein binding;GO:0005819|spindle;GO:0005730|nucleolus;GO:0009524|phragmoplast;GO:0015629|actin cytoskeleton;GO:0003779|actin binding;GO:0009826|unidimensional cell growth;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0030036|actin cytoskeleton organization;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0003785|actin monomer binding;GO:0007010|cytoskeleton organization | rna-TAV2_LOCUS21068 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA606:rna-TAV2_LOCUS22451,rna-TAV2_LOCUS22453,rna-TAV2_LOCUS22452;TA1658:rna-TAV2_LOCUS4138,rna-TAV2_LOCUS4137 | AT5G07010||AT2G03770 | ATST2A, ST2A; ST2A (SULFOTRANSFERASE 2A); hydroxyjasmonate sulfotransferase/ sulfotransferase||sulfotransferase family protein | GO:0009694|jasmonic acid metabolic process;GO:0008146|sulfotransferase activity;GO:0005575|cellular_component;GO:0009753|response to jasmonic acid stimulus | rna-TAV2_LOCUS26213 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA607:rna-TAV2_LOCUS26269,rna-TAV2_LOCUS26267,rna-TAV2_LOCUS26268;TA689:rna-TAV2_LOCUS2895,rna-TAV2_LOCUS364 | AT1G15780||AT1G15790 | unknown protein | ;GO:0005575|cellular_component | rna-TAV2_LOCUS26270 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA629:rna-TAV2_LOCUS1375,rna-TAV2_LOCUS1378;TA1424:rna-TAV2_LOCUS20451,rna-TAV2_LOCUS20454 | AT1G04820||AT5G19770 | TUA4; TUA4; structural constituent of cytoskeleton||TUA3; TUA3; structural constituent of cytoskeleton | GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0045298|tubulin complex;GO:0007017|microtubule-based process;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0009507|chloroplast;GO:0005200|structural constituent of cytoskeleton | rna-TAV2_LOCUS12291,rna-TAV2_LOCUS8484 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA850:rna-TAV2_LOCUS7010,rna-TAV2_LOCUS7011;TA996:rna-TAV2_LOCUS11768,rna-TAV2_LOCUS10789 | AT5G03480||AT5G03495 | nucleic acid binding / nucleotide binding||nucleotide binding | GO:0003676|nucleic acid binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0000166|nucleotide binding;GO:0005634|nucleus | rna-TAV2_LOCUS11549,rna-TAV2_LOCUS8835 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA946:rna-TAV2_LOCUS10622,rna-TAV2_LOCUS11776;TA1042:rna-TAV2_LOCUS9631,rna-TAV2_LOCUS9632 | AT5G02910||AT3G03360 | F-box family protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS10621,rna-TAV2_LOCUS9346 | 6 | 2 | Thlaspi arvense | Tarvense | |||
| TA1047:rna-TAV2_LOCUS9801,rna-TAV2_LOCUS9799;TA1720:rna-TAV2_LOCUS12004,rna-TAV2_LOCUS12002;TA1719:rna-TAV2_LOCUS12003,rna-TAV2_LOCUS12006 | AT3G23640 | HGL1; HGL1 (heteroglycan glucosidase 1); hydrolase, hydrolyzing O-glycosyl compounds | GO:0009507|chloroplast;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process | - | 6 | 3 | Thlaspi arvense | Tarvense | |||
| TA785:rna-TAV2_LOCUS5711,rna-TAV2_LOCUS5710;TA789:rna-TAV2_LOCUS5796,rna-TAV2_LOCUS5797;TA865:rna-TAV2_LOCUS7287,rna-TAV2_LOCUS7285 | AT1G58725 | GDSL-motif lipase, putative | GO:0004091|carboxylesterase activity;GO:0016298|lipase activity;GO:0005575|cellular_component | - | 6 | 3 | Thlaspi arvense | Tarvense | |||
| - | AT3G08900||AT5G15650||AT3G02230||AT5G50750 | RGP1, ATRGP1; RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1); cellulose synthase (UDP-forming)||RGP4; RGP4 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4); transferase, transferring hexosyl groups||RGP3, RGP; RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); transferase, transferring hexosyl groups||RGP2, ATRGP2; RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2); transferase, transferring hexosyl groups | GO:0030054|cell junction;GO:0030244|cellulose biosynthetic process;GO:0016758|transferase activity, transferring hexosyl groups;GO:0016760|cellulose synthase (UDP-forming) activity;GO:0016020|membrane;GO:0046686|response to cadmium ion;GO:0009832|plant-type cell wall biogenesis;GO:0005795|Golgi stack;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0000138|Golgi trans cisterna;GO:0009651|response to salt stress;GO:0005794|Golgi apparatus;GO:0007047|cellular cell wall organization | rna-TAV2_LOCUS10080,rna-TAV2_LOCUS19735,rna-TAV2_LOCUS15540,rna-TAV2_LOCUS8884,rna-TAV2_LOCUS21765 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G18230||AT4G01480||AT2G46850||AT3G53620||AT1G01050 | AtPPa2; AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2); inorganic diphosphatase/ pyrophosphatase||AtPPa4; AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4); inorganic diphosphatase||AtPPa5; AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5); inorganic diphosphatase/ pyrophosphatase||ATP binding / protein kinase/ protein tyrosine kinase||AtPPa1; AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1); inorganic diphosphatase | GO:0005634|nucleus;GO:0016020|membrane;GO:0046686|response to cadmium ion;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0008152|metabolic process;GO:0004713|protein tyrosine kinase activity;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0016462|pyrophosphatase activity;GO:0006796|phosphate metabolic process;GO:0004427|inorganic diphosphatase activity | rna-TAV2_LOCUS10104,rna-TAV2_LOCUS20612,rna-TAV2_LOCUS14140,rna-TAV2_LOCUS17576,rna-TAV2_LOCUS3067 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G01290||AT5G62740||AT1G69840 | band 7 family protein | GO:0005773|vacuole;GO:0016020|membrane;GO:0009507|chloroplast;GO:0005886|plasma membrane;GO:0008150|biological_process;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion | rna-TAV2_LOCUS10394,rna-TAV2_LOCUS5396,rna-TAV2_LOCUS16150,rna-TAV2_LOCUS25311,rna-TAV2_LOCUS4228 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G64760||AT2G19520||AT5G18220||AT3G04010||AT4G29730 | glycosyl hydrolase family 17 protein||NFC5, MSI5; NFC5 (Nucleosome/chromatin assembly factor group C 5)||FVE, ACG1, MSI4, NFC4, NFC04, ATMSI4; FVE; metal ion binding | GO:0005634|nucleus;GO:0003674|molecular_function;GO:0046658|anchored to plasma membrane;GO:0003824|catalytic activity;GO:0005730|nucleolus;GO:0009908|flower development;GO:0009965|leaf morphogenesis;GO:0009826|unidimensional cell growth;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0031225|anchored to membrane;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0046872|metal ion binding;GO:0008150|biological_process;GO:0010090|trichome morphogenesis;GO:0043169|cation binding | rna-TAV2_LOCUS10598,rna-TAV2_LOCUS8952,rna-TAV2_LOCUS19853,rna-TAV2_LOCUS9881,rna-TAV2_LOCUS24026 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | ATCG00900 | RPS7.1, RPS7; encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex | GO:0009507|chloroplast | rna-TAV2_LOCUS10857,rna-TAV2_LOCUS25011,rna-TAV2_LOCUS5480,rna-TAV2_LOCUS9238,rna-TAV2_LOCUS5481 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G18060||AT4G36160||AT5G62380||AT1G12260||AT1G62700 | VND5, ANAC026; ANAC026; transcription factor||VND4, EMB2749, ANAC007; ANAC007 (ARABIDOPSIS NAC 007); transcription factor||ANAC076, VND2; ANAC076 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 76); transcription factor||VND1, ANAC037; VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1); transcription factor||VND6, ANAC101; ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101); transcription activator/ transcription factor/ transcription regulator | GO:0009741|response to brassinosteroid stimulus;GO:0009737|response to abscisic acid stimulus;GO:0010089|xylem development;GO:0009735|response to cytokinin stimulus;GO:0030528|transcription regulator activity;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0009793|embryonic development ending in seed dormancy;GO:0010200|response to chitin;GO:0007275|multicellular organismal development;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0016563|transcription activator activity | rna-TAV2_LOCUS10901,rna-TAV2_LOCUS25482,rna-TAV2_LOCUS5937,rna-TAV2_LOCUS544,rna-TAV2_LOCUS6990 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G34530||AT1G10120||AT5G50915||AT4G36540 | BEE2; BEE2 (BR Enhanced Expression 2); DNA binding / transcription factor||basic helix-loop-helix (bHLH) family protein||CIB1; CIB1 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1); DNA binding / transcription factor||DNA binding / transcription factor | GO:0009739|response to gibberellin stimulus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0006351|transcription, DNA-dependent;GO:0005634|nucleus;GO:0009911|positive regulation of flower development;GO:0003677|DNA binding | rna-TAV2_LOCUS10938,rna-TAV2_LOCUS3421,rna-TAV2_LOCUS21515,rna-TAV2_LOCUS22746,rna-TAV2_LOCUS22933 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G11320||AT5G05820||AT3G10290||AT5G04160 | organic anion transmembrane transporter||phosphate translocator-related | GO:0012505|endomembrane system;GO:0008514|organic anion transmembrane transporter activity | rna-TAV2_LOCUS10967,rna-TAV2_LOCUS18530,rna-TAV2_LOCUS26204,rna-TAV2_LOCUS9639,rna-TAV2_LOCUS18966 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G04750||AT5G35700||AT5G55400||AT4G26700 | FIM2; FIM2 (FIMBRIN-LIKE PROTEIN 2); actin binding||ATFIM1, FIM1; ATFIM1; actin binding||fimbrin-like protein, putative | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0003779|actin binding;GO:0005618|cell wall;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS11272,rna-TAV2_LOCUS25329,rna-TAV2_LOCUS26297,rna-TAV2_LOCUS21154,rna-TAV2_LOCUS24826 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G54270||AT1G72730||AT3G13920 | EIF4A1, RH4, TIF4A1; EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor||eukaryotic translation initiation factor 4A, putative / eIF-4A, putative||EIF4A-2; EIF4A-2; ATP-dependent helicase/ translation initiation factor | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0004386|helicase activity;GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0003676|nucleic acid binding;GO:0016020|membrane;GO:0005730|nucleolus;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0008150|biological_process;GO:0008026|ATP-dependent helicase activity | rna-TAV2_LOCUS11315,rna-TAV2_LOCUS1799,rna-TAV2_LOCUS15349,rna-TAV2_LOCUS21766,rna-TAV2_LOCUS3572 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G10340||AT2G37040||AT3G53260 | PAL2, ATPAL2; PAL2; phenylalanine ammonia-lyase||PAL4; PAL4 (Phenylalanine ammonia-lyase 4); ammonia ligase/ ammonia-lyase/ catalytic||pal1, ATPAL1; pal1 (Phe ammonia lyase 1); phenylalanine ammonia-lyase | GO:0045548|phenylalanine ammonia-lyase activity;GO:0009699|phenylpropanoid biosynthetic process;GO:0003824|catalytic activity;GO:0016841|ammonia-lyase activity;GO:0005737|cytoplasm;GO:0006559|L-phenylalanine catabolic process;GO:0016211|ammonia ligase activity;GO:0009058|biosynthetic process;GO:0006952|defense response;GO:0009611|response to wounding;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS11511,rna-TAV2_LOCUS13411,rna-TAV2_LOCUS17864,rna-TAV2_LOCUS25534,rna-TAV2_LOCUS9644 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G75760||AT1G19970||AT4G38790 | ER lumen protein retaining receptor family protein | GO:0006621|protein retention in ER lumen;GO:0004872|receptor activity;GO:0046923|ER retention sequence binding;GO:0015031|protein transport;GO:0016021|integral to membrane | rna-TAV2_LOCUS11684,rna-TAV2_LOCUS3242,rna-TAV2_LOCUS14664,rna-TAV2_LOCUS25277,rna-TAV2_LOCUS16960 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G22890||AT5G43780||AT1G19940||AT1G75680 | AtGH9B7; AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||APS4; APS4; sulfate adenylyltransferase (ATP)||AtGH9B5; AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||APS1; APS1 (ATP SULFURYLASE 1); sulfate adenylyltransferase (ATP) | GO:0046686|response to cadmium ion;GO:0003824|catalytic activity;GO:0000103|sulfate assimilation;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0009570|chloroplast stroma;GO:0004781|sulfate adenylyltransferase (ATP) activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS11790,rna-TAV2_LOCUS24235,rna-TAV2_LOCUS7508,rna-TAV2_LOCUS3245,rna-TAV2_LOCUS18106 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G11040||AT5G05460||AT5G01600||AT2G40300||AT3G56090 | glycosyl hydrolase family 85 protein||ATFER4; ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding||ATFER1, FER1; ATFER1; ferric iron binding / iron ion binding||ATFER3; ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding||hydrolase, acting on glycosyl bonds / mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase | GO:0015979|photosynthesis;GO:0009535|chloroplast thylakoid membrane;GO:0009617|response to bacterium;GO:0009579|thylakoid;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0046914|transition metal ion binding;GO:0042542|response to hydrogen peroxide;GO:0006879|cellular iron ion homeostasis;GO:0000302|response to reactive oxygen species;GO:0005737|cytoplasm;GO:0016020|membrane;GO:0055072|iron ion homeostasis;GO:0005506|iron ion binding;GO:0048366|leaf development;GO:0008199|ferric iron binding;GO:0009941|chloroplast envelope;GO:0009570|chloroplast stroma;GO:0006826|iron ion transport;GO:0033925|mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity;GO:0005488|binding;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0016491|oxidoreductase activity;GO:0009908|flower development;GO:0009409|response to cold;GO:0010039|response to iron ion;GO:0010043|response to zinc ion | rna-TAV2_LOCUS11831,rna-TAV2_LOCUS21416,rna-TAV2_LOCUS18768,rna-TAV2_LOCUS14883,rna-TAV2_LOCUS17939 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G13580||AT2G44120||AT2G01250 | 60S ribosomal protein L7 (RPL7B)||60S ribosomal protein L7 (RPL7C)||60S ribosomal protein L7 (RPL7D) | GO:0005773|vacuole;GO:0006412|translation;GO:0016020|membrane;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0030528|transcription regulator activity;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS11926,rna-TAV2_LOCUS13709,rna-TAV2_LOCUS6180,rna-TAV2_LOCUS9747,rna-TAV2_LOCUS8582 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G54290||AT4G27130||AT5G54940 | eukaryotic translation initiation factor SUI1, putative | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0006412|translation;GO:0005575|cellular_component | rna-TAV2_LOCUS11931,rna-TAV2_LOCUS25159,rna-TAV2_LOCUS1792,rna-TAV2_LOCUS7956,rna-TAV2_LOCUS22029 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G34360||AT5G52450||AT1G73700 | MATE efflux family protein||antiporter/ drug transporter/ transporter||MATE efflux protein-related | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0009624|response to nematode;GO:0015297|antiporter activity | rna-TAV2_LOCUS12563,rna-TAV2_LOCUS21946,rna-TAV2_LOCUS12564,rna-TAV2_LOCUS25093,rna-TAV2_LOCUS25096 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | - | - | - | rna-TAV2_LOCUS1259,rna-TAV2_LOCUS21326,rna-TAV2_LOCUS18082,rna-TAV2_LOCUS18846,rna-TAV2_LOCUS21354 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G38630||AT3G54190 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38630.1); Has 77 Blast hits to 77 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: WD40 repeat-like (InterPro:IPR011046); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54190.1); Has 79 Blast hits to 77 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS12684,rna-TAV2_LOCUS17116,rna-TAV2_LOCUS8658,rna-TAV2_LOCUS8301,rna-TAV2_LOCUS8659 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G35060||AT1G31120||AT4G19960 | potassium ion transmembrane transporter||KUP11; KUP11; potassium ion transmembrane transporter||KUP10; KUP10; potassium ion transmembrane transporter | GO:0016020|membrane;GO:0006813|potassium ion transport;GO:0009555|pollen development;GO:0005886|plasma membrane;GO:0015079|potassium ion transmembrane transporter activity | rna-TAV2_LOCUS12879,rna-TAV2_LOCUS3802,rna-TAV2_LOCUS8245,rna-TAV2_LOCUS25631,rna-TAV2_LOCUS8246 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G31390||AT1G06030||AT3G59480||AT4G10260 | pfkB-type carbohydrate kinase family protein | GO:0004747|ribokinase activity;GO:0016301|kinase activity;GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0019654|acetate fermentation;GO:0005886|plasma membrane;GO:0006014|D-ribose metabolic process;GO:0005986|sucrose biosynthetic process | rna-TAV2_LOCUS13972,rna-TAV2_LOCUS3939,rna-TAV2_LOCUS16365,rna-TAV2_LOCUS252,rna-TAV2_LOCUS21843 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G30060||AT1G07140||AT5G58590 | RANBP1; RANBP1 (RAN BINDING PROTEIN 1); protein binding||SIRANBP; SIRANBP; Ran GTPase binding||Ran-binding protein 1b (RanBP1b) | GO:0008536|Ran GTPase binding;GO:0000060|protein import into nucleus, translocation;GO:0005515|protein binding;GO:0005575|cellular_component;GO:0046907|intracellular transport | rna-TAV2_LOCUS13991,rna-TAV2_LOCUS901,rna-TAV2_LOCUS14106,rna-TAV2_LOCUS5669,rna-TAV2_LOCUS19560 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT2G42500||AT3G58500||AT1G69960||AT1G59830||AT1G10430 | PP2A-3, EP7; PP2A-3 (PROTEIN PHOSPHATASE 2A-3); protein serine/threonine phosphatase||PP2A-4; PP2A-4; hydrolase/ protein serine/threonine phosphatase||PP2A; PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A); protein serine/threonine phosphatase||PP2A-2; PP2A-2; protein serine/threonine phosphatase||PP2A-1; PP2A-1; protein serine/threonine phosphatase | GO:0006470|protein amino acid dephosphorylation;GO:0005730|nucleolus;GO:0004722|protein serine/threonine phosphatase activity;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus;GO:0016787|hydrolase activity;GO:0000159|protein phosphatase type 2A complex;GO:0009926|auxin polar transport | rna-TAV2_LOCUS14291,rna-TAV2_LOCUS16164,rna-TAV2_LOCUS17454,rna-TAV2_LOCUS5154,rna-TAV2_LOCUS3873 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G07660 | histone H4 | GO:0009507|chloroplast;GO:0006334|nucleosome assembly;GO:0005886|plasma membrane;GO:0003677|DNA binding | rna-TAV2_LOCUS14653,rna-TAV2_LOCUS20701,rna-TAV2_LOCUS22033,rna-TAV2_LOCUS4,rna-TAV2_LOCUS996 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G60720||AT3G24255 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23910.1); Has 2302 Blast hits to 2235 proteins in 74 species: Archae - 4; Bacteria - 15; Metazoa - 871; Fungi - 12; Plants - 1295; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33710.1); Has 408 Blast hits to 400 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 408; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS15036,rna-TAV2_LOCUS3951,rna-TAV2_LOCUS9803,rna-TAV2_LOCUS20829,rna-TAV2_LOCUS23847 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G09590 | 60S ribosomal protein L21 (RPL21A) | GO:0006412|translation;GO:0005840|ribosome;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS15065,rna-TAV2_LOCUS4028,rna-TAV2_LOCUS4024,rna-TAV2_LOCUS7444,rna-TAV2_LOCUS6175 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G51280 | DEAD-box protein abstrakt, putative | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0008026|ATP-dependent helicase activity | rna-TAV2_LOCUS15231,rna-TAV2_LOCUS8839,rna-TAV2_LOCUS1904,rna-TAV2_LOCUS9695,rna-TAV2_LOCUS4407 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G80050||AT5G11160||AT4G22570||AT4G12440||AT1G27450 | APT1, ATAPT1; APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1); adenine phosphoribosyltransferase||APT3; APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3); adenine phosphoribosyltransferase||APT5; APT5 (Adenine phosphoribosyltransferase 5); adenine phosphoribosyltransferase||APT4; adenine phosphoribosyltransferase, putative||APT2, ATAPT2; APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2); adenine phosphoribosyltransferase/ phosphate transmembrane transporter | GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0009117|nucleotide metabolic process;GO:0003999|adenine phosphoribosyltransferase activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0009061|anaerobic respiration;GO:0005575|cellular_component;GO:0009116|nucleoside metabolic process;GO:0015114|phosphate transmembrane transporter activity;GO:0009507|chloroplast;GO:0006168|adenine salvage | rna-TAV2_LOCUS15757,rna-TAV2_LOCUS21480,rna-TAV2_LOCUS22917,rna-TAV2_LOCUS20904,rna-TAV2_LOCUS678 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G48640||AT5G40780||AT1G67640||AT1G24400 | lysine and histidine specific transporter, putative||LHT2, AATL2; LHT2 (LYSINE HISTIDINE TRANSPORTER 2); acidic amino acid transmembrane transporter/ amino acid transmembrane transporter/ neutral amino acid transmembrane transporter||LTH1; LHT1; amino acid transmembrane transporter | GO:0016020|membrane;GO:0015172|acidic amino acid transmembrane transporter activity;GO:0015175|neutral amino acid transmembrane transporter activity;GO:0043090|amino acid import;GO:0006865|amino acid transport;GO:0005886|plasma membrane;GO:0005275|amine transmembrane transporter activity;GO:0015171|amino acid transmembrane transporter activity | rna-TAV2_LOCUS1623,rna-TAV2_LOCUS23036,rna-TAV2_LOCUS17258,rna-TAV2_LOCUS2535,rna-TAV2_LOCUS7339 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G72000||AT1G22650||AT1G35580||AT4G09510||AT4G34860 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative||CINV2; beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative||CINV1; CINV1 (cytosolic invertase 1); beta-fructofuranosidase | GO:0005829|cytosol;GO:0003824|catalytic activity;GO:0016020|membrane;GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0005515|protein binding;GO:0006520|cellular amino acid metabolic process;GO:0004564|beta-fructofuranosidase activity;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS16750,rna-TAV2_LOCUS3660,rna-TAV2_LOCUS1709,rna-TAV2_LOCUS19877,rna-TAV2_LOCUS23028 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT3G49470||AT4G10480||AT1G33040||AT3G12390 | NACA5; NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)||NACA2; NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)||nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | GO:0003674|molecular_function;GO:0022626|cytosolic ribosome;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009651|response to salt stress | rna-TAV2_LOCUS17110,rna-TAV2_LOCUS20686,rna-TAV2_LOCUS3966,rna-TAV2_LOCUS20994,rna-TAV2_LOCUS8811 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G55810||AT4G26510||AT5G40870||AT3G27190 | ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase||uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative||AtUK/UPRT1; AtUK/UPRT1 (Uridine kinase/Uracil phosphoribosyltransferase 1); ATP binding / kinase/ uracil phosphoribosyltransferase/ uridine kinase | GO:0016301|kinase activity;GO:0004849|uridine kinase activity;GO:0004845|uracil phosphoribosyltransferase activity;GO:0005524|ATP binding;GO:0005737|cytoplasm;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0009058|biosynthetic process;GO:0016773|phosphotransferase activity, alcohol group as acceptor | rna-TAV2_LOCUS1727,rna-TAV2_LOCUS19420,rna-TAV2_LOCUS25641,rna-TAV2_LOCUS24375,rna-TAV2_LOCUS6198 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G01360||AT4G01026||AT5G53160||AT4G27920 | unknown protein | GO:0009737|response to abscisic acid stimulus;GO:0003674|molecular_function;GO:0009738|abscisic acid mediated signaling pathway;GO:0010427|abscisic acid binding;GO:0009789|positive regulation of abscisic acid mediated signaling pathway;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus;GO:0006950|response to stress | rna-TAV2_LOCUS17419,rna-TAV2_LOCUS2326,rna-TAV2_LOCUS18990,rna-TAV2_LOCUS21692,rna-TAV2_LOCUS24597 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G03870||AT1G03860||AT4G28510||AT2G20530 | ATPHB6; ATPHB6 (PROHIBITIN 6)||FLA9; FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)||ATPHB2; ATPHB2 (PROHIBITIN 2)||ATPHB1; ATPHB1 (PROHIBITIN 1) | GO:0005773|vacuole;GO:0009536|plastid;GO:0046658|anchored to plasma membrane;GO:0016020|membrane;GO:0005747|mitochondrial respiratory chain complex I;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0031225|anchored to membrane;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0006950|response to stress;GO:0005739|mitochondrion;GO:0045271|respiratory chain complex I | rna-TAV2_LOCUS1820,rna-TAV2_LOCUS6597,rna-TAV2_LOCUS1821,rna-TAV2_LOCUS23542,rna-TAV2_LOCUS9453 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G30300||AT4G03610 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS1879,rna-TAV2_LOCUS21914,rna-TAV2_LOCUS8237,rna-TAV2_LOCUS8234,rna-TAV2_LOCUS8235 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT1G10540||AT1G60030||AT5G49990||AT5G62890 | ATNAT7, NAT7; xanthine/uracil permease family protein||ATNAT8, NAT8; xanthine/uracil permease family protein||xanthine/uracil permease family protein||permease, putative | GO:0005773|vacuole;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0022857|transmembrane transporter activity;GO:0006810|transport | rna-TAV2_LOCUS1902,rna-TAV2_LOCUS6741,rna-TAV2_LOCUS19607,rna-TAV2_LOCUS7357,rna-TAV2_LOCUS8313 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G08570||AT5G63680||AT5G56350||AT4G26390||AT3G04050 | pyruvate kinase, putative | GO:0000287|magnesium ion binding;GO:0003824|catalytic activity;GO:0046686|response to cadmium ion;GO:0004743|pyruvate kinase activity;GO:0006096|glycolysis;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0030955|potassium ion binding | rna-TAV2_LOCUS19492,rna-TAV2_LOCUS5645,rna-TAV2_LOCUS21368,rna-TAV2_LOCUS24713,rna-TAV2_LOCUS9599 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT5G22510||AT1G56560||AT3G05820||AT3G06500 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative||beta-fructofuranosidase/ catalytic | GO:0005982|starch metabolic process;GO:0003824|catalytic activity;GO:0004564|beta-fructofuranosidase activity;GO:0048825|cotyledon development;GO:0008150|biological_process;GO:0009507|chloroplast | rna-TAV2_LOCUS19690,rna-TAV2_LOCUS4104,rna-TAV2_LOCUS5931,rna-TAV2_LOCUS9999,rna-TAV2_LOCUS9493 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| - | AT4G05100||AT4G21440||AT4G28110||AT5G54230 | AtMYB74; AtMYB74 (myb domain protein 74); DNA binding / transcription factor||ATMYB102, ATM4; ATMYB102 (ARABIDOPSIS MYB-LIKE 102); DNA binding / transcription factor||MYB49, AtMYB49; MYB49 (myb domain protein 49); transcription factor||AtMYB41; AtMYB41 (myb domain protein 41); DNA binding / transcription factor | GO:0009737|response to abscisic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0006970|response to osmotic stress;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0016481|negative regulation of transcription;GO:0016049|cell growth;GO:0010200|response to chitin;GO:0009753|response to jasmonic acid stimulus;GO:0009651|response to salt stress;GO:0042335|cuticle development;GO:0009611|response to wounding;GO:0003677|DNA binding | rna-TAV2_LOCUS20728,rna-TAV2_LOCUS4570,rna-TAV2_LOCUS23275,rna-TAV2_LOCUS24936,rna-TAV2_LOCUS22200 | 5 | 0 | Thlaspi arvense | Tarvense | |||
| TA107:rna-TAV2_LOCUS1863,rna-TAV2_LOCUS1864,rna-TAV2_LOCUS1855,rna-TAV2_LOCUS1856,rna-TAV2_LOCUS1857 | AT1G13550||AT1G13480||AT1G13470||AT1G13520 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA109:rna-TAV2_LOCUS2721,rna-TAV2_LOCUS2718,rna-TAV2_LOCUS2717,rna-TAV2_LOCUS171,rna-TAV2_LOCUS172 | AT1G33870||AT1G33900||AT1G33890 | avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative | GO:0005525|GTP binding;GO:0009617|response to bacterium;GO:0005575|cellular_component | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1119:rna-TAV2_LOCUS13768,rna-TAV2_LOCUS12841 | AT2G47880||AT2G47870||AT2G30540||AT1G06830||AT3G62960 | glutaredoxin family protein | GO:0015035|protein disulfide oxidoreductase activity;GO:0045454|cell redox homeostasis;GO:0009055|electron carrier activity;GO:0012505|endomembrane system | rna-TAV2_LOCUS13544,rna-TAV2_LOCUS1494,rna-TAV2_LOCUS16709 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA111:rna-TAV2_LOCUS3193,rna-TAV2_LOCUS3192,rna-TAV2_LOCUS3188,rna-TAV2_LOCUS1673,rna-TAV2_LOCUS1669 | AT1G30700||AT1G30720||AT1G30730||AT1G30740||AT1G30760 | FAD-binding domain-containing protein | GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0050660|FAD binding;GO:0009055|electron carrier activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA112:rna-TAV2_LOCUS3598,rna-TAV2_LOCUS3599,rna-TAV2_LOCUS1764,rna-TAV2_LOCUS1763,rna-TAV2_LOCUS1765 | AT1G19390 | wall-associated kinase, putative | GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA115:rna-TAV2_LOCUS5397,rna-TAV2_LOCUS5403,rna-TAV2_LOCUS5404,rna-TAV2_LOCUS5402,rna-TAV2_LOCUS5401 | AT3G28130||AT3G28100||AT5G40210||AT3G28050 | nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process;GO:0016020|membrane | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA116:rna-TAV2_LOCUS5417,rna-TAV2_LOCUS5422,rna-TAV2_LOCUS5423,rna-TAV2_LOCUS5420,rna-TAV2_LOCUS5421 | AT1G60710||AT1G60690||AT1G60750 | aldo/keto reductase family protein||oxidoreductase||ATB2; ATB2; oxidoreductase | GO:0016491|oxidoreductase activity;GO:0046686|response to cadmium ion;GO:0004033|aldo-keto reductase activity;GO:0055114|oxidation reduction;GO:0009941|chloroplast envelope;GO:0005886|plasma membrane | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA118:rna-TAV2_LOCUS6143,rna-TAV2_LOCUS6142,rna-TAV2_LOCUS6141,rna-TAV2_LOCUS6140,rna-TAV2_LOCUS6139 | AT1G66100||AT5G36910 | THI2.2; THI2.2 (THIONIN 2.2); toxin receptor binding||thionin, putative | GO:0050827|toxin receptor binding;GO:0012505|endomembrane system;GO:0006952|defense response | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA119:rna-TAV2_LOCUS6967,rna-TAV2_LOCUS6968,rna-TAV2_LOCUS6969,rna-TAV2_LOCUS6970,rna-TAV2_LOCUS6965 | AT5G45650||AT5G45640 | subtilase family protein | GO:0043086|negative regulation of catalytic activity;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0042802|identical protein binding | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA121:rna-TAV2_LOCUS7483,rna-TAV2_LOCUS7484,rna-TAV2_LOCUS7485,rna-TAV2_LOCUS7486,rna-TAV2_LOCUS6089 | AT5G44840||AT4G35670 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1223:rna-TAV2_LOCUS16216,rna-TAV2_LOCUS16215 | AT3G49120||AT3G32980||AT4G08770 | peroxidase 32 (PER32) (P32) (PRXR3)||ATPERX34, PERX34, PRXCB, ATPCB; PRXCB (PEROXIDASE CB); peroxidase||peroxidase, putative | GO:0005773|vacuole;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0048046|apoplast;GO:0006979|response to oxidative stress;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0009055|electron carrier activity | rna-TAV2_LOCUS11186,rna-TAV2_LOCUS17299,rna-TAV2_LOCUS19605 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA122:rna-TAV2_LOCUS8017,rna-TAV2_LOCUS8010,rna-TAV2_LOCUS8012,rna-TAV2_LOCUS8014,rna-TAV2_LOCUS7647 | AT1G59890||AT1G70030 | paired amphipathic helix repeat-containing protein||SNL5; SNL5 (SIN3-LIKE 5) | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0003674|molecular_function | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA124:rna-TAV2_LOCUS11288,rna-TAV2_LOCUS11287,rna-TAV2_LOCUS11286,rna-TAV2_LOCUS11285,rna-TAV2_LOCUS11284 | AT3G20370||AT3G20360 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA125:rna-TAV2_LOCUS11490,rna-TAV2_LOCUS11387,rna-TAV2_LOCUS8988,rna-TAV2_LOCUS8990,rna-TAV2_LOCUS8989 | AT3G21000||AT3G20980 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA126:rna-TAV2_LOCUS11724,rna-TAV2_LOCUS11732,rna-TAV2_LOCUS10564,rna-TAV2_LOCUS10558,rna-TAV2_LOCUS10560 | AT3G24260 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28870.1); Has 139 Blast hits to 137 proteins in 48 species: Archae - 5; Bacteria - 3; Metazoa - 37; Fungi - 2; Plants - 50; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink). | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA130:rna-TAV2_LOCUS9400,rna-TAV2_LOCUS9401,rna-TAV2_LOCUS10514,rna-TAV2_LOCUS10513,rna-TAV2_LOCUS10511 | AT2G15710||AT3G22080 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA131:rna-TAV2_LOCUS9919,rna-TAV2_LOCUS9918,rna-TAV2_LOCUS10960,rna-TAV2_LOCUS10959,rna-TAV2_LOCUS10956 | AT3G16470||AT1G52040||AT3G16460||AT3G16430||AT3G16390 | JAL31; JAL31 (JACALIN-RELATED LECTIN 31); copper ion binding||NSP3; NSP3 (NITRILE SPECIFIER PROTEIN 3)||MBP1, ATMBP; MBP1 (MYROSINASE-BINDING PROTEIN 1); protein binding||JR1; JR1||jacalin lectin family protein | GO:0005773|vacuole;GO:0005507|copper ion binding;GO:0016020|membrane;GO:0005515|protein binding;GO:0009651|response to salt stress;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0006952|defense response | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA132:rna-TAV2_LOCUS9934,rna-TAV2_LOCUS9933,rna-TAV2_LOCUS9936,rna-TAV2_LOCUS9935,rna-TAV2_LOCUS9937 | AT2G04040||AT2G04070||AT2G04100 | ATDTX1, TX1; TX1; antiporter/ multidrug efflux pump/ multidrug transporter/ transporter||MATE efflux family protein||antiporter/ drug transporter/ transporter | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0015691|cadmium ion transport;GO:0006855|drug transmembrane transport;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0006810|transport;GO:0015297|antiporter activity;GO:0051238|sequestering of metal ion | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1335:rna-TAV2_LOCUS18843,rna-TAV2_LOCUS18835 | AT5G54620 | ankyrin repeat family protein | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | rna-TAV2_LOCUS24942,rna-TAV2_LOCUS19238,rna-TAV2_LOCUS19614 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1343:rna-TAV2_LOCUS19036,rna-TAV2_LOCUS21313 | AT5G54800||AT1G61800 | GPT2; GPT2; antiporter/ glucose-6-phosphate transmembrane transporter||GPT1; GPT1; antiporter/ glucose-6-phosphate transmembrane transporter | GO:0009553|embryo sac development;GO:0016020|membrane;GO:0015152|glucose-6-phosphate transmembrane transporter activity;GO:0007033|vacuole organization;GO:0010152|pollen maturation;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0009624|response to nematode;GO:0015297|antiporter activity;GO:0009507|chloroplast;GO:0034389|lipid particle organization | rna-TAV2_LOCUS7328,rna-TAV2_LOCUS210,rna-TAV2_LOCUS17676 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1347:rna-TAV2_LOCUS19131,rna-TAV2_LOCUS19132 | AT5G02500||AT3G09440||AT5G02490||AT1G16030 | HSC70-1, HSP70-1, AT-HSC70-1, HSC70; HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding||heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)||Hsp70b; Hsp70b (heat shock protein 70B); ATP binding||heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3) | GO:0005773|vacuole;GO:0005829|cytosol;GO:0016020|membrane;GO:0046686|response to cadmium ion;GO:0005730|nucleolus;GO:0009615|response to virus;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0048046|apoplast;GO:0022626|cytosolic ribosome;GO:0009409|response to cold;GO:0009408|response to heat;GO:0006457|protein folding;GO:0009617|response to bacterium;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS7656,rna-TAV2_LOCUS5462,rna-TAV2_LOCUS3958 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA134:rna-TAV2_LOCUS13556,rna-TAV2_LOCUS13555,rna-TAV2_LOCUS13554,rna-TAV2_LOCUS13553,rna-TAV2_LOCUS13560 | AT2G36800||AT2G36770||AT2G36790||AT2G36760 | UDP-glucoronosyl/UDP-glucosyl transferase family protein||UGT73C6; UGT73C6 (UDP-glucosyl transferase 73C6); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||DOGT1, UGT73C5; DOGT1 (DON-GLUCOSYLTRANSFERASE 1); UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucosyltransferase/ quercetin 4'-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transf||UGT73C2; UGT73C2 (UDP-glucosyl transferase 73C2); UDP-glycosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | GO:0051555|flavonol biosynthetic process;GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0050502|cis-zeatin O-beta-D-glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0046527|glucosyltransferase activity;GO:0005575|cellular_component;GO:0050403|trans-zeatin O-beta-D-glucosyltransferase activity;GO:0016131|brassinosteroid metabolic process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1353:rna-TAV2_LOCUS19258,rna-TAV2_LOCUS19264 | AT3G02630||AT5G16230||AT2G43710||AT1G43800 | acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative||SSI2, FAB2; SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | GO:0046914|transition metal ion binding;GO:0006631|fatty acid metabolic process;GO:0004768|stearoyl-CoA 9-desaturase activity;GO:0045300|acyl-[acyl-carrier-protein] desaturase activity;GO:0016491|oxidoreductase activity;GO:0009863|salicylic acid mediated signaling pathway;GO:0042742|defense response to bacterium;GO:0051607|defense response to virus;GO:0016020|membrane;GO:0009695|jasmonic acid biosynthetic process;GO:0008610|lipid biosynthetic process;GO:0006633|fatty acid biosynthetic process;GO:0009570|chloroplast stroma;GO:0006636|unsaturated fatty acid biosynthetic process;GO:0009507|chloroplast;GO:0006952|defense response;GO:0009867|jasmonic acid mediated signaling pathway | rna-TAV2_LOCUS13749,rna-TAV2_LOCUS9257,rna-TAV2_LOCUS3387 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA136:rna-TAV2_LOCUS14418,rna-TAV2_LOCUS14417,rna-TAV2_LOCUS14420,rna-TAV2_LOCUS14419,rna-TAV2_LOCUS14415 | AT2G44380||AT5G43520||AT2G17740||AT2G44370 | DC1 domain-containing protein | ;GO:0005575|cellular_component | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1377:rna-TAV2_LOCUS19679,rna-TAV2_LOCUS19682 | AT3G02920 | replication protein-related | GO:0008150|biological_process;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS10118,rna-TAV2_LOCUS25509,rna-TAV2_LOCUS8833 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA137:rna-TAV2_LOCUS14549,rna-TAV2_LOCUS14550,rna-TAV2_LOCUS14547,rna-TAV2_LOCUS14548,rna-TAV2_LOCUS14545 | AT2G43550||AT2G43520||AT2G43510 | trypsin inhibitor, putative||ATTI1; ATTI1; serine-type endopeptidase inhibitor||ATTI2; ATTI2; serine-type endopeptidase inhibitor | GO:0005576|extracellular region;GO:0004867|serine-type endopeptidase inhibitor activity;GO:0012505|endomembrane system;GO:0050832|defense response to fungus;GO:0006952|defense response | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA138:rna-TAV2_LOCUS15780,rna-TAV2_LOCUS15783,rna-TAV2_LOCUS15782,rna-TAV2_LOCUS15778,rna-TAV2_LOCUS15777 | AT3G46720||AT3G46660||AT3G46690 | UDP-glucoronosyl/UDP-glucosyl transferase family protein||UGT76E12; UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1403:rna-TAV2_LOCUS19995,rna-TAV2_LOCUS21341 | AT5G44050||AT5G65380 | MATE efflux family protein||ripening-responsive protein, putative | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0009835|ripening;GO:0005215|transporter activity;GO:0015297|antiporter activity | rna-TAV2_LOCUS16234,rna-TAV2_LOCUS13072,rna-TAV2_LOCUS6959 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA141:rna-TAV2_LOCUS16883,rna-TAV2_LOCUS16884,rna-TAV2_LOCUS16885,rna-TAV2_LOCUS16886,rna-TAV2_LOCUS18022 | AT1G58270 | ZW9; ZW9 | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA142:rna-TAV2_LOCUS17400,rna-TAV2_LOCUS17399,rna-TAV2_LOCUS17402,rna-TAV2_LOCUS17401,rna-TAV2_LOCUS17404 | AT1G68210 | APRR6, PRR6; APRR6 (PSEUDO-RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator | GO:0000156|two-component response regulator activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0030528|transcription regulator activity;GO:0045449|regulation of transcription;GO:0000160|two-component signal transduction system (phosphorelay);GO:0005575|cellular_component | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA145:rna-TAV2_LOCUS20149,rna-TAV2_LOCUS20151,rna-TAV2_LOCUS20156,rna-TAV2_LOCUS20155,rna-TAV2_LOCUS20147 | AT4G11000 | ankyrin repeat family protein | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA147:rna-TAV2_LOCUS20663,rna-TAV2_LOCUS20656,rna-TAV2_LOCUS20657,rna-TAV2_LOCUS20658,rna-TAV2_LOCUS20659 | AT4G02760||AT4G02740 | CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02760.2); Has 1691 Blast hits to 1200 proteins in 170 species: Archae - 2; Bacteria - 109; Metazoa - 687; Fungi - 197; Plants - 199; Viruses - 23; Other Eukaryotes - 474 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02740.1); Has 3231 Blast hits to 948 proteins in 145 species: Archae - 0; Bacteria - 50; Metazoa - 1253; Fungi - 344; Plants - 69; Viruses - 27; Other Eukaryotes - 1488 (source: NCBI BLink). | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA148:rna-TAV2_LOCUS20702,rna-TAV2_LOCUS20699,rna-TAV2_LOCUS20700,rna-TAV2_LOCUS20707,rna-TAV2_LOCUS20708 | AT5G59670||AT5G59650||AT5G59680 | leucine-rich repeat protein kinase, putative | GO:0016301|kinase activity;GO:0005515|protein binding;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA151:rna-TAV2_LOCUS22646,rna-TAV2_LOCUS25538,rna-TAV2_LOCUS25543,rna-TAV2_LOCUS22645,rna-TAV2_LOCUS24210 | AT1G26680||AT4G31680||AT4G31660||AT4G31620||AT4G31610 | transcriptional factor B3 family protein||REM1, ATREM1; REM1 (REPRODUCTIVE MERISTEM 1); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0003677|DNA binding | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA152:rna-TAV2_LOCUS23234,rna-TAV2_LOCUS23350,rna-TAV2_LOCUS23232,rna-TAV2_LOCUS23233,rna-TAV2_LOCUS23240 | AT4G18210||AT4G18205||AT4G18195||AT4G18190||AT4G18180 | ATPUP6; ATPUP6; purine transmembrane transporter||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: PUP7 (PURINE PERMEASE 7); purine transmembrane transporter (TAIR:AT4G18197.1); Has 282 Blast hits to 276 proteins in 29 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 22; Plants - 229; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).||ATPUP8, PUP8; PUP8 (ARABIDOPSIS THALIANA PURINE PERMEASE 8); purine transmembrane transporter||ATPUP10; ATPUP10; purine transmembrane transporter||glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0005345|purine transmembrane transporter activity;GO:0003674|molecular_function;GO:0016020|membrane;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0009624|response to nematode;GO:0008150|biological_process;GO:0006863|purine transport | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA154:rna-TAV2_LOCUS24398,rna-TAV2_LOCUS24401,rna-TAV2_LOCUS24400,rna-TAV2_LOCUS24393,rna-TAV2_LOCUS24392 | AT4G15233||AT4G15230 | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||ATPDR2, PDR2; PDR2 (PLEIOTROPIC DRUG RESISTANCE 2); ATPase, coupled to transmembrane movement of substances | GO:0016020|membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006855|drug transmembrane transport;GO:0006810|transport;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1563:rna-TAV2_LOCUS24184,rna-TAV2_LOCUS24185 | AT4G18360||AT3G14420 | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | GO:0008891|glycolate oxidase activity;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0005777|peroxisome;GO:0016020|membrane;GO:0048046|apoplast;GO:0008152|metabolic process;GO:0022626|cytosolic ribosome;GO:0009570|chloroplast stroma;GO:0010181|FMN binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0009055|electron carrier activity | rna-TAV2_LOCUS15043,rna-TAV2_LOCUS16513,rna-TAV2_LOCUS9245 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1569:rna-TAV2_LOCUS24305,rna-TAV2_LOCUS23371 | AT2G47610||AT3G62870 | 60S ribosomal protein L7A (RPL7aB)||60S ribosomal protein L7A (RPL7aA) | GO:0006412|translation;GO:0016020|membrane;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS11986,rna-TAV2_LOCUS13132,rna-TAV2_LOCUS16132 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA156:rna-TAV2_LOCUS24974,rna-TAV2_LOCUS24973,rna-TAV2_LOCUS24972,rna-TAV2_LOCUS24971,rna-TAV2_LOCUS24970 | AT5G40210||AT5G40230||AT5G40240 | nodulin-related||nodulin MtN21 family protein | GO:0003674|molecular_function;GO:0016020|membrane | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA159:rna-TAV2_LOCUS4691,rna-TAV2_LOCUS4692,rna-TAV2_LOCUS4689,rna-TAV2_LOCUS4690,rna-TAV2_LOCUS4688 | AT1G07530||AT1G07520||AT2G37650 | scarecrow transcription factor family protein||SCL14, ATGRAS2, GRAS2; SCL14 (SCARECROW-LIKE 14); transcription factor||scarecrow-like transcription factor 9 (SCL9) | GO:0005829|cytosol;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0043193|positive regulation of gene-specific transcription;GO:0010200|response to chitin;GO:0009410|response to xenobiotic stimulus;GO:0005575|cellular_component;GO:0005634|nucleus | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1600:rna-TAV2_LOCUS25110,rna-TAV2_LOCUS25107 | AT2G29880||AT1G30140||AT5G27260 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS18499,rna-TAV2_LOCUS11099,rna-TAV2_LOCUS7675 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA160:rna-TAV2_LOCUS4729,rna-TAV2_LOCUS4728,rna-TAV2_LOCUS4733,rna-TAV2_LOCUS4732,rna-TAV2_LOCUS4725 | AT2G45560||AT2G45580||AT2G45550||AT1G33730||AT3G61040 | CYP76C4; CYP76C4; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C7; CYP76C7; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C1; CYP76C1; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP76C5; CYP76C5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C3; CYP76C3; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA161:rna-TAV2_LOCUS4794,rna-TAV2_LOCUS4788,rna-TAV2_LOCUS4790,rna-TAV2_LOCUS4789,rna-TAV2_LOCUS4792 | AT5G65380 | ripening-responsive protein, putative | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0009835|ripening;GO:0005215|transporter activity;GO:0015297|antiporter activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA162:rna-TAV2_LOCUS8502,rna-TAV2_LOCUS8503,rna-TAV2_LOCUS8500,rna-TAV2_LOCUS8501,rna-TAV2_LOCUS8504 | AT3G16970||AT5G04350 | self-incompatibility protein-related | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA163:rna-TAV2_LOCUS15146,rna-TAV2_LOCUS15147,rna-TAV2_LOCUS15145,rna-TAV2_LOCUS15141,rna-TAV2_LOCUS15142 | AT5G17540 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0008150|biological_process | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA1649:rna-TAV2_LOCUS26079,rna-TAV2_LOCUS22996 | AT4G34520||AT4G34510||AT2G16280||AT1G19440 | KCS9; KCS9 (3-KETOACYL-COA SYNTHASE 9); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups||KCS4; KCS4 (3-KETOACYL-COA SYNTHASE 4); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups||FAE1, KCS18; KCS18; acyltransferase/ fatty acid elongase||KCS17; KCS17 (3-KETOACYL-COA SYNTHASE 17); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0009922|fatty acid elongase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0030497|fatty acid elongation;GO:0000038|very-long-chain fatty acid metabolic process;GO:0012505|endomembrane system;GO:0009409|response to cold;GO:0042335|cuticle development;GO:0008415|acyltransferase activity;GO:0009416|response to light stimulus | rna-TAV2_LOCUS9822,rna-TAV2_LOCUS8895,rna-TAV2_LOCUS3596 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA167:rna-TAV2_LOCUS26291,rna-TAV2_LOCUS26292,rna-TAV2_LOCUS26293,rna-TAV2_LOCUS26294,rna-TAV2_LOCUS26289 | AT5G16980||AT5G16990||AT1G65560 | NADP-dependent oxidoreductase, putative||allyl alcohol dehydrogenase, putative | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0006979|response to oxidative stress | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA168:rna-TAV2_LOCUS4409,rna-TAV2_LOCUS4408,rna-TAV2_LOCUS4412,rna-TAV2_LOCUS4413,rna-TAV2_LOCUS4410 | AT3G51550||AT5G39000 | FER; FER (FERONIA); kinase/ protein kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0046777|protein amino acid autophosphorylation;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0009791|post-embryonic development;GO:0043680|filiform apparatus;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0010483|pollen tube reception;GO:0004672|protein kinase activity | - | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA171:rna-TAV2_LOCUS164,rna-TAV2_LOCUS1554,rna-TAV2_LOCUS1555,rna-TAV2_LOCUS1557 | - | - | - | rna-TAV2_LOCUS18161 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA177:rna-TAV2_LOCUS3303,rna-TAV2_LOCUS3302,rna-TAV2_LOCUS2839,rna-TAV2_LOCUS2840 | AT1G21120||AT1G21100||AT1G76790 | O-methyltransferase, putative||O-methyltransferase family 2 protein | GO:0008171|O-methyltransferase activity;GO:0005829|cytosol;GO:0008168|methyltransferase activity;GO:0046983|protein dimerization activity | rna-TAV2_LOCUS17007 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA197:rna-TAV2_LOCUS10223,rna-TAV2_LOCUS10975,rna-TAV2_LOCUS9240,rna-TAV2_LOCUS8769 | ATCG00680 | PSBB; encodes for CP47, subunit of the photosystem II reaction center. | GO:0009507|chloroplast;GO:0009579|thylakoid;GO:0016020|membrane | rna-TAV2_LOCUS24258 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA198:rna-TAV2_LOCUS10678,rna-TAV2_LOCUS11519,rna-TAV2_LOCUS10372,rna-TAV2_LOCUS10373 | ATCG00040 | MATK; Encodes a maturase located in the trnK intron in the chloroplast genome. | GO:0009507|chloroplast;GO:0008380|RNA splicing;GO:0003964|RNA-directed DNA polymerase activity;GO:0003723|RNA binding | rna-TAV2_LOCUS15039 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA201:rna-TAV2_LOCUS11447,rna-TAV2_LOCUS11448,rna-TAV2_LOCUS11449,rna-TAV2_LOCUS10297 | AT2G17310 | SON1; SON1 (SUPPRESSOR OF NIM1-1 1) | GO:0016567|protein ubiquitination;GO:0003674|molecular_function;GO:0009617|response to bacterium;GO:0019005|SCF ubiquitin ligase complex;GO:0009620|response to fungus | rna-TAV2_LOCUS10657 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA209:rna-TAV2_LOCUS12421,rna-TAV2_LOCUS14921,rna-TAV2_LOCUS14916,rna-TAV2_LOCUS14918 | AT2G36200 | kinesin motor protein-related | GO:0005524|ATP binding;GO:0007018|microtubule-based movement;GO:0005875|microtubule associated complex;GO:0003777|microtubule motor activity | rna-TAV2_LOCUS14616 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA213:rna-TAV2_LOCUS13314,rna-TAV2_LOCUS14361,rna-TAV2_LOCUS14364,rna-TAV2_LOCUS14369 | AT2G21440||AT2G21430||AT4G16190 | cysteine proteinase A494, putative / thiol protease, putative||cysteine proteinase, putative||RNA recognition motif (RRM)-containing protein | GO:0005773|vacuole;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0012505|endomembrane system;GO:0000166|nucleotide binding;GO:0006508|proteolysis | rna-TAV2_LOCUS23735 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA220:rna-TAV2_LOCUS14753,rna-TAV2_LOCUS13819,rna-TAV2_LOCUS12997,rna-TAV2_LOCUS14533 | AT2G37790||AT2G37770||AT2G37760||AT3G53880 | aldo/keto reductase family protein | GO:0016491|oxidoreductase activity;GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0055114|oxidation reduction;GO:0005634|nucleus | rna-TAV2_LOCUS16759 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA225:rna-TAV2_LOCUS15485,rna-TAV2_LOCUS17387,rna-TAV2_LOCUS15486,rna-TAV2_LOCUS17388 | AT3G59240||AT3G59210||AT3G59200||AT3G59190 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS17260 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA227:rna-TAV2_LOCUS15525,rna-TAV2_LOCUS15524,rna-TAV2_LOCUS15523,rna-TAV2_LOCUS17542 | AT3G61290||AT3G61280||AT3G61270||AT2G45830 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: DTA2 (DOWNSTREAM TARGET OF AGL15 2) (TAIR:AT2G45830.1); Has 461 Blast hits to 457 proteins in 95 species: Archae - 0; Bacteria - 32; Metazoa - 201; Fungi - 83; Plants - 117; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61280.1); Has 450 Blast hits to 447 proteins in 91 species: Archae - 0; Bacteria - 32; Metazoa - 199; Fungi - 79; Plants - 112; Viruses - 2; Other Eukaryotes - 26 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61290.1); Has 467 Blast hits to 463 proteins in 98 species: Archae - 0; Bacteria - 38; Metazoa - 201; Fungi - 82; Plants - 115; Viruses - 4; Other Eukaryotes - 27 (source: NCBI BLink).||DTA2; DTA2 (DOWNSTREAM TARGET OF AGL15 2) | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS14178 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA244:rna-TAV2_LOCUS18688,rna-TAV2_LOCUS18689,rna-TAV2_LOCUS21610,rna-TAV2_LOCUS21611 | AT5G55300||AT5G55310 | TOP1ALPHA, TOP1; TOP1ALPHA (DNA TOPOISOMERASE I ALPHA); DNA topoisomerase type I||TOP1BETA, TOP1; TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I | GO:0016020|membrane;GO:0010075|regulation of meristem growth;GO:0009965|leaf morphogenesis;GO:0003917|DNA topoisomerase type I activity;GO:0009793|embryonic development ending in seed dormancy;GO:0009791|post-embryonic development;GO:0005694|chromosome;GO:0006265|DNA topological change | rna-TAV2_LOCUS19424 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA245:rna-TAV2_LOCUS18710,rna-TAV2_LOCUS18706,rna-TAV2_LOCUS19988,rna-TAV2_LOCUS22207 | AT3G09160||AT5G06960||AT5G06950||AT5G06839||AT3G12250 | OBF5, TGA5; OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / protein binding / transcription factor||TGA6, BZIP45; TGA6 (TGACG MOTIF-BINDING FACTOR 6); DNA binding / transcription factor||RNA recognition motif (RRM)-containing protein||AHBP-1B, TGA2; AHBP-1B; DNA binding / transcription activator/ transcription factor/ transcription repressor||bZIP family transcription factor | GO:0009863|salicylic acid mediated signaling pathway;GO:0005515|protein binding;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0003700|transcription factor activity;GO:0005737|cytoplasm;GO:0007165|signal transduction;GO:0016564|transcription repressor activity;GO:0009814|defense response, incompatible interaction;GO:0009410|response to xenobiotic stimulus;GO:0006468|protein amino acid phosphorylation;GO:0000166|nucleotide binding;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | rna-TAV2_LOCUS11558 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA254:rna-TAV2_LOCUS20323,rna-TAV2_LOCUS20807,rna-TAV2_LOCUS20811,rna-TAV2_LOCUS20803 | AT5G01040||AT3G09220||AT5G01190||AT2G38080 | LAC8; LAC8 (laccase 8); laccase||LAC10; LAC10 (laccase 10); laccase||IRX12, LAC4; IRX12 (IRREGULAR XYLEM 12); laccase||LAC7; LAC7 (laccase 7); laccase | GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0046688|response to copper ion;GO:0046274|lignin catabolic process;GO:0008471|laccase activity | rna-TAV2_LOCUS14099 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA272:rna-TAV2_LOCUS24322,rna-TAV2_LOCUS24319,rna-TAV2_LOCUS24320,rna-TAV2_LOCUS23973 | AT4G16550||AT4G16545 | ||heat shock protein-related | ;GO:0006508|proteolysis;GO:0005575|cellular_component | rna-TAV2_LOCUS20609 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA274:rna-TAV2_LOCUS24491,rna-TAV2_LOCUS24492,rna-TAV2_LOCUS24489,rna-TAV2_LOCUS24488 | AT3G03260 | HDG8; HDG8 (HOMEODOMAIN GLABROUS 8); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS10330 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA281:rna-TAV2_LOCUS4786,rna-TAV2_LOCUS4785,rna-TAV2_LOCUS4787,rna-TAV2_LOCUS4791 | AT5G10420||AT5G65380 | ripening-responsive protein, putative||antiporter/ drug transporter | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0009835|ripening;GO:0005215|transporter activity;GO:0015297|antiporter activity | rna-TAV2_LOCUS6959 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA291:rna-TAV2_LOCUS26285,rna-TAV2_LOCUS26286,rna-TAV2_LOCUS26282,rna-TAV2_LOCUS26283 | AT5G10530 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | rna-TAV2_LOCUS4802 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA293:rna-TAV2_LOCUS4455,rna-TAV2_LOCUS4453,rna-TAV2_LOCUS4452,rna-TAV2_LOCUS4451 | AT4G14090||AT4G15550 | UDP-glucoronosyl/UDP-glucosyl transferase family protein||IAGLU; IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE); UDP-glycosyltransferase/ transferase, transferring glycosyl groups | GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS4454 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA305:rna-TAV2_LOCUS1564,rna-TAV2_LOCUS1563,rna-TAV2_LOCUS1562 | AT1G51538||AT1G50820||AT1G51540 | INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571 Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria - 200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other Eukaryotes - 114 (source: NCBI BLink).||unknown protein | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS11484,rna-TAV2_LOCUS8564 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA312:rna-TAV2_LOCUS2325,rna-TAV2_LOCUS2322,rna-TAV2_LOCUS2328 | AT1G01340||AT4G01010||AT1G19780 | ATCNGC10, CNGC10, ACBK1; ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10); calmodulin binding / cyclic nucleotide binding / ion channel||ATCNGC13, CNGC13; ATCNGC13; calmodulin binding / cyclic nucleotide binding / ion channel||ATCNGC8, CNGC8; ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8); calmodulin binding / cyclic nucleotide binding / ion channel | GO:0005516|calmodulin binding;GO:0016020|membrane;GO:0005216|ion channel activity;GO:0030551|cyclic nucleotide binding;GO:0006811|ion transport | rna-TAV2_LOCUS18992,rna-TAV2_LOCUS17197 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA313:rna-TAV2_LOCUS2340,rna-TAV2_LOCUS825,rna-TAV2_LOCUS819 | AT1G10750||AT5G19170||AT1G70550||AT5G50150 | unknown protein | GO:0003674|molecular_function;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006499|N-terminal protein myristoylation | rna-TAV2_LOCUS16457,rna-TAV2_LOCUS21007 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA325:rna-TAV2_LOCUS3186,rna-TAV2_LOCUS3184,rna-TAV2_LOCUS3178 | AT1G61470||AT1G27820||AT1G27890 | CCR4-NOT transcription complex protein, putative | GO:0004540|ribonuclease activity;GO:0005634|nucleus;GO:0009451|RNA modification;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS2053,rna-TAV2_LOCUS26002 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA339:rna-TAV2_LOCUS671,rna-TAV2_LOCUS676,rna-TAV2_LOCUS677 | AT1G54040 | ESP, TASTY, ESR; ESP (EPITHIOSPECIFIER PROTEIN); enzyme regulator | GO:0010150|leaf senescence;GO:0042742|defense response to bacterium;GO:0030234|enzyme regulator activity;GO:0009753|response to jasmonic acid stimulus;GO:0005634|nucleus;GO:0019762|glucosinolate catabolic process | rna-TAV2_LOCUS11412,rna-TAV2_LOCUS23048 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA378:rna-TAV2_LOCUS7626,rna-TAV2_LOCUS7625,rna-TAV2_LOCUS6978 | AT2G45670 | calcineurin B subunit-related | GO:0008415|acyltransferase activity;GO:0008152|metabolic process;GO:0005509|calcium ion binding | rna-TAV2_LOCUS10065,rna-TAV2_LOCUS13462 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA418:rna-TAV2_LOCUS12677,rna-TAV2_LOCUS12682,rna-TAV2_LOCUS12681 | AT2G46760||AT2G46740 | FAD-binding domain-containing protein | GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0016020|membrane;GO:0050660|FAD binding;GO:0005618|cell wall;GO:0003885|D-arabinono-1,4-lactone oxidase activity | rna-TAV2_LOCUS12279,rna-TAV2_LOCUS20434 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA430:rna-TAV2_LOCUS13373,rna-TAV2_LOCUS13377,rna-TAV2_LOCUS13378 | AT2G29940||AT1G59870||AT1G15210 | PEN3, PDR8, ATPDR8; PEN3 (PENETRATION 3); ATPase, coupled to transmembrane movement of substances / cadmium ion transmembrane transporter||PDR3, ATPDR3; PDR3 (PLEIOTROPIC DRUG RESISTANCE 3); ATPase, coupled to transmembrane movement of substances||PDR7, ATPDR7; PDR7 (PLEIOTROPIC DRUG RESISTANCE 7); ATPase, coupled to transmembrane movement of substances | GO:0031348|negative regulation of defense response;GO:0042742|defense response to bacterium;GO:0052544|callose deposition in cell wall during defense response;GO:0016020|membrane;GO:0015691|cadmium ion transport;GO:0015086|cadmium ion transmembrane transporter activity;GO:0009627|systemic acquired resistance;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006855|drug transmembrane transport;GO:0009941|chloroplast envelope;GO:0042344|indole glucosinolate catabolic process;GO:0005886|plasma membrane;GO:0009817|defense response to fungus, incompatible interaction;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS18214,rna-TAV2_LOCUS1088 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA474:rna-TAV2_LOCUS17569,rna-TAV2_LOCUS17573,rna-TAV2_LOCUS15417 | AT1G69850||AT1G69860||AT1G69870||AT1G27040 | ATNRT1:2, NTL1; ATNRT1:2 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1:2); calcium ion binding / transporter||nitrate transporter, putative||proton-dependent oligopeptide transport (POT) family protein | GO:0016020|membrane;GO:0015706|nitrate transport;GO:0005886|plasma membrane;GO:0006857|oligopeptide transport;GO:0005215|transporter activity;GO:0009624|response to nematode;GO:0005509|calcium ion binding | rna-TAV2_LOCUS3535,rna-TAV2_LOCUS17572 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA484:rna-TAV2_LOCUS18665,rna-TAV2_LOCUS19041,rna-TAV2_LOCUS19042 | AT3G46565 | - | - | rna-TAV2_LOCUS20646,rna-TAV2_LOCUS21471 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA512:rna-TAV2_LOCUS21081,rna-TAV2_LOCUS21080,rna-TAV2_LOCUS21078 | AT4G02330||AT4G02320||AT4G02300||AT2G47550||AT1G02810 | ATPMEPCRB; ATPMEPCRB; pectinesterase||pectinesterase family protein | GO:0004857|enzyme inhibitor activity;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity | rna-TAV2_LOCUS13141,rna-TAV2_LOCUS3295 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA553:rna-TAV2_LOCUS24290,rna-TAV2_LOCUS24289,rna-TAV2_LOCUS24288 | AT4G26440||AT1G64770 | NDF2; NDF2 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1); carbohydrate binding / catalytic||WRKY34, ATWRKY34, MSP3; WRKY34 (WRKY DNA-BINDING PROTEIN 34); transcription factor | GO:0009535|chloroplast thylakoid membrane;GO:0003824|catalytic activity;GO:0010598|NAD(P)H dehydrogenase complex (plastoquinone);GO:0006355|regulation of transcription, DNA-dependent;GO:0009773|photosynthetic electron transport in photosystem I;GO:0003700|transcription factor activity;GO:0030246|carbohydrate binding;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS17632,rna-TAV2_LOCUS17633 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA579:rna-TAV2_LOCUS25756,rna-TAV2_LOCUS25755,rna-TAV2_LOCUS25754 | AT4G22390||AT4G12560 | F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G12560.2); Has 662 Blast hits to 662 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 662; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0031348|negative regulation of defense response;GO:0003674|molecular_function;GO:0005737|cytoplasm;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS20333,rna-TAV2_LOCUS25860 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA591:rna-TAV2_LOCUS4206,rna-TAV2_LOCUS4209,rna-TAV2_LOCUS4210 | AT1G32780||AT1G64710 | alcohol dehydrogenase, putative | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0008152|metabolic process | rna-TAV2_LOCUS19317,rna-TAV2_LOCUS469 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA593:rna-TAV2_LOCUS8545,rna-TAV2_LOCUS8547,rna-TAV2_LOCUS8546 | AT5G02040||AT5G05987 | PRA1.A2; PRA1.A2 (PRENYLATED RAB ACCEPTOR 1.A2)||PRA1.A1; PRA1.A1 (PRENYLATED RAB ACCEPTOR 1.A1) | GO:0005783|endoplasmic reticulum;GO:0016192|vesicle-mediated transport;GO:0003674|molecular_function | rna-TAV2_LOCUS18578,rna-TAV2_LOCUS20317 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA595:rna-TAV2_LOCUS8603,rna-TAV2_LOCUS8609,rna-TAV2_LOCUS8610 | AT3G48690||AT1G47480 | ATCXE12, CXE12; CXE12; carboxylesterase||hydrolase | GO:0004091|carboxylesterase activity;GO:0005737|cytoplasm;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0016787|hydrolase activity | rna-TAV2_LOCUS8607,rna-TAV2_LOCUS8608 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA602:rna-TAV2_LOCUS12165,rna-TAV2_LOCUS12157,rna-TAV2_LOCUS12161 | AT4G16730||AT3G25820||AT4G16740 | ATTPS03; ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase||ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase||lyase/ magnesium ion binding | GO:0000287|magnesium ion binding;GO:0016829|lyase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0008152|metabolic process;GO:0050551|myrcene synthase activity;GO:0009611|response to wounding | rna-TAV2_LOCUS12150,rna-TAV2_LOCUS12151 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA877:rna-TAV2_LOCUS7571,rna-TAV2_LOCUS7577 | AT1G56330||AT4G02080||AT3G62560 | SAR1, ATSAR1, ATSARA1B, ATSAR1B; ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding||ASAR1, ATSARA1C, ATSAR2; ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding||GTP-binding protein, putative | GO:0000300|peripheral to membrane of membrane fraction;GO:0005829|cytosol;GO:0006888|ER to Golgi vesicle-mediated transport;GO:0006886|intracellular protein transport;GO:0005622|intracellular;GO:0005886|plasma membrane;GO:0005525|GTP binding;GO:0012505|endomembrane system;GO:0005783|endoplasmic reticulum | rna-TAV2_LOCUS163,rna-TAV2_LOCUS18192,rna-TAV2_LOCUS2740 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA984:rna-TAV2_LOCUS11524,rna-TAV2_LOCUS11526 | AT3G01150||AT5G53180 | PTB, ATPTB1, PTB1; PTB1 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 1); RNA binding / nucleic acid binding / nucleotide binding||ATPTB2, PTB2; PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2); RNA binding / nucleic acid binding / nucleotide binding | GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0009846|pollen germination;GO:0005737|cytoplasm;GO:0000166|nucleotide binding;GO:0005634|nucleus | rna-TAV2_LOCUS21690,rna-TAV2_LOCUS2168,rna-TAV2_LOCUS18407 | 5 | 1 | Thlaspi arvense | Tarvense | |||
| TA310:rna-TAV2_LOCUS2061,rna-TAV2_LOCUS2060,rna-TAV2_LOCUS3657;TA664:rna-TAV2_LOCUS2279,rna-TAV2_LOCUS751 | AT1G22540||AT1G22550||AT1G22570 | proton-dependent oligopeptide transport (POT) family protein | GO:0006857|oligopeptide transport;GO:0005215|transporter activity;GO:0016020|membrane | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA322:rna-TAV2_LOCUS3089,rna-TAV2_LOCUS1559,rna-TAV2_LOCUS1558;TA729:rna-TAV2_LOCUS3863,rna-TAV2_LOCUS3864 | AT1G47600 | BGLU34; BGLU34 (BETA GLUCOSIDASE 34); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | GO:0019137|thioglucosidase activity;GO:0008422|beta-glucosidase activity;GO:0019760|glucosinolate metabolic process;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009651|response to salt stress | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA341:rna-TAV2_LOCUS891,rna-TAV2_LOCUS2447,rna-TAV2_LOCUS2438;TA1236:rna-TAV2_LOCUS16625,rna-TAV2_LOCUS16627 | AT3G58930||AT3G58940||AT3G59000 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA360:rna-TAV2_LOCUS6598,rna-TAV2_LOCUS6603,rna-TAV2_LOCUS6604;TA709:rna-TAV2_LOCUS3373,rna-TAV2_LOCUS3372 | AT5G44120||AT1G03890||AT1G03880 | cupin family protein||CRA1, ATCRA1, CRU1; CRA1 (CRUCIFERINA); nutrient reservoir||CRU2, CRB; CRU2 (CRUCIFERIN 2); nutrient reservoir | GO:0009737|response to abscisic acid stimulus;GO:0009845|seed germination;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0045735|nutrient reservoir activity | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA381:rna-TAV2_LOCUS10224,rna-TAV2_LOCUS10725,rna-TAV2_LOCUS9648;TA1584:rna-TAV2_LOCUS24598,rna-TAV2_LOCUS24599 | ATCG00350||ATCG00340 | PSAB; Encodes the D1 subunit of photosystem I and II reaction centers.||PSAA; Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. | GO:0009507|chloroplast;GO:0009579|thylakoid;GO:0016020|membrane | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA406:rna-TAV2_LOCUS9128,rna-TAV2_LOCUS9125,rna-TAV2_LOCUS9124;TA660:rna-TAV2_LOCUS2154,rna-TAV2_LOCUS2155 | AT3G18470||AT3G18460||AT1G49030 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA414:rna-TAV2_LOCUS12420,rna-TAV2_LOCUS14922,rna-TAV2_LOCUS14917;TA1171:rna-TAV2_LOCUS14913,rna-TAV2_LOCUS14914 | AT2G37500 | arginine biosynthesis protein ArgJ family | GO:0009507|chloroplast;GO:0006526|arginine biosynthetic process;GO:0004358|glutamate N-acetyltransferase activity | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA460:rna-TAV2_LOCUS16472,rna-TAV2_LOCUS16473,rna-TAV2_LOCUS16471;TA1210:rna-TAV2_LOCUS15922,rna-TAV2_LOCUS15923 | AT3G50210||AT3G49630 | 2-oxoacid-dependent oxidase, putative | GO:0016491|oxidoreductase activity;GO:0005506|iron ion binding;GO:0009267|cellular response to starvation;GO:0007568|aging;GO:0012505|endomembrane system | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA501:rna-TAV2_LOCUS19711,rna-TAV2_LOCUS19712,rna-TAV2_LOCUS19714;TA1287:rna-TAV2_LOCUS17659,rna-TAV2_LOCUS17248 | AT5G16370||AT5G16330||AT5G16360 | AAE5; AAE5 (ACYL ACTIVATING ENZYME 5); catalytic||NC domain-containing protein | GO:0003674|molecular_function;GO:0003824|catalytic activity;GO:0005777|peroxisome;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0008150|biological_process | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA524:rna-TAV2_LOCUS21997,rna-TAV2_LOCUS21991,rna-TAV2_LOCUS21994;TA694:rna-TAV2_LOCUS3073,rna-TAV2_LOCUS3072 | AT4G01430||AT4G01440||AT4G01450||AT1G01070 | nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0016020|membrane | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA525:rna-TAV2_LOCUS22005,rna-TAV2_LOCUS22006,rna-TAV2_LOCUS22007;TA930:rna-TAV2_LOCUS10221,rna-TAV2_LOCUS10726 | AT5G08670||AT5G08680||ATCG00480 | ATP synthase beta chain, mitochondrial, putative||ATPB; chloroplast-encoded gene for beta subunit of ATP synthase||ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism | GO:0005507|copper ion binding;GO:0050897|cobalt ion binding;GO:0016020|membrane;GO:0005747|mitochondrial respiratory chain complex I;GO:0008270|zinc ion binding;GO:0000275|mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);GO:0046933|hydrogen ion transporting ATP synthase activity, rotational mechanism;GO:0005618|cell wall;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0031977|thylakoid lumen;GO:0006979|response to oxidative stress | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA554:rna-TAV2_LOCUS24350,rna-TAV2_LOCUS24351,rna-TAV2_LOCUS24348;TA1154:rna-TAV2_LOCUS14434,rna-TAV2_LOCUS12480 | AT4G30550||AT4G30540||AT4G30530||AT2G23970||AT2G23960 | defense-related protein, putative||glutamine amidotransferase class-I domain-containing protein | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006952|defense response | - | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA747:rna-TAV2_LOCUS718,rna-TAV2_LOCUS719;TA1007:rna-TAV2_LOCUS8899,rna-TAV2_LOCUS10847 | AT1G55570||AT1G55560||AT3G13400||AT3G13390 | sks13; sks13 (SKU5 Similar 13); copper ion binding / oxidoreductase||sks12; sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase||sks11; sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase||sks14; sks14 (SKU5 Similar 14); copper ion binding / oxidoreductase | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0016491|oxidoreductase activity | rna-TAV2_LOCUS18907 | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA778:rna-TAV2_LOCUS5525,rna-TAV2_LOCUS5516;TA957:rna-TAV2_LOCUS10953,rna-TAV2_LOCUS10952 | AT5G28020||AT5G28030||AT3G04940||AT4G14880 | ATCYSD1, CYSD1; CYSD1 (CYSTEINE SYNTHASE D1); cysteine synthase||CYSD2, ATCYSD2; CYSD2 (CYSTEINE SYNTHASE D2); catalytic/ cysteine synthase/ pyridoxal phosphate binding||OASA1, CYTACS1; OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase||cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative | GO:0019344|cysteine biosynthetic process;GO:0005829|cytosol;GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0016020|membrane;GO:0005777|peroxisome;GO:0005515|protein binding;GO:0046686|response to cadmium ion;GO:0004124|cysteine synthase activity;GO:0006535|cysteine biosynthetic process from serine;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0048046|apoplast;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS20533 | 5 | 2 | Thlaspi arvense | Tarvense | |||
| TA1000:rna-TAV2_LOCUS11837,rna-TAV2_LOCUS9719 | AT2G34460 | flavin reductase-related | GO:0005488|binding;GO:0003824|catalytic activity;GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0044237|cellular metabolic process;GO:0050662|coenzyme binding | rna-TAV2_LOCUS13611,rna-TAV2_LOCUS25921 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1013:rna-TAV2_LOCUS9056,rna-TAV2_LOCUS9057 | AT1G50410||AT3G20010 | SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0003677|DNA binding | rna-TAV2_LOCUS10251,rna-TAV2_LOCUS1715 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1028:rna-TAV2_LOCUS9300,rna-TAV2_LOCUS9301 | AT3G24290||AT3G24300||AT4G13510||AT4G28700 | AMT1;4; AMT1;4 (AMMONIUM TRANSPORTER 1;4); ammonium transmembrane transporter/ high affinity secondary active ammonium transmembrane transporter||AMT1;1, ATAMT1, ATAMT1;1; AMT1;1 (AMMONIUM TRANSPORTER 1;1); ammonium transmembrane transporter||AMT1;3, ATAMT1;3; AMT1;3 (AMMONIUM TRANSPORTER 1;3); ammonium transmembrane transporter||AMT1;5; AMT1;5 (AMMONIUM TRANSPORTER 1;5); ammonium transmembrane transporter | GO:0016020|membrane;GO:0008519|ammonium transmembrane transporter activity;GO:0015398|high affinity secondary active ammonium transmembrane transporter activity;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0015696|ammonium transport;GO:0006810|transport;GO:0051258|protein polymerization;GO:0005634|nucleus | rna-TAV2_LOCUS23228,rna-TAV2_LOCUS26020 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1043:rna-TAV2_LOCUS9668,rna-TAV2_LOCUS9266 | AT4G18330||AT1G04170 | EIF2 GAMMA; EIF2 GAMMA; translation factor, nucleic acid binding / translation initiation factor||eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0003924|GTPase activity;GO:0005525|GTP binding;GO:0008135|translation factor activity, nucleic acid binding | rna-TAV2_LOCUS24502,rna-TAV2_LOCUS12170 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1082:rna-TAV2_LOCUS12937,rna-TAV2_LOCUS12935 | AT2G14755 | - | - | rna-TAV2_LOCUS5461,rna-TAV2_LOCUS24188 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1098:rna-TAV2_LOCUS13447,rna-TAV2_LOCUS13443 | AT2G39640 | glycosyl hydrolase family 17 protein | GO:0043169|cation binding;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0003824|catalytic activity | rna-TAV2_LOCUS12400,rna-TAV2_LOCUS14793 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1099:rna-TAV2_LOCUS13449,rna-TAV2_LOCUS13455 | AT2G24720||AT3G09630||AT5G02870 | ATGLR2.2, GLR2.2; ATGLR2.2; intracellular ligand-gated ion channel||60S ribosomal protein L4/L1 (RPL4A)||60S ribosomal protein L4/L1 (RPL4D) | GO:0005773|vacuole;GO:0006412|translation;GO:0006874|cellular calcium ion homeostasis;GO:0005840|ribosome;GO:0016020|membrane;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0005217|intracellular ligand-gated ion channel activity;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0005618|cell wall;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0009416|response to light stimulus;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS10467,rna-TAV2_LOCUS18699 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1109:rna-TAV2_LOCUS13663,rna-TAV2_LOCUS13662 | AT2G23080||AT2G23070||AT5G67380||AT3G50000 | CKA1, ATCKA1; CKA1 (CASEIN KINASE ALPHA 1); kinase||CKA2, ATCKA2; CKA2 (CASEIN KINASE II, ALPHA CHAIN 2); kinase||casein kinase II alpha chain, putative | GO:0016301|kinase activity;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS7395,rna-TAV2_LOCUS15604 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1141:rna-TAV2_LOCUS14169,rna-TAV2_LOCUS14165 | AT2G47250||AT3G62310 | RNA helicase, putative | GO:0017111|nucleoside-triphosphatase activity;GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0016020|membrane;GO:0005730|nucleolus;GO:0009941|chloroplast envelope;GO:0005524|ATP binding;GO:0000166|nucleotide binding;GO:0003724|RNA helicase activity;GO:0008026|ATP-dependent helicase activity | rna-TAV2_LOCUS17847,rna-TAV2_LOCUS6318 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1147:rna-TAV2_LOCUS14268,rna-TAV2_LOCUS14267 | AT2G44630||AT4G02310||AT2G44700 | kelch repeat-containing F-box family protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS12435,rna-TAV2_LOCUS13260 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1167:rna-TAV2_LOCUS14762,rna-TAV2_LOCUS13009 | AT3G62850 | zinc finger protein-related | GO:0008150|biological_process;GO:0005622|intracellular;GO:0008270|zinc ion binding | rna-TAV2_LOCUS13100,rna-TAV2_LOCUS13139 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1175:rna-TAV2_LOCUS14960,rna-TAV2_LOCUS13929 | AT2G40590||AT3G56340 | 40S ribosomal protein S26 (RPS26C)||40S ribosomal protein S26 (RPS26B) | GO:0006412|translation;GO:0005840|ribosome;GO:0016020|membrane;GO:0042254|ribosome biogenesis;GO:0022627|cytosolic small ribosomal subunit;GO:0003735|structural constituent of ribosome | rna-TAV2_LOCUS16359,rna-TAV2_LOCUS4414 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1205:rna-TAV2_LOCUS15828,rna-TAV2_LOCUS15805 | AT1G77950||AT1G77980||AT1G60720 | AGL66; AGL66 (AGAMOUS-LIKE 66); transcription factor||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33710.1); Has 408 Blast hits to 400 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 408; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||AGL67; AGL67 (AGAMOUS-LIKE 67); transcription factor | GO:0003674|molecular_function;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009555|pollen development;GO:0045449|regulation of transcription;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS24562,rna-TAV2_LOCUS2609 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1253:rna-TAV2_LOCUS16965,rna-TAV2_LOCUS18118 | - | - | - | rna-TAV2_LOCUS13025,rna-TAV2_LOCUS23903 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1379:rna-TAV2_LOCUS19685,rna-TAV2_LOCUS19681 | AT4G00800||AT4G00810 | 60S acidic ribosomal protein P1 (RPP1B)||binding / protein binding / zinc ion binding | GO:0005488|binding;GO:0005840|ribosome;GO:0005829|cytosol;GO:0005515|protein binding;GO:0003735|structural constituent of ribosome;GO:0008270|zinc ion binding;GO:0022626|cytosolic ribosome;GO:0006414|translational elongation;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | rna-TAV2_LOCUS19485,rna-TAV2_LOCUS19680 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1408:rna-TAV2_LOCUS20153,rna-TAV2_LOCUS18744 | AT4G23900||AT4G11010 | NDPK3; NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3); ATP binding / nucleoside diphosphate kinase||nucleoside diphosphate kinase 4 (NDK4) | GO:0006183|GTP biosynthetic process;GO:0009536|plastid;GO:0050897|cobalt ion binding;GO:0005743|mitochondrial inner membrane;GO:0006241|CTP biosynthetic process;GO:0004550|nucleoside diphosphate kinase activity;GO:0005524|ATP binding;GO:0008270|zinc ion binding;GO:0006228|UTP biosynthetic process;GO:0005739|mitochondrion;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS24899,rna-TAV2_LOCUS20148 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1417:rna-TAV2_LOCUS20272,rna-TAV2_LOCUS21746 | AT5G15870||AT5G15760||AT1G68590 | plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putative||glycosyl hydrolase family 81 protein | GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0009536|plastid;GO:0005840|ribosome;GO:0006412|translation;GO:0009535|chloroplast thylakoid membrane;GO:0005622|intracellular;GO:0003735|structural constituent of ribosome;GO:0033903|endo-1,3(4)-beta-glucanase activity;GO:0009579|thylakoid;GO:0009507|chloroplast | rna-TAV2_LOCUS146,rna-TAV2_LOCUS4296 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1419:rna-TAV2_LOCUS20354,rna-TAV2_LOCUS20355 | AT5G07470||AT5G07460||AT5G61640||AT4G25130 | PMSR1, ATMSRA1; PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase||PMSR2, ATMSRA2; PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase||peptide methionine sulfoxide reductase, putative||PMSR3, ATMSRA3; PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | GO:0005829|cytosol;GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;GO:0008113|peptide-methionine-(S)-S-oxide reductase activity;GO:0009570|chloroplast stroma;GO:0006979|response to oxidative stress;GO:0006464|protein modification process | rna-TAV2_LOCUS6920,rna-TAV2_LOCUS24480 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1455:rna-TAV2_LOCUS21422,rna-TAV2_LOCUS21428 | AT5G04130||AT5G04110||AT3G10270 | DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative||DNA topoisomerase II family protein||ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) | GO:0006259|DNA metabolic process;GO:0005524|ATP binding;GO:0005737|cytoplasm;GO:0003918|DNA topoisomerase (ATP-hydrolyzing) activity;GO:0005694|chromosome;GO:0009295|nucleoid;GO:0005739|mitochondrion;GO:0006265|DNA topological change;GO:0003677|DNA binding | rna-TAV2_LOCUS9642,rna-TAV2_LOCUS5974 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1471:rna-TAV2_LOCUS21814,rna-TAV2_LOCUS20812 | AT4G14695||AT4G22310 | unknown protein | GO:0005739|mitochondrion;GO:0008150|biological_process | rna-TAV2_LOCUS25749,rna-TAV2_LOCUS26120 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1482:rna-TAV2_LOCUS22106,rna-TAV2_LOCUS19664 | AT5G52882||AT4G28000||AT1G64110 | AAA-type ATPase family protein||ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||ATP binding / nucleoside-triphosphatase/ nucleotide binding | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0000166|nucleotide binding | rna-TAV2_LOCUS24159,rna-TAV2_LOCUS7058 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1504:rna-TAV2_LOCUS22834,rna-TAV2_LOCUS24028 | AT4G14560||AT4G14550||AT3G23050||AT1G04250 | IAA1, AXR5; IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); protein binding / transcription factor||AXR3, IAA17; AXR3 (AUXIN RESISTANT 3); transcription factor||IAA14, SLR; IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor||IAA7, AXR2; IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | GO:0009630|gravitropism;GO:0009734|auxin mediated signaling pathway;GO:0005515|protein binding;GO:0008180|signalosome;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0000502|proteasome complex;GO:0010102|lateral root morphogenesis;GO:0040008|regulation of growth;GO:0016564|transcription repressor activity;GO:0009414|response to water deprivation;GO:0009753|response to jasmonic acid stimulus;GO:0019005|SCF ubiquitin ligase complex;GO:0005634|nucleus;GO:0009611|response to wounding | rna-TAV2_LOCUS11218,rna-TAV2_LOCUS3835 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1528:rna-TAV2_LOCUS23430,rna-TAV2_LOCUS25834 | AT3G03260 | HDG8; HDG8 (HOMEODOMAIN GLABROUS 8); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS10330,rna-TAV2_LOCUS23071 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1611:rna-TAV2_LOCUS25375,rna-TAV2_LOCUS25383 | AT4G17718||AT4G17713 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | rna-TAV2_LOCUS24772,rna-TAV2_LOCUS25376 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1633:rna-TAV2_LOCUS25786,rna-TAV2_LOCUS23172 | AT4G27480||AT5G39990||AT5G15050 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016051|carbohydrate biosynthetic process;GO:0016020|membrane;GO:0012505|endomembrane system;GO:0006499|N-terminal protein myristoylation;GO:0008375|acetylglucosaminyltransferase activity | rna-TAV2_LOCUS23254,rna-TAV2_LOCUS22120 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1635:rna-TAV2_LOCUS25794,rna-TAV2_LOCUS25789 | AT4G14070||AT3G23790||AT3G23770 | AMP-binding protein, putative||glycosyl hydrolase family 17 protein||AAE15; AAE15 (acyl-activating enzyme 15); long-chain-fatty-acid-[acyl-carrier-protein] ligase | GO:0008922|long-chain-fatty-acid-[acyl-carrier-protein] ligase activity;GO:0009536|plastid;GO:0003824|catalytic activity;GO:0009941|chloroplast envelope;GO:0030497|fatty acid elongation;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009507|chloroplast;GO:0043169|cation binding | rna-TAV2_LOCUS10624,rna-TAV2_LOCUS10625 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1689:rna-TAV2_LOCUS8416,rna-TAV2_LOCUS8417 | AT3G24240 | leucine-rich repeat transmembrane protein kinase, putative | GO:0004672|protein kinase activity;GO:0012505|endomembrane system;GO:0005515|protein binding | rna-TAV2_LOCUS4426,rna-TAV2_LOCUS11729 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA169:rna-TAV2_LOCUS1186,rna-TAV2_LOCUS1189,rna-TAV2_LOCUS1190,rna-TAV2_LOCUS3799 | AT4G15970 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1727:rna-TAV2_LOCUS12094,rna-TAV2_LOCUS12093 | AT1G60500 | dynamin family protein | GO:0005525|GTP binding;GO:0005575|cellular_component;GO:0003924|GTPase activity;GO:0008150|biological_process | rna-TAV2_LOCUS4853,rna-TAV2_LOCUS4852 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1731:rna-TAV2_LOCUS4115,rna-TAV2_LOCUS4114 | AT1G15950||AT1G80820 | CCR2, ATCCR2; CCR2 (CINNAMOYL COA REDUCTASE); cinnamoyl-CoA reductase||CCR1, IRX4, ATCCR1; CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | GO:0016621|cinnamoyl-CoA reductase activity;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0009809|lignin biosynthetic process | rna-TAV2_LOCUS1317,rna-TAV2_LOCUS16068 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1739:rna-TAV2_LOCUS15113,rna-TAV2_LOCUS15115 | AT5G27530||AT4G35670||AT3G15720||AT4G32375 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0046658|anchored to plasma membrane;GO:0010583|response to cyclopentenone;GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0031225|anchored to membrane;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | rna-TAV2_LOCUS15114,rna-TAV2_LOCUS8300 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA173:rna-TAV2_LOCUS2282,rna-TAV2_LOCUS2285,rna-TAV2_LOCUS2284,rna-TAV2_LOCUS3726 | AT1G20510||AT1G20500||AT5G38120||AT1G20480 | 4-coumarate-CoA ligase||OPCL1; OPCL1 (OPC-8:0 COA LIGASE1); 4-coumarate-CoA ligase||4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | GO:0009698|phenylpropanoid metabolic process;GO:0005777|peroxisome;GO:0016207|4-coumarate-CoA ligase activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0009695|jasmonic acid biosynthetic process;GO:0009611|response to wounding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA174:rna-TAV2_LOCUS2394,rna-TAV2_LOCUS2393,rna-TAV2_LOCUS2395,rna-TAV2_LOCUS2397 | AT1G16160||AT1G16150||AT1G79670 | RFO1, WAKL22; RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase||WAKL4; WAKL4 (WALL ASSOCIATED KINASE-LIKE 4); kinase||WAKL5; WAKL5 (wall associated kinase-like 5); kinase | GO:0016301|kinase activity;GO:0010045|response to nickel ion;GO:0046686|response to cadmium ion;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0005618|cell wall;GO:0006468|protein amino acid phosphorylation;GO:0009620|response to fungus;GO:0009507|chloroplast;GO:0009986|cell surface;GO:0010043|response to zinc ion | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1750:rna-TAV2_LOCUS26241,rna-TAV2_LOCUS26229 | AT2G47110||AT2G35635||AT1G23410 | UBQ7, RUB2; UBQ7; protein binding||ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA)||UBQ6; UBQ6; protein binding | GO:0042787|protein ubiquitination during ubiquitin-dependent protein catabolic process;GO:0006412|translation;GO:0005515|protein binding;GO:0022627|cytosolic small ribosomal subunit;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0006464|protein modification process | rna-TAV2_LOCUS24558,rna-TAV2_LOCUS3930 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA176:rna-TAV2_LOCUS3011,rna-TAV2_LOCUS3010,rna-TAV2_LOCUS3009,rna-TAV2_LOCUS3004 | AT1G24145 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA178:rna-TAV2_LOCUS3449,rna-TAV2_LOCUS3448,rna-TAV2_LOCUS3968,rna-TAV2_LOCUS3451 | AT1G52790||AT1G52800||AT1G52810||AT1G52820 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||2-oxoglutarate-dependent dioxygenase-related||2-oxoglutarate-dependent dioxygenase, putative | GO:0005575|cellular_component;GO:0016491|oxidoreductase activity;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA180:rna-TAV2_LOCUS5173,rna-TAV2_LOCUS6374,rna-TAV2_LOCUS6377,rna-TAV2_LOCUS6376 | AT5G44950||AT2G26030 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA184:rna-TAV2_LOCUS5839,rna-TAV2_LOCUS5842,rna-TAV2_LOCUS7008,rna-TAV2_LOCUS7006 | AT1G80470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G16930.1); Has 1270 Blast hits to 1243 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA185:rna-TAV2_LOCUS5853,rna-TAV2_LOCUS5852,rna-TAV2_LOCUS5855,rna-TAV2_LOCUS5854 | AT1G64030||AT2G14540 | serpin family protein / serine protease inhibitor family protein | GO:0004867|serine-type endopeptidase inhibitor activity;GO:0005829|cytosol;GO:0006281|DNA repair;GO:0006974|response to DNA damage stimulus;GO:0005634|nucleus | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA188:rna-TAV2_LOCUS6468,rna-TAV2_LOCUS5729,rna-TAV2_LOCUS6901,rna-TAV2_LOCUS6900 | AT5G65060||AT5G65070 | MAF3, FCL3, AGL70; MAF3 (MADS AFFECTING FLOWERING 3); transcription factor||MAF4, FCL4, AGL69; MAF4 (MADS AFFECTING FLOWERING 4); transcription factor | GO:0009910|negative regulation of flower development;GO:0005886|plasma membrane;GO:0005634|nucleus;GO:0003700|transcription factor activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA189:rna-TAV2_LOCUS6835,rna-TAV2_LOCUS6836,rna-TAV2_LOCUS6837,rna-TAV2_LOCUS6838 | AT3G28840||AT3G28830||AT3G28790||AT3G28780 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0010584|pollen exine formation;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA190:rna-TAV2_LOCUS7318,rna-TAV2_LOCUS6165,rna-TAV2_LOCUS6172,rna-TAV2_LOCUS5329 | AT5G45520||AT5G45500 | unknown protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA191:rna-TAV2_LOCUS7581,rna-TAV2_LOCUS7583,rna-TAV2_LOCUS5286,rna-TAV2_LOCUS5285 | AT1G60240||AT1G60280 | apical meristem formation protein-related||ANAC023; ANAC023 (Arabidopsis NAC domain containing protein 23); transcription factor | GO:0005575|cellular_component;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA192:rna-TAV2_LOCUS7613,rna-TAV2_LOCUS6433,rna-TAV2_LOCUS5239,rna-TAV2_LOCUS5242 | AT5G67150||AT5G67160 | transferase family protein||EPS1; EPS1 (ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1); transferase/ transferase, transferring acyl groups other than amino-acyl groups | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0016740|transferase activity;GO:0009697|salicylic acid biosynthetic process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA193:rna-TAV2_LOCUS8005,rna-TAV2_LOCUS8006,rna-TAV2_LOCUS8003,rna-TAV2_LOCUS8004 | AT5G47160||AT5G47150 | YDG/SRA domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA194:rna-TAV2_LOCUS8145,rna-TAV2_LOCUS8146,rna-TAV2_LOCUS8150,rna-TAV2_LOCUS8152 | AT1G62540||AT1G62600||AT1G62620 | FMO GS-OX2; FMO GS-OX2 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 2); 3-methylthiopropyl glucosinolate S-oxygenase/ 4-methylthiopropyl glucosinolate S-oxygenase/ 5-methylthiopropyl glucosinolate S-oxygenase/ 7-methylthiopropyl glucosinolate S-oxygenase/ 8-methyl||flavin-containing monooxygenase family protein / FMO family protein | GO:0005773|vacuole;GO:0004499|flavin-containing monooxygenase activity;GO:0004497|monooxygenase activity;GO:0050660|FAD binding;GO:0019761|glucosinolate biosynthetic process;GO:0050661|NADP or NADPH binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009055|electron carrier activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA195:rna-TAV2_LOCUS10100,rna-TAV2_LOCUS10103,rna-TAV2_LOCUS10102,rna-TAV2_LOCUS10108 | AT2G18193 | AAA-type ATPase family protein | GO:0016887|ATPase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA196:rna-TAV2_LOCUS10182,rna-TAV2_LOCUS11005,rna-TAV2_LOCUS11003,rna-TAV2_LOCUS9123 | AT3G23530||AT3G23510||AT3G23470 | cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative||cyclopropane-fatty-acyl-phospholipid synthase | GO:0016491|oxidoreductase activity;GO:0008610|lipid biosynthetic process;GO:0012505|endomembrane system;GO:0008825|cyclopropane-fatty-acyl-phospholipid synthase activity;GO:0009055|electron carrier activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA204:rna-TAV2_LOCUS9399,rna-TAV2_LOCUS9391,rna-TAV2_LOCUS9392,rna-TAV2_LOCUS10544 | AT1G28030 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0010302|2-oxoglutarate-dependent dioxygenase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA210:rna-TAV2_LOCUS12503,rna-TAV2_LOCUS12504,rna-TAV2_LOCUS12499,rna-TAV2_LOCUS12500 | AT2G36710 | pectinesterase family protein | GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA211:rna-TAV2_LOCUS12638,rna-TAV2_LOCUS14553,rna-TAV2_LOCUS12641,rna-TAV2_LOCUS13717 | AT2G44260||AT2G44240||AT2G44230||AT2G44210 | unknown protein | GO:0003674|molecular_function;GO:0009507|chloroplast;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006499|N-terminal protein myristoylation;GO:0006979|response to oxidative stress | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA212:rna-TAV2_LOCUS12852,rna-TAV2_LOCUS13838,rna-TAV2_LOCUS12788,rna-TAV2_LOCUS14230 | AT4G13965||AT3G26922 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G52680.2).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G55030.1); Has 1305 Blast hits to 1279 proteins in 17 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 4; Plants - 1281; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA215:rna-TAV2_LOCUS13453,rna-TAV2_LOCUS13451,rna-TAV2_LOCUS13450,rna-TAV2_LOCUS13457 | AT1G64840 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA216:rna-TAV2_LOCUS14289,rna-TAV2_LOCUS12533,rna-TAV2_LOCUS12532,rna-TAV2_LOCUS12526 | AT2G42480||AT2G42460 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA217:rna-TAV2_LOCUS14362,rna-TAV2_LOCUS14366,rna-TAV2_LOCUS14363,rna-TAV2_LOCUS14368 | AT3G17310 | methyltransferase family protein | GO:0008168|methyltransferase activity;GO:0005575|cellular_component;GO:0006306|DNA methylation;GO:0003677|DNA binding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA218:rna-TAV2_LOCUS14514,rna-TAV2_LOCUS14515,rna-TAV2_LOCUS13502,rna-TAV2_LOCUS13501 | AT2G22155 | Encodes a ECA1 gametogenesis related family protein | GO:0012505|endomembrane system | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA221:rna-TAV2_LOCUS14798,rna-TAV2_LOCUS14799,rna-TAV2_LOCUS14796,rna-TAV2_LOCUS14797 | AT2G27970||AT2G27960 | CKS2; CKS2 (CDK-subunit 2); cyclin-dependent protein kinase/ cyclin-dependent protein kinase regulator||CKS1, CKS1AT; CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1); cyclin-dependent protein kinase/ protein binding | GO:0051726|regulation of cell cycle;GO:0005515|protein binding;GO:0007049|cell cycle;GO:0016538|cyclin-dependent protein kinase regulator activity;GO:0005737|cytoplasm;GO:0004693|cyclin-dependent protein kinase activity;GO:0042023|DNA endoreduplication;GO:0005634|nucleus;GO:0000278|mitotic cell cycle | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA223:rna-TAV2_LOCUS15472,rna-TAV2_LOCUS15470,rna-TAV2_LOCUS15468,rna-TAV2_LOCUS15467 | AT3G48300||AT3G48310||AT3G48270 | CYP71A23; CYP71A23; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A26; CYP71A26; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A22; CYP71A22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0019825|oxygen binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA224:rna-TAV2_LOCUS15474,rna-TAV2_LOCUS15475,rna-TAV2_LOCUS15476,rna-TAV2_LOCUS15830 | AT3G02700 | NC domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA226:rna-TAV2_LOCUS15511,rna-TAV2_LOCUS15506,rna-TAV2_LOCUS15505,rna-TAV2_LOCUS15508 | AT1G65630||AT1G65640 | DegP4; DegP4 (DegP protease 4); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase||DegP3; DegP3 (DegP protease 3); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | GO:0004252|serine-type endopeptidase activity;GO:0005515|protein binding;GO:0005739|mitochondrion;GO:0003824|catalytic activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA228:rna-TAV2_LOCUS16114,rna-TAV2_LOCUS16117,rna-TAV2_LOCUS16116,rna-TAV2_LOCUS16119 | AT1G75880||AT1G75890||AT1G75900||AT1G75930 | family II extracellular lipase 3 (EXL3)||family II extracellular lipase 2 (EXL2)||family II extracellular lipase 1 (EXL1)||EXL6; EXL6; acyltransferase/ carboxylesterase/ lipase | GO:0005576|extracellular region;GO:0004091|carboxylesterase activity;GO:0019953|sexual reproduction;GO:0016298|lipase activity;GO:0008415|acyltransferase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA230:rna-TAV2_LOCUS16190,rna-TAV2_LOCUS16189,rna-TAV2_LOCUS18130,rna-TAV2_LOCUS18126 | AT1G66760||AT1G66780 | MATE efflux family protein | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0005215|transporter activity;GO:0015297|antiporter activity;GO:0009611|response to wounding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA233:rna-TAV2_LOCUS16682,rna-TAV2_LOCUS16681,rna-TAV2_LOCUS17234,rna-TAV2_LOCUS15481 | - | - | - | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA234:rna-TAV2_LOCUS16914,rna-TAV2_LOCUS16916,rna-TAV2_LOCUS16919,rna-TAV2_LOCUS16918 | AT3G51440||AT3G51420 | SSL4, ATSSL4; SSL4 (STRICTOSIDINE SYNTHASE-LIKE 4); strictosidine synthase||strictosidine synthase family protein | GO:0016844|strictosidine synthase activity;GO:0012505|endomembrane system;GO:0009821|alkaloid biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0009058|biosynthetic process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA236:rna-TAV2_LOCUS17446,rna-TAV2_LOCUS17443,rna-TAV2_LOCUS17442,rna-TAV2_LOCUS17445 | AT3G46280 | protein kinase-related | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA238:rna-TAV2_LOCUS18216,rna-TAV2_LOCUS17063,rna-TAV2_LOCUS17065,rna-TAV2_LOCUS17066 | - | - | - | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA240:rna-TAV2_LOCUS18257,rna-TAV2_LOCUS18266,rna-TAV2_LOCUS18265,rna-TAV2_LOCUS18264 | AT1G71390 | AtRLP11; AtRLP11 (Receptor Like Protein 11); protein binding | GO:0012505|endomembrane system | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA241:rna-TAV2_LOCUS18292,rna-TAV2_LOCUS16321,rna-TAV2_LOCUS16320,rna-TAV2_LOCUS16329 | AT1G74020||AT1G74000||AT1G74010 | strictosidine synthase family protein||SS2; SS2 (STRICTOSIDINE SYNTHASE 2); strictosidine synthase||SS3; SS3 (STRICTOSIDINE SYNTHASE 3); strictosidine synthase | GO:0005773|vacuole;GO:0016844|strictosidine synthase activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0009753|response to jasmonic acid stimulus;GO:0009058|biosynthetic process;GO:0009611|response to wounding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA243:rna-TAV2_LOCUS18638,rna-TAV2_LOCUS18636,rna-TAV2_LOCUS21102,rna-TAV2_LOCUS21105 | AT5G54010||AT4G09500||AT5G53990||AT1G64910 | glycosyltransferase family protein | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0012505|endomembrane system | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA246:rna-TAV2_LOCUS19121,rna-TAV2_LOCUS19126,rna-TAV2_LOCUS19517,rna-TAV2_LOCUS19518 | AT5G55050 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0016298|lipase activity;GO:0006629|lipid metabolic process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA247:rna-TAV2_LOCUS19149,rna-TAV2_LOCUS19150,rna-TAV2_LOCUS19147,rna-TAV2_LOCUS19153 | AT5G22860 | serine carboxypeptidase S28 family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0008233|peptidase activity;GO:0008236|serine-type peptidase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA248:rna-TAV2_LOCUS19417,rna-TAV2_LOCUS19423,rna-TAV2_LOCUS19422,rna-TAV2_LOCUS19421 | AT5G55880||AT5G54330||AT5G55500 | ATXYLT, XYLT; XYLT (ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE); xylosyltransferase||unknown protein | GO:0003674|molecular_function;GO:0000139|Golgi membrane;GO:0031204|posttranslational protein targeting to membrane, translocation;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0042285|xylosyltransferase activity;GO:0006487|protein amino acid N-linked glycosylation;GO:0005797|Golgi medial cisterna | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA249:rna-TAV2_LOCUS19426,rna-TAV2_LOCUS19427,rna-TAV2_LOCUS19050,rna-TAV2_LOCUS19053 | AT5G60610||AT2G26860 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA251:rna-TAV2_LOCUS19892,rna-TAV2_LOCUS19890,rna-TAV2_LOCUS18442,rna-TAV2_LOCUS19413 | AT4G12370 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA252:rna-TAV2_LOCUS20123,rna-TAV2_LOCUS20124,rna-TAV2_LOCUS20125,rna-TAV2_LOCUS20116 | AT5G22670||AT5G22730||AT5G22610 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA257:rna-TAV2_LOCUS21544,rna-TAV2_LOCUS21543,rna-TAV2_LOCUS21546,rna-TAV2_LOCUS21545 | AT5G39580||AT5G64120 | peroxidase, putative | GO:0045730|respiratory burst;GO:0016020|membrane;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0005618|cell wall;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0050832|defense response to fungus;GO:0006499|N-terminal protein myristoylation;GO:0009055|electron carrier activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA258:rna-TAV2_LOCUS21581,rna-TAV2_LOCUS18715,rna-TAV2_LOCUS18714,rna-TAV2_LOCUS18713 | AT5G22950||AT5G22791 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box associated type 3 (InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G43550.1); Has 273 Blast hits to 269 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||VPS24.1; VPS24.1 | GO:0003674|molecular_function;GO:0016192|vesicle-mediated transport;GO:0000815|ESCRT III complex;GO:0005575|cellular_component;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA259:rna-TAV2_LOCUS21753,rna-TAV2_LOCUS21754,rna-TAV2_LOCUS21751,rna-TAV2_LOCUS21752 | AT5G18750||AT5G18730||AT5G15660 | F-box family protein||DNAJ heat shock N-terminal domain-containing protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18740.1); Has 299 Blast hits to 137 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 299; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0051082|unfolded protein binding;GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0031072|heat shock protein binding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA261:rna-TAV2_LOCUS22107,rna-TAV2_LOCUS18610,rna-TAV2_LOCUS18612,rna-TAV2_LOCUS18613 | AT4G02420 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA264:rna-TAV2_LOCUS22588,rna-TAV2_LOCUS22589,rna-TAV2_LOCUS22590,rna-TAV2_LOCUS22591 | AT4G24000||AT4G23990 | ATCSLG2, CSLG2; ATCSLG2; cellulose synthase/ transferase/ transferase, transferring glycosyl groups||ATCSLG3, CSLG3; ATCSLG3; cellulose synthase/ transferase/ transferase, transferring glycosyl groups | GO:0030244|cellulose biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0000271|polysaccharide biosynthetic process;GO:0016759|cellulose synthase activity;GO:0016740|transferase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA265:rna-TAV2_LOCUS23031,rna-TAV2_LOCUS23022,rna-TAV2_LOCUS23023,rna-TAV2_LOCUS25347 | AT4G34810||AT4G34800||AT4G34790||AT4G34770 | auxin-responsive family protein | GO:0003674|molecular_function;GO:0009733|response to auxin stimulus;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0009507|chloroplast | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA266:rna-TAV2_LOCUS23054,rna-TAV2_LOCUS23059,rna-TAV2_LOCUS23060,rna-TAV2_LOCUS24395 | AT4G15396||AT4G15310 | CYP702A3; CYP702A3; electron carrier/ heme binding / iron ion binding / monooxygenase||CYP702A6; CYP702A6; electron carrier/ heme binding / iron ion binding / monooxygenase | GO:0016020|membrane;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0009055|electron carrier activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA267:rna-TAV2_LOCUS23316,rna-TAV2_LOCUS23317,rna-TAV2_LOCUS23876,rna-TAV2_LOCUS23313 | AT5G44850||AT5G56430 | F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G05080.1); Has 469 Blast hits to 454 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 80; Fungi - 0; Plants - 386; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA268:rna-TAV2_LOCUS23328,rna-TAV2_LOCUS23330,rna-TAV2_LOCUS23910,rna-TAV2_LOCUS23476 | AT5G15690 | INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: MED21 (MEDIATOR 21) (TAIR:AT4G04780.2); Has 53 Blast hits to 53 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0046686|response to cadmium ion | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA269:rna-TAV2_LOCUS23402,rna-TAV2_LOCUS26045,rna-TAV2_LOCUS23704,rna-TAV2_LOCUS22854 | AT5G35330 | MBD02, MBD2, ATMBD2; MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase | GO:0005634|nucleus;GO:0008150|biological_process;GO:0003677|DNA binding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA270:rna-TAV2_LOCUS23507,rna-TAV2_LOCUS23508,rna-TAV2_LOCUS23510,rna-TAV2_LOCUS25868 | AT4G25680||AT5G52530 | unknown protein||dentin sialophosphoprotein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA273:rna-TAV2_LOCUS24406,rna-TAV2_LOCUS23942,rna-TAV2_LOCUS23943,rna-TAV2_LOCUS23570 | AT5G39300||AT5G39270||AT5G39310 | ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA 1.15; ATEXPA22 (ARABIDOPSIS THALIANA EXPANSIN A22)||ATEXPA25, EXP25, ATEXP25, ATHEXP ALPHA 1.18; ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25)||ATEXPA24, EXP24, ATEXP24, ATHEXP ALPHA 1.19; ATEXPA24 (ARABIDOPSIS THALIANA EXPANSIN A24) | GO:0005576|extracellular region;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0009828|plant-type cell wall loosening;GO:0009826|unidimensional cell growth | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA275:rna-TAV2_LOCUS24671,rna-TAV2_LOCUS24677,rna-TAV2_LOCUS24679,rna-TAV2_LOCUS25088 | AT5G37810||AT5G37820 | NIP4;1, NLM4; NIP4;1 (NOD26-LIKE INTRINSIC PROTEIN 4;1); water channel||NIP4;2, NLM5; NIP4;2 (NOD26-LIKE INTRINSIC PROTEIN 4;2); water channel | GO:0015250|water channel activity;GO:0016021|integral to membrane;GO:0006810|transport;GO:0016020|membrane | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA276:rna-TAV2_LOCUS24683,rna-TAV2_LOCUS24684,rna-TAV2_LOCUS24685,rna-TAV2_LOCUS24734 | AT1G10190||AT4G15050 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA277:rna-TAV2_LOCUS25285,rna-TAV2_LOCUS22672,rna-TAV2_LOCUS25544,rna-TAV2_LOCUS25545 | AT4G27160||AT4G27150 | AT2S3; AT2S3; lipid binding / nutrient reservoir||2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 | GO:0008289|lipid binding;GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0045735|nutrient reservoir activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA280:rna-TAV2_LOCUS4716,rna-TAV2_LOCUS4713,rna-TAV2_LOCUS4712,rna-TAV2_LOCUS4711 | AT4G38660||AT1G20030 | pathogenesis-related thaumatin family protein||thaumatin, putative | GO:0051707|response to other organism;GO:0031225|anchored to membrane;GO:0003674|molecular_function | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA282:rna-TAV2_LOCUS4875,rna-TAV2_LOCUS4874,rna-TAV2_LOCUS4873,rna-TAV2_LOCUS4872 | AT2G31180||AT4G28110||AT3G02940 | AtMYB41; AtMYB41 (myb domain protein 41); DNA binding / transcription factor||ATMYB14, MYB14AT, MYB14; MYB14 (MYB DOMAIN PROTEIN 14); DNA binding / transcription factor||MYB107, AtMYB107; MYB107 (myb domain protein 107); DNA binding / transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0009737|response to abscisic acid stimulus;GO:0009723|response to ethylene stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0016481|negative regulation of transcription;GO:0016049|cell growth;GO:0010200|response to chitin;GO:0009753|response to jasmonic acid stimulus;GO:0009651|response to salt stress;GO:0042335|cuticle development;GO:0003677|DNA binding | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA283:rna-TAV2_LOCUS4180,rna-TAV2_LOCUS4179,rna-TAV2_LOCUS4183,rna-TAV2_LOCUS4182 | AT1G11350||AT1G11330||AT1G61420 | S-locus lectin protein kinase family protein||CBRLK1, SD1-13, RKS2; SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase | GO:0016301|kinase activity;GO:0005529|sugar binding;GO:0046777|protein amino acid autophosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA284:rna-TAV2_LOCUS8392,rna-TAV2_LOCUS8391,rna-TAV2_LOCUS8389,rna-TAV2_LOCUS8390 | AT5G23400||AT2G34930 | disease resistance family protein||disease resistance family protein / LRR family protein | GO:0005515|protein binding;GO:0007165|signal transduction;GO:0005618|cell wall;GO:0050832|defense response to fungus;GO:0006952|defense response | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA285:rna-TAV2_LOCUS8440,rna-TAV2_LOCUS8441,rna-TAV2_LOCUS8443,rna-TAV2_LOCUS8446 | AT2G29260||AT2G29150 | tropinone reductase, putative / tropine dehydrogenase, putative | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0009507|chloroplast | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA286:rna-TAV2_LOCUS8477,rna-TAV2_LOCUS8474,rna-TAV2_LOCUS8476,rna-TAV2_LOCUS8475 | AT5G23960 | ATTPS21, TPS21; TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | GO:0051762|sesquiterpene biosynthetic process;GO:0016106|sesquiterpenoid biosynthetic process;GO:0005575|cellular_component | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA287:rna-TAV2_LOCUS8636,rna-TAV2_LOCUS8638,rna-TAV2_LOCUS8637,rna-TAV2_LOCUS8635 | - | - | - | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA288:rna-TAV2_LOCUS12200,rna-TAV2_LOCUS12199,rna-TAV2_LOCUS12201,rna-TAV2_LOCUS12202 | - | - | - | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA289:rna-TAV2_LOCUS15136,rna-TAV2_LOCUS15135,rna-TAV2_LOCUS15134,rna-TAV2_LOCUS15139 | AT5G48100||AT5G03260||AT5G09360 | LAC14; LAC14 (laccase 14); laccase||TT10, LAC15, ATLAC15; TT10 (TRANSPARENT TESTA 10); copper ion binding / laccase||LAC11; LAC11 (laccase 11); laccase | GO:0005507|copper ion binding;GO:0055114|oxidation reduction;GO:0009813|flavonoid biosynthetic process;GO:0009809|lignin biosynthetic process;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0046688|response to copper ion;GO:0046274|lignin catabolic process;GO:0008471|laccase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA290:rna-TAV2_LOCUS22427,rna-TAV2_LOCUS22426,rna-TAV2_LOCUS22429,rna-TAV2_LOCUS22424 | AT4G34135||AT2G15490 | UGT73B4; UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4); UDP-glucosyltransferase/ UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT73B2; UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2); UDP-glucosyltransferase/ UDP-glycosyltransferase/ flavonol 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase | GO:0051555|flavonol biosynthetic process;GO:0047893|flavonol 3-O-glucosyltransferase activity;GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0012505|endomembrane system;GO:0051707|response to other organism | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA292:rna-TAV2_LOCUS26302,rna-TAV2_LOCUS26301,rna-TAV2_LOCUS26304,rna-TAV2_LOCUS26303 | AT3G07840||AT3G07820 | polygalacturonase, putative / pectinase, putative||polygalacturonase 3 (PGA3) / pectinase | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA296:rna-TAV2_LOCUS1132,rna-TAV2_LOCUS1131,rna-TAV2_LOCUS1130 | AT1G20370||AT1G20680 | unknown protein||tRNA pseudouridine synthase family protein | GO:0003674|molecular_function;GO:0008033|tRNA processing;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0001522|pseudouridine synthesis;GO:0009982|pseudouridine synthase activity | rna-TAV2_LOCUS19119 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA297:rna-TAV2_LOCUS1146,rna-TAV2_LOCUS2947,rna-TAV2_LOCUS2951 | AT1G01790||AT4G00630 | KEA1, ATKEA1; KEA1 (K EFFLUX ANTIPORTER 1); potassium ion transmembrane transporter/ potassium:hydrogen antiporter||KEA2, ATKEA2; KEA2; potassium ion transmembrane transporter/ potassium:hydrogen antiporter | GO:0016020|membrane;GO:0015386|potassium:hydrogen antiporter activity;GO:0009941|chloroplast envelope;GO:0008152|metabolic process;GO:0006812|cation transport;GO:0006813|potassium ion transport;GO:0009507|chloroplast;GO:0015079|potassium ion transmembrane transporter activity | rna-TAV2_LOCUS4330 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA299:rna-TAV2_LOCUS1212,rna-TAV2_LOCUS2769,rna-TAV2_LOCUS2770 | AT4G01160 | BTB/POZ domain-containing protein | GO:0005575|cellular_component;GO:0005515|protein binding | rna-TAV2_LOCUS21532 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA301:rna-TAV2_LOCUS1327,rna-TAV2_LOCUS1326,rna-TAV2_LOCUS271 | AT1G44318||AT1G69740 | HEMB1; HEMB1; catalytic/ metal ion binding / porphobilinogen synthase||hemb2; hemb2; catalytic/ metal ion binding / porphobilinogen synthase | GO:0004655|porphobilinogen synthase activity;GO:0003824|catalytic activity;GO:0006779|porphyrin biosynthetic process;GO:0009570|chloroplast stroma;GO:0046872|metal ion binding;GO:0009507|chloroplast | rna-TAV2_LOCUS15903 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA302:rna-TAV2_LOCUS1398,rna-TAV2_LOCUS1401,rna-TAV2_LOCUS1400 | AT1G05260||AT1G05240||AT3G21770 | peroxidase 30 (PER30) (P30) (PRXR9)||RCI3, RCI3A; RCI3 (RARE COLD INDUCIBLE GENE 3); peroxidase||peroxidase, putative | GO:0016757|transferase activity, transferring glycosyl groups;GO:0042538|hyperosmotic salinity response;GO:0009269|response to desiccation;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0009409|response to cold;GO:0004601|peroxidase activity;GO:0006979|response to oxidative stress;GO:0020037|heme binding;GO:0005737|cytoplasm;GO:0005783|endoplasmic reticulum;GO:0005634|nucleus;GO:0009055|electron carrier activity | rna-TAV2_LOCUS11612 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA306:rna-TAV2_LOCUS1593,rna-TAV2_LOCUS1197,rna-TAV2_LOCUS1196 | AT1G04380||AT1G04350 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0010302|2-oxoglutarate-dependent dioxygenase activity;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS21936 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA315:rna-TAV2_LOCUS2402,rna-TAV2_LOCUS2406,rna-TAV2_LOCUS2519 | AT1G33120||AT4G10450 | 60S ribosomal protein L9 (RPL90B)||60S ribosomal protein L9 (RPL90D) | GO:0005773|vacuole;GO:0006412|translation;GO:0016020|membrane;GO:0015934|large ribosomal subunit;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0022625|cytosolic large ribosomal subunit | rna-TAV2_LOCUS20687 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA317:rna-TAV2_LOCUS2766,rna-TAV2_LOCUS2767,rna-TAV2_LOCUS2772 | AT1G31670||AT1G31690||AT1G31710 | copper amine oxidase, putative||amine oxidase/ copper ion binding / quinone binding | GO:0048038|quinone binding;GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0008131|amine oxidase activity | rna-TAV2_LOCUS18278 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA320:rna-TAV2_LOCUS2922,rna-TAV2_LOCUS2923,rna-TAV2_LOCUS2920 | AT1G14110||AT1G14080 | FUT6, ATFUT6; FUT6 (FUCOSYLTRANSFERASE 6); fucosyltransferase/ transferase, transferring glycosyl groups||FUT9, ATFUT9; FUT9 (FUCOSYLTRANSFERASE 9); fucosyltransferase | GO:0012505|endomembrane system;GO:0042546|cell wall biogenesis;GO:0008417|fucosyltransferase activity;GO:0016020|membrane | rna-TAV2_LOCUS8850 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA321:rna-TAV2_LOCUS2992,rna-TAV2_LOCUS2993,rna-TAV2_LOCUS1469 | AT1G09935||AT1G09932 | phosphoglycerate/bisphosphoglycerate mutase-related||phosphoglycerate/bisphosphoglycerate mutase family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS389 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA326:rna-TAV2_LOCUS3475,rna-TAV2_LOCUS3476,rna-TAV2_LOCUS3477 | AT1G34040||AT1G34060 | alliinase family protein | GO:0016846|carbon-sulfur lyase activity;GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0012505|endomembrane system;GO:0008150|biological_process | rna-TAV2_LOCUS6088 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA330:rna-TAV2_LOCUS3912,rna-TAV2_LOCUS3910,rna-TAV2_LOCUS3906 | AT1G33360||AT5G53350 | CLPX; CLPX; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding||ATP-dependent Clp protease ATP-binding subunit ClpX, putative | GO:0017111|nucleoside-triphosphatase activity;GO:0005515|protein binding;GO:0005759|mitochondrial matrix;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0015031|protein transport;GO:0000166|nucleotide binding;GO:0005739|mitochondrion | rna-TAV2_LOCUS18829 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA343:rna-TAV2_LOCUS5026,rna-TAV2_LOCUS5031,rna-TAV2_LOCUS5033 | AT5G25120||AT5G25150||AT5G25180||AT5G25130 | CYP71B14; CYP71B14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||TAF5; TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator||CYP71B12; CYP71B12; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71B11; CYP71B11; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0030528|transcription regulator activity;GO:0045449|regulation of transcription;GO:0005886|plasma membrane;GO:0004497|monooxygenase activity;GO:0005575|cellular_component;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0008150|biological_process;GO:0005634|nucleus;GO:0009055|electron carrier activity | rna-TAV2_LOCUS8036 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA345:rna-TAV2_LOCUS5069,rna-TAV2_LOCUS5071,rna-TAV2_LOCUS7065 | AT2G03770||AT2G03760||AT2G03750 | ST, ATST1, RAR047, ST1; ST; brassinosteroid sulfotransferase/ sulfotransferase||sulfotransferase family protein | GO:0008146|sulfotransferase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006952|defense response;GO:0016131|brassinosteroid metabolic process | rna-TAV2_LOCUS5072 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA346:rna-TAV2_LOCUS5087,rna-TAV2_LOCUS6343,rna-TAV2_LOCUS6344 | AT5G24140||AT5G24150||AT5G24155 | SQP2; SQP2; FAD binding / oxidoreductase/ squalene monooxygenase||squalene monooxygenase, putative / squalene epoxidase, putative||SQP1, SQE5; SQP1; squalene monooxygenase | GO:0016491|oxidoreductase activity;GO:0004506|squalene monooxygenase activity;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0050660|FAD binding;GO:0016126|sterol biosynthetic process | rna-TAV2_LOCUS5086 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA349:rna-TAV2_LOCUS5539,rna-TAV2_LOCUS5534,rna-TAV2_LOCUS6689 | AT1G63770 | peptidase M1 family protein | GO:0005773|vacuole;GO:0046686|response to cadmium ion;GO:0009941|chloroplast envelope;GO:0008270|zinc ion binding;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0009570|chloroplast stroma;GO:0009507|chloroplast;GO:0006508|proteolysis | rna-TAV2_LOCUS23816 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA362:rna-TAV2_LOCUS6701,rna-TAV2_LOCUS6706,rna-TAV2_LOCUS5542 | AT3G25780||AT3G25740||AT1G13260 | RAV1; RAV1; DNA binding / transcription factor/ transcription repressor||MAP1B, MAP1C; MAP1B (METHIONINE AMINOPEPTIDASE 1C); aminopeptidase/ metalloexopeptidase||AOC3; AOC3 (ALLENE OXIDE CYCLASE 3); allene-oxide cyclase | GO:0009741|response to brassinosteroid stimulus;GO:0006508|proteolysis;GO:0046423|allene-oxide cyclase activity;GO:0016020|membrane;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009507|chloroplast;GO:0048366|leaf development;GO:0005886|plasma membrane;GO:0016564|transcription repressor activity;GO:0009910|negative regulation of flower development;GO:0031365|N-terminal protein amino acid modification;GO:0048527|lateral root development;GO:0009620|response to fungus;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0009695|jasmonic acid biosynthetic process;GO:0003677|DNA binding | rna-TAV2_LOCUS2141 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA365:rna-TAV2_LOCUS6783,rna-TAV2_LOCUS6786,rna-TAV2_LOCUS6785 | AT5G64120||AT5G64110||AT5G64100||AT5G39580 | peroxidase, putative | GO:0016020|membrane;GO:0048046|apoplast;GO:0005618|cell wall;GO:0006979|response to oxidative stress;GO:0004601|peroxidase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0045730|respiratory burst;GO:0006499|N-terminal protein myristoylation;GO:0009055|electron carrier activity;GO:0050832|defense response to fungus | rna-TAV2_LOCUS24171 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA367:rna-TAV2_LOCUS7168,rna-TAV2_LOCUS7170,rna-TAV2_LOCUS7172 | AT5G46530||AT4G08450||AT5G46270||AT1G30330 | disease resistance protein (TIR-NBS-LRR class), putative||ARF6; ARF6 (AUXIN RESPONSE FACTOR 6); transcription factor||ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0005515|protein binding;GO:0009733|response to auxin stimulus;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0045087|innate immune response;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0004888|transmembrane receptor activity;GO:0016020|membrane;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0006952|defense response;GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0009908|flower development;GO:0005524|ATP binding;GO:0006915|apoptosis | rna-TAV2_LOCUS25532 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA368:rna-TAV2_LOCUS7201,rna-TAV2_LOCUS7203,rna-TAV2_LOCUS7197 | AT3G28360||AT3G28415||AT3G28345 | P-glycoprotein, putative||PGP16; PGP16 (P-GLYCOPROTEIN 16); ATPase, coupled to transmembrane movement of substances||ABC transporter family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0016020|membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0006810|transport;GO:0000166|nucleotide binding | rna-TAV2_LOCUS7200 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA377:rna-TAV2_LOCUS7623,rna-TAV2_LOCUS7616,rna-TAV2_LOCUS7617 | AT3G26780||AT3G26760||AT1G12850 | short-chain dehydrogenase/reductase (SDR) family protein||phosphoglycerate/bisphosphoglycerate mutase family protein||catalytic | GO:0016491|oxidoreductase activity;GO:0005829|cytosol;GO:0003824|catalytic activity;GO:0008270|zinc ion binding;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0005739|mitochondrion | rna-TAV2_LOCUS4098 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA384:rna-TAV2_LOCUS10430,rna-TAV2_LOCUS10429,rna-TAV2_LOCUS10428 | AT3G09260 | PYK10, PSR3.1, BGLU23; PYK10; beta-glucosidase/ copper ion binding / fucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0005773|vacuole;GO:0005507|copper ion binding;GO:0005777|peroxisome;GO:0016020|membrane;GO:0008422|beta-glucosidase activity;GO:0015928|fucosidase activity;GO:0009610|response to symbiotic fungus;GO:0006970|response to osmotic stress;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0010168|ER body | rna-TAV2_LOCUS228 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA385:rna-TAV2_LOCUS10764,rna-TAV2_LOCUS11796,rna-TAV2_LOCUS11795 | AT3G05165||AT3G05155||AT3G05400 | sugar transporter, putative | GO:0016020|membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0006810|transport;GO:0055085|transmembrane transport;GO:0005351|sugar:hydrogen symporter activity | rna-TAV2_LOCUS11424 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA387:rna-TAV2_LOCUS10854,rna-TAV2_LOCUS10853,rna-TAV2_LOCUS10851 | AT2G06210 | ELF8, VIP6; ELF8 (EARLY FLOWERING 8); binding | GO:0005488|binding;GO:0016020|membrane;GO:0045893|positive regulation of transcription, DNA-dependent;GO:0009910|negative regulation of flower development;GO:0016571|histone methylation | rna-TAV2_LOCUS10852 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA388:rna-TAV2_LOCUS10890,rna-TAV2_LOCUS10891,rna-TAV2_LOCUS10892 | AT3G55290||AT3G46170 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0005777|peroxisome;GO:0046686|response to cadmium ion;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS18089 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA391:rna-TAV2_LOCUS11520,rna-TAV2_LOCUS9241,rna-TAV2_LOCUS8770 | ATCG00770 | RPS8; chloroplast 30S ribosomal protein S8 | GO:0009507|chloroplast;GO:0016020|membrane | rna-TAV2_LOCUS24115 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA394:rna-TAV2_LOCUS11635,rna-TAV2_LOCUS11636,rna-TAV2_LOCUS11637 | AT3G24550||AT3G24540 | ATPERK1; ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0009620|response to fungus;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0009611|response to wounding | rna-TAV2_LOCUS10420 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA395:rna-TAV2_LOCUS11694,rna-TAV2_LOCUS11703,rna-TAV2_LOCUS11702 | AT3G13445||AT3G13440||AT1G55520 | methyltransferase/ nucleic acid binding||TBP2, ATTBP2; TBP2 (TATA BINDING PROTEIN 2); DNA binding / RNA polymerase II transcription factor/ TATA-binding protein binding||TBP1, TFIID-1; TBP1 (TATA BINDING PROTEIN 1); DNA binding / RNA polymerase II transcription factor/ binding | GO:0015946|methanol oxidation;GO:0005488|binding;GO:0006352|transcription initiation;GO:0003676|nucleic acid binding;GO:0019415|acetate biosynthetic process from carbon monoxide;GO:0006355|regulation of transcription, DNA-dependent;GO:0003702|RNA polymerase II transcription factor activity;GO:0017025|TATA-binding protein binding;GO:0005669|transcription factor TFIID complex;GO:0008168|methyltransferase activity;GO:0032259|methylation;GO:0005575|cellular_component;GO:0006367|transcription initiation from RNA polymerase II promoter;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS3348 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA397:rna-TAV2_LOCUS11748,rna-TAV2_LOCUS11749,rna-TAV2_LOCUS10581 | AT3G07840||AT3G07820||AT5G48150 | PAT1; PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor||polygalacturonase, putative / pectinase, putative||polygalacturonase 3 (PGA3) / pectinase | GO:0009640|photomorphogenesis;GO:0003700|transcription factor activity;GO:0005737|cytoplasm;GO:0004871|signal transducer activity;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | rna-TAV2_LOCUS7475 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA401:rna-TAV2_LOCUS8864,rna-TAV2_LOCUS8863,rna-TAV2_LOCUS8870 | AT3G05790||AT3G05780 | LON3; LON3 (LON PROTEASE 3); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase||LON4; LON4 (LON PROTEASE 4); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase | GO:0017111|nucleoside-triphosphatase activity;GO:0008236|serine-type peptidase activity;GO:0005524|ATP binding;GO:0004252|serine-type endopeptidase activity;GO:0000166|nucleotide binding;GO:0009507|chloroplast;GO:0006508|proteolysis;GO:0005739|mitochondrion | rna-TAV2_LOCUS13778 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA404:rna-TAV2_LOCUS9011,rna-TAV2_LOCUS9013,rna-TAV2_LOCUS9012 | AT2G16430||AT2G27190 | PAP10, ATPAP10; PAP10 (PURPLE ACID PHOSPHATASE 10); acid phosphatase/ protein serine/threonine phosphatase||PAP1, ATPAP1, PAP12, ATPAP12; PAP12 (PURPLE ACID PHOSPHATASE 12); acid phosphatase/ protein serine/threonine phosphatase | GO:0004722|protein serine/threonine phosphatase activity;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0003993|acid phosphatase activity;GO:0008150|biological_process | rna-TAV2_LOCUS5460 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA425:rna-TAV2_LOCUS13216,rna-TAV2_LOCUS14948,rna-TAV2_LOCUS14949 | AT2G12480||AT2G24010||AT2G24000||AT1G72275 | ||SCPL43; serine carboxypeptidase S10 family protein||scpl23; scpl23 (serine carboxypeptidase-like 23); serine-type carboxypeptidase||scpl22; scpl22 (serine carboxypeptidase-like 22); serine-type carboxypeptidase | ;GO:0012505|endomembrane system;GO:0006508|proteolysis | rna-TAV2_LOCUS19455 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA431:rna-TAV2_LOCUS13540,rna-TAV2_LOCUS13834,rna-TAV2_LOCUS13836 | AT2G23540||AT3G50400 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | rna-TAV2_LOCUS17239 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA434:rna-TAV2_LOCUS13931,rna-TAV2_LOCUS13932,rna-TAV2_LOCUS13875 | AT2G40450||AT1G01640 | speckle-type POZ protein-related | GO:0009908|flower development;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | rna-TAV2_LOCUS13359 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA441:rna-TAV2_LOCUS14365,rna-TAV2_LOCUS14370,rna-TAV2_LOCUS14367 | AT2G21410||AT4G39080 | VHA-A2; VHA-A2 (VACUOLAR PROTON ATPASE A2); ATPase||VHA-A3; VHA-A3 (VACUOLAR PROTON ATPASE A3); ATPase | GO:0005773|vacuole;GO:0009678|hydrogen-translocating pyrophosphatase activity;GO:0016020|membrane;GO:0005774|vacuolar membrane;GO:0016887|ATPase activity;GO:0009705|plant-type vacuole membrane;GO:0005886|plasma membrane;GO:0031669|cellular response to nutrient levels;GO:0000325|plant-type vacuole;GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0015986|ATP synthesis coupled proton transport | rna-TAV2_LOCUS24845 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA445:rna-TAV2_LOCUS14719,rna-TAV2_LOCUS14710,rna-TAV2_LOCUS14711 | AT2G30150||AT2G30140 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS3870 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA448:rna-TAV2_LOCUS15018,rna-TAV2_LOCUS15019,rna-TAV2_LOCUS15022 | AT1G07170||AT2G29930 | LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: PHF5-like (InterPro:IPR005345); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30000.1); Has 292 Blast hits to 292 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 75; Plants - 47; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).||F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS3541 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA462:rna-TAV2_LOCUS16734,rna-TAV2_LOCUS15550,rna-TAV2_LOCUS15542 | AT3G44930 | ATCHX10, CHX10; ATCHX10 (CATION/H+ EXCHANGER 10); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0015385|sodium:hydrogen antiporter activity;GO:0016021|integral to membrane;GO:0006812|cation transport;GO:0005451|monovalent cation:hydrogen antiporter activity | rna-TAV2_LOCUS15551 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA479:rna-TAV2_LOCUS17930,rna-TAV2_LOCUS15967,rna-TAV2_LOCUS15969 | AT5G26865||AT5G27130 | ||AGL39; AGL39 (AGAMOUS LIKE 39); DNA binding / transcription factor | ;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS17931 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA481:rna-TAV2_LOCUS18000,rna-TAV2_LOCUS18005,rna-TAV2_LOCUS18003 | AT1G78950||AT1G78955||AT1G78960 | beta-amyrin synthase, putative||CAMS1; CAMS1 (Camelliol C synthase 1); beta-amyrin synthase||ATLUP2; ATLUP2; beta-amyrin synthase/ lupeol synthase | GO:0042299|lupeol synthase activity;GO:0016104|triterpenoid biosynthetic process;GO:0042300|beta-amyrin synthase activity;GO:0019745|pentacyclic triterpenoid biosynthetic process;GO:0005575|cellular_component | rna-TAV2_LOCUS2981 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA482:rna-TAV2_LOCUS18029,rna-TAV2_LOCUS18031,rna-TAV2_LOCUS18024 | AT2G32540||AT2G32530 | ATCSLB04, CSLB04, ATCSLB4; ATCSLB04; cellulose synthase/ transferase/ transferase, transferring glycosyl groups||ATCSLB03, CSLB03, ATCSLB3; ATCSLB03; cellulose synthase/ transferase/ transferase, transferring glycosyl groups | GO:0030244|cellulose biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0000271|polysaccharide biosynthetic process;GO:0016759|cellulose synthase activity;GO:0016740|transferase activity | rna-TAV2_LOCUS13589 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA494:rna-TAV2_LOCUS19386,rna-TAV2_LOCUS19385,rna-TAV2_LOCUS20881 | AT5G20490||AT1G08730 | XIC, ATXIC; XIC; motor/ protein binding||XIK, ATXIK, XI-17; XIK; motor/ protein binding | GO:0010091|trichome branching;GO:0005515|protein binding;GO:0048768|root hair cell tip growth;GO:0051646|mitochondrion localization;GO:0003774|motor activity;GO:0016049|cell growth;GO:0012505|endomembrane system;GO:0016459|myosin complex;GO:0009791|post-embryonic development;GO:0030048|actin filament-based movement;GO:0051301|cell division;GO:0010090|trichome morphogenesis;GO:0051645|Golgi localization;GO:0010154|fruit development;GO:0060151|peroxisome localization | rna-TAV2_LOCUS700 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA506:rna-TAV2_LOCUS20348,rna-TAV2_LOCUS18918,rna-TAV2_LOCUS18917 | AT5G07430||AT5G07420||AT1G69940||AT5G61680 | pectinesterase family protein||ATPPME1, PPME1; PPME1; pectinesterase | GO:0009860|pollen tube growth;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0005783|endoplasmic reticulum;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS6923 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA508:rna-TAV2_LOCUS20620,rna-TAV2_LOCUS18804,rna-TAV2_LOCUS18811 | AT5G13370||AT5G13320 | auxin-responsive GH3 family protein||PBS3, GDG1, WIN3, GH3.12; PBS3 (AVRPPHB SUSCEPTIBLE 3) | GO:0042742|defense response to bacterium;GO:0016046|detection of fungus;GO:0009863|salicylic acid mediated signaling pathway;GO:0009733|response to auxin stimulus;GO:0009816|defense response to bacterium, incompatible interaction;GO:0005575|cellular_component;GO:0018874|benzoate metabolic process;GO:0006952|defense response | rna-TAV2_LOCUS18803 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA520:rna-TAV2_LOCUS21797,rna-TAV2_LOCUS21798,rna-TAV2_LOCUS21799 | AT5G02180||AT5G02170||AT3G09330 | amino acid transporter family protein | GO:0006865|amino acid transport;GO:0009507|chloroplast;GO:0015171|amino acid transmembrane transporter activity;GO:0016020|membrane | rna-TAV2_LOCUS11594 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA523:rna-TAV2_LOCUS21966,rna-TAV2_LOCUS19982,rna-TAV2_LOCUS19981 | AT5G51810 | GA20OX2, AT2353, ATGA20OX2; GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase | GO:0009639|response to red or far red light;GO:0009739|response to gibberellin stimulus;GO:0009908|flower development;GO:0045544|gibberellin 20-oxidase activity;GO:0009826|unidimensional cell growth;GO:0009686|gibberellin biosynthetic process | rna-TAV2_LOCUS21784 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA530:rna-TAV2_LOCUS22194,rna-TAV2_LOCUS20741,rna-TAV2_LOCUS20740 | AT3G23955 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G25850.1). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS22195 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA539:rna-TAV2_LOCUS22981,rna-TAV2_LOCUS22980,rna-TAV2_LOCUS25512 | - | - | - | rna-TAV2_LOCUS10835 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA545:rna-TAV2_LOCUS23486,rna-TAV2_LOCUS23488,rna-TAV2_LOCUS24410 | AT4G14030||AT4G14040||AT3G23800 | EDA38, SBP2; SBP2 (SELENIUM-BINDING PROTEIN 2); selenium binding||SBP3; SBP3 (selenium-binding protein 3); selenium binding||SBP1; SBP1 (selenium-binding protein 1); selenium binding | GO:0042542|response to hydrogen peroxide;GO:0046686|response to cadmium ion;GO:0008430|selenium binding;GO:0000103|sulfate assimilation;GO:0010197|polar nucleus fusion;GO:0005575|cellular_component | rna-TAV2_LOCUS4944 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA551:rna-TAV2_LOCUS24025,rna-TAV2_LOCUS24024,rna-TAV2_LOCUS24020 | AT4G29700||AT4G29690||AT4G29680 | type I phosphodiesterase/nucleotide pyrophosphatase family protein | GO:0005773|vacuole;GO:0003824|catalytic activity;GO:0009117|nucleotide metabolic process;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0016787|hydrolase activity | rna-TAV2_LOCUS21803 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA552:rna-TAV2_LOCUS24084,rna-TAV2_LOCUS22843,rna-TAV2_LOCUS23213 | AT4G25930||AT4G25920||AT5G49940 | NFU2, ATCNFU2; NFU2 (NIFU-LIKE PROTEIN 2); structural molecule||unknown protein | GO:0003674|molecular_function;GO:0005198|structural molecule activity;GO:0016226|iron-sulfur cluster assembly;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009658|chloroplast organization;GO:0009507|chloroplast | rna-TAV2_LOCUS22143 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA555:rna-TAV2_LOCUS24372,rna-TAV2_LOCUS24378,rna-TAV2_LOCUS24380 | AT3G48880 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS7482 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA560:rna-TAV2_LOCUS24605,rna-TAV2_LOCUS24606,rna-TAV2_LOCUS25478 | AT4G28020||AT4G28025||AT4G27340 | Met-10+ like family protein||unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS24165 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA563:rna-TAV2_LOCUS24801,rna-TAV2_LOCUS24795,rna-TAV2_LOCUS24792 | AT5G16486||AT4G04650 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold; LOCATED IN: stromule; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43730.1); Has 608 Blast hits to 598 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 608; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04650.1); Has 335 Blast hits to 332 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 335; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0010319|stromule;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS23483 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA565:rna-TAV2_LOCUS24920,rna-TAV2_LOCUS24149,rna-TAV2_LOCUS25552 | AT4G34650||AT4G34640 | SQS2; SQS2 (SQUALENE SYNTHASE 2); farnesyl-diphosphate farnesyltransferase||SQS1, ERG9; SQS1 (SQUALENE SYNTHASE 1); farnesyl-diphosphate farnesyltransferase | GO:0004310|farnesyl-diphosphate farnesyltransferase activity;GO:0005886|plasma membrane;GO:0005789|endoplasmic reticulum membrane;GO:0016021|integral to membrane;GO:0005783|endoplasmic reticulum;GO:0016126|sterol biosynthetic process;GO:0006499|N-terminal protein myristoylation | rna-TAV2_LOCUS8991 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA571:rna-TAV2_LOCUS25219,rna-TAV2_LOCUS25114,rna-TAV2_LOCUS23512 | AT5G38430||AT1G67090 | ribulose bisphosphate carboxylase small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B)||RBCS1A; RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate carboxylase | GO:0005507|copper ion binding;GO:0010218|response to far red light;GO:0016020|membrane;GO:0016984|ribulose-bisphosphate carboxylase activity;GO:0009941|chloroplast envelope;GO:0015977|carbon fixation;GO:0048046|apoplast;GO:0009637|response to blue light;GO:0022626|cytosolic ribosome;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0010114|response to red light;GO:0009507|chloroplast;GO:0009573|chloroplast ribulose bisphosphate carboxylase complex;GO:0031977|thylakoid lumen | rna-TAV2_LOCUS17929 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA588:rna-TAV2_LOCUS4185,rna-TAV2_LOCUS4184,rna-TAV2_LOCUS4181 | AT1G11350 | CBRLK1, SD1-13, RKS2; SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase | GO:0016301|kinase activity;GO:0046777|protein amino acid autophosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0005886|plasma membrane;GO:0004672|protein kinase activity | rna-TAV2_LOCUS4470 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA601:rna-TAV2_LOCUS12146,rna-TAV2_LOCUS12144,rna-TAV2_LOCUS12149 | AT5G13100||AT5G13110 | G6PD2; G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2); glucose-6-phosphate dehydrogenase||unknown protein | GO:0009051|pentose-phosphate shunt, oxidative branch;GO:0004345|glucose-6-phosphate dehydrogenase activity;GO:0006006|glucose metabolic process;GO:0005575|cellular_component;GO:0009507|chloroplast | rna-TAV2_LOCUS22332 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA610:rna-TAV2_LOCUS4446,rna-TAV2_LOCUS4447,rna-TAV2_LOCUS4448 | AT1G07890||AT3G09640 | APX2, APX1B; APX2 (ASCORBATE PEROXIDASE 2); L-ascorbate peroxidase||APX1, CS1; APX1 (ascorbate peroxidase 1); L-ascorbate peroxidase | GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0016688|L-ascorbate peroxidase activity;GO:0009507|chloroplast;GO:0000302|response to reactive oxygen species;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0009408|response to heat;GO:0009570|chloroplast stroma;GO:0009793|embryonic development ending in seed dormancy;GO:0009651|response to salt stress;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS10468 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA614:rna-TAV2_LOCUS1022,rna-TAV2_LOCUS1496 | AT4G00550 | DGD2; DGD2; UDP-galactosyltransferase/ UDP-glycosyltransferase/ digalactosyldiacylglycerol synthase/ transferase, transferring glycosyl groups | GO:0046481|digalactosyldiacylglycerol synthase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016036|cellular response to phosphate starvation;GO:0008194|UDP-glycosyltransferase activity;GO:0035250|UDP-galactosyltransferase activity;GO:0019375|galactolipid biosynthetic process;GO:0009707|chloroplast outer membrane;GO:0009247|glycolipid biosynthetic process | rna-TAV2_LOCUS22212,rna-TAV2_LOCUS3625 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA628:rna-TAV2_LOCUS1373,rna-TAV2_LOCUS1372 | AT1G29660||AT1G29670||AT4G18970||AT5G45670 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0006629|lipid metabolic process;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS24476,rna-TAV2_LOCUS6971 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA641:rna-TAV2_LOCUS1680,rna-TAV2_LOCUS1681 | AT1G02190||AT1G02205 | CER1; CER1 (ECERIFERUM 1); octadecanal decarbonylase||CER1 protein, putative | GO:0016491|oxidoreductase activity;GO:0005506|iron ion binding;GO:0055114|oxidation reduction;GO:0012505|endomembrane system;GO:0006633|fatty acid biosynthetic process;GO:0005783|endoplasmic reticulum | rna-TAV2_LOCUS18770,rna-TAV2_LOCUS18773 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA672:rna-TAV2_LOCUS2422,rna-TAV2_LOCUS2417 | - | - | - | rna-TAV2_LOCUS7838,rna-TAV2_LOCUS20327 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA676:rna-TAV2_LOCUS2463,rna-TAV2_LOCUS2464 | AT1G09550||AT1G57590 | pectinacetylesterase, putative||carboxylesterase | GO:0012505|endomembrane system;GO:0004091|carboxylesterase activity;GO:0008150|biological_process | rna-TAV2_LOCUS9823,rna-TAV2_LOCUS7974 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA682:rna-TAV2_LOCUS2646,rna-TAV2_LOCUS2645 | AT3G29630||AT1G50580 | glycosyltransferase family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups | rna-TAV2_LOCUS1853,rna-TAV2_LOCUS1849 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA712:rna-TAV2_LOCUS3433,rna-TAV2_LOCUS3427 | AT1G29980||AT2G34510 | INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34510.1); Has 174 Blast hits to 163 proteins in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G29980.1); Has 177 Blast hits to 163 proteins in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0031225|anchored to membrane;GO:0008150|biological_process;GO:0003674|molecular_function | rna-TAV2_LOCUS13614,rna-TAV2_LOCUS3428 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA726:rna-TAV2_LOCUS3728,rna-TAV2_LOCUS3734 | AT1G04840||AT2G40920||AT5G62660 | F-box family protein||pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS3971,rna-TAV2_LOCUS3250 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA743:rna-TAV2_LOCUS63,rna-TAV2_LOCUS62 | AT1G28010||AT1G27940 | PGP13; PGP13 (P-GLYCOPROTEIN 13); ATPase, coupled to transmembrane movement of substances||PGP14; PGP14 (P-GLYCOPROTEIN 14); ATPase, coupled to transmembrane movement of substances | GO:0016021|integral to membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport | rna-TAV2_LOCUS1502,rna-TAV2_LOCUS23040 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA750:rna-TAV2_LOCUS847,rna-TAV2_LOCUS845 | AT1G25390 | protein kinase family protein | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | rna-TAV2_LOCUS8173,rna-TAV2_LOCUS8461 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA768:rna-TAV2_LOCUS5293,rna-TAV2_LOCUS7798 | AT5G26250||AT5G26340||AT3G05960 | ATSTP6, STP6; STP6 (SUGAR TRANSPORTER 6); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sugar:hydrogen symporter||sugar transporter, putative||MSS1, STP13; MSS1; carbohydrate transmembrane transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose symporter/ sugar:hydrogen symporter | GO:0009679|hexose:hydrogen symporter activity;GO:0016310|phosphorylation;GO:0016020|membrane;GO:0015145|monosaccharide transmembrane transporter activity;GO:0034219|carbohydrate transmembrane transport;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0006810|transport;GO:0005358|high-affinity hydrogen:glucose symporter activity;GO:0055085|transmembrane transport;GO:0005351|sugar:hydrogen symporter activity | rna-TAV2_LOCUS11269,rna-TAV2_LOCUS11941 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA822:rna-TAV2_LOCUS6579,rna-TAV2_LOCUS6580 | AT4G35725||AT3G03826 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS24965,rna-TAV2_LOCUS25234 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA965:rna-TAV2_LOCUS11134,rna-TAV2_LOCUS11141 | AT3G09380||AT3G09800||AT4G08520||AT1G60970 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: vacuolar sorting signal binding (TAIR:AT1G68310.2); Has 408 Blast hits to 408 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 85; Plants - 40; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).||clathrin adaptor complex small chain family protein||protein binding | GO:0003674|molecular_function;GO:0005515|protein binding;GO:0016192|vesicle-mediated transport;GO:0006886|intracellular protein transport;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006810|transport;GO:0008150|biological_process;GO:0030117|membrane coat;GO:0030125|clathrin vesicle coat | rna-TAV2_LOCUS20623,rna-TAV2_LOCUS6731 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA971:rna-TAV2_LOCUS11222,rna-TAV2_LOCUS10069 | AT3G23990||AT2G33210||AT3G13860 | HSP60-3A; HSP60-3A (HEAT SHOCK PROTEIN 60-3A); ATP binding / protein binding||HSP60-2; HSP60-2 (HEAT SHOCK PROTEIN 60-2); ATP binding||HSP60, HSP60-3B; HSP60 (HEAT SHOCK PROTEIN 60); ATP binding | GO:0005507|copper ion binding;GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0005515|protein binding;GO:0005759|mitochondrial matrix;GO:0007005|mitochondrion organization;GO:0006954|inflammatory response;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009408|response to heat;GO:0051131|chaperone-mediated protein complex assembly;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS12419,rna-TAV2_LOCUS10153 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA979:rna-TAV2_LOCUS11406,rna-TAV2_LOCUS11407 | AT3G07470 | unknown protein | GO:0005773|vacuole;GO:0008150|biological_process | rna-TAV2_LOCUS5112,rna-TAV2_LOCUS8108 | 4 | 1 | Thlaspi arvense | Tarvense | |||
| TA1029:rna-TAV2_LOCUS9303,rna-TAV2_LOCUS9304;TA1700:rna-TAV2_LOCUS8597,rna-TAV2_LOCUS8595 | AT3G08640||AT3G08630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: alphavirus core protein family (TAIR:AT3G08640.1); Has 3471 Blast hits to 1913 proteins in 226 species: Archae - 0; Bacteria - 450; Metazoa - 1700; Fungi - 130; Plants - 787; Viruses - 19; Other Eukaryotes - 385 (source: NCBI BLink).||alphavirus core protein family | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0009941|chloroplast envelope;GO:0008150|biological_process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1074:rna-TAV2_LOCUS12648,rna-TAV2_LOCUS12649;TA1244:rna-TAV2_LOCUS16803,rna-TAV2_LOCUS16802 | AT1G72290 | trypsin and protease inhibitor family protein / Kunitz family protein | GO:0012505|endomembrane system;GO:0004866|endopeptidase inhibitor activity;GO:0008150|biological_process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1108:rna-TAV2_LOCUS13643,rna-TAV2_LOCUS13309;TA1529:rna-TAV2_LOCUS23454,rna-TAV2_LOCUS23452 | AT2G21540||AT2G21520||AT4G39170||AT4G39180 | SEC14, ATSEC14; SEC14; phosphatidylinositol transporter||SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative||ATSFH3, SFH3; SFH3 (SEC14-LIKE 3); phosphatidylinositol transporter||transporter | GO:0005622|intracellular;GO:0005886|plasma membrane;GO:0006656|phosphatidylcholine biosynthetic process;GO:0005215|transporter activity;GO:0008526|phosphatidylinositol transporter activity;GO:0006810|transport | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1110:rna-TAV2_LOCUS13673,rna-TAV2_LOCUS13674;TA1257:rna-TAV2_LOCUS16997,rna-TAV2_LOCUS16998 | AT2G41810||AT2G41790||AT3G57470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41800.1); Has 161 Blast hits to 157 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||peptidase M16 family protein / insulinase family protein | GO:0003674|molecular_function;GO:0003824|catalytic activity;GO:0008270|zinc ion binding;GO:0012505|endomembrane system;GO:0046872|metal ion binding;GO:0008150|biological_process;GO:0005575|cellular_component;GO:0006508|proteolysis | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1129:rna-TAV2_LOCUS13938,rna-TAV2_LOCUS13940;TA1499:rna-TAV2_LOCUS22771,rna-TAV2_LOCUS24847 | AT2G21380||AT2G21300||AT4G38950||AT4G39050 | kinesin-related protein (MKRP2)||kinesin motor protein-related||kinesin motor family protein | GO:0003777|microtubule motor activity;GO:0005515|protein binding;GO:0005875|microtubule associated complex;GO:0007017|microtubule-based process;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0007018|microtubule-based movement;GO:0009507|chloroplast | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1160:rna-TAV2_LOCUS14579,rna-TAV2_LOCUS14580;TA1726:rna-TAV2_LOCUS12081,rna-TAV2_LOCUS12080 | AT2G36430 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1230:rna-TAV2_LOCUS16461,rna-TAV2_LOCUS16465;TA1521:rna-TAV2_LOCUS23278,rna-TAV2_LOCUS23281 | AT1G65790||AT4G21390||AT4G21380 | B120; B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding||ARK1; ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase||ARK3; ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase | GO:0005773|vacuole;GO:0005634|nucleus;GO:0016301|kinase activity;GO:0005529|sugar binding;GO:0046777|protein amino acid autophosphorylation;GO:0016020|membrane;GO:0019199|transmembrane receptor protein kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1429:rna-TAV2_LOCUS20530,rna-TAV2_LOCUS20531;TA1441:rna-TAV2_LOCUS20738,rna-TAV2_LOCUS20737 | AT2G31430 | invertase/pectin methylesterase inhibitor family protein | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA617:rna-TAV2_LOCUS1065,rna-TAV2_LOCUS309;TA1219:rna-TAV2_LOCUS16096,rna-TAV2_LOCUS16093 | AT1G23140||AT1G70790||AT1G70820 | C2 domain-containing protein||phosphoglucomutase, putative / glucose phosphomutase, putative | GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005975|carbohydrate metabolic process;GO:0016868|intramolecular transferase activity, phosphotransferases;GO:0009507|chloroplast | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA650:rna-TAV2_LOCUS1948,rna-TAV2_LOCUS3896;TA1188:rna-TAV2_LOCUS15420,rna-TAV2_LOCUS15419 | AT1G27130||AT1G69920||AT1G69930 | ATGSTU11; ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11); glutathione transferase||ATGSTU12; ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12); glutathione transferase||ATGSTU13, GST12; ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13); glutathione transferase | GO:0046686|response to cadmium ion;GO:0005737|cytoplasm;GO:0004364|glutathione transferase activity;GO:0009407|toxin catabolic process;GO:0006749|glutathione metabolic process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA698:rna-TAV2_LOCUS3129,rna-TAV2_LOCUS3134;TA825:rna-TAV2_LOCUS6635,rna-TAV2_LOCUS6634 | AT1G12630||AT1G12610||AT1G63030 | DNA binding / transcription activator/ transcription factor||DDF1; DDF1 (DWARF AND DELAYED FLOWERING 1); DNA binding / sequence-specific DNA binding / transcription factor||ddf2; ddf2 (DWARF AND DELAYED FLOWERING 2); DNA binding / transcription factor | GO:0043565|sequence-specific DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009651|response to salt stress;GO:0016049|cell growth;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0009686|gibberellin biosynthetic process;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA703:rna-TAV2_LOCUS3197,rna-TAV2_LOCUS3840;TA1290:rna-TAV2_LOCUS17745,rna-TAV2_LOCUS15661 | AT1G16390||AT1G16370||AT1G79360||AT1G79410 | AtOCT5; AtOCT5 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER5); carbohydrate transmembrane transporter/ sugar:hydrogen symporter||ATOCT6, OCT6; OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6); carbohydrate transmembrane transporter/ sugar:hydrogen symporter||ATOCT2; ATOCT2 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter||ATOCT3; ATOCT3 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 3); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0016020|membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0006810|transport;GO:0006811|ion transport;GO:0005351|sugar:hydrogen symporter activity | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA763:rna-TAV2_LOCUS5174,rna-TAV2_LOCUS6091;TA1624:rna-TAV2_LOCUS25628,rna-TAV2_LOCUS25630 | AT5G44820||AT4G19975||AT4G19970 | ||unknown protein | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA770:rna-TAV2_LOCUS5310,rna-TAV2_LOCUS5780;TA1288:rna-TAV2_LOCUS17695,rna-TAV2_LOCUS17694 | AT5G24400||AT5G24410||AT3G49360 | glucosamine/galactosamine-6-phosphate isomerase-related||emb2024; emb2024 (embryo defective 2024); 6-phosphogluconolactonase/ catalytic||glucosamine/galactosamine-6-phosphate isomerase family protein | GO:0006098|pentose-phosphate shunt;GO:0042742|defense response to bacterium;GO:0009051|pentose-phosphate shunt, oxidative branch;GO:0003824|catalytic activity;GO:0005777|peroxisome;GO:0009793|embryonic development ending in seed dormancy;GO:0005886|plasma membrane;GO:0017057|6-phosphogluconolactonase activity;GO:0009570|chloroplast stroma;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process;GO:0002229|defense response to oomycetes;GO:0009507|chloroplast | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA794:rna-TAV2_LOCUS5885,rna-TAV2_LOCUS5182;TA845:rna-TAV2_LOCUS6941,rna-TAV2_LOCUS6944 | AT3G30739 | - | - | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA800:rna-TAV2_LOCUS6045,rna-TAV2_LOCUS6040;TA1537:rna-TAV2_LOCUS23681,rna-TAV2_LOCUS23678 | AT4G19690||AT4G19680 | IRT1; IRT1 (iron-regulated transporter 1); cadmium ion transmembrane transporter/ copper uptake transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter||IRT2; IRT2; iron ion transmembrane transporter/ zinc ion transmembrane transporter | GO:0016020|membrane;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0005385|zinc ion transmembrane transporter activity;GO:0006829|zinc ion transport;GO:0006826|iron ion transport;GO:0005381|iron ion transmembrane transporter activity | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA833:rna-TAV2_LOCUS6758,rna-TAV2_LOCUS6755;TA1173:rna-TAV2_LOCUS14934,rna-TAV2_LOCUS14936 | AT4G23120 | bromo-adjacent homology (BAH) domain-containing protein | GO:0005575|cellular_component;GO:0003677|DNA binding | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA855:rna-TAV2_LOCUS7113,rna-TAV2_LOCUS7111;TA1629:rna-TAV2_LOCUS25721,rna-TAV2_LOCUS25722 | AT1G63450||AT5G41250 | catalytic||exostosin family protein | GO:0003824|catalytic activity;GO:0008150|biological_process;GO:0016020|membrane | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA858:rna-TAV2_LOCUS7141,rna-TAV2_LOCUS6662;TA1415:rna-TAV2_LOCUS20216,rna-TAV2_LOCUS20215 | AT5G62210||AT5G62200||AT5G07190 | ATS3; ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)||embryo-specific protein-related | GO:0003674|molecular_function;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0009793|embryonic development ending in seed dormancy;GO:0031225|anchored to membrane | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA915:rna-TAV2_LOCUS8163,rna-TAV2_LOCUS8132;TA1162:rna-TAV2_LOCUS14633,rna-TAV2_LOCUS14635 | AT5G65940||AT2G30660 | 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative||CHY1; CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase | GO:0003824|catalytic activity;GO:0003860|3-hydroxyisobutyryl-CoA hydrolase activity;GO:0009733|response to auxin stimulus;GO:0006574|valine catabolic process;GO:0006635|fatty acid beta-oxidation;GO:0009409|response to cold;GO:0008152|metabolic process | - | 4 | 2 | Thlaspi arvense | Tarvense | |||
| TA1002:rna-TAV2_LOCUS8779,rna-TAV2_LOCUS10400 | AT2G18890||AT2G18470 | protein kinase family protein | GO:0016301|kinase activity;GO:0009738|abscisic acid mediated signaling pathway;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS12205 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1005:rna-TAV2_LOCUS8818,rna-TAV2_LOCUS8824 | AT1G13210 | ACA.l; ACA.l (autoinhibited Ca2+/ATPase II); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / calmodulin binding | GO:0005516|calmodulin binding;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0015914|phospholipid transport;GO:0006754|ATP biosynthetic process | rna-TAV2_LOCUS2147 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1016:rna-TAV2_LOCUS9111,rna-TAV2_LOCUS9112 | AT3G03826 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS18627 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1018:rna-TAV2_LOCUS9153,rna-TAV2_LOCUS9154 | AT3G05620||AT3G05610||AT5G27870 | pectinesterase family protein | GO:0004857|enzyme inhibitor activity;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity | rna-TAV2_LOCUS4948 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1019:rna-TAV2_LOCUS9171,rna-TAV2_LOCUS9172 | AT3G13040||AT3G13020 | hAT dimerisation domain-containing protein||myb family transcription factor | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0005575|cellular_component;GO:0046983|protein dimerization activity;GO:0008150|biological_process | rna-TAV2_LOCUS18466 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1027:rna-TAV2_LOCUS9290,rna-TAV2_LOCUS11203 | AT2G16890||AT5G14860 | UDP-glucoronosyl/UDP-glucosyl transferase family protein||transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0005575|cellular_component | rna-TAV2_LOCUS20669 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1037:rna-TAV2_LOCUS9571,rna-TAV2_LOCUS9572 | AT3G10720||AT3G10710||AT5G04970 | pectinesterase family protein||pectinesterase, putative | GO:0004857|enzyme inhibitor activity;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity | rna-TAV2_LOCUS20134 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1045:rna-TAV2_LOCUS9768,rna-TAV2_LOCUS10559 | AT3G10595||AT5G04760 | myb family transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | rna-TAV2_LOCUS11461 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1046:rna-TAV2_LOCUS9779,rna-TAV2_LOCUS11741 | AT3G17225||AT3G17227 | ||invertase/pectin methylesterase inhibitor family protein | ;GO:0046910|pectinesterase inhibitor activity;GO:0008150|biological_process | rna-TAV2_LOCUS2183 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1066:rna-TAV2_LOCUS12510,rna-TAV2_LOCUS12511 | AT2G05350 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS5640 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1070:rna-TAV2_LOCUS12571,rna-TAV2_LOCUS12567 | AT2G37520||AT2G37440||AT3G53680 | PHD finger transcription factor, putative||PHD finger family protein||endonuclease/exonuclease/phosphatase family protein | GO:0005515|protein binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0005634|nucleus;GO:0016787|hydrolase activity;GO:0003677|DNA binding | rna-TAV2_LOCUS15573 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1075:rna-TAV2_LOCUS12698,rna-TAV2_LOCUS12705 | AT2G39820||AT2G39810||AT3G55620 | eukaryotic translation initiation factor 6, putative / eIF-6, putative||emb1624; emb1624 (embryo defective 1624); ribosome binding / translation initiation factor||HOS1; HOS1; ubiquitin-protein ligase | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0016567|protein ubiquitination;GO:0043022|ribosome binding;GO:0005730|nucleolus;GO:0016481|negative regulation of transcription;GO:0004842|ubiquitin-protein ligase activity;GO:0005737|cytoplasm;GO:0009793|embryonic development ending in seed dormancy;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0042256|mature ribosome assembly;GO:0005634|nucleus | rna-TAV2_LOCUS16103 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1077:rna-TAV2_LOCUS12821,rna-TAV2_LOCUS14712 | AT2G30340||AT2G30130 | ASL5, LBD12, PCK1; ASL5; DNA binding / protein binding||LBD13; LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13) | GO:0003674|molecular_function;GO:0005515|protein binding;GO:0016020|membrane;GO:0009965|leaf morphogenesis;GO:0010016|shoot morphogenesis;GO:0008150|biological_process;GO:0003677|DNA binding | rna-TAV2_LOCUS4633 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1078:rna-TAV2_LOCUS12834,rna-TAV2_LOCUS12513 | AT2G24360||AT4G31170 | serine/threonine/tyrosine kinase, putative||protein kinase family protein | GO:0016301|kinase activity;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004713|protein tyrosine kinase activity;GO:0004712|protein serine/threonine/tyrosine kinase activity | rna-TAV2_LOCUS24905 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1079:rna-TAV2_LOCUS12851,rna-TAV2_LOCUS14944 | AT2G04800 | unknown protein | GO:0006499|N-terminal protein myristoylation;GO:0005575|cellular_component;GO:0003674|molecular_function | rna-TAV2_LOCUS5753 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1088:rna-TAV2_LOCUS13118,rna-TAV2_LOCUS13562 | AT2G36830||AT3G26520 | GAMMA-TIP, TIP1;1, GAMMA-TIP1; GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN); water channel||TIP2, SITIP, GAMMA-TIP2, TIP1;2; TIP2 (TONOPLAST INTRINSIC PROTEIN 2); water channel | GO:0005773|vacuole;GO:0000326|protein storage vacuole;GO:0005886|plasma membrane;GO:0030104|water homeostasis;GO:0006810|transport;GO:0005783|endoplasmic reticulum;GO:0009507|chloroplast;GO:0015840|urea transport;GO:0015250|water channel activity;GO:0042742|defense response to bacterium;GO:0009740|gibberellic acid mediated signaling pathway;GO:0016020|membrane;GO:0009941|chloroplast envelope;GO:0042807|central vacuole;GO:0009651|response to salt stress;GO:0015204|urea transmembrane transporter activity;GO:0009705|plant-type vacuole membrane;GO:0006833|water transport;GO:0043674|columella | rna-TAV2_LOCUS5192 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1097:rna-TAV2_LOCUS13431,rna-TAV2_LOCUS13433 | AT2G33270||AT1G08570 | ACHT4; ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor||ACHT3; ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) | GO:0016671|oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;GO:0005515|protein binding;GO:0031969|chloroplast membrane;GO:0045454|cell redox homeostasis;GO:0009570|chloroplast stroma;GO:0009507|chloroplast | rna-TAV2_LOCUS3795 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1101:rna-TAV2_LOCUS13459,rna-TAV2_LOCUS14468 | AT2G48150||AT3G63080 | ATGPX4; ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase||ATGPX5, MEE42; ATGPX5 (glutathione peroxidase 5); glutathione peroxidase | GO:0005829|cytosol;GO:0004602|glutathione peroxidase activity;GO:0005886|plasma membrane;GO:0009793|embryonic development ending in seed dormancy;GO:0005783|endoplasmic reticulum;GO:0006499|N-terminal protein myristoylation;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS15498 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1105:rna-TAV2_LOCUS13567,rna-TAV2_LOCUS13923 | AT3G25820||AT2G24210 | ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase||TPS10; TPS10 (terpene synthase 10); (E)-beta-ocimene synthase/ myrcene synthase | GO:0009753|response to jasmonic acid stimulus;GO:0016099|monoterpenoid biosynthetic process;GO:0009611|response to wounding;GO:0050551|myrcene synthase activity | rna-TAV2_LOCUS15627 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1113:rna-TAV2_LOCUS13728,rna-TAV2_LOCUS13724 | AT3G53870||AT2G31610 | 40S ribosomal protein S3 (RPS3B)||40S ribosomal protein S3 (RPS3A) | GO:0005773|vacuole;GO:0006412|translation;GO:0003723|RNA binding;GO:0016020|membrane;GO:0022627|cytosolic small ribosomal subunit;GO:0003735|structural constituent of ribosome;GO:0009507|chloroplast;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009651|response to salt stress;GO:0009628|response to abiotic stimulus | rna-TAV2_LOCUS22870 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1118:rna-TAV2_LOCUS13763,rna-TAV2_LOCUS13760 | AT2G47140||AT2G47130 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS1999 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1124:rna-TAV2_LOCUS13812,rna-TAV2_LOCUS13813 | AT2G28940||AT2G28930||AT1G07570 | APK1A, APK1; APK1A; kinase/ protein serine/threonine kinase||APK1B; APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS451 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1132:rna-TAV2_LOCUS13983,rna-TAV2_LOCUS13982 | AT2G14365||AT2G32790 | ubiquitin-conjugating enzyme, putative||LCR84; LCR84 (Low-molecular-weight cysteine-rich 84) | GO:0019787|small conjugating protein ligase activity;GO:0004842|ubiquitin-protein ligase activity;GO:0012505|endomembrane system;GO:0043687|post-translational protein modification;GO:0051246|regulation of protein metabolic process;GO:0006464|protein modification process | rna-TAV2_LOCUS19418 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1134:rna-TAV2_LOCUS14051,rna-TAV2_LOCUS14050 | AT2G40160||AT2G40150||AT3G55990 | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, hypocotyl, root, leaf; EXPRESSED DURING: LP.02 two leaves visible; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: ESK1 (ESKIMO 1) (TAIR:AT3G55990.1); Has 710 Blast hits to 697 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 710; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||ESK1; ESK1 (ESKIMO 1)||INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: ESK1 (ESKIMO 1) (TAIR:AT3G55990.1); Has 712 Blast hits to 693 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 712; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0050826|response to freezing;GO:0045941|positive regulation of transcription;GO:0003674|molecular_function;GO:0012505|endomembrane system;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS4938 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1153:rna-TAV2_LOCUS14422,rna-TAV2_LOCUS13977 | AT2G31400 | pentatricopeptide (PPR) repeat-containing protein | GO:0009507|chloroplast | rna-TAV2_LOCUS3937 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1166:rna-TAV2_LOCUS14747,rna-TAV2_LOCUS14740 | AT2G31957||AT2G31953 | LCR75, LCR79; LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75)||LCR76; LCR76 (Low-molecular-weight cysteine-rich 76) | GO:0012505|endomembrane system;GO:0006952|defense response | rna-TAV2_LOCUS12733 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1170:rna-TAV2_LOCUS14910,rna-TAV2_LOCUS14907 | AT2G45110||AT1G65680 | ATEXPB4, EXPB4, ATHEXP BETA 1.1; ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4)||ATEXPB2, EXPB2, ATHEXP BETA 1.4; ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2) | GO:0005576|extracellular region;GO:0009831|plant-type cell wall modification during multidimensional cell growth;GO:0009826|unidimensional cell growth;GO:0009828|plant-type cell wall loosening;GO:0012505|endomembrane system | rna-TAV2_LOCUS7880 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1182:rna-TAV2_LOCUS15213,rna-TAV2_LOCUS15211 | AT1G79670||AT1G69730 | RFO1, WAKL22; RFO1 (RESISTANCE TO FUSARIUM OXYSPORUM 1); kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0006468|protein amino acid phosphorylation;GO:0009620|response to fungus | rna-TAV2_LOCUS15210 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1183:rna-TAV2_LOCUS15307,rna-TAV2_LOCUS15304 | AT3G58750||AT2G42790 | CSY2; CSY2 (citrate synthase 2); citrate (SI)-synthase||CSY3; CSY3 (citrate synthase 3); citrate (SI)-synthase | GO:0006635|fatty acid beta-oxidation;GO:0004108|citrate (SI)-synthase activity;GO:0006099|tricarboxylic acid cycle;GO:0005777|peroxisome | rna-TAV2_LOCUS13580 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1187:rna-TAV2_LOCUS15406,rna-TAV2_LOCUS15407 | AT1G80340||AT1G80330||AT1G15550 | GA4, ATGA3OX1, GA3OX1; GA3OX1 (GIBBERELLIN 3-OXIDASE 1); gibberellin 3-beta-dioxygenase/ transcription factor binding||ATGA3OX4, GA3OX4; GA3OX4 (GIBBERELLIN 3-OXIDASE 4); gibberellin 3-beta-dioxygenase||GA4H, ATGA3OX2, GA3OX2; GA3OX2 (GIBBERELLIN 3-OXIDASE 2); gibberellin 3-beta-dioxygenase | GO:0009639|response to red or far red light;GO:0009740|gibberellic acid mediated signaling pathway;GO:0009739|response to gibberellin stimulus;GO:0009845|seed germination;GO:0016707|gibberellin 3-beta-dioxygenase activity;GO:0005737|cytoplasm;GO:0005575|cellular_component;GO:0010114|response to red light;GO:0009686|gibberellin biosynthetic process;GO:0008134|transcription factor binding | rna-TAV2_LOCUS1824 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1194:rna-TAV2_LOCUS15558,rna-TAV2_LOCUS15554 | AT3G10845||AT3G48835||AT5G41690 | ||RNA binding / nucleic acid binding / nucleotide binding||RNA recognition motif (RRM)-containing protein | ;GO:0000166|nucleotide binding;GO:0003723|RNA binding;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS2651 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1198:rna-TAV2_LOCUS15618,rna-TAV2_LOCUS15619 | ATCG00790||AT1G72330||AT1G17290 | AlaAT1; AlaAT1 (ALANINE AMINOTRANSFERAS); ATP binding / L-alanine:2-oxoglutarate aminotransferase||RPL16; chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit||ALAAT2; ALAAT2 (ALANINE AMINOTRANSFERASE 2); ATP binding / L-alanine:2-oxoglutarate aminotransferase | GO:0005507|copper ion binding;GO:0004021|L-alanine:2-oxoglutarate aminotransferase activity;GO:0046686|response to cadmium ion;GO:0006096|glycolysis;GO:0005524|ATP binding;GO:0019272|L-alanine biosynthetic process from pyruvate;GO:0019481|L-alanine catabolic process, by transamination;GO:0001666|response to hypoxia;GO:0009507|chloroplast;GO:0009058|biosynthetic process;GO:0005739|mitochondrion | rna-TAV2_LOCUS3365 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1204:rna-TAV2_LOCUS15804,rna-TAV2_LOCUS17811 | AT1G77990||AT1G78000||AT1G22150 | AST56, SULTR2;2; AST56; sulfate transmembrane transporter||SULTR1;2, SEL1; SULTR1;2 (SULFATE TRANSPORTER 1;2); sulfate transmembrane transporter||SULTR1;3; SULTR1;3; sulfate transmembrane transporter | GO:0016020|membrane;GO:0008272|sulfate transport;GO:0009970|cellular response to sulfate starvation;GO:0015116|sulfate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0006810|transport | rna-TAV2_LOCUS1386 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1207:rna-TAV2_LOCUS15872,rna-TAV2_LOCUS15870 | AT3G54670 | TTN8, SMC1, ATSMC1; TTN8 (TITAN8); ATP binding / transporter | GO:0007059|chromosome segregation;GO:0005524|ATP binding;GO:0008278|cohesin complex;GO:0005215|transporter activity;GO:0007062|sister chromatid cohesion;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS15873 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1216:rna-TAV2_LOCUS16059,rna-TAV2_LOCUS18228 | AT4G20095 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS23862 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1222:rna-TAV2_LOCUS16181,rna-TAV2_LOCUS17331 | AT3G55010 | ATPURM, PUR5; PUR5; ATP binding / phosphoribosylformylglycinamidine cyclo-ligase | GO:0004641|phosphoribosylformylglycinamidine cyclo-ligase activity;GO:0005507|copper ion binding;GO:0006164|purine nucleotide biosynthetic process;GO:0005524|ATP binding;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS17435 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1227:rna-TAV2_LOCUS16394,rna-TAV2_LOCUS16402 | AT3G60600||AT2G45140 | PVA12; PVA12 (PLANT VAP HOMOLOG 12); structural molecule||VAP27-1, VAP, (AT)VAP, VAP27; VAP (VESICLE ASSOCIATED PROTEIN); protein binding | GO:0005829|cytosol;GO:0005515|protein binding;GO:0005198|structural molecule activity;GO:0000326|protein storage vacuole;GO:0005886|plasma membrane;GO:0005789|endoplasmic reticulum membrane;GO:0016021|integral to membrane;GO:0046907|intracellular transport;GO:0005783|endoplasmic reticulum;GO:0005634|nucleus | rna-TAV2_LOCUS13144 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1241:rna-TAV2_LOCUS16770,rna-TAV2_LOCUS16768 | AT1G67330 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS16769 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1243:rna-TAV2_LOCUS16789,rna-TAV2_LOCUS17951 | AT3G60100||AT2G44350 | ATCS, CSY4; ATCS; ATP binding / ATP citrate synthase/ citrate (SI)-synthase||CSY5; CSY5 (citrate synthase 5); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer | GO:0003878|ATP citrate synthase activity;GO:0004108|citrate (SI)-synthase activity;GO:0006099|tricarboxylic acid cycle;GO:0046686|response to cadmium ion;GO:0044262|cellular carbohydrate metabolic process;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0005618|cell wall;GO:0046912|transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS14416 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1246:rna-TAV2_LOCUS16822,rna-TAV2_LOCUS16821 | AT1G76580||AT1G20980 | SPL14, FBR6, SPL1R2, ATSPL14; SPL14 (squamosa promoter binding protein-like 14); DNA binding / transcription activator/ transcription factor||transcription factor | GO:0042742|defense response to bacterium;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0005886|plasma membrane;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | rna-TAV2_LOCUS295 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1261:rna-TAV2_LOCUS17044,rna-TAV2_LOCUS17043 | AT3G54540 | ATGCN4; ATGCN4; transporter | GO:0005215|transporter activity | rna-TAV2_LOCUS24008 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1263:rna-TAV2_LOCUS17104,rna-TAV2_LOCUS17598 | AT3G13950 | unknown protein | GO:0003674|molecular_function | rna-TAV2_LOCUS11312 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1270:rna-TAV2_LOCUS17270,rna-TAV2_LOCUS17269 | AT3G62750||AT4G27830||AT3G62740 | BGLU8; BGLU8 (BETA GLUCOSIDASE 8); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU7; BGLU7 (BETA GLUCOSIDASE 7); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU10; BGLU10 (BETA GLUCOSIDASE 10); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0005773|vacuole;GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | rna-TAV2_LOCUS10484 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1271:rna-TAV2_LOCUS17275,rna-TAV2_LOCUS17274 | AT1G17130 | cell cycle control protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS2575 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1273:rna-TAV2_LOCUS17307,rna-TAV2_LOCUS16165 | AT3G58570||AT3G58510||AT2G42520 | DEAD box RNA helicase, putative||DEAD box RNA helicase, putative (RH11) | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0005777|peroxisome;GO:0005730|nucleolus;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0009507|chloroplast;GO:0008026|ATP-dependent helicase activity | rna-TAV2_LOCUS14285 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1276:rna-TAV2_LOCUS17328,rna-TAV2_LOCUS17327 | AT3G47450 | ATNOS1, NOS1, ATNOA1, NOA1, RIF1; NOA1 (NO ASSOCIATED 1); GTPase/ nitric-oxide synthase | GO:0009657|plastid organization;GO:0010322|regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway;GO:0003924|GTPase activity;GO:0048366|leaf development;GO:0010193|response to ozone;GO:0005739|mitochondrion;GO:0010027|thylakoid membrane organization;GO:0051246|regulation of protein metabolic process;GO:0009507|chloroplast;GO:0006809|nitric oxide biosynthetic process;GO:0006979|response to oxidative stress | rna-TAV2_LOCUS4608 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1284:rna-TAV2_LOCUS17571,rna-TAV2_LOCUS16646 | AT5G41690 | RNA binding / nucleic acid binding / nucleotide binding | GO:0000166|nucleotide binding;GO:0003723|RNA binding;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS2651 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1285:rna-TAV2_LOCUS17636,rna-TAV2_LOCUS17637 | - | - | - | rna-TAV2_LOCUS21323 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1302:rna-TAV2_LOCUS17990,rna-TAV2_LOCUS17989 | AT1G70120||AT1G71480 | nuclear transport factor 2 (NTF2) family protein||unknown protein | GO:0009507|chloroplast;GO:0006810|transport;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS18261 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1303:rna-TAV2_LOCUS18027,rna-TAV2_LOCUS16892 | AT4G09670||AT1G66130 | oxidoreductase N-terminal domain-containing protein||oxidoreductase family protein | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0009055|electron carrier activity | rna-TAV2_LOCUS21119 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1306:rna-TAV2_LOCUS18063,rna-TAV2_LOCUS18060 | AT3G13490 | OVA5, ATKRS-2; OVA5 (OVULE ABORTION 5); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | GO:0006418|tRNA aminoacylation for protein translation;GO:0003676|nucleic acid binding;GO:0005524|ATP binding;GO:0005737|cytoplasm;GO:0048481|ovule development;GO:0004812|aminoacyl-tRNA ligase activity;GO:0000166|nucleotide binding;GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0004824|lysine-tRNA ligase activity | rna-TAV2_LOCUS11699 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1316:rna-TAV2_LOCUS18479,rna-TAV2_LOCUS18480 | AT5G52470 | FIB1, FBR1, ATFIB1, ATFBR1, SKIP7; FIB1 (FIBRILLARIN 1); snoRNA binding | GO:0016020|membrane;GO:0005730|nucleolus;GO:0001510|RNA methylation;GO:0006364|rRNA processing;GO:0030515|snoRNA binding | rna-TAV2_LOCUS25863 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1319:rna-TAV2_LOCUS18513,rna-TAV2_LOCUS18511 | AT5G53520||AT5G53510||AT4G27730 | ATOPT9, OPT9; ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9); oligopeptide transporter||ATOPT6, OPT6; OPT6 (OLIGOPEPTIDE TRANSPORTER 1); oligopeptide transporter||ATOPT8, OPT8; ATOPT8 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 8); oligopeptide transporter | GO:0006857|oligopeptide transport;GO:0015198|oligopeptide transporter activity;GO:0005886|plasma membrane;GO:0016020|membrane | rna-TAV2_LOCUS25039 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1320:rna-TAV2_LOCUS18519,rna-TAV2_LOCUS18520 | AT5G03790 | ATHB51, LMI1, HB51; HB51; DNA binding / sequence-specific DNA binding / transcription factor | GO:0045941|positive regulation of transcription;GO:0043565|sequence-specific DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0009965|leaf morphogenesis;GO:0003700|transcription factor activity;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0005634|nucleus;GO:0010434|bract formation;GO:0003677|DNA binding | rna-TAV2_LOCUS11910 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1322:rna-TAV2_LOCUS18568,rna-TAV2_LOCUS18565 | AT5G13750||AT5G13740 | ZIF1; ZIF1 (ZINC INDUCED FACILITATOR 1); carbohydrate transmembrane transporter/ sugar:hydrogen symporter/ tetracycline:hydrogen antiporter||ZIFL1; ZIFL1 (ZINC INDUCED FACILITATOR-like 1); tetracycline:hydrogen antiporter | GO:0016020|membrane;GO:0015520|tetracycline:hydrogen antiporter activity;GO:0009705|plant-type vacuole membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0009624|response to nematode;GO:0010043|response to zinc ion;GO:0055069|zinc ion homeostasis;GO:0005351|sugar:hydrogen symporter activity | rna-TAV2_LOCUS26365 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1328:rna-TAV2_LOCUS18704,rna-TAV2_LOCUS20111 | AT5G02800||AT5G18610 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS20288 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1333:rna-TAV2_LOCUS18796,rna-TAV2_LOCUS18798 | AT5G21326||AT5G21222||AT2G26980 | CIPK3; CIPK3 (CBL-INTERACTING PROTEIN KINASE 3); kinase/ protein kinase/ protein serine/threonine kinase||protein kinase family protein / NAF domain-containing protein||protein kinase family protein | GO:0005634|nucleus;GO:0009737|response to abscisic acid stimulus;GO:0016301|kinase activity;GO:0009735|response to cytokinin stimulus;GO:0009738|abscisic acid mediated signaling pathway;GO:0009845|seed germination;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0005737|cytoplasm;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity;GO:0009628|response to abiotic stimulus | rna-TAV2_LOCUS14931 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1334:rna-TAV2_LOCUS18799,rna-TAV2_LOCUS21289 | AT5G21150 | PAZ domain-containing protein / piwi domain-containing protein | GO:0005575|cellular_component;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS21948 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1341:rna-TAV2_LOCUS19000,rna-TAV2_LOCUS21634 | AT4G00740||AT4G00750||AT2G45750 | dehydration-responsive protein-related||dehydration-responsive family protein | GO:0005794|Golgi apparatus;GO:0008150|biological_process | rna-TAV2_LOCUS14473 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1344:rna-TAV2_LOCUS19052,rna-TAV2_LOCUS19055 | AT4G25570 | ACYB-2; ACYB-2; carbon-monoxide oxygenase | GO:0005773|vacuole;GO:0009507|chloroplast;GO:0008805|carbon-monoxide oxygenase activity;GO:0016021|integral to membrane | rna-TAV2_LOCUS25902 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1349:rna-TAV2_LOCUS19145,rna-TAV2_LOCUS19146 | AT3G20997||AT3G61177 | LCR53; LCR53 (Low-molecular-weight cysteine-rich 53)||LCR55; LCR55 (Low-molecular-weight cysteine-rich 55) | GO:0012505|endomembrane system;GO:0006952|defense response | rna-TAV2_LOCUS11671 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1351:rna-TAV2_LOCUS19187,rna-TAV2_LOCUS19194 | AT4G08290||AT4G08300||AT1G44800 | nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0016020|membrane | rna-TAV2_LOCUS2656 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1355:rna-TAV2_LOCUS19268,rna-TAV2_LOCUS19267 | AT5G19520 | MSL9; MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9); mechanically-gated ion channel | GO:0050982|detection of mechanical stimulus;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0005634|nucleus;GO:0008381|mechanically-gated ion channel activity | rna-TAV2_LOCUS13872 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1357:rna-TAV2_LOCUS19325,rna-TAV2_LOCUS19322 | AT5G07740||AT5G07650 | formin homology 2 domain-containing protein / FH2 domain-containing protein||AP004275 P0453E05.6 {Oryza sativa (japonica cultivar-group)}||pseudogene, formin homology 2 (FH2) domain-containing protein, contains formin homology 2 domain, Pfam:PF02128; blastp match of 59% identity and 3.3e-175 P-value to GP|27817931|dbj|BAC55695.1 | ;GO:0016043|cellular component organization;GO:0003779|actin binding;GO:0030036|actin cytoskeleton organization;GO:0009507|chloroplast | rna-TAV2_LOCUS556 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1363:rna-TAV2_LOCUS19394,rna-TAV2_LOCUS19392 | AT5G20390||AT5G20330 | BETAG4; BETAG4; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||beta-1,3-glucanase, putative | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | rna-TAV2_LOCUS22350 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1366:rna-TAV2_LOCUS19432,rna-TAV2_LOCUS19433 | AT5G52340||AT5G03540 | ATEXO70A2; ATEXO70A2 (exocyst subunit EXO70 family protein A2); protein binding||ATEXO70A1; ATEXO70A1 (exocyst subunit EXO70 family protein A1); protein binding | GO:0005829|cytosol;GO:0016020|membrane;GO:0006904|vesicle docking during exocytosis;GO:0005515|protein binding;GO:0000145|exocyst;GO:0048364|root development;GO:0010102|lateral root morphogenesis;GO:0005886|plasma membrane;GO:0006887|exocytosis;GO:0005634|nucleus | rna-TAV2_LOCUS21670 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1375:rna-TAV2_LOCUS19633,rna-TAV2_LOCUS19626 | AT4G02860||AT4G02850 | phenazine biosynthesis PhzC/PhzF family protein||catalytic | GO:0009058|biosynthetic process;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003824|catalytic activity | rna-TAV2_LOCUS3545 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1378:rna-TAV2_LOCUS19684,rna-TAV2_LOCUS19683 | AT2G42470 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS22094 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1396:rna-TAV2_LOCUS19869,rna-TAV2_LOCUS19870 | AT5G50800||AT5G50790||AT4G25010 | nodulin MtN3 family protein | GO:0003674|molecular_function;GO:0016020|membrane;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0008150|biological_process | rna-TAV2_LOCUS23466 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1406:rna-TAV2_LOCUS20128,rna-TAV2_LOCUS20127 | AT4G05160 | 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative | GO:0016207|4-coumarate-CoA ligase activity;GO:0009695|jasmonic acid biosynthetic process;GO:0004321|fatty-acyl-CoA synthase activity;GO:0005777|peroxisome | rna-TAV2_LOCUS4830 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1407:rna-TAV2_LOCUS20136,rna-TAV2_LOCUS20135 | AT1G76690||AT1G76680 | OPR2, ATOPR2; OPR2||OPR1; OPR1; 12-oxophytodienoate reductase | GO:0009751|response to salicylic acid stimulus;GO:0016629|12-oxophytodienoate reductase activity;GO:0046686|response to cadmium ion;GO:0031407|oxylipin metabolic process;GO:0005575|cellular_component;GO:0006629|lipid metabolic process;GO:0009611|response to wounding;GO:0010150|leaf senescence | rna-TAV2_LOCUS16314 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1421:rna-TAV2_LOCUS20412,rna-TAV2_LOCUS20414 | AT5G10050||AT5G65205 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS7787 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1426:rna-TAV2_LOCUS20477,rna-TAV2_LOCUS20476 | AT4G11850||AT2G42010 | PLDBETA1, PLDBETA; PLDBETA1 (PHOSPHOLIPASE D BETA 1); phospholipase D||PLDGAMMA1, MEE54; PLDGAMMA1; phospholipase D | GO:0005515|protein binding;GO:0046686|response to cadmium ion;GO:0004630|phospholipase D activity;GO:0005886|plasma membrane;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009793|embryonic development ending in seed dormancy | rna-TAV2_LOCUS1393 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1442:rna-TAV2_LOCUS20774,rna-TAV2_LOCUS20775 | AT5G01020 | protein kinase family protein | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity | rna-TAV2_LOCUS8660 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1446:rna-TAV2_LOCUS20902,rna-TAV2_LOCUS20903 | AT1G17615||AT4G12430||AT4G22590 | disease resistance protein (TIR-NBS class), putative||trehalose-6-phosphate phosphatase, putative | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0003824|catalytic activity;GO:0004805|trehalose-phosphatase activity;GO:0005992|trehalose biosynthetic process;GO:0007165|signal transduction;GO:0008152|metabolic process;GO:0004888|transmembrane receptor activity;GO:0009507|chloroplast | rna-TAV2_LOCUS25244 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1454:rna-TAV2_LOCUS21413,rna-TAV2_LOCUS21415 | AT5G05520||AT3G11070 | outer membrane OMP85 family protein | GO:0009536|plastid;GO:0003674|molecular_function;GO:0019867|outer membrane;GO:0008150|biological_process;GO:0005739|mitochondrion | rna-TAV2_LOCUS11830 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1460:rna-TAV2_LOCUS21466,rna-TAV2_LOCUS20895 | AT3G11710 | ATKRS-1; ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1); ATP binding / aminoacyl-tRNA ligase/ lysine-tRNA ligase/ nucleic acid binding / nucleotide binding | GO:0005737|cytoplasm;GO:0006418|tRNA aminoacylation for protein translation;GO:0006412|translation | rna-TAV2_LOCUS11361 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1463:rna-TAV2_LOCUS21585,rna-TAV2_LOCUS21588 | AT5G22910||AT5G22900||AT3G44900 | ATCHX9, CHX9; ATCHX9; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX4, CHX4; ATCHX4 (CATION/H+ EXCHANGER 4); monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX3, CHX3; ATCHX3; monovalent cation:proton antiporter | GO:0015385|sodium:hydrogen antiporter activity;GO:0016021|integral to membrane;GO:0006812|cation transport;GO:0005451|monovalent cation:hydrogen antiporter activity | rna-TAV2_LOCUS16937 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1474:rna-TAV2_LOCUS21846,rna-TAV2_LOCUS21838 | AT4G10310 | HKT1, ATHKT1; HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1); sodium ion transmembrane transporter | GO:0006814|sodium ion transport;GO:0006970|response to osmotic stress;GO:0005886|plasma membrane;GO:0006813|potassium ion transport;GO:0009651|response to salt stress;GO:0015081|sodium ion transmembrane transporter activity | rna-TAV2_LOCUS21839 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1488:rna-TAV2_LOCUS22260,rna-TAV2_LOCUS22259 | AT5G19110||AT5G19100 | extracellular dermal glycoprotein-related / EDGP-related | GO:0006499|N-terminal protein myristoylation;GO:0012505|endomembrane system;GO:0006508|proteolysis | rna-TAV2_LOCUS1835 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1489:rna-TAV2_LOCUS22263,rna-TAV2_LOCUS22262 | AT3G20550 | DDL; DDL (DAWDLE) | GO:0003674|molecular_function;GO:0005829|cytosol;GO:0035196|production of miRNAs involved in gene silencing by miRNA;GO:0008283|cell proliferation;GO:0009507|chloroplast;GO:0005634|nucleus | rna-TAV2_LOCUS10487 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1493:rna-TAV2_LOCUS22544,rna-TAV2_LOCUS22543 | AT4G26120||AT1G64280 | NPR1, SAI1, NIM1, ATNPR1; NPR1 (NONEXPRESSER OF PR GENES 1); protein binding / transcription activator||ankyrin repeat family protein / BTB/POZ domain-containing protein | GO:0031348|negative regulation of defense response;GO:0009862|systemic acquired resistance, salicylic acid mediated signaling pathway;GO:0005515|protein binding;GO:0009627|systemic acquired resistance;GO:0005737|cytoplasm;GO:0010200|response to chitin;GO:0009408|response to heat;GO:0005575|cellular_component;GO:0009617|response to bacterium;GO:0009625|response to insect;GO:0050832|defense response to fungus;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0009611|response to wounding;GO:0008219|cell death | rna-TAV2_LOCUS6235 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1505:rna-TAV2_LOCUS22874,rna-TAV2_LOCUS22565 | AT3G61175 | LCR52; LCR52 (Low-molecular-weight cysteine-rich 52) | GO:0012505|endomembrane system;GO:0006952|defense response | rna-TAV2_LOCUS23223 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1512:rna-TAV2_LOCUS23069,rna-TAV2_LOCUS25382 | AT4G17760 | damaged DNA binding / exodeoxyribonuclease III | GO:0008853|exodeoxyribonuclease III activity;GO:0005634|nucleus;GO:0003684|damaged DNA binding;GO:0006281|DNA repair | rna-TAV2_LOCUS23068 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1520:rna-TAV2_LOCUS23235,rna-TAV2_LOCUS23230 | AT4G25850||AT4G25860||AT5G57240 | ORP4C; ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C); oxysterol binding||ORP4A; ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A); oxysterol binding||ORP4B; ORP4B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4B); oxysterol binding | GO:0008142|oxysterol binding;GO:0008202|steroid metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS18498 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1533:rna-TAV2_LOCUS23526,rna-TAV2_LOCUS23008 | AT4G30660||AT4G30650||AT2G24040 | hydrophobic protein, putative / low temperature and salt responsive protein, putative | GO:0042538|hyperosmotic salinity response;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0009409|response to cold;GO:0050832|defense response to fungus | rna-TAV2_LOCUS13217 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1535:rna-TAV2_LOCUS23568,rna-TAV2_LOCUS23186 | AT5G39350||AT1G77570 | DNA binding / transcription factor||pentatricopeptide (PPR) repeat-containing protein | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0012505|endomembrane system;GO:0005634|nucleus;GO:0005739|mitochondrion;GO:0003677|DNA binding | rna-TAV2_LOCUS25458 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1543:rna-TAV2_LOCUS23780,rna-TAV2_LOCUS23781 | AT2G26020||AT5G44430 | PDF1.2b; PDF1.2b (plant defensin 1.2b)||PDF1.2c; PDF1.2c (plant defensin 1.2c) | GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0006952|defense response;GO:0003674|molecular_function | rna-TAV2_LOCUS18068 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1551:rna-TAV2_LOCUS23966,rna-TAV2_LOCUS22662 | AT4G29305||AT4G29290 | LCR26; LCR26 (Low-molecular-weight cysteine-rich 26)||LCR25; LCR25 (Low-molecular-weight cysteine-rich 25) | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS17263 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1555:rna-TAV2_LOCUS24060,rna-TAV2_LOCUS24552 | AT4G36010||AT4G36000||AT1G75040 | PR5, PR-5; PR5 (PATHOGENESIS-RELATED GENE 5)||pathogenesis-related thaumatin family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to other organism; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24180.1); Has 1043 Blast hits to 945 proteins in 126 species: Archae - 0; Bacteria - 6; Metazoa - 42; Fungi - 41; Plants - 948; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink). | GO:0005773|vacuole;GO:0010224|response to UV-B;GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0048046|apoplast;GO:0005618|cell wall;GO:0051707|response to other organism;GO:0031225|anchored to membrane;GO:0005575|cellular_component;GO:0031540|regulation of anthocyanin biosynthetic process;GO:0009627|systemic acquired resistance | rna-TAV2_LOCUS17781 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1558:rna-TAV2_LOCUS24092,rna-TAV2_LOCUS24093 | AT4G19420||AT4G19410||AT5G45280 | pectinacetylesterase, putative||pectinacetylesterase family protein | GO:0016020|membrane;GO:0004091|carboxylesterase activity;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0008150|biological_process | rna-TAV2_LOCUS7601 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1559:rna-TAV2_LOCUS24151,rna-TAV2_LOCUS25462 | AT5G39940 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HI0933-like protein (InterPro:IPR004792); Has 2776 Blast hits to 2776 proteins in 871 species: Archae - 18; Bacteria - 1933; Metazoa - 0; Fungi - 2; Plants - 19; Viruses - 0; Other Eukaryotes - 804 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS19831 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1564:rna-TAV2_LOCUS24219,rna-TAV2_LOCUS25035 | AT4G27760||AT4G27740||AT5G53470 | FEY, FEY3; FEY (FOREVER YOUNG); binding / catalytic/ oxidoreductase||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27745.1); Has 684 Blast hits to 682 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 132; Plants - 111; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).||ACBP1, ACBP; ACBP1 (ACYL-COA BINDING PROTEIN 1); acyl-CoA binding / lead ion binding | GO:0005488|binding;GO:0003674|molecular_function;GO:0003824|catalytic activity;GO:0032791|lead ion binding;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0009409|response to cold;GO:0006869|lipid transport;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006629|lipid metabolic process;GO:0010288|response to lead ion;GO:0000062|acyl-CoA binding | rna-TAV2_LOCUS18814 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1566:rna-TAV2_LOCUS24245,rna-TAV2_LOCUS24593 | AT4G13190||AT3G07070 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS9815 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1586:rna-TAV2_LOCUS24662,rna-TAV2_LOCUS24203 | AT5G37150||AT5G52090 | tRNA-splicing endonuclease positive effector-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: tRNA-splicing endonuclease positive effector-related (TAIR:AT5G52090.1); Has 4236 Blast hits to 3442 proteins in 554 species: Archae - 133; Bacteria - 787; Metazoa - 1285; Fungi - 856; Plants - 359; Viruses - 41; Other Eukaryotes - 775 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS2942 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1591:rna-TAV2_LOCUS24923,rna-TAV2_LOCUS22511 | AT4G37520||AT5G67400 | peroxidase 50 (PER50) (P50) (PRXR2)||peroxidase 73 (PER73) (P73) (PRXR11) | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0009055|electron carrier activity | rna-TAV2_LOCUS7890 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1592:rna-TAV2_LOCUS24932,rna-TAV2_LOCUS24933 | AT4G28070||AT4G30490 | AFG1-like ATPase family protein | GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0016887|ATPase activity;GO:0008150|biological_process | rna-TAV2_LOCUS24353 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1596:rna-TAV2_LOCUS25059,rna-TAV2_LOCUS23924 | AT4G22756||AT4G22755||AT4G12110 | ||SMO1-1, ATSMO1, ATSMO1-1; SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic||SMO1-2, ATSMO1, ATSMO1-2, SMO1; SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic | ;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0000254|C-4 methylsterol oxidase activity;GO:0016126|sterol biosynthetic process | rna-TAV2_LOCUS19044 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1603:rna-TAV2_LOCUS25198,rna-TAV2_LOCUS23882 | AT2G19110||AT4G30110 | HMA4; HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter||HMA2; HMA2; cadmium-transporting ATPase | GO:0030001|metal ion transport;GO:0015434|cadmium-transporting ATPase activity;GO:0005515|protein binding;GO:0015691|cadmium ion transport;GO:0015086|cadmium ion transmembrane transporter activity;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0005385|zinc ion transmembrane transporter activity;GO:0016021|integral to membrane;GO:0006754|ATP biosynthetic process;GO:0008152|metabolic process;GO:0006829|zinc ion transport;GO:0012505|endomembrane system | rna-TAV2_LOCUS11031 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1619:rna-TAV2_LOCUS25488,rna-TAV2_LOCUS22480 | AT5G46570 | BSK2; BSK2 (BR-SIGNALING KINASE 2); ATP binding / binding / kinase/ protein kinase/ protein tyrosine kinase | GO:0005488|binding;GO:0016301|kinase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS7164 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1622:rna-TAV2_LOCUS25556,rna-TAV2_LOCUS24238 | AT4G14690||AT3G22840 | ELIP2; ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2); chlorophyll binding||ELIP1, ELIP; ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN); chlorophyll binding | GO:0010224|response to UV-B;GO:0010218|response to far red light;GO:0010380|regulation of chlorophyll biosynthetic process;GO:0016168|chlorophyll binding;GO:0009409|response to cold;GO:0010114|response to red light | rna-TAV2_LOCUS9830 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1626:rna-TAV2_LOCUS25676,rna-TAV2_LOCUS25677 | AT4G27300||AT4G27290 | ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||S-locus protein kinase, putative | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS25776 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1628:rna-TAV2_LOCUS25699,rna-TAV2_LOCUS23164 | AT4G38030||AT4G37950 | lyase | GO:0012505|endomembrane system;GO:0016829|lyase activity;GO:0008150|biological_process | rna-TAV2_LOCUS22839 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1634:rna-TAV2_LOCUS25793,rna-TAV2_LOCUS25795 | AT2G42550 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS14888 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1638:rna-TAV2_LOCUS25827,rna-TAV2_LOCUS25826 | AT4G25790||AT4G25780||AT5G57625 | allergen V5/Tpx-1-related family protein||pathogenesis-related protein, putative | GO:0005576|extracellular region;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS20955 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1642:rna-TAV2_LOCUS25900,rna-TAV2_LOCUS25901 | AT5G40540||AT3G27560 | protein kinase, putative||ATN1; ATN1; kinase/ protein serine/threonine kinase/ protein serine/threonine/tyrosine kinase/ protein tyrosine kinase | GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0005739|mitochondrion;GO:0004712|protein serine/threonine/tyrosine kinase activity | rna-TAV2_LOCUS7715 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1647:rna-TAV2_LOCUS25981,rna-TAV2_LOCUS25374 | AT2G39780 | RNS2; RNS2 (RIBONUCLEASE 2); RNA binding / endoribonuclease/ ribonuclease T2 | GO:0005773|vacuole;GO:0003723|RNA binding;GO:0033897|ribonuclease T2 activity;GO:0005622|intracellular;GO:0007568|aging;GO:0004521|endoribonuclease activity | rna-TAV2_LOCUS26 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1652:rna-TAV2_LOCUS4531,rna-TAV2_LOCUS4532 | AT1G08650 | PPCK1; PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE); kinase/ protein serine/threonine kinase | GO:0004674|protein serine/threonine kinase activity;GO:0016301|kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation | rna-TAV2_LOCUS2205 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1656:rna-TAV2_LOCUS4616,rna-TAV2_LOCUS4618 | AT2G47850 | zinc finger (CCCH-type) family protein | GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0003676|nucleic acid binding | rna-TAV2_LOCUS8226 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1664:rna-TAV2_LOCUS4783,rna-TAV2_LOCUS4784 | AT4G15550||AT4G14090 | UDP-glucoronosyl/UDP-glucosyl transferase family protein||IAGLU; IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE); UDP-glycosyltransferase/ transferase, transferring glycosyl groups | GO:0035251|UDP-glucosyltransferase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS12242 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1669:rna-TAV2_LOCUS4861,rna-TAV2_LOCUS4862 | AT5G39740||AT3G25520 | OLI7, RPL5B; 60S ribosomal protein L5 (RPL5B)||ATL5, PGY3, OLI5, RPL5A; ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural constituent of ribosome | GO:0005773|vacuole;GO:0009965|leaf morphogenesis;GO:0008283|cell proliferation;GO:0005886|plasma membrane;GO:0009507|chloroplast;GO:0005840|ribosome;GO:0042254|ribosome biogenesis;GO:0005737|cytoplasm;GO:0009955|adaxial/abaxial pattern formation;GO:0022626|cytosolic ribosome;GO:0016020|membrane;GO:0010015|root morphogenesis;GO:0005730|nucleolus;GO:0005634|nucleus;GO:0022625|cytosolic large ribosomal subunit;GO:0008097|5S rRNA binding;GO:0006412|translation;GO:0006913|nucleocytoplasmic transport;GO:0003735|structural constituent of ribosome | rna-TAV2_LOCUS11062 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1683:rna-TAV2_LOCUS8270,rna-TAV2_LOCUS8271 | AT5G40980||AT5G63500 | unknown protein | GO:0031225|anchored to membrane;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS25349 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1695:rna-TAV2_LOCUS8496,rna-TAV2_LOCUS8495 | AT1G21590||AT2G16750 | protein kinase family protein | GO:0016301|kinase activity;GO:0006950|response to stress;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS8494 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1704:rna-TAV2_LOCUS4220,rna-TAV2_LOCUS4221 | AT5G24080||AT5G60900||AT1G65790 | ARK1; ARK1 (A. THALIANA RECEPTOR KINASE 1); kinase/ protein kinase/ protein serine/threonine kinase/ transmembrane receptor protein kinase||RLK1; RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding||protein kinase family protein | GO:0005634|nucleus;GO:0016301|kinase activity;GO:0005529|sugar binding;GO:0046777|protein amino acid autophosphorylation;GO:0016020|membrane;GO:0019199|transmembrane receptor protein kinase activity;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS15048 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1723:rna-TAV2_LOCUS4273,rna-TAV2_LOCUS4274 | AT1G25560 | TEM1; TEM1 (TEMPRANILLO 1); transcription factor | GO:0003677|DNA binding;GO:0003700|transcription factor activity;GO:0009873|ethylene mediated signaling pathway;GO:0009507|chloroplast;GO:0048573|photoperiodism, flowering | rna-TAV2_LOCUS26380 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1743:rna-TAV2_LOCUS22399,rna-TAV2_LOCUS22398 | AT1G15530 | receptor lectin kinase, putative | GO:0005773|vacuole;GO:0016301|kinase activity;GO:0030246|carbohydrate binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation | rna-TAV2_LOCUS1826 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1748:rna-TAV2_LOCUS26192,rna-TAV2_LOCUS26191 | AT5G50140 | ankyrin repeat family protein | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | rna-TAV2_LOCUS26185 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1755:rna-TAV2_LOCUS26276,rna-TAV2_LOCUS26275 | AT1G17710 | phosphatase | GO:0008152|metabolic process;GO:0016791|phosphatase activity | rna-TAV2_LOCUS2161 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1760:rna-TAV2_LOCUS4418,rna-TAV2_LOCUS4420 | AT3G14840||AT1G53440 | leucine-rich repeat family protein / protein kinase family protein | GO:0016301|kinase activity;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS4419 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA294:rna-TAV2_LOCUS1014,rna-TAV2_LOCUS1015,rna-TAV2_LOCUS3623 | AT1G32585 | VQ motif-containing protein-related | GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA295:rna-TAV2_LOCUS1028,rna-TAV2_LOCUS1027,rna-TAV2_LOCUS1026 | - | - | - | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA304:rna-TAV2_LOCUS1511,rna-TAV2_LOCUS1515,rna-TAV2_LOCUS1514 | AT1G30400||AT1G30410 | ATMRP1, EST1, ATABCC1, MRP1; MRP1 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase||ATMRP13; ATMRP13; ATPase, coupled to transmembrane movement of substances | GO:0005773|vacuole;GO:0008559|xenobiotic-transporting ATPase activity;GO:0005774|vacuolar membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0000325|plant-type vacuole;GO:0006810|transport | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA307:rna-TAV2_LOCUS168,rna-TAV2_LOCUS167,rna-TAV2_LOCUS165 | - | - | - | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA309:rna-TAV2_LOCUS1968,rna-TAV2_LOCUS1969,rna-TAV2_LOCUS3556 | AT1G14220||AT1G14210 | ribonuclease T2 family protein | GO:0003723|RNA binding;GO:0033897|ribonuclease T2 activity;GO:0004521|endoribonuclease activity;GO:0009651|response to salt stress;GO:0012505|endomembrane system;GO:0006499|N-terminal protein myristoylation | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA311:rna-TAV2_LOCUS2318,rna-TAV2_LOCUS2312,rna-TAV2_LOCUS2313 | AT2G27360||AT1G28670 | lipase, putative||ARAB-1; ARAB-1; carboxylesterase/ hydrolase, acting on ester bonds | GO:0006114|glycerol biosynthetic process;GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0006629|lipid metabolic process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA314:rna-TAV2_LOCUS2341,rna-TAV2_LOCUS2342,rna-TAV2_LOCUS2344 | AT1G10745 | Encodes a Maternally expressed gene (MEG) family protein | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA316:rna-TAV2_LOCUS2687,rna-TAV2_LOCUS3301,rna-TAV2_LOCUS3300 | AT1G21270||AT1G21230||AT1G21210 | WAK2; WAK2; ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase||WAK4; WAK4 (wall associated kinase 4); ATP binding / calcium ion binding / protein kinase/ protein serine/threonine kinase||WAK5; WAK5 (WALL ASSOCIATED KINASE 5); kinase/ protein serine/threonine kinase | GO:0009751|response to salicylic acid stimulus;GO:0016301|kinase activity;GO:0009992|cellular water homeostasis;GO:0009311|oligosaccharide metabolic process;GO:0009826|unidimensional cell growth;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0048527|lateral root development;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity;GO:0005509|calcium ion binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA318:rna-TAV2_LOCUS2779,rna-TAV2_LOCUS2778,rna-TAV2_LOCUS2776 | AT1G48400||AT1G48390 | F-box family protein||syntaxin-related family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA319:rna-TAV2_LOCUS281,rna-TAV2_LOCUS279,rna-TAV2_LOCUS286 | AT4G10270 | wound-responsive family protein | GO:0009611|response to wounding;GO:0003674|molecular_function | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA324:rna-TAV2_LOCUS3176,rna-TAV2_LOCUS3175,rna-TAV2_LOCUS3169 | AT1G08930||AT1G08920||AT1G08910 | sugar transporter, putative||EMB3001; EMB3001 (embryo defective 3001); zinc ion binding||ERD6; ERD6 (EARLY RESPONSE TO DEHYDRATION 6); carbohydrate transmembrane transporter/ sugar transmembrane transporter/ sugar:hydrogen symporter | GO:0009737|response to abscisic acid stimulus;GO:0016020|membrane;GO:0015145|monosaccharide transmembrane transporter activity;GO:0015749|monosaccharide transport;GO:0051119|sugar transmembrane transporter activity;GO:0009705|plant-type vacuole membrane;GO:0008270|zinc ion binding;GO:0015144|carbohydrate transmembrane transporter activity;GO:0009793|embryonic development ending in seed dormancy;GO:0016021|integral to membrane;GO:0010200|response to chitin;GO:0009414|response to water deprivation;GO:0005575|cellular_component;GO:0009651|response to salt stress;GO:0005351|sugar:hydrogen symporter activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA327:rna-TAV2_LOCUS3536,rna-TAV2_LOCUS1037,rna-TAV2_LOCUS1030 | AT1G69730 | protein kinase family protein | GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA329:rna-TAV2_LOCUS3747,rna-TAV2_LOCUS2383,rna-TAV2_LOCUS3748 | AT1G30170||AT1G05540||AT1G05550 | unknown protein | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA332:rna-TAV2_LOCUS392,rna-TAV2_LOCUS393,rna-TAV2_LOCUS394 | AT1G09910||AT1G09890||AT1G09880 | lyase | GO:0016829|lyase activity;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA334:rna-TAV2_LOCUS4075,rna-TAV2_LOCUS4076,rna-TAV2_LOCUS4077 | AT1G53830||AT1G53840 | ATPME1; ATPME1; pectinesterase||ATPME2; ATPME2; pectinesterase | GO:0005576|extracellular region;GO:0016020|membrane;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0030599|pectinesterase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA336:rna-TAV2_LOCUS490,rna-TAV2_LOCUS491,rna-TAV2_LOCUS493 | AT1G27250||AT1G27220 | paired amphipathic helix repeat-containing protein | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0003674|molecular_function;GO:0003676|nucleic acid binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA337:rna-TAV2_LOCUS545,rna-TAV2_LOCUS546,rna-TAV2_LOCUS1525 | AT1G12220||AT1G12290||AT4G10780 | RPS5; RPS5 (RESISTANT TO P. SYRINGAE 5); nucleotide binding||disease resistance protein (CC-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0009626|plant-type hypersensitive response;GO:0005515|protein binding;GO:0005622|intracellular;GO:0005524|ATP binding;GO:0009816|defense response to bacterium, incompatible interaction;GO:0006915|apoptosis;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA342:rna-TAV2_LOCUS946,rna-TAV2_LOCUS945,rna-TAV2_LOCUS948 | AT3G23955 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G25850.1). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA344:rna-TAV2_LOCUS5058,rna-TAV2_LOCUS5057,rna-TAV2_LOCUS5056 | AT5G47260||AT5G47250||AT5G45090 | ATP binding / GTP binding / nucleoside-triphosphatase/ nucleotide binding||AtPP2-A7; AtPP2-A7 (Phloem protein 2-A7); carbohydrate binding||disease resistance protein (CC-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005525|GTP binding;GO:0007165|signal transduction;GO:0030246|carbohydrate binding;GO:0006915|apoptosis;GO:0005575|cellular_component;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response;GO:0005739|mitochondrion | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA347:rna-TAV2_LOCUS5267,rna-TAV2_LOCUS5266,rna-TAV2_LOCUS5273 | AT5G63230||AT5G53610||AT5G63225 | glycosyl hydrolase family protein 17 | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA350:rna-TAV2_LOCUS5540,rna-TAV2_LOCUS5535,rna-TAV2_LOCUS5536 | AT1G63740||AT1G63880 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response;GO:0050832|defense response to fungus | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA351:rna-TAV2_LOCUS5544,rna-TAV2_LOCUS5552,rna-TAV2_LOCUS5550 | AT1G58190 | AtRLP9; AtRLP9 (Receptor Like Protein 9); protein binding | GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA352:rna-TAV2_LOCUS5611,rna-TAV2_LOCUS5612,rna-TAV2_LOCUS5613 | AT2G25295 | LCR81; LCR81 (Low-molecular-weight cysteine-rich 81) | GO:0012505|endomembrane system;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA353:rna-TAV2_LOCUS5628,rna-TAV2_LOCUS6804,rna-TAV2_LOCUS6803 | AT5G46900 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA354:rna-TAV2_LOCUS5688,rna-TAV2_LOCUS5690,rna-TAV2_LOCUS5691 | AT1G26795 | self-incompatibility protein-related | GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA355:rna-TAV2_LOCUS5898,rna-TAV2_LOCUS5904,rna-TAV2_LOCUS5903 | AT1G63205 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63200.1); Has 19 Blast hits to 19 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA356:rna-TAV2_LOCUS5978,rna-TAV2_LOCUS5981,rna-TAV2_LOCUS5980 | AT2G02950 | PKS1; PKS1 (PHYTOCHROME KINASE SUBSTRATE 1); protein binding | GO:0009638|phototropism;GO:0010218|response to far red light;GO:0005515|protein binding;GO:0010017|red or far-red light signaling pathway;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0009585|red, far-red light phototransduction;GO:0009958|positive gravitropism;GO:0010114|response to red light | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA357:rna-TAV2_LOCUS6030,rna-TAV2_LOCUS6028,rna-TAV2_LOCUS6029 | AT5G46200 | unknown protein | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA358:rna-TAV2_LOCUS6114,rna-TAV2_LOCUS6115,rna-TAV2_LOCUS6107 | AT5G66890||AT5G66900 | disease resistance protein (CC-NBS-LRR class), putative | GO:0005524|ATP binding;GO:0006952|defense response;GO:0006915|apoptosis;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA359:rna-TAV2_LOCUS6310,rna-TAV2_LOCUS5300,rna-TAV2_LOCUS7547 | AT3G58410 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA361:rna-TAV2_LOCUS6694,rna-TAV2_LOCUS6687,rna-TAV2_LOCUS7904 | AT3G48230||AT5G18460 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA363:rna-TAV2_LOCUS6704,rna-TAV2_LOCUS6703,rna-TAV2_LOCUS6705 | AT2G05180||AT1G28430 | CYP705A6; CYP705A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP705A24; CYP705A24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA364:rna-TAV2_LOCUS6717,rna-TAV2_LOCUS6708,rna-TAV2_LOCUS6709 | AT1G60986 | SCRL4; SCRL4 (SCR-Like 4) | GO:0007165|signal transduction;GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA366:rna-TAV2_LOCUS6924,rna-TAV2_LOCUS7826,rna-TAV2_LOCUS7821 | AT5G61600||AT5G61590 | ERF104; ethylene-responsive element-binding family protein||AP2 domain-containing transcription factor family protein | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009414|response to water deprivation;GO:0050832|defense response to fungus;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA369:rna-TAV2_LOCUS7212,rna-TAV2_LOCUS6035,rna-TAV2_LOCUS6036 | AT4G22180 | F-box family protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA370:rna-TAV2_LOCUS7247,rna-TAV2_LOCUS7241,rna-TAV2_LOCUS7242 | AT1G61190 | disease resistance protein (CC-NBS-LRR class), putative | GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006915|apoptosis;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA371:rna-TAV2_LOCUS7254,rna-TAV2_LOCUS7251,rna-TAV2_LOCUS5946 | AT5G49510 | PDF3; PDF3 (PREFOLDIN 3); unfolded protein binding | GO:0016272|prefoldin complex;GO:0006457|protein folding;GO:0051082|unfolded protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA372:rna-TAV2_LOCUS7317,rna-TAV2_LOCUS6171,rna-TAV2_LOCUS6168 | AT5G45510 | leucine-rich repeat family protein | GO:0005829|cytosol;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA373:rna-TAV2_LOCUS7325,rna-TAV2_LOCUS7326,rna-TAV2_LOCUS5354 | AT2G40050||AT1G61840 | DC1 domain-containing protein | GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA374:rna-TAV2_LOCUS7329,rna-TAV2_LOCUS7330,rna-TAV2_LOCUS7324 | AT1G61810||AT1G61820 | BGLU46; BGLU46 (BETA GLUCOSIDASE 46); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU45; BGLU45 (BETA-GLUCOSIDASE 45); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0009809|lignin biosynthetic process;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043169|cation binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA375:rna-TAV2_LOCUS7416,rna-TAV2_LOCUS7905,rna-TAV2_LOCUS7908 | AT2G04045||AT2G04046 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA379:rna-TAV2_LOCUS8051,rna-TAV2_LOCUS8047,rna-TAV2_LOCUS8046 | AT3G28710 | H+-transporting two-sector ATPase, putative | GO:0005773|vacuole;GO:0015078|hydrogen ion transmembrane transporter activity;GO:0005774|vacuolar membrane;GO:0015992|proton transport;GO:0005886|plasma membrane;GO:0000325|plant-type vacuole;GO:0046961|proton-transporting ATPase activity, rotational mechanism;GO:0015986|ATP synthesis coupled proton transport | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA380:rna-TAV2_LOCUS8147,rna-TAV2_LOCUS8149,rna-TAV2_LOCUS8151 | AT1G63350 | disease resistance protein (CC-NBS-LRR class), putative | GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA382:rna-TAV2_LOCUS10349,rna-TAV2_LOCUS9102,rna-TAV2_LOCUS10347 | AT1G49150 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA386:rna-TAV2_LOCUS10801,rna-TAV2_LOCUS10800,rna-TAV2_LOCUS10808 | AT5G35050 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA389:rna-TAV2_LOCUS11004,rna-TAV2_LOCUS10179,rna-TAV2_LOCUS10178 | AT3G23560 | ALF5; ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter | GO:0009636|response to toxin;GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0005215|transporter activity;GO:0015297|antiporter activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA390:rna-TAV2_LOCUS11255,rna-TAV2_LOCUS11254,rna-TAV2_LOCUS11249 | AT3G28410 | F-box family protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA392:rna-TAV2_LOCUS11555,rna-TAV2_LOCUS10237,rna-TAV2_LOCUS10239 | AT5G61720 | unknown protein | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA396:rna-TAV2_LOCUS11735,rna-TAV2_LOCUS11734,rna-TAV2_LOCUS11742 | AT3G17150||AT3G17152 | enzyme inhibitor/ pectinesterase||enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA398:rna-TAV2_LOCUS11756,rna-TAV2_LOCUS11757,rna-TAV2_LOCUS11754 | AT2G19990||AT2G19980||AT2G19970 | allergen V5/Tpx-1-related family protein||pathogenesis-related protein, putative||PR-1-LIKE; PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE) | GO:0005576|extracellular region;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA399:rna-TAV2_LOCUS11816,rna-TAV2_LOCUS11813,rna-TAV2_LOCUS11812 | AT2G16990||AT2G16970 | tetracycline transporter||MEE15; MEE15 (maternal effect embryo arrest 15); tetracycline transporter | GO:0009793|embryonic development ending in seed dormancy;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0008493|tetracycline transporter activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA400:rna-TAV2_LOCUS8805,rna-TAV2_LOCUS8753,rna-TAV2_LOCUS8755 | AT5G03390||AT1G68960 | unknown protein | GO:0009507|chloroplast;GO:0005739|mitochondrion;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA402:rna-TAV2_LOCUS8865,rna-TAV2_LOCUS8867,rna-TAV2_LOCUS8868 | AT3G05770 | unknown protein | GO:0048868|pollen tube development;GO:0005575|cellular_component | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA407:rna-TAV2_LOCUS9319,rna-TAV2_LOCUS9313,rna-TAV2_LOCUS11252 | AT2G19410 | protein kinase family protein | GO:0016567|protein ubiquitination;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0004842|ubiquitin-protein ligase activity;GO:0005524|ATP binding;GO:0006468|protein amino acid phosphorylation;GO:0000151|ubiquitin ligase complex;GO:0004672|protein kinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA408:rna-TAV2_LOCUS9665,rna-TAV2_LOCUS9666,rna-TAV2_LOCUS9663 | AT2G18680||AT2G18690 | unknown protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA409:rna-TAV2_LOCUS9691,rna-TAV2_LOCUS11589,rna-TAV2_LOCUS11588 | AT3G19420||AT3G19400||AT3G19390 | cysteine proteinase, putative||ATPEN2; ATPEN2 (ARABIDOPSIS THALIANA PTEN 2); phosphatase/ protein tyrosine phosphatase||cysteine proteinase, putative / thiol protease, putative | GO:0004725|protein tyrosine phosphatase activity;GO:0016791|phosphatase activity;GO:0016311|dephosphorylation;GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA410:rna-TAV2_LOCUS9794,rna-TAV2_LOCUS9793,rna-TAV2_LOCUS10180 | AT3G23600||AT3G23570 | dienelactone hydrolase family protein | GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0005575|cellular_component;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0016787|hydrolase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA411:rna-TAV2_LOCUS9995,rna-TAV2_LOCUS9992,rna-TAV2_LOCUS9993 | AT5G48670||AT2G28700||AT3G05860 | MADS-box protein (AGL45)||AGL46; AGL46 (AGAMOUS-LIKE 46); DNA binding / transcription factor||FEM111, AGL80; AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA412:rna-TAV2_LOCUS12339,rna-TAV2_LOCUS12343,rna-TAV2_LOCUS12340 | AT2G29200 | APUM1; APUM1 (Arabidopsis Pumilio 1); RNA binding / binding | GO:0005575|cellular_component;GO:0005488|binding;GO:0003723|RNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA413:rna-TAV2_LOCUS12418,rna-TAV2_LOCUS13174,rna-TAV2_LOCUS13173 | AT2G04810||AT2G33200 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA415:rna-TAV2_LOCUS12431,rna-TAV2_LOCUS12434,rna-TAV2_LOCUS12433 | AT2G22770||AT2G22760||AT2G22750 | NAI1; NAI1; DNA binding / transcription factor||basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA416:rna-TAV2_LOCUS12587,rna-TAV2_LOCUS14785,rna-TAV2_LOCUS13626 | AT2G38430 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA417:rna-TAV2_LOCUS12611,rna-TAV2_LOCUS12610,rna-TAV2_LOCUS12608 | AT2G28180 | ATCHX8, CHX8, CHX08; ATCHX8; monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0015385|sodium:hydrogen antiporter activity;GO:0005739|mitochondrion;GO:0005451|monovalent cation:hydrogen antiporter activity;GO:0006812|cation transport | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA422:rna-TAV2_LOCUS13029,rna-TAV2_LOCUS13030,rna-TAV2_LOCUS13031 | AT2G28010||AT2G28040 | aspartyl protease family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA423:rna-TAV2_LOCUS13062,rna-TAV2_LOCUS13060,rna-TAV2_LOCUS13604 | AT2G22520 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA424:rna-TAV2_LOCUS13063,rna-TAV2_LOCUS13061,rna-TAV2_LOCUS14821 | AT2G22510 | hydroxyproline-rich glycoprotein family protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA427:rna-TAV2_LOCUS13311,rna-TAV2_LOCUS13312,rna-TAV2_LOCUS13313 | AT1G47317 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA428:rna-TAV2_LOCUS13336,rna-TAV2_LOCUS13330,rna-TAV2_LOCUS13333 | AT5G31412 | protein dimerization | GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA429:rna-TAV2_LOCUS13367,rna-TAV2_LOCUS13779,rna-TAV2_LOCUS15029 | AT2G28105||AT2G28100 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); Has 12 Blast hits to 12 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||ATFUC1; ATFUC1 (alpha-L-fucosidase 1); alpha-L-fucosidase | GO:0005773|vacuole;GO:0004560|alpha-L-fucosidase activity;GO:0003674|molecular_function;GO:0006516|glycoprotein catabolic process;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA432:rna-TAV2_LOCUS13767,rna-TAV2_LOCUS12810,rna-TAV2_LOCUS12808 | AT4G03170||AT1G20600||AT4G03160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G03170.1); Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 13; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).||DNA binding||DNA-binding protein-related | GO:0003674|molecular_function;GO:0016020|membrane;GO:0006355|regulation of transcription, DNA-dependent;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0003677|DNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA433:rna-TAV2_LOCUS13919,rna-TAV2_LOCUS13922,rna-TAV2_LOCUS13921 | - | - | - | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA435:rna-TAV2_LOCUS14001,rna-TAV2_LOCUS14000,rna-TAV2_LOCUS13999 | AT2G39530||AT2G39518 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: integral membrane protein, putative (TAIR:AT2G39530.1); Has 80 Blast hits to 80 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||integral membrane protein, putative | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA437:rna-TAV2_LOCUS14100,rna-TAV2_LOCUS14103,rna-TAV2_LOCUS14105 | AT2G24850 | TAT3, TAT; TAT3 (TYROSINE AMINOTRANSFERASE 3); L-tyrosine:2-oxoglutarate aminotransferase/ transaminase | GO:0004838|L-tyrosine:2-oxoglutarate aminotransferase activity;GO:0008483|transaminase activity;GO:0005575|cellular_component;GO:0009753|response to jasmonic acid stimulus;GO:0009058|biosynthetic process;GO:0009611|response to wounding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA438:rna-TAV2_LOCUS14273,rna-TAV2_LOCUS14270,rna-TAV2_LOCUS14269 | AT2G23260||AT2G23250 | UGT84B2; UGT84B2 (UDP-glucosyl transferase 84B2); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups||UGT84B1; UGT84B1 (UDP-glucosyl transferase 84B1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ indole-3-acetate beta-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0047215|indole-3-acetate beta-glucosyltransferase activity;GO:0008194|UDP-glycosyltransferase activity;GO:0010294|abscisic acid glucosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA439:rna-TAV2_LOCUS14294,rna-TAV2_LOCUS14287,rna-TAV2_LOCUS14288 | AT2G42530||AT2G42540 | COR15B; COR15B (COLD REGULATED 15B)||COR15A, COR15; COR15A (COLD-REGULATED 15A) | GO:0050826|response to freezing;GO:0003674|molecular_function;GO:0006970|response to osmotic stress;GO:0009941|chloroplast envelope;GO:0010017|red or far-red light signaling pathway;GO:0009631|cold acclimation;GO:0009409|response to cold;GO:0009570|chloroplast stroma;GO:0050832|defense response to fungus;GO:0009507|chloroplast | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA444:rna-TAV2_LOCUS14690,rna-TAV2_LOCUS14686,rna-TAV2_LOCUS14684 | AT4G39730||AT2G22170 | lipid-associated family protein | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0009579|thylakoid;GO:0008150|biological_process;GO:0009507|chloroplast | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA446:rna-TAV2_LOCUS14766,rna-TAV2_LOCUS13010,rna-TAV2_LOCUS13008 | AT3G01322||AT3G01323 | Encodes a ECA1 gametogenesis related family protein||unknown protein | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA449:rna-TAV2_LOCUS15191,rna-TAV2_LOCUS15192,rna-TAV2_LOCUS15189 | AT3G60450||AT3G60440||AT3G60415 | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60440.1); Has 187 Blast hits to 185 proteins in 74 species: Archae - 0; Bacteria - 51; Metazoa - 14; Fungi - 36; Plants - 35; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).||||LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoglycerate mutase (InterPro:IPR013078), PRIB5 (InterPro:IPR012398); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G60450.1); Has 180 Blast hits to 178 proteins in 74 species: Archae - 0; Bacteria - 37; Metazoa - 8; Fungi - 48; Plants - 35; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | ;GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA451:rna-TAV2_LOCUS15696,rna-TAV2_LOCUS15694,rna-TAV2_LOCUS15699 | AT1G66210||AT1G66220 | subtilase family protein | GO:0043086|negative regulation of catalytic activity;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0042802|identical protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA454:rna-TAV2_LOCUS15821,rna-TAV2_LOCUS15820,rna-TAV2_LOCUS15454 | AT3G57030||AT3G57010||AT3G57020 | strictosidine synthase family protein | GO:0005773|vacuole;GO:0016844|strictosidine synthase activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0009821|alkaloid biosynthetic process;GO:0005783|endoplasmic reticulum;GO:0009058|biosynthetic process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA455:rna-TAV2_LOCUS15899,rna-TAV2_LOCUS15904,rna-TAV2_LOCUS15905 | AT3G22080||AT1G69660 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA456:rna-TAV2_LOCUS15915,rna-TAV2_LOCUS16538,rna-TAV2_LOCUS15912 | AT1G72125||AT1G72130 | transporter||proton-dependent oligopeptide transport (POT) family protein | GO:0006857|oligopeptide transport;GO:0005215|transporter activity;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA457:rna-TAV2_LOCUS16070,rna-TAV2_LOCUS16687,rna-TAV2_LOCUS18013 | AT1G80960 | F-box protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA458:rna-TAV2_LOCUS16146,rna-TAV2_LOCUS15185,rna-TAV2_LOCUS15186 | AT1G65130||AT1G65140||AT1G65200 | ubiquitin thiolesterase||ubiquitin carboxyl-terminal hydrolase-related | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0004221|ubiquitin thiolesterase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA459:rna-TAV2_LOCUS16149,rna-TAV2_LOCUS15277,rna-TAV2_LOCUS16508 | AT3G53080||AT3G53075||AT3G53050 | galactose-binding lectin family protein||beta-galactosidase/ sugar binding | GO:0005990|lactose catabolic process;GO:0005529|sugar binding;GO:0009341|beta-galactosidase complex;GO:0019513|lactose catabolic process, using glucoside 3-dehydrogenase;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004565|beta-galactosidase activity;GO:0019515|lactose catabolic process via UDP-galactose | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA461:rna-TAV2_LOCUS16530,rna-TAV2_LOCUS16529,rna-TAV2_LOCUS16531 | AT3G47360 | AtHSD3; AtHSD3 (hydroxysteroid dehydrogenase 3); binding / catalytic/ oxidoreductase | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA463:rna-TAV2_LOCUS16800,rna-TAV2_LOCUS16805,rna-TAV2_LOCUS16804 | AT1G58270||AT3G20370 | ZW9; ZW9||meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA464:rna-TAV2_LOCUS16815,rna-TAV2_LOCUS16813,rna-TAV2_LOCUS16812 | AT3G45680||AT3G45650 | NAXT1; NAXT1 (NITRATE EXCRETION TRANSPORTER1); nitrate efflux transmembrane transporter/ transporter||proton-dependent oligopeptide transport (POT) family protein | GO:0010542|nitrate efflux transmembrane transporter activity;GO:0016020|membrane;GO:0015706|nitrate transport;GO:0010447|response to acidity;GO:0006857|oligopeptide transport;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0009624|response to nematode | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA465:rna-TAV2_LOCUS16850,rna-TAV2_LOCUS16851,rna-TAV2_LOCUS16855 | AT3G52680||AT3G51530||AT4G00160 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA466:rna-TAV2_LOCUS17067,rna-TAV2_LOCUS17068,rna-TAV2_LOCUS17069 | AT3G46340||AT3G46350||AT3G46330 | leucine-rich repeat protein kinase, putative||MEE39; MEE39 (maternal effect embryo arrest 39); kinase | GO:0009793|embryonic development ending in seed dormancy;GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA467:rna-TAV2_LOCUS17158,rna-TAV2_LOCUS17157,rna-TAV2_LOCUS17850 | AT1G66120||AT1G65880||AT1G65890 | BZO1; BZO1 (BENZOYLOXYGLUCOSINOLATE 1); benzoate-CoA ligase||acyl-activating enzyme 11 (AAE11)||AAE12; AAE12 (ACYL ACTIVATING ENZYME 12); catalytic | GO:0005777|peroxisome;GO:0003824|catalytic activity;GO:0019761|glucosinolate biosynthetic process;GO:0008152|metabolic process;GO:0018858|benzoate-CoA ligase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA469:rna-TAV2_LOCUS17257,rna-TAV2_LOCUS17256,rna-TAV2_LOCUS17259 | AT3G49480||AT1G67630 | POLA2; POLA2 (DNA POLYMERASE ALPHA 2); DNA binding / DNA-directed DNA polymerase||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G05080.1); Has 443 Blast hits to 431 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 441; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0006260|DNA replication;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0003677|DNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA470:rna-TAV2_LOCUS17289,rna-TAV2_LOCUS17291,rna-TAV2_LOCUS17285 | AT3G50300||AT3G50280||AT3G50270 | transferase family protein | GO:0016740|transferase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA471:rna-TAV2_LOCUS17356,rna-TAV2_LOCUS17357,rna-TAV2_LOCUS17354 | AT2G14060||AT5G38020 | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0006633|fatty acid biosynthetic process;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0005575|cellular_component;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA472:rna-TAV2_LOCUS17361,rna-TAV2_LOCUS17358,rna-TAV2_LOCUS17359 | AT3G50940||AT3G50930 | BCS1; BCS1 (CYTOCHROME BC1 SYNTHESIS); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0000166|nucleotide binding;GO:0005739|mitochondrion | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA475:rna-TAV2_LOCUS17613,rna-TAV2_LOCUS15411,rna-TAV2_LOCUS15412 | AT1G75280||AT1G75290 | oxidoreductase, acting on NADH or NADPH||isoflavone reductase, putative | GO:0006808|regulation of nitrogen utilization;GO:0005488|binding;GO:0046686|response to cadmium ion;GO:0003824|catalytic activity;GO:0016651|oxidoreductase activity, acting on NADH or NADPH;GO:0005886|plasma membrane;GO:0016564|transcription repressor activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0006979|response to oxidative stress | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA476:rna-TAV2_LOCUS17788,rna-TAV2_LOCUS17789,rna-TAV2_LOCUS17790 | AT3G47000||AT3G47050||AT3G47040 | glycosyl hydrolase family 3 protein | GO:0005773|vacuole;GO:0005575|cellular_component;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA477:rna-TAV2_LOCUS17820,rna-TAV2_LOCUS17821,rna-TAV2_LOCUS17812 | AT3G57270||AT3G57260||AT3G57240 | BG1; BG1 (BETA-1,3-GLUCANASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BG3; BG3 (BETA-1,3-GLUCANASE 3); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds||BGL2, PR2, BG2, PR-2; BGL2 (BETA-1,3-GLUCANASE 2); cellulase/ glucan 1,3-beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0005773|vacuole;GO:0008810|cellulase activity;GO:0003824|catalytic activity;GO:0004338|glucan 1,3-beta-glucosidase activity;GO:0005515|protein binding;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0005618|cell wall;GO:0009409|response to cold;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009617|response to bacterium;GO:0043169|cation binding;GO:0009627|systemic acquired resistance | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA478:rna-TAV2_LOCUS17839,rna-TAV2_LOCUS17840,rna-TAV2_LOCUS17837 | AT1G17800 | plastocyanin-like domain-containing protein | GO:0012505|endomembrane system;GO:0005507|copper ion binding;GO:0009055|electron carrier activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA480:rna-TAV2_LOCUS17964,rna-TAV2_LOCUS17965,rna-TAV2_LOCUS17966 | AT3G45220||AT2G25240 | serpin, putative / serine protease inhibitor, putative||serine-type endopeptidase inhibitor | GO:0004867|serine-type endopeptidase inhibitor activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA483:rna-TAV2_LOCUS18477,rna-TAV2_LOCUS18478,rna-TAV2_LOCUS21947 | AT5G52460 | EDA41; EDA41 (embryo sac development arrest 41) | GO:0010197|polar nucleus fusion;GO:0005575|cellular_component | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA485:rna-TAV2_LOCUS18691,rna-TAV2_LOCUS18686,rna-TAV2_LOCUS21155 | AT5G55460||AT5G55450||AT5G55410 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA487:rna-TAV2_LOCUS18764,rna-TAV2_LOCUS18765,rna-TAV2_LOCUS18762 | AT5G01540||AT5G01550||AT5G01560 | LECRKA4.3; LECRKA4.3 (LECTIN RECEPTOR KINASE A4.3); kinase||LECRKA4.1; LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1); kinase||LECRKA4.2; LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ sugar binding | GO:0009737|response to abscisic acid stimulus;GO:0016301|kinase activity;GO:0005529|sugar binding;GO:0009738|abscisic acid mediated signaling pathway;GO:0004674|protein serine/threonine kinase activity;GO:0009845|seed germination;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006499|N-terminal protein myristoylation;GO:0004672|protein kinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA489:rna-TAV2_LOCUS18995,rna-TAV2_LOCUS20027,rna-TAV2_LOCUS20026 | AT5G11210||AT5G11180 | ATGLR2.6, GLR2.6; ATGLR2.6; intracellular ligand-gated ion channel||ATGLR2.5, GLR2.5; ATGLR2.5; intracellular ligand-gated ion channel | GO:0006874|cellular calcium ion homeostasis;GO:0016020|membrane;GO:0005217|intracellular ligand-gated ion channel activity;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0009416|response to light stimulus | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA490:rna-TAV2_LOCUS19006,rna-TAV2_LOCUS19007,rna-TAV2_LOCUS19012 | AT5G19890||AT5G19880 | peroxidase, putative | GO:0009615|response to virus;GO:0009723|response to ethylene stimulus;GO:0005737|cytoplasm;GO:0009055|electron carrier activity;GO:0012505|endomembrane system;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0006499|N-terminal protein myristoylation;GO:0005634|nucleus;GO:0006979|response to oxidative stress | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA491:rna-TAV2_LOCUS19140,rna-TAV2_LOCUS19142,rna-TAV2_LOCUS19144 | AT4G00893 | LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12370.1); Has 133 Blast hits to 128 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0009507|chloroplast | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA492:rna-TAV2_LOCUS19284,rna-TAV2_LOCUS19285,rna-TAV2_LOCUS21774 | AT1G63190 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63200.1); Has 24 Blast hits to 24 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA493:rna-TAV2_LOCUS19309,rna-TAV2_LOCUS19311,rna-TAV2_LOCUS19313 | AT4G04090||AT2G40450 | speckle-type POZ protein-related | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA495:rna-TAV2_LOCUS19450,rna-TAV2_LOCUS19451,rna-TAV2_LOCUS19452 | AT5G17760||AT3G29800||AT5G17740 | AAA-type ATPase family||AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0000166|nucleotide binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA496:rna-TAV2_LOCUS19460,rna-TAV2_LOCUS20864,rna-TAV2_LOCUS20865 | AT3G43837 | - | - | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA497:rna-TAV2_LOCUS19611,rna-TAV2_LOCUS19277,rna-TAV2_LOCUS19278 | AT5G18320 | armadillo/beta-catenin repeat family protein / U-box domain-containing protein | GO:0000151|ubiquitin ligase complex;GO:0005488|binding;GO:0016567|protein ubiquitination;GO:0004842|ubiquitin-protein ligase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA498:rna-TAV2_LOCUS19659,rna-TAV2_LOCUS20103,rna-TAV2_LOCUS20104 | AT5G52880 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA499:rna-TAV2_LOCUS19668,rna-TAV2_LOCUS21173,rna-TAV2_LOCUS21174 | AT5G54150 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA502:rna-TAV2_LOCUS19738,rna-TAV2_LOCUS19737,rna-TAV2_LOCUS19736 | AT5G15660||AT4G11590 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA503:rna-TAV2_LOCUS19867,rna-TAV2_LOCUS20294,rna-TAV2_LOCUS20293 | AT5G50770||AT5G50600||AT5G50590 | AtHSD4; AtHSD4 (hydroxysteroid dehydrogenase 4); binding / catalytic/ oxidoreductase||AtHSD1; AtHSD1 (hydroxysteroid dehydrogenase 1); binding / catalytic/ oxidoreductase||AtHSD6; AtHSD6 (hydroxysteroid dehydrogenase 6); binding / catalytic/ oxidoreductase | GO:0009741|response to brassinosteroid stimulus;GO:0009737|response to abscisic acid stimulus;GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0008152|metabolic process;GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA505:rna-TAV2_LOCUS20299,rna-TAV2_LOCUS20300,rna-TAV2_LOCUS20301 | AT5G56810||AT5G56420 | F-box family protein | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA507:rna-TAV2_LOCUS20482,rna-TAV2_LOCUS20474,rna-TAV2_LOCUS21926 | AT2G20605 | Encodes a Plant thionin family protein | GO:0012505|endomembrane system | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA509:rna-TAV2_LOCUS20645,rna-TAV2_LOCUS20652,rna-TAV2_LOCUS20651 | AT5G58784||AT5G58780||AT5G58770 | dehydrodolichyl diphosphate synthase||dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative | GO:0009507|chloroplast;GO:0012505|endomembrane system;GO:0045547|dehydrodolichyl diphosphate synthase activity;GO:0019408|dolichol biosynthetic process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA510:rna-TAV2_LOCUS20730,rna-TAV2_LOCUS19415,rna-TAV2_LOCUS19414 | AT4G05120||AT4G05140 | ENT3, FUR1, ATENT3; FUR1 (FUDR RESISTANT 1); nucleoside transmembrane transporter||equilibrative nucleoside transporter family protein | GO:0005886|plasma membrane;GO:0006810|transport;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA511:rna-TAV2_LOCUS21040,rna-TAV2_LOCUS21041,rna-TAV2_LOCUS21046 | AT5G58700||AT5G58690||AT5G58670 | ATPLC1, ATPLC, PLC1; PLC1 (PHOSPHOLIPASE C 1); phospholipase C||ATPLC5, PLC5; phosphoinositide-specific phospholipase C family protein||ATPLC4, PLC4; phosphoinositide-specific phospholipase C family protein | GO:0009737|response to abscisic acid stimulus;GO:0004435|phosphoinositide phospholipase C activity;GO:0009738|abscisic acid mediated signaling pathway;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0005509|calcium ion binding;GO:0009409|response to cold;GO:0004629|phospholipase C activity;GO:0006629|lipid metabolic process;GO:0005575|cellular_component;GO:0009414|response to water deprivation;GO:0009651|response to salt stress;GO:0008081|phosphoric diester hydrolase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA513:rna-TAV2_LOCUS21092,rna-TAV2_LOCUS21085,rna-TAV2_LOCUS18624 | AT5G17110||AT5G17120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17150.1); Has 47 Blast hits to 45 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17100.1); Has 34 Blast hits to 32 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA514:rna-TAV2_LOCUS21111,rna-TAV2_LOCUS21110,rna-TAV2_LOCUS21113 | AT1G49360 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA515:rna-TAV2_LOCUS21196,rna-TAV2_LOCUS20181,rna-TAV2_LOCUS20768 | AT5G01950||AT5G37450 | ATP binding / kinase/ protein serine/threonine kinase||leucine-rich repeat transmembrane protein kinase, putative | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA517:rna-TAV2_LOCUS21317,rna-TAV2_LOCUS21318,rna-TAV2_LOCUS21314 | AT1G65630||AT1G65640||AT5G36950 | DegP4; DegP4 (DegP protease 4); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase||DegP10; DegP10 (DegP protease 10); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase||DegP3; DegP3 (DegP protease 3); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | GO:0005515|protein binding;GO:0003824|catalytic activity;GO:0008236|serine-type peptidase activity;GO:0004252|serine-type endopeptidase activity;GO:0006508|proteolysis;GO:0005739|mitochondrion | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA519:rna-TAV2_LOCUS21574,rna-TAV2_LOCUS21573,rna-TAV2_LOCUS21572 | AT4G22970 | AESP; AESP (ARABIDOPSIS HOMOLOG OF SEPARASE); peptidase | GO:0045876|positive regulation of sister chromatid cohesion;GO:0051304|chromosome separation;GO:0009826|unidimensional cell growth;GO:0051307|meiotic chromosome separation;GO:0009793|embryonic development ending in seed dormancy;GO:0008233|peptidase activity;GO:0005634|nucleus;GO:0009960|endosperm development | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA521:rna-TAV2_LOCUS21826,rna-TAV2_LOCUS20349,rna-TAV2_LOCUS20350 | AT5G07540||AT5G07530 | GRP16, ATGRP16, ATGRP-6; GRP16 (GLYCINE-RICH PROTEIN 16); lipid binding / nutrient reservoir||GRP17, ATGRP17, ATGRP-7; GRP17 (GLYCINE RICH PROTEIN 17); lipid binding | GO:0005576|extracellular region;GO:0019915|lipid storage;GO:0016020|membrane;GO:0008289|lipid binding;GO:0031012|extracellular matrix;GO:0019953|sexual reproduction;GO:0009859|pollen hydration;GO:0045735|nutrient reservoir activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA522:rna-TAV2_LOCUS21832,rna-TAV2_LOCUS21831,rna-TAV2_LOCUS21833 | AT5G07850||AT5G07860||AT5G07870 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA528:rna-TAV2_LOCUS22155,rna-TAV2_LOCUS22154,rna-TAV2_LOCUS22157 | AT4G03370||AT4G05230||AT4G02940 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||ubiquitin family protein | GO:0016491|oxidoreductase activity;GO:0003674|molecular_function;GO:0006464|protein modification process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA529:rna-TAV2_LOCUS22175,rna-TAV2_LOCUS20830,rna-TAV2_LOCUS22176 | AT5G06730||AT5G06720 | peroxidase, putative | GO:0005886|plasma membrane;GO:0009055|electron carrier activity;GO:0012505|endomembrane system;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0006979|response to oxidative stress | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA532:rna-TAV2_LOCUS22605,rna-TAV2_LOCUS23181,rna-TAV2_LOCUS23099 | AT5G38210||AT5G38260 | serine/threonine protein kinase family protein||serine/threonine protein kinase, putative | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA533:rna-TAV2_LOCUS22660,rna-TAV2_LOCUS22659,rna-TAV2_LOCUS22658 | AT4G29270||AT4G29260 | acid phosphatase class B family protein | GO:0005773|vacuole;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0003993|acid phosphatase activity;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA534:rna-TAV2_LOCUS22682,rna-TAV2_LOCUS23208,rna-TAV2_LOCUS23216 | AT5G45220 | Toll-Interleukin-Resistance (TIR) domain-containing protein | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0007165|signal transduction;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA535:rna-TAV2_LOCUS22754,rna-TAV2_LOCUS22755,rna-TAV2_LOCUS22750 | AT4G21910 | MATE efflux family protein | GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0005215|transporter activity;GO:0015297|antiporter activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA537:rna-TAV2_LOCUS22809,rna-TAV2_LOCUS22808,rna-TAV2_LOCUS24186 | AT4G18370||AT3G05370 | AtRLP31; AtRLP31 (Receptor Like Protein 31); kinase/ protein binding||DEG5, DEGP5, HHOA; DEG5 (DEGP PROTEASE 5); catalytic/ serine-type endopeptidase/ serine-type peptidase | GO:0010206|photosystem II repair;GO:0003824|catalytic activity;GO:0008236|serine-type peptidase activity;GO:0009543|chloroplast thylakoid lumen;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0006508|proteolysis;GO:0031977|thylakoid lumen | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA538:rna-TAV2_LOCUS22830,rna-TAV2_LOCUS22831,rna-TAV2_LOCUS22832 | AT4G27030||AT2G22890 | small conjugating protein ligase | GO:0006636|unsaturated fatty acid biosynthetic process;GO:0019787|small conjugating protein ligase activity;GO:0043687|post-translational protein modification;GO:0051246|regulation of protein metabolic process;GO:0009507|chloroplast | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA542:rna-TAV2_LOCUS23173,rna-TAV2_LOCUS23783,rna-TAV2_LOCUS23785 | AT5G40000||AT5G40010 | AATP1; AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0000166|nucleotide binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA543:rna-TAV2_LOCUS23358,rna-TAV2_LOCUS23357,rna-TAV2_LOCUS23356 | AT4G23100 | RML1, PAD2, GSH1, CAD2, ATECS1, GSHA; GSH1 (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase | GO:0042742|defense response to bacterium;GO:0052544|callose deposition in cell wall during defense response;GO:0046686|response to cadmium ion;GO:0009908|flower development;GO:0006750|glutathione biosynthetic process;GO:0009700|indole phytoalexin biosynthetic process;GO:0010193|response to ozone;GO:0019761|glucosinolate biosynthetic process;GO:0009816|defense response to bacterium, incompatible interaction;GO:0004357|glutamate-cysteine ligase activity;GO:0009570|chloroplast stroma;GO:0009408|response to heat;GO:0009753|response to jasmonic acid stimulus;GO:0050832|defense response to fungus;GO:0009507|chloroplast;GO:0002213|defense response to insect | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA544:rna-TAV2_LOCUS23415,rna-TAV2_LOCUS23414,rna-TAV2_LOCUS23413 | AT3G62210||AT3G62200||AT3G61090 | EDA32; EDA32 (embryo sac development arrest 32)||unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 3380 Blast hits to 2820 proteins in 272 species: Archae - 0; Bacteria - 93; Metazoa - 1555; Fungi - 720; Plants - 473; Viruses - 42; Other Eukaryotes - 497 (source: NCBI BLink). | GO:0010197|polar nucleus fusion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA546:rna-TAV2_LOCUS23498,rna-TAV2_LOCUS23491,rna-TAV2_LOCUS23492 | AT4G16770||AT4G16765 | iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016491|oxidoreductase activity;GO:0005777|peroxisome;GO:0005506|iron ion binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA547:rna-TAV2_LOCUS23632,rna-TAV2_LOCUS23634,rna-TAV2_LOCUS25858 | AT4G33730||AT4G33710 | pathogenesis-related protein, putative | GO:0005576|extracellular region;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA548:rna-TAV2_LOCUS23725,rna-TAV2_LOCUS23730,rna-TAV2_LOCUS23729 | AT1G66620||AT5G37930 | seven in absentia (SINA) protein, putative||seven in absentia (SINA) family protein | GO:0016567|protein ubiquitination;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0007275|multicellular organismal development;GO:0005634|nucleus | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA556:rna-TAV2_LOCUS24487,rna-TAV2_LOCUS25441,rna-TAV2_LOCUS25469 | AT1G18070 | EF-1-alpha-related GTP-binding protein, putative | GO:0005773|vacuole;GO:0003924|GTPase activity;GO:0005525|GTP binding;GO:0006415|translational termination;GO:0003747|translation release factor activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA557:rna-TAV2_LOCUS24533,rna-TAV2_LOCUS25916,rna-TAV2_LOCUS25917 | AT4G23600||AT4G23590 | CORI3, JR2; CORI3 (CORONATINE INDUCED 1); cystathionine beta-lyase/ transaminase||aminotransferase class I and II family protein | GO:0005773|vacuole;GO:0009737|response to abscisic acid stimulus;GO:0016769|transferase activity, transferring nitrogenous groups;GO:0042538|hyperosmotic salinity response;GO:0008483|transaminase activity;GO:0003824|catalytic activity;GO:0006519|cellular amino acid and derivative metabolic process;GO:0030170|pyridoxal phosphate binding;GO:0006520|cellular amino acid metabolic process;GO:0048046|apoplast;GO:0010188|response to microbial phytotoxin;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0005575|cellular_component;GO:0009753|response to jasmonic acid stimulus;GO:0009058|biosynthetic process;GO:0009611|response to wounding;GO:0004121|cystathionine beta-lyase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA559:rna-TAV2_LOCUS24542,rna-TAV2_LOCUS24853,rna-TAV2_LOCUS24852 | AT4G39000||AT4G39010 | AtGH9B18; AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds||AtGH9B17; AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0003824|catalytic activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA561:rna-TAV2_LOCUS24703,rna-TAV2_LOCUS24705,rna-TAV2_LOCUS24706 | AT1G22090||AT4G11700 | emb2204; emb2204 (embryo defective 2204)||unknown protein | GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA562:rna-TAV2_LOCUS24721,rna-TAV2_LOCUS26031,rna-TAV2_LOCUS26033 | AT4G18690||AT5G45830 | DOG1, GSQ5; DOG1 (DELAY OF GERMINATION 1)||unknown protein | GO:0010182|sugar mediated signaling pathway;GO:0003674|molecular_function;GO:0009738|abscisic acid mediated signaling pathway;GO:0010162|seed dormancy;GO:0005575|cellular_component;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA567:rna-TAV2_LOCUS25041,rna-TAV2_LOCUS23315,rna-TAV2_LOCUS23318 | AT2G14080 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA568:rna-TAV2_LOCUS25065,rna-TAV2_LOCUS25071,rna-TAV2_LOCUS25067 | AT2G04620 | cation efflux family protein | GO:0015562|efflux transmembrane transporter activity;GO:0006812|cation transport;GO:0008324|cation transmembrane transporter activity;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA569:rna-TAV2_LOCUS25073,rna-TAV2_LOCUS25069,rna-TAV2_LOCUS24178 | AT1G63730||AT5G49140||AT1G65850 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA570:rna-TAV2_LOCUS25172,rna-TAV2_LOCUS25168,rna-TAV2_LOCUS25169 | AT2G30580 | DRIP2; DRIP2 (DREB2A-INTERACTING PROTEIN 2); protein binding / ubiquitin-protein ligase/ zinc ion binding | GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0009414|response to water deprivation;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA572:rna-TAV2_LOCUS25233,rna-TAV2_LOCUS25240,rna-TAV2_LOCUS25238 | AT4G35720||AT4G35690 | unknown protein | ;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA573:rna-TAV2_LOCUS25252,rna-TAV2_LOCUS25245,rna-TAV2_LOCUS22915 | AT4G22600 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA574:rna-TAV2_LOCUS25418,rna-TAV2_LOCUS25417,rna-TAV2_LOCUS25415 | AT4G19090||AT5G45540||AT4G19080 | unknown protein | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA575:rna-TAV2_LOCUS25526,rna-TAV2_LOCUS23238,rna-TAV2_LOCUS23239 | AT4G18250||AT4G18253 | ||receptor serine/threonine kinase, putative | ;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004675|transmembrane receptor protein serine/threonine kinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA576:rna-TAV2_LOCUS25566,rna-TAV2_LOCUS25554,rna-TAV2_LOCUS23326 | AT1G67390||AT3G60790 | F-box family protein||F-box protein-related | GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA578:rna-TAV2_LOCUS25611,rna-TAV2_LOCUS23021,rna-TAV2_LOCUS25610 | AT5G37200 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0016757|transferase activity, transferring glycosyl groups;GO:0003700|transcription factor activity;GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA580:rna-TAV2_LOCUS25832,rna-TAV2_LOCUS24285,rna-TAV2_LOCUS24507 | AT3G06520 | agenet domain-containing protein | GO:0005575|cellular_component;GO:0003723|RNA binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA582:rna-TAV2_LOCUS25961,rna-TAV2_LOCUS25958,rna-TAV2_LOCUS23682 | AT4G19810 | glycosyl hydrolase family 18 protein | GO:0003824|catalytic activity;GO:0005618|cell wall;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding;GO:0004568|chitinase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA583:rna-TAV2_LOCUS26075,rna-TAV2_LOCUS26023,rna-TAV2_LOCUS25742 | AT4G12950||AT1G30800||AT4G29980 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29980.1); Has 38 Blast hits to 38 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).||unknown protein||FUNCTIONS IN: molecular_function unknown; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29980.1); Has 31 Blast hits to 31 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0031225|anchored to membrane;GO:0003674|molecular_function | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA584:rna-TAV2_LOCUS4623,rna-TAV2_LOCUS4622,rna-TAV2_LOCUS4621 | AT3G45140 | LOX2, ATLOX2; LOX2 (LIPOXYGENASE 2); lipoxygenase | GO:0009535|chloroplast thylakoid membrane;GO:0009941|chloroplast envelope;GO:0051707|response to other organism;GO:0009570|chloroplast stroma;GO:0009414|response to water deprivation;GO:0009753|response to jasmonic acid stimulus;GO:0009620|response to fungus;GO:0009507|chloroplast;GO:0009695|jasmonic acid biosynthetic process;GO:0009611|response to wounding;GO:0016165|lipoxygenase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA585:rna-TAV2_LOCUS4772,rna-TAV2_LOCUS4773,rna-TAV2_LOCUS4770 | AT2G45180 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0008289|lipid binding;GO:0006869|lipid transport;GO:0009535|chloroplast thylakoid membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA586:rna-TAV2_LOCUS4779,rna-TAV2_LOCUS4780,rna-TAV2_LOCUS4782 | AT4G04960 | lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA587:rna-TAV2_LOCUS4914,rna-TAV2_LOCUS4912,rna-TAV2_LOCUS4913 | AT3G17380 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA589:rna-TAV2_LOCUS8181,rna-TAV2_LOCUS8180,rna-TAV2_LOCUS8183 | AT1G55790 | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | GO:0006412|translation;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0006432|phenylalanyl-tRNA aminoacylation;GO:0000166|nucleotide binding;GO:0004826|phenylalanine-tRNA ligase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA590:rna-TAV2_LOCUS8253,rna-TAV2_LOCUS8256,rna-TAV2_LOCUS8255 | AT5G24090 | acidic endochitinase (CHIB1) | GO:0003824|catalytic activity;GO:0042631|cellular response to water deprivation;GO:0012505|endomembrane system;GO:0009409|response to cold;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0009651|response to salt stress;GO:0043169|cation binding;GO:0009642|response to light intensity;GO:0009611|response to wounding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA592:rna-TAV2_LOCUS8530,rna-TAV2_LOCUS8529,rna-TAV2_LOCUS8528 | AT5G25610 | RD22; RD22; nutrient reservoir | GO:0009737|response to abscisic acid stimulus;GO:0009269|response to desiccation;GO:0012505|endomembrane system;GO:0009651|response to salt stress;GO:0045735|nutrient reservoir activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA594:rna-TAV2_LOCUS8557,rna-TAV2_LOCUS8559,rna-TAV2_LOCUS8558 | AT5G52390 | photoassimilate-responsive protein, putative | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA597:rna-TAV2_LOCUS8722,rna-TAV2_LOCUS8721,rna-TAV2_LOCUS8720 | AT1G64940 | CYP89A6; CYP89A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA598:rna-TAV2_LOCUS4238,rna-TAV2_LOCUS4239,rna-TAV2_LOCUS4240 | AT5G64700 | nodulin MtN21 family protein | GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA599:rna-TAV2_LOCUS11962,rna-TAV2_LOCUS11963,rna-TAV2_LOCUS11964 | AT2G37710 | RLK; RLK (receptor lectin kinase); kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0009751|response to salicylic acid stimulus | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA603:rna-TAV2_LOCUS18307,rna-TAV2_LOCUS18308,rna-TAV2_LOCUS18309 | AT3G14850 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA605:rna-TAV2_LOCUS18418,rna-TAV2_LOCUS18417,rna-TAV2_LOCUS18416 | AT1G03670 | ankyrin repeat family protein | GO:0005515|protein binding | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA608:rna-TAV2_LOCUS4392,rna-TAV2_LOCUS4393,rna-TAV2_LOCUS4394 | AT4G18220||AT4G18210 | purine permease family protein||ATPUP10; ATPUP10; purine transmembrane transporter | GO:0005345|purine transmembrane transporter activity;GO:0009624|response to nematode;GO:0006863|purine transport;GO:0016020|membrane | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA611:rna-TAV2_LOCUS4459,rna-TAV2_LOCUS4457,rna-TAV2_LOCUS4461 | AT2G22590||AT5G49690 | transferase, transferring glycosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA612:rna-TAV2_LOCUS4495,rna-TAV2_LOCUS4496,rna-TAV2_LOCUS4493 | AT5G22860 | serine carboxypeptidase S28 family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0008233|peptidase activity;GO:0008236|serine-type peptidase activity | - | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA613:rna-TAV2_LOCUS1004,rna-TAV2_LOCUS1005 | AT1G17020||AT1G17010||AT4G25300 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||SRG1, ATSRG1; SRG1 (SENESCENCE-RELATED GENE 1); oxidoreductase, acting on diphenols and related substances as donors, oxygen as acceptor / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and inc | GO:0016682|oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0016491|oxidoreductase activity;GO:0010260|organ senescence;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009813|flavonoid biosynthetic process;GO:0005575|cellular_component | rna-TAV2_LOCUS25431 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA622:rna-TAV2_LOCUS1233,rna-TAV2_LOCUS1232 | AT1G18710||AT1G74430 | MYB95, ATMYB95, ATMYBCP66; MYB95 (myb domain protein 95); DNA binding / transcription factor||AtMYB47; AtMYB47 (myb domain protein 47); DNA binding / transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005737|cytoplasm;GO:0009753|response to jasmonic acid stimulus;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS16097 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA624:rna-TAV2_LOCUS1291,rna-TAV2_LOCUS3933 | AT1G06090||AT1G06080||AT2G31360 | ADS2; ADS2 (16:0Delta9 Arabidopsis desaturase 2); oxidoreductase||fatty acid desaturase family protein||ADS1; ADS1 (DELTA 9 DESATURASE 1); oxidoreductase | GO:0005575|cellular_component;GO:0016491|oxidoreductase activity;GO:0006629|lipid metabolic process | rna-TAV2_LOCUS14421 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA630:rna-TAV2_LOCUS1413,rna-TAV2_LOCUS1415 | AT1G47210||AT1G47230 | CYCA3;2; cyclin family protein||CYCA3;4; cyclin, putative | GO:0005634|nucleus;GO:0051726|regulation of cell cycle;GO:0016538|cyclin-dependent protein kinase regulator activity;GO:0005737|cytoplasm;GO:0004693|cyclin-dependent protein kinase activity | rna-TAV2_LOCUS21728 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA631:rna-TAV2_LOCUS1453,rna-TAV2_LOCUS1459 | AT1G16980 | ATTPS2, TPS2; ATTPS2; alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups | GO:0003825|alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component;GO:0005992|trehalose biosynthetic process | rna-TAV2_LOCUS1452 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA644:rna-TAV2_LOCUS1832,rna-TAV2_LOCUS1833 | AT4G03728 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS19298 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA646:rna-TAV2_LOCUS1868,rna-TAV2_LOCUS1867 | AT1G10010||AT1G58360 | AAP8, ATAAP8; AAP8; amino acid transmembrane transporter||AAP1, NAT2; AAP1 (AMINO ACID PERMEASE 1); amino acid transmembrane transporter/ neutral amino acid transmembrane transporter | GO:0016020|membrane;GO:0015175|neutral amino acid transmembrane transporter activity;GO:0043090|amino acid import;GO:0006865|amino acid transport;GO:0005886|plasma membrane;GO:0009624|response to nematode;GO:0015804|neutral amino acid transport;GO:0015171|amino acid transmembrane transporter activity | rna-TAV2_LOCUS6444 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA648:rna-TAV2_LOCUS1888,rna-TAV2_LOCUS1887 | AT1G01580||AT1G01590 | FRO2, FRD1, ATFRO2; FRO2 (FERRIC REDUCTION OXIDASE 2); ferric-chelate reductase||FRO1, ATFRO1; FRO1 (FERRIC REDUCTION OXIDASE 1); ferric-chelate reductase | GO:0015688|iron chelate transport;GO:0016020|membrane;GO:0009735|response to cytokinin stimulus;GO:0055072|iron ion homeostasis;GO:0005886|plasma membrane;GO:0009617|response to bacterium;GO:0016021|integral to membrane;GO:0000293|ferric-chelate reductase activity | rna-TAV2_LOCUS19245 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA659:rna-TAV2_LOCUS2151,rna-TAV2_LOCUS2152 | AT3G03826 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS18627 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA665:rna-TAV2_LOCUS2298,rna-TAV2_LOCUS2297 | AT1G13580||AT3G25540 | LAG13; LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)||LAG1; LAG1 | GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005783|endoplasmic reticulum;GO:0006499|N-terminal protein myristoylation;GO:0005794|Golgi apparatus | rna-TAV2_LOCUS5867 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA667:rna-TAV2_LOCUS236,rna-TAV2_LOCUS237 | AT5G06350 | binding | GO:0005488|binding;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS20240 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA670:rna-TAV2_LOCUS2400,rna-TAV2_LOCUS2403 | AT1G33110||AT3G27890 | MATE efflux family protein||NQR; NQR (NADPH:QUINONE OXIDOREDUCTASE); FMN reductase | GO:0042742|defense response to bacterium;GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0006855|drug transmembrane transport;GO:0009651|response to salt stress;GO:0005886|plasma membrane;GO:0008752|FMN reductase activity;GO:0005215|transporter activity;GO:0009570|chloroplast stroma;GO:0015297|antiporter activity;GO:0009507|chloroplast | rna-TAV2_LOCUS8090 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA678:rna-TAV2_LOCUS2496,rna-TAV2_LOCUS2497 | AT1G22430||AT1G22440||AT4G22110 | alcohol dehydrogenase, putative | GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0055114|oxidation reduction;GO:0008270|zinc ion binding;GO:0008152|metabolic process;GO:0005575|cellular_component | rna-TAV2_LOCUS22539 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA695:rna-TAV2_LOCUS3078,rna-TAV2_LOCUS3081 | AT2G07190 | LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Region of unknown function DUF1985 (InterPro:IPR015410); BEST Arabidopsis thaliana protein match is: Ulp1 protease family protein (TAIR:AT5G45570.1); Has 131 Blast hits to 131 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 6; Fungi - 1; Plants - 94; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). | GO:0005575|cellular_component | rna-TAV2_LOCUS14731 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA696:rna-TAV2_LOCUS3088,rna-TAV2_LOCUS1567 | AT1G51460||AT1G51500||AT3G21090 | ABC transporter family protein||CER5, D3, ABCG12, WBC12, ATWBC12; CER5 (ECERIFERUM 5); ATPase, coupled to transmembrane movement of substances | GO:0010025|wax biosynthetic process;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport;GO:0016020|membrane | rna-TAV2_LOCUS11485 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA713:rna-TAV2_LOCUS3441,rna-TAV2_LOCUS1892 | AT1G01540||AT4G01330 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | rna-TAV2_LOCUS22368 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA723:rna-TAV2_LOCUS3711,rna-TAV2_LOCUS118 | AT2G43260||AT2G43270 | F-box family protein||F-box family protein / S locus-related | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS3104 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA751:rna-TAV2_LOCUS892,rna-TAV2_LOCUS2446 | AT1G23820||AT1G70310 | SPDS2; SPDS2 (spermidine synthase 2); spermidine synthase||SPDS1; SPDS1 (spermidine synthase 1); spermidine synthase | GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0004766|spermidine synthase activity;GO:0008295|spermidine biosynthetic process | rna-TAV2_LOCUS15589 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA758:rna-TAV2_LOCUS5006,rna-TAV2_LOCUS5005 | AT1G62660||AT1G12240 | beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar||ATBETAFRUCT4, VAC-INV; ATBETAFRUCT4; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0005773|vacuole;GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0009505|plant-type cell wall;GO:0004564|beta-fructofuranosidase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process | rna-TAV2_LOCUS1527 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA759:rna-TAV2_LOCUS5090,rna-TAV2_LOCUS5088 | AT5G47600 | heat shock protein-related | GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS5103 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA774:rna-TAV2_LOCUS5343,rna-TAV2_LOCUS5344 | AT3G27030 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS25350 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA783:rna-TAV2_LOCUS5660,rna-TAV2_LOCUS5657 | AT5G23370||AT5G08350 | GRAM domain-containing protein / ABA-responsive protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS20566 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA790:rna-TAV2_LOCUS5810,rna-TAV2_LOCUS5816 | AT5G43360||AT3G54700 | PHT3, ATPT4; PHT3 (PHOSPHATE TRANSPORTER 3); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter||carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter | GO:0016020|membrane;GO:0005315|inorganic phosphate transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0006810|transport;GO:0015114|phosphate transmembrane transporter activity;GO:0006817|phosphate transport;GO:0005351|sugar:hydrogen symporter activity | rna-TAV2_LOCUS17755 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA792:rna-TAV2_LOCUS5849,rna-TAV2_LOCUS5179 | AT5G45020||AT5G44990||AT4G19880 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45020.1); Has 1635 Blast hits to 1635 proteins in 489 species: Archae - 12; Bacteria - 905; Metazoa - 23; Fungi - 158; Plants - 57; Viruses - 0; Other Eukaryotes - 480 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19880.1); Has 1632 Blast hits to 1632 proteins in 489 species: Archae - 12; Bacteria - 905; Metazoa - 23; Fungi - 156; Plants - 57; Viruses - 0; Other Eukaryotes - 479 (source: NCBI BLink).||LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19880.1); Has 1632 Blast hits to 1632 proteins in 489 species: Archae - 12; Bacteria - 907; Metazoa - 22; Fungi - 156; Plants - 57; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0046686|response to cadmium ion;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast | rna-TAV2_LOCUS25966 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA801:rna-TAV2_LOCUS6062,rna-TAV2_LOCUS7230 | AT3G26140||AT3G26130||AT1G13130 | glycosyl hydrolase family 5 protein / cellulase family protein | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | rna-TAV2_LOCUS644 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA802:rna-TAV2_LOCUS6079,rna-TAV2_LOCUS6081 | AT2G37710 | RLK; RLK (receptor lectin kinase); kinase | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0009751|response to salicylic acid stimulus | rna-TAV2_LOCUS6080 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA804:rna-TAV2_LOCUS6203,rna-TAV2_LOCUS6206 | AT1G54850||AT1G54840||AT1G08980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54840.1); Has 35 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54850.1); Has 44 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||ATAMI1, AMI1, ATTOC64-I; AMI1 (AMIDASE 1); amidase/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds / indoleacetamide hydrolase | GO:0004040|amidase activity;GO:0016810|hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds;GO:0003674|molecular_function;GO:0009684|indoleacetic acid biosynthetic process;GO:0005730|nucleolus;GO:0005737|cytoplasm;GO:0043864|indoleacetamide hydrolase activity;GO:0005575|cellular_component;GO:0008150|biological_process | rna-TAV2_LOCUS1658 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA813:rna-TAV2_LOCUS6332,rna-TAV2_LOCUS6730 | AT1G60920||AT1G46408 | AGL97; AGL97 (AGAMOUS-LIKE 97); DNA binding / transcription factor||agl55; agl55 (AGAMOUS-LIKE 55); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0006499|N-terminal protein myristoylation;GO:0005634|nucleus;GO:0003677|DNA binding | rna-TAV2_LOCUS7380 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA823:rna-TAV2_LOCUS6620,rna-TAV2_LOCUS5446 | AT2G03040||AT2G03290||AT1G14010 | emp24/gp25L/p24 family protein||transmembrane protein-related||protein transmembrane transporter | GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0006810|transport | rna-TAV2_LOCUS384 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA846:rna-TAV2_LOCUS6963,rna-TAV2_LOCUS6966 | AT5G45620||AT4G19010 | 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein||26S proteasome regulatory subunit, putative (RPN9) | GO:0003674|molecular_function;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0008152|metabolic process;GO:0008541|proteasome regulatory particle, lid subcomplex;GO:0016207|4-coumarate-CoA ligase activity | rna-TAV2_LOCUS25815 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA860:rna-TAV2_LOCUS7167,rna-TAV2_LOCUS7169 | AT2G34690 | ACD11; ACD11 (ACCELERATED CELL DEATH 11); sphingosine transmembrane transporter | GO:0009751|response to salicylic acid stimulus;GO:0010175|sphingosine transmembrane transporter activity;GO:0005737|cytoplasm;GO:0009816|defense response to bacterium, incompatible interaction;GO:0008219|cell death | rna-TAV2_LOCUS14333 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA869:rna-TAV2_LOCUS7413,rna-TAV2_LOCUS7412 | AT5G65710||AT5G65700||AT3G49670 | HSL2; HSL2 (HAESA-Like 2); ATP binding / kinase/ protein serine/threonine kinase||BAM1; BAM1 (BARELY ANY MERISTEM 1); ATP binding / kinase/ protein serine/threonine kinase||BAM2; BAM2 (BARELY ANY MERISTEM 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase | GO:0048229|gametophyte development;GO:0016301|kinase activity;GO:0005515|protein binding;GO:0010075|regulation of meristem growth;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0009934|regulation of meristem structural organization;GO:0048437|floral organ development;GO:0006468|protein amino acid phosphorylation;GO:0048653|anther development;GO:0010480|microsporocyte differentiation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | rna-TAV2_LOCUS15931 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA875:rna-TAV2_LOCUS7541,rna-TAV2_LOCUS7542 | AT1G10950 | endomembrane protein 70, putative | GO:0016021|integral to membrane;GO:0005794|Golgi apparatus;GO:0016020|membrane | rna-TAV2_LOCUS1250 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA881:rna-TAV2_LOCUS7604,rna-TAV2_LOCUS5594 | AT5G45275||AT4G19450 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nodulin-related (TAIR:AT4G19450.1); Has 697 Blast hits to 659 proteins in 149 species: Archae - 19; Bacteria - 126; Metazoa - 5; Fungi - 146; Plants - 324; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).||nodulin-related | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS24094 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA891:rna-TAV2_LOCUS7808,rna-TAV2_LOCUS7810 | AT5G06860||AT5G06870 | PGIP1, ATPGIP1; PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding||PGIP2, ATPGIP2; PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding | GO:0005515|protein binding;GO:0009505|plant-type cell wall;GO:0007165|signal transduction;GO:0005618|cell wall;GO:0006952|defense response | rna-TAV2_LOCUS22208 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA892:rna-TAV2_LOCUS7814,rna-TAV2_LOCUS7812 | AT5G28720 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS19903 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA897:rna-TAV2_LOCUS7872,rna-TAV2_LOCUS7007 | AT3G45580||AT3G53690 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | rna-TAV2_LOCUS8104 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA898:rna-TAV2_LOCUS7938,rna-TAV2_LOCUS7939 | AT1G57820||AT5G39550 | VIM1, ORTH2; VIM1 (VARIANT IN METHYLATION 1); DNA binding / chromatin binding / double-stranded methylated DNA binding / histone binding / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / ubiquitin-protein ligase||VIM3, ORTH1; VIM3 (VARIANT IN METHYLATION 3); methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / protein binding / ubiquitin-protein ligase/ zinc ion binding | GO:0008327|methyl-CpG binding;GO:0005515|protein binding;GO:0004842|ubiquitin-protein ligase activity;GO:0051301|cell division;GO:0010428|methyl-CpNpG binding;GO:0003677|DNA binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0010369|chromocenter;GO:0006325|chromatin organization;GO:0016567|protein ubiquitination;GO:0031508|centromeric heterochromatin formation;GO:0005634|nucleus;GO:0003682|chromatin binding;GO:0010385|double-stranded methylated DNA binding;GO:0008270|zinc ion binding;GO:0042393|histone binding;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0032776|DNA methylation on cytosine;GO:0010429|methyl-CpNpN binding | rna-TAV2_LOCUS14822 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA902:rna-TAV2_LOCUS7999,rna-TAV2_LOCUS8007 | AT5G47180 | vesicle-associated membrane family protein / VAMP family protein | GO:0005886|plasma membrane;GO:0005198|structural molecule activity | rna-TAV2_LOCUS14915 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA907:rna-TAV2_LOCUS8084,rna-TAV2_LOCUS7981 | AT5G46090||AT4G18425 | unknown protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS25132 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA911:rna-TAV2_LOCUS8139,rna-TAV2_LOCUS8140 | AT2G01890||AT2G01880||AT1G14700 | PAP7, ATPAP7; PAP7 (PURPLE ACID PHOSPHATASE 7); acid phosphatase/ protein serine/threonine phosphatase||PAP3, ATPAP3; PAP3 (PURPLE ACID PHOSPHATASE 3); acid phosphatase/ protein serine/threonine phosphatase||PAP8, ATPAP8; PAP8 (PURPLE ACID PHOSPHATASE 8); acid phosphatase/ protein serine/threonine phosphatase | GO:0005773|vacuole;GO:0004722|protein serine/threonine phosphatase activity;GO:0012505|endomembrane system;GO:0016311|dephosphorylation;GO:0003993|acid phosphatase activity | rna-TAV2_LOCUS1528 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA920:rna-TAV2_LOCUS10106,rna-TAV2_LOCUS10101 | AT2G18210||AT4G36500 | unknown protein | GO:0005739|mitochondrion;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS22798 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA924:rna-TAV2_LOCUS10142,rna-TAV2_LOCUS10143 | AT3G22370||AT3G22360||AT1G32350 | AOX1D; AOX1D (alternative oxidase 1D); alternative oxidase||AOX1A, ATAOX1A; AOX1A (ALTERNATIVE OXIDASE 1A); alternative oxidase||AOX1B; AOX1B; alternative oxidase | GO:0045333|cellular respiration;GO:0005740|mitochondrial envelope;GO:0055114|oxidation reduction;GO:0009916|alternative oxidase activity;GO:0009409|response to cold;GO:0006950|response to stress;GO:0005739|mitochondrion | rna-TAV2_LOCUS27 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA933:rna-TAV2_LOCUS10291,rna-TAV2_LOCUS10290 | AT3G13090||AT3G13080 | ATMRP8, ATABCC6; ATMRP8; ATPase, coupled to transmembrane movement of substances||ATMRP3, MRP3; ATMRP3; ATPase, coupled to transmembrane movement of substances / chlorophyll catabolite transporter/ glutathione S-conjugate-exporting ATPase | GO:0005774|vacuolar membrane;GO:0010290|chlorophyll catabolite transmembrane transporter activity;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0015431|glutathione S-conjugate-exporting ATPase activity;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0000325|plant-type vacuole;GO:0006810|transport | rna-TAV2_LOCUS15265 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA938:rna-TAV2_LOCUS10441,rna-TAV2_LOCUS10446 | AT2G14860||AT4G33905 | peroxisomal membrane protein 22 kDa, putative | GO:0005778|peroxisomal membrane;GO:0016021|integral to membrane;GO:0008150|biological_process | rna-TAV2_LOCUS24314 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA941:rna-TAV2_LOCUS10504,rna-TAV2_LOCUS10503 | AT4G33720 | pathogenesis-related protein, putative | GO:0005576|extracellular region;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS25859 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA967:rna-TAV2_LOCUS11159,rna-TAV2_LOCUS11160 | AT3G14310||AT1G53840 | ATPME3; ATPME3; pectinesterase||ATPME1; ATPME1; pectinesterase | GO:0005576|extracellular region;GO:0016020|membrane;GO:0042545|cell wall modification;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0048046|apoplast;GO:0009505|plant-type cell wall;GO:0009624|response to nematode;GO:0030599|pectinesterase activity | rna-TAV2_LOCUS17466 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA977:rna-TAV2_LOCUS11381,rna-TAV2_LOCUS11379 | AT2G20610||AT5G36160 | SUR1, HLS3, RTY, ALF1, RTY1; SUR1 (SUPERROOT 1); S-alkylthiohydroximate lyase/ carbon-sulfur lyase/ transaminase||aminotransferase-related | GO:0016846|carbon-sulfur lyase activity;GO:0019446|tyrosine catabolic process to phosphoenolpyruvate;GO:0016769|transferase activity, transferring nitrogenous groups;GO:0008483|transaminase activity;GO:0009684|indoleacetic acid biosynthetic process;GO:0016020|membrane;GO:0003824|catalytic activity;GO:0006519|cellular amino acid and derivative metabolic process;GO:0030170|pyridoxal phosphate binding;GO:0019761|glucosinolate biosynthetic process;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0005575|cellular_component;GO:0048830|adventitious root development;GO:0009058|biosynthetic process;GO:0001560|regulation of cell growth by extracellular stimulus | rna-TAV2_LOCUS24682 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA978:rna-TAV2_LOCUS11392,rna-TAV2_LOCUS11393 | AT3G20155 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | rna-TAV2_LOCUS227 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA988:rna-TAV2_LOCUS11568,rna-TAV2_LOCUS11567 | AT3G02780||AT5G16440 | IPP1; IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase||IPP2, IPIAT1, IDI2; IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2); isopentenyl-diphosphate delta-isomerase | GO:0004452|isopentenyl-diphosphate delta-isomerase activity;GO:0015995|chlorophyll biosynthetic process;GO:0009536|plastid;GO:0005829|cytosol;GO:0009908|flower development;GO:0009240|isopentenyl diphosphate biosynthetic process;GO:0008299|isoprenoid biosynthetic process;GO:0009507|chloroplast;GO:0005739|mitochondrion | rna-TAV2_LOCUS19709 | 3 | 1 | Thlaspi arvense | Tarvense | |||
| TA1001:rna-TAV2_LOCUS8772,rna-TAV2_LOCUS8771 | AT3G06470 | GNS1/SUR4 membrane family protein | GO:0016021|integral to membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1003:rna-TAV2_LOCUS8782,rna-TAV2_LOCUS11540 | AT3G21210 | protein binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0006950|response to stress;GO:0005575|cellular_component;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1004:rna-TAV2_LOCUS8783,rna-TAV2_LOCUS8784 | AT4G38940 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1006:rna-TAV2_LOCUS8844,rna-TAV2_LOCUS8845 | AT2G15430 | RBP36A, RPB35.5A, NRPB3, NRPD3, NRPE3A; NRPB3; DNA binding / DNA-directed RNA polymerase/ protein dimerization | GO:0005730|nucleolus;GO:0005665|DNA-directed RNA polymerase II, core complex;GO:0003899|DNA-directed RNA polymerase activity;GO:0005737|cytoplasm;GO:0000418|DNA-directed RNA polymerase IV complex;GO:0046983|protein dimerization activity;GO:0005634|nucleus;GO:0006350|transcription;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1008:rna-TAV2_LOCUS8965,rna-TAV2_LOCUS8967 | AT3G06620 | protein kinase family protein | GO:0016301|kinase activity;GO:0006355|regulation of transcription, DNA-dependent;GO:0007165|signal transduction;GO:0006468|protein amino acid phosphorylation;GO:0004712|protein serine/threonine/tyrosine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1009:rna-TAV2_LOCUS8983,rna-TAV2_LOCUS8978 | AT3G14160 | oxidoreductase | GO:0005575|cellular_component;GO:0016491|oxidoreductase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1010:rna-TAV2_LOCUS9006,rna-TAV2_LOCUS9005 | AT3G22780||AT3G22760 | TSO1, ATTSO1; TSO1 (CHINESE FOR 'UGLY'); transcription factor||SOL1; SOL1; transcription factor | GO:0003700|transcription factor activity;GO:0009934|regulation of meristem structural organization;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1012:rna-TAV2_LOCUS9042,rna-TAV2_LOCUS10156 | AT3G15870||AT3G15850 | oxidoreductase||FAD5, FADB, JB67, ADS3; FAD5 (FATTY ACID DESATURASE 5); 16:0 monogalactosyldiacylglycerol desaturase/ oxidoreductase | GO:0009979|16:0 monogalactosyldiacylglycerol desaturase activity;GO:0016491|oxidoreductase activity;GO:0010205|photoinhibition;GO:0009579|thylakoid;GO:0006629|lipid metabolic process;GO:0006636|unsaturated fatty acid biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1014:rna-TAV2_LOCUS9071,rna-TAV2_LOCUS11277 | AT1G73490 | RNA recognition motif (RRM)-containing protein | GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1017:rna-TAV2_LOCUS9138,rna-TAV2_LOCUS11118 | AT3G21510 | AHP1; AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1); histidine phosphotransfer kinase | GO:0005737|cytoplasm;GO:0000160|two-component signal transduction system (phosphorelay);GO:0009927|histidine phosphotransfer kinase activity;GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1020:rna-TAV2_LOCUS9181,rna-TAV2_LOCUS9190 | AT3G03410||AT3G03400 | calmodulin-related protein, putative | GO:0005509|calcium ion binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1021:rna-TAV2_LOCUS9196,rna-TAV2_LOCUS9199 | AT3G19595 | phosphoprotein phosphatase | GO:0005634|nucleus;GO:0004721|phosphoprotein phosphatase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1022:rna-TAV2_LOCUS9203,rna-TAV2_LOCUS9205 | AT2G15630 | pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1024:rna-TAV2_LOCUS9269,rna-TAV2_LOCUS9268 | AT2G18590 | carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0016020|membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005351|sugar:hydrogen symporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1025:rna-TAV2_LOCUS9271,rna-TAV2_LOCUS8790 | AT2G13790 | ATSERK4, SERK4, BKK1; SERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4); protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase | GO:0005515|protein binding;GO:0009742|brassinosteroid mediated signaling pathway;GO:0010149|senescence;GO:0012505|endomembrane system;GO:0010200|response to chitin;GO:0004675|transmembrane receptor protein serine/threonine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0008219|cell death | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1026:rna-TAV2_LOCUS9274,rna-TAV2_LOCUS9275 | AT3G12340 | FK506 binding / peptidyl-prolyl cis-trans isomerase | GO:0009543|chloroplast thylakoid lumen;GO:0006457|protein folding;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0005528|FK506 binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1030:rna-TAV2_LOCUS9315,rna-TAV2_LOCUS11251 | AT2G19385||AT2G19380 | zinc ion binding||RNA recognition motif (RRM)-containing protein | GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005622|intracellular;GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1031:rna-TAV2_LOCUS9332,rna-TAV2_LOCUS9333 | AT3G21600 | senescence/dehydration-associated protein-related | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1032:rna-TAV2_LOCUS9460,rna-TAV2_LOCUS9466 | AT2G17695 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1033:rna-TAV2_LOCUS9472,rna-TAV2_LOCUS9471 | AT3G23830||AT5G47320 | RPS19; RPS19 (RIBOSOMAL PROTEIN S19); RNA binding||GR-RBP4, GRP4; GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding / single-stranded DNA binding | GO:0005763|mitochondrial small ribosomal subunit;GO:0006412|translation;GO:0003690|double-stranded DNA binding;GO:0003723|RNA binding;GO:0003697|single-stranded DNA binding;GO:0006970|response to osmotic stress;GO:0009651|response to salt stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1034:rna-TAV2_LOCUS9476,rna-TAV2_LOCUS9475 | AT3G23840 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0016740|transferase activity;GO:0009535|chloroplast thylakoid membrane;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1035:rna-TAV2_LOCUS9545,rna-TAV2_LOCUS9851 | AT2G17050||AT2G17060 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1036:rna-TAV2_LOCUS9551,rna-TAV2_LOCUS9550 | AT2G16005 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1038:rna-TAV2_LOCUS9581,rna-TAV2_LOCUS9582 | AT3G03530||AT3G03520 | phosphoesterase family protein||NPC4; NPC4 (NONSPECIFIC PHOSPHOLIPASE C4); hydrolase, acting on ester bonds / phospholipase C | GO:0009395|phospholipid catabolic process;GO:0005773|vacuole;GO:0016788|hydrolase activity, acting on ester bonds;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0004629|phospholipase C activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1039:rna-TAV2_LOCUS9608,rna-TAV2_LOCUS10692 | AT1G61410||AT3G23100 | tolA protein-related||XRCC4; XRCC4; protein C-terminus binding | GO:0008022|protein C-terminus binding;GO:0005515|protein binding;GO:0006310|DNA recombination;GO:0008152|metabolic process;GO:0006302|double-strand break repair;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1040:rna-TAV2_LOCUS9610,rna-TAV2_LOCUS11215 | AT3G22880 | ATDMC1, DMC1, ARLIM15; DMC1 (DISRUPTION OF MEIOTIC CONTROL 1); ATP binding / DNA binding / DNA-dependent ATPase/ damaged DNA binding / nucleoside-triphosphatase/ nucleotide binding / protein binding | GO:0017111|nucleoside-triphosphatase activity;GO:0005515|protein binding;GO:0007131|reciprocal meiotic recombination;GO:0006281|DNA repair;GO:0005524|ATP binding;GO:0003684|damaged DNA binding;GO:0007126|meiosis;GO:0000166|nucleotide binding;GO:0008094|DNA-dependent ATPase activity;GO:0005634|nucleus;GO:0051026|chiasma assembly;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1041:rna-TAV2_LOCUS9615,rna-TAV2_LOCUS9614 | AT3G23180 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: lesion inducing protein-related (TAIR:AT3G23190.1); Has 68 Blast hits to 68 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0006952|defense response;GO:0003674|molecular_function;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1049:rna-TAV2_LOCUS9821,rna-TAV2_LOCUS9528 | AT4G15410 | PUX5; PUX5 (Arabidopsis thaliana serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma); protein binding | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1050:rna-TAV2_LOCUS9847,rna-TAV2_LOCUS9285 | AT2G16950 | TRN1, ATTRN1; TRN1 (TRANSPORTIN 1); protein transporter | GO:0000059|protein import into nucleus, docking;GO:0051170|nuclear import;GO:0005643|nuclear pore;GO:0005737|cytoplasm;GO:0005634|nucleus;GO:0008565|protein transporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1051:rna-TAV2_LOCUS9853,rna-TAV2_LOCUS11121 | AT3G21530 | endonuclease/exonuclease/phosphatase family protein | GO:0016787|hydrolase activity;GO:0005739|mitochondrion;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1052:rna-TAV2_LOCUS9872,rna-TAV2_LOCUS9893 | ATCG01110 | NDHH; Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. | GO:0009507|chloroplast;GO:0009772|photosynthetic electron transport in photosystem II;GO:0003959|NADPH dehydrogenase activity;GO:0009535|chloroplast thylakoid membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1053:rna-TAV2_LOCUS9874,rna-TAV2_LOCUS9875 | AT4G38120 | binding | GO:0005886|plasma membrane;GO:0005488|binding;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1054:rna-TAV2_LOCUS9882,rna-TAV2_LOCUS9880 | AT3G04000||AT3G03980 | short-chain dehydrogenase/reductase (SDR) family protein | GO:0008152|metabolic process;GO:0005488|binding;GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1058:rna-TAV2_LOCUS9944,rna-TAV2_LOCUS9947 | AT3G03240||AT3G03230 | esterase/lipase/thioesterase family protein | GO:0012505|endomembrane system;GO:0016020|membrane;GO:0008150|biological_process;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1059:rna-TAV2_LOCUS12334,rna-TAV2_LOCUS12337 | AT1G29340 | PUB17, ATPUB17; PUB17 (PLANT U-BOX 17); ubiquitin-protein ligase | GO:0016567|protein ubiquitination;GO:0004842|ubiquitin-protein ligase activity;GO:0009817|defense response to fungus, incompatible interaction;GO:0009814|defense response, incompatible interaction;GO:0006915|apoptosis;GO:0000151|ubiquitin ligase complex | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1060:rna-TAV2_LOCUS12387,rna-TAV2_LOCUS12975 | AT2G25950 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1061:rna-TAV2_LOCUS12422,rna-TAV2_LOCUS14920 | AT2G47210 | myb family transcription factor | GO:0006499|N-terminal protein myristoylation;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1062:rna-TAV2_LOCUS12438,rna-TAV2_LOCUS13744 | AT2G41360 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing F-box family protein (TAIR:AT2G44630.1); Has 346 Blast hits to 337 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1063:rna-TAV2_LOCUS12459,rna-TAV2_LOCUS14115 | AT2G43250 | unknown protein | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1064:rna-TAV2_LOCUS12464,rna-TAV2_LOCUS12460 | AT2G43260 | F-box family protein / S locus-related | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1065:rna-TAV2_LOCUS12491,rna-TAV2_LOCUS12490 | AT2G30840 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1067:rna-TAV2_LOCUS12528,rna-TAV2_LOCUS12527 | AT2G42440||AT2G42430 | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29) (TAIR:AT3G58190.1); Has 322 Blast hits to 322 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||LBD16, ASL18; LBD16 (LATERAL ORGAN BOUNDARIES-DOMAIN 16) | GO:0005634|nucleus;GO:0010311|lateral root formation;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1068:rna-TAV2_LOCUS12562,rna-TAV2_LOCUS12560 | AT2G34355||AT2G34350 | nodulin-related | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1069:rna-TAV2_LOCUS12569,rna-TAV2_LOCUS12568 | AT2G37460 | nodulin MtN21 family protein | GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1072:rna-TAV2_LOCUS12639,rna-TAV2_LOCUS12640 | AT5G57020 | NMT1, ATNMT1; NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE); glycylpeptide N-tetradecanoyltransferase/ myristoyltransferase | GO:0010064|embryonic shoot morphogenesis;GO:0005840|ribosome;GO:0005829|cytosol;GO:0019107|myristoyltransferase activity;GO:0006499|N-terminal protein myristoylation;GO:0004379|glycylpeptide N-tetradecanoyltransferase activity;GO:0040007|growth | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1073:rna-TAV2_LOCUS12645,rna-TAV2_LOCUS12963 | AT2G27100 | SE; SE (SERRATE); DNA binding / transcription factor | GO:0048367|shoot development;GO:0048507|meristem development;GO:0010267|production of ta-siRNAs involved in RNA interference;GO:0005829|cytosol;GO:0005730|nucleolus;GO:0016568|chromatin modification;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0031053|primary microRNA processing;GO:0009955|adaxial/abaxial pattern formation;GO:0016607|nuclear speck;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1076:rna-TAV2_LOCUS12764,rna-TAV2_LOCUS14651 | AT1G10717||AT1G10745 | Encodes a Maternally expressed gene (MEG) family protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1083:rna-TAV2_LOCUS12959,rna-TAV2_LOCUS12952 | AT2G32750||AT2G32740 | exostosin family protein | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1084:rna-TAV2_LOCUS12974,rna-TAV2_LOCUS13807 | AT4G39990 | ATRABA4B, ATRAB11G, ATGB3, RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding | GO:0005886|plasma membrane;GO:0032456|endocytic recycling;GO:0005525|GTP binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1085:rna-TAV2_LOCUS12995,rna-TAV2_LOCUS12653 | AT2G31720 | DNA binding | GO:0006355|regulation of transcription, DNA-dependent;GO:0005575|cellular_component;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1086:rna-TAV2_LOCUS13023,rna-TAV2_LOCUS13024 | AT2G46470||AT2G46455 | INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion, integral to membrane; CONTAINS InterPro DOMAIN/s: 60 kDa inner membrane insertion protein (InterPro:IPR001708); BEST Arabidopsis thaliana protein match is: OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) (TAIR:AT2G46470.1); Has 21 Blast hits to 21 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||OXA1L; OXA1L (INNER MEMBRANE PROTEIN OXA1-LIKE) | GO:0003674|molecular_function;GO:0016020|membrane;GO:0045039|protein import into mitochondrial inner membrane;GO:0016021|integral to membrane;GO:0051205|protein insertion into membrane;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1087:rna-TAV2_LOCUS13073,rna-TAV2_LOCUS13074 | AT2G29065||AT2G29060 | ||scarecrow transcription factor family protein | ;GO:0005575|cellular_component;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1089:rna-TAV2_LOCUS13122,rna-TAV2_LOCUS13116 | AT5G25860 | F-box family protein | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1090:rna-TAV2_LOCUS13219,rna-TAV2_LOCUS13218 | AT5G41490||AT5G41510 | F-box family protein | ;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1091:rna-TAV2_LOCUS13228,rna-TAV2_LOCUS14923 | AT2G32030||AT2G32020 | GCN5-related N-acetyltransferase (GNAT) family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0009737|response to abscisic acid stimulus;GO:0008080|N-acetyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1092:rna-TAV2_LOCUS13236,rna-TAV2_LOCUS13233 | AT2G23200 | protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1093:rna-TAV2_LOCUS13303,rna-TAV2_LOCUS13304 | AT2G41260||AT2G41280 | M10, ATM10; M10||M17, ATM17; M17 | GO:0005576|extracellular region;GO:0009790|embryonic development;GO:0003674|molecular_function;GO:0012505|endomembrane system;GO:0010162|seed dormancy;GO:0006499|N-terminal protein myristoylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1094:rna-TAV2_LOCUS13307,rna-TAV2_LOCUS13308 | AT2G41300||AT2G41290 | strictosidine synthase||strictosidine synthase family protein | GO:0009821|alkaloid biosynthetic process;GO:0016844|strictosidine synthase activity;GO:0009058|biosynthetic process;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1095:rna-TAV2_LOCUS13380,rna-TAV2_LOCUS13374 | AT1G43760||AT2G11035 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40390.1); Has 2614 Blast hits to 2551 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 1517; Fungi - 2; Plants - 1086; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).|| | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1096:rna-TAV2_LOCUS13428,rna-TAV2_LOCUS13430 | AT2G33290 | SUVH2, SDG3, ATSUVH2; SUVH2 (SU(VAR)3-9 HOMOLOG 2); histone methyltransferase | GO:0005720|nuclear heterochromatin;GO:0040029|regulation of gene expression, epigenetic;GO:0016571|histone methylation;GO:0005634|nucleus;GO:0042054|histone methyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1100:rna-TAV2_LOCUS13458,rna-TAV2_LOCUS14467 | AT2G48160 | EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: PWWP domain-containing protein (TAIR:AT3G63070.1); Has 1292 Blast hits to 1135 proteins in 175 species: Archae - 2; Bacteria - 174; Metazoa - 679; Fungi - 194; Plants - 113; Viruses - 2; Other Eukaryotes - 128 (source: NCBI BLink). | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1102:rna-TAV2_LOCUS13460,rna-TAV2_LOCUS14469 | AT2G48140 | EDA4; EDA4 (embryo sac development arrest 4); lipid binding | GO:0009561|megagametogenesis;GO:0031225|anchored to membrane;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1104:rna-TAV2_LOCUS13517,rna-TAV2_LOCUS13521 | AT2G43420||AT2G43410 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein||FPA; FPA; RNA binding | GO:0005488|binding;GO:0009790|embryonic development;GO:0031048|chromatin silencing by small RNA;GO:0003723|RNA binding;GO:0009553|embryo sac development;GO:0003824|catalytic activity;GO:0000785|chromatin;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0006694|steroid biosynthetic process;GO:0009911|positive regulation of flower development;GO:0003854|3-beta-hydroxy-delta5-steroid dehydrogenase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1106:rna-TAV2_LOCUS13607,rna-TAV2_LOCUS12565 | AT2G34390 | NIP2;1, NLM4; NIP2;1 (NOD26-LIKE INTRINSIC PROTEIN 2;1); lactate transmembrane transporter/ water channel | GO:0016020|membrane;GO:0015129|lactate transmembrane transporter activity;GO:0005886|plasma membrane;GO:0015250|water channel activity;GO:0001666|response to hypoxia;GO:0015727|lactate transport;GO:0006810|transport;GO:0005783|endoplasmic reticulum | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1107:rna-TAV2_LOCUS13613,rna-TAV2_LOCUS13610 | AT2G34500 | CYP710A1; CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1); C-22 sterol desaturase/ oxygen binding | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1111:rna-TAV2_LOCUS13687,rna-TAV2_LOCUS13683 | AT2G27260 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Harpin-induced 1 (InterPro:IPR010847); Has 584 Blast hits to 584 proteins in 25 species: Archae - 2; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 578; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1112:rna-TAV2_LOCUS13692,rna-TAV2_LOCUS12757 | AT2G31790||AT2G31750 | UGT74D1; UGT74D1 (UDP-glucosyl transferase 74D1); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1114:rna-TAV2_LOCUS13736,rna-TAV2_LOCUS13738 | AT2G35380 | peroxidase 20 (PER20) (P20) | GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0006979|response to oxidative stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1116:rna-TAV2_LOCUS13746,rna-TAV2_LOCUS13747 | AT2G43730||AT2G43745 | lectin-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: lectin-related (TAIR:AT2G43730.1); Has 20 Blast hits to 20 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1117:rna-TAV2_LOCUS13750,rna-TAV2_LOCUS13752 | AT2G43690||AT2G43700 | lectin protein kinase family protein||lectin protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1121:rna-TAV2_LOCUS13792,rna-TAV2_LOCUS13794 | AT4G16845 | VRN2; VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor | GO:0003700|transcription factor activity;GO:0010048|vernalization response;GO:0009409|response to cold;GO:0006349|regulation of gene expression by genetic imprinting;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1122:rna-TAV2_LOCUS13795,rna-TAV2_LOCUS13797 | AT2G35658 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1123:rna-TAV2_LOCUS13800,rna-TAV2_LOCUS13469 | AT2G45610||AT2G45600 | hydrolase | GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1125:rna-TAV2_LOCUS13854,rna-TAV2_LOCUS13857 | AT2G41930 | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1128:rna-TAV2_LOCUS13906,rna-TAV2_LOCUS13907 | AT2G28010 | aspartyl protease family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1130:rna-TAV2_LOCUS13946,rna-TAV2_LOCUS13948 | AT2G31210||AT2G31220 | basic helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1133:rna-TAV2_LOCUS14046,rna-TAV2_LOCUS12293 | AT4G03170||AT4G03160 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana protein match is: DNA binding (TAIR:AT4G03170.1); Has 29 Blast hits to 29 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 13; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).||DNA binding | GO:0003674|molecular_function;GO:0006355|regulation of transcription, DNA-dependent;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1135:rna-TAV2_LOCUS14076,rna-TAV2_LOCUS12327 | AT2G31720 | DNA binding | GO:0006355|regulation of transcription, DNA-dependent;GO:0005575|cellular_component;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1136:rna-TAV2_LOCUS14077,rna-TAV2_LOCUS12326 | AT2G31280 | CPUORF7; basic helix-loop-helix (bHLH) protein-related | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1137:rna-TAV2_LOCUS14102,rna-TAV2_LOCUS14104 | AT1G73760 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0009507|chloroplast;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1138:rna-TAV2_LOCUS14107,rna-TAV2_LOCUS12365 | AT2G24840 | AGL61, DIA; AGL61 (AGAMOUS-LIKE 61); DNA binding / transcription factor | GO:0009559|embryo sac central cell differentiation;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1139:rna-TAV2_LOCUS14110,rna-TAV2_LOCUS14113 | AT2G43220 | DC1 domain-containing protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1140:rna-TAV2_LOCUS14149,rna-TAV2_LOCUS14142 | AT2G36970 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1142:rna-TAV2_LOCUS14200,rna-TAV2_LOCUS12428 | AT2G36100 | integral membrane family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1143:rna-TAV2_LOCUS14218,rna-TAV2_LOCUS14219 | AT2G38995 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1298 (InterPro:IPR009721), Uncharacterised protein family UPF0089 (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: WSD1; diacylglycerol O-acyltransferase/ long-chain-alcohol O-fatty-acyltransferase (TAIR:AT5G37300.1); Has 521 Blast hits to 512 proteins in 79 species: Archae - 2; Bacteria - 393; Metazoa - 7; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1144:rna-TAV2_LOCUS14227,rna-TAV2_LOCUS13513 | AT2G25560 | DNAJ heat shock N-terminal domain-containing protein | GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding;GO:0051082|unfolded protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1145:rna-TAV2_LOCUS14253,rna-TAV2_LOCUS13618 | AT2G28650||AT2G28640 | ATEXO70H5; ATEXO70H5 (exocyst subunit EXO70 family protein H5); protein binding||ATEXO70H8; ATEXO70H8 (exocyst subunit EXO70 family protein H8); protein binding | GO:0006904|vesicle docking during exocytosis;GO:0006887|exocytosis;GO:0005515|protein binding;GO:0000145|exocyst | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1146:rna-TAV2_LOCUS14266,rna-TAV2_LOCUS14262 | AT2G30720 | thioesterase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0005575|cellular_component;GO:0016291|acyl-CoA thioesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1148:rna-TAV2_LOCUS14311,rna-TAV2_LOCUS14315 | AT2G26070 | RTE1; RTE1 (REVERSION-TO-ETHYLENE SENSITIVITY1) | GO:0003674|molecular_function;GO:0009723|response to ethylene stimulus;GO:0010105|negative regulation of ethylene mediated signaling pathway;GO:0005783|endoplasmic reticulum;GO:0005794|Golgi apparatus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1149:rna-TAV2_LOCUS14317,rna-TAV2_LOCUS14318 | AT3G15960 | ATP binding / mismatched DNA binding | GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0030983|mismatched DNA binding;GO:0006298|mismatch repair | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1150:rna-TAV2_LOCUS14345,rna-TAV2_LOCUS14347 | AT5G67000||AT5G67010 | AP2 domain-containing transcription factor, putative||DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1151:rna-TAV2_LOCUS14376,rna-TAV2_LOCUS14459 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1152:rna-TAV2_LOCUS14408,rna-TAV2_LOCUS12633 | AT2G29740||AT2G29730 | UGT71C2; UGT71C2 (UDP-GLUCOSYL TRANSFERASE 71C2); UDP-glycosyltransferase/ quercetin 3'-O-glucosyltransferase/ quercetin 3-O-glucosyltransferase/ quercetin 7-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT71D1; UGT71D1 (UDP-GLUCOSYL TRANSFERASE 71D1); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component;GO:0008194|UDP-glycosyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1155:rna-TAV2_LOCUS14482,rna-TAV2_LOCUS14484 | AT2G27710 | 60S acidic ribosomal protein P2 (RPP2B) | GO:0005840|ribosome;GO:0005829|cytosol;GO:0016020|membrane;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009409|response to cold;GO:0006414|translational elongation;GO:0009507|chloroplast;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1156:rna-TAV2_LOCUS14526,rna-TAV2_LOCUS13504 | AT2G39330||AT2G39310 | JAL23; JAL23 (JACALIN-RELATED LECTIN 23)||JAL22; JAL22 (JACALIN-RELATED LECTIN 22) | GO:0005773|vacuole;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1157:rna-TAV2_LOCUS14563,rna-TAV2_LOCUS14564 | AT2G34030||AT2G34020 | calcium-binding EF hand family protein||calcium ion binding | GO:0012505|endomembrane system;GO:0005509|calcium ion binding;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1158:rna-TAV2_LOCUS14572,rna-TAV2_LOCUS14570 | AT2G30560 | glycine-rich protein | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1161:rna-TAV2_LOCUS14592,rna-TAV2_LOCUS14591 | AT2G39370 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1163:rna-TAV2_LOCUS14649,rna-TAV2_LOCUS14643 | AT2G35000||AT2G34990 | zinc finger (C3HC4-type RING finger) family protein | GO:0005515|protein binding;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0012505|endomembrane system;GO:0010200|response to chitin;GO:0050832|defense response to fungus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1164:rna-TAV2_LOCUS14709,rna-TAV2_LOCUS15010 | AT2G32860 | BGLU33; BGLU33 (BETA GLUCOSIDASE 33); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1165:rna-TAV2_LOCUS14743,rna-TAV2_LOCUS12994 | AT2G31865||AT2G31870 | poly (ADP-ribose) glycohydrolase (PARG) family protein||TEJ; TEJ (Sanskrit for 'bright'); poly(ADP-ribose) glycohydrolase | GO:0050832|defense response to fungus;GO:0005575|cellular_component;GO:0004649|poly(ADP-ribose) glycohydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1169:rna-TAV2_LOCUS14884,rna-TAV2_LOCUS14891 | AT2G20960||AT2G20950 | pEARLI4; pEARLI4||EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38550.1); Has 618 Blast hits to 562 proteins in 105 species: Archae - 7; Bacteria - 22; Metazoa - 391; Fungi - 75; Plants - 96; Viruses - 2; Other Eukaryotes - 25 (source: NCBI BLink). | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1174:rna-TAV2_LOCUS14937,rna-TAV2_LOCUS12654 | AT3G06680||AT3G06700 | 60S ribosomal protein L29 (RPL29A)||60S ribosomal protein L29 (RPL29B) | GO:0005840|ribosome;GO:0006412|translation;GO:0042254|ribosome biogenesis;GO:0005730|nucleolus;GO:0003735|structural constituent of ribosome;GO:0022625|cytosolic large ribosomal subunit | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1176:rna-TAV2_LOCUS14973,rna-TAV2_LOCUS14594 | AT2G42690 | lipase, putative | GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1177:rna-TAV2_LOCUS14978,rna-TAV2_LOCUS12494 | AT2G30870||AT2G30860 | ATGSTF9, GLUTTR, ATGSTF7; ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase||ATGSTF10, ERD13, ATGSTF4, GSTF10; GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10); copper ion binding / glutathione binding / glutathione transferase | GO:0005773|vacuole;GO:0005507|copper ion binding;GO:0042742|defense response to bacterium;GO:0046686|response to cadmium ion;GO:0043295|glutathione binding;GO:0004602|glutathione peroxidase activity;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0048046|apoplast;GO:0004364|glutathione transferase activity;GO:0009414|response to water deprivation;GO:0009570|chloroplast stroma;GO:0009407|toxin catabolic process;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0006952|defense response;GO:0010043|response to zinc ion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1178:rna-TAV2_LOCUS14994,rna-TAV2_LOCUS14995 | AT2G42360||AT2G42350 | zinc finger (C3HC4-type RING finger) family protein | GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1179:rna-TAV2_LOCUS15012,rna-TAV2_LOCUS15011 | AT2G32870||AT2G32880 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1180:rna-TAV2_LOCUS15180,rna-TAV2_LOCUS15181 | AT3G59740||AT3G59700 | ATHLECRK, LECRK1; ATHLECRK (ARABIDOPSIS THALIANA LECTIN-RECEPTOR KINASE); kinase||receptor lectin kinase 3 (lecRK3) | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1184:rna-TAV2_LOCUS15354,rna-TAV2_LOCUS15353 | AT4G09360||AT1G72870 | disease resistance protein (TIR-NBS class), putative||disease resistance protein (NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0005575|cellular_component;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1185:rna-TAV2_LOCUS15369,rna-TAV2_LOCUS15370 | AT1G68370 | ARG1; ARG1 (ALTERED RESPONSE TO GRAVITY 1); cytoskeletal protein binding | GO:0006457|protein folding;GO:0008092|cytoskeletal protein binding;GO:0005575|cellular_component;GO:0009958|positive gravitropism | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1186:rna-TAV2_LOCUS15376,rna-TAV2_LOCUS15373 | AT1G68380||AT1G68390 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1189:rna-TAV2_LOCUS15424,rna-TAV2_LOCUS15423 | AT1G69890||AT1G69900 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27100.1); Has 121 Blast hits to 109 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin_cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27100.1); Has 142 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1190:rna-TAV2_LOCUS15453,rna-TAV2_LOCUS15451 | AT3G56980||AT3G56970 | BHLH038, ORG2; BHLH038; DNA binding / transcription factor||BHLH039, ORG3; BHLH039; DNA binding / transcription factor | GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1191:rna-TAV2_LOCUS15466,rna-TAV2_LOCUS15465 | AT3G48350||AT3G48340 | cysteine proteinase, putative||cysteine-type endopeptidase/ cysteine-type peptidase | GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1192:rna-TAV2_LOCUS15483,rna-TAV2_LOCUS17385 | AT3G59260||AT3G59220 | pirin, putative||PRN, PRN1, ATPIRIN1; PRN (PIRIN); calmodulin binding | GO:0009737|response to abscisic acid stimulus;GO:0005516|calmodulin binding;GO:0005515|protein binding;GO:0010244|response to low fluence blue light stimulus by blue low-fluence system;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1193:rna-TAV2_LOCUS15515,rna-TAV2_LOCUS15895 | AT2G39570 | ACT domain-containing protein | GO:0008152|metabolic process;GO:0016597|amino acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1195:rna-TAV2_LOCUS15577,rna-TAV2_LOCUS17800 | AT1G67460||AT1G67440 | emb1688; emb1688 (embryo defective 1688); GTP binding / GTPase||GTP binding / GTPase | GO:0005525|GTP binding;GO:0009793|embryonic development ending in seed dormancy;GO:0003924|GTPase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1196:rna-TAV2_LOCUS15596,rna-TAV2_LOCUS15598 | AT3G53310 | transcriptional factor B3 family protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1197:rna-TAV2_LOCUS15615,rna-TAV2_LOCUS15608 | AT3G60280||AT3G60270 | UCC3; UCC3 (UCLACYANIN 3); copper ion binding / electron carrier||uclacyanin, putative | GO:0005507|copper ion binding;GO:0031225|anchored to membrane;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1199:rna-TAV2_LOCUS15657,rna-TAV2_LOCUS15658 | AT3G43790 | ZIFL2; ZIFL2 (ZINC INDUCED FACILITATOR-like 2); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | GO:0015144|carbohydrate transmembrane transporter activity;GO:0009624|response to nematode;GO:0005351|sugar:hydrogen symporter activity;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1200:rna-TAV2_LOCUS15710,rna-TAV2_LOCUS15707 | AT3G51360||AT3G51330 | aspartyl protease family protein | GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0031225|anchored to membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1201:rna-TAV2_LOCUS15723,rna-TAV2_LOCUS16372 | AT1G65780||AT1G65810 | tRNA-splicing endonuclease positive effector-related | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1203:rna-TAV2_LOCUS15753,rna-TAV2_LOCUS16944 | AT5G45000||AT5G45220 | transmembrane receptor||Toll-Interleukin-Resistance (TIR) domain-containing protein | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0007165|signal transduction;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1206:rna-TAV2_LOCUS15855,rna-TAV2_LOCUS17240 | AT3G50470 | HR3, MLA10; HR3 (HOMOLOG OF RPW8 3) | GO:0051707|response to other organism;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1208:rna-TAV2_LOCUS15881,rna-TAV2_LOCUS15876 | AT1G79950||AT1G79890 | helicase-related | GO:0004003|ATP-dependent DNA helicase activity;GO:0003676|nucleic acid binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0005524|ATP binding;GO:0006139|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0016818|hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;GO:0008026|ATP-dependent helicase activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1209:rna-TAV2_LOCUS15914,rna-TAV2_LOCUS15913 | AT1G72150||AT1G72160 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein||PATL1; PATL1 (PATELLIN 1); transporter | GO:0005773|vacuole;GO:0016020|membrane;GO:0009860|pollen tube growth;GO:0048046|apoplast;GO:0005886|plasma membrane;GO:0005215|transporter activity;GO:0006810|transport;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1212:rna-TAV2_LOCUS15988,rna-TAV2_LOCUS15987 | AT3G49850 | TRB3, ATTRB3, TBP2; TRB3 (TELOMERE REPEAT BINDING FACTOR 3); DNA binding / double-stranded telomeric DNA binding / protein homodimerization/ single-stranded telomeric DNA binding / transcription factor | GO:0003691|double-stranded telomeric DNA binding;GO:0009751|response to salicylic acid stimulus;GO:0042803|protein homodimerization activity;GO:0009739|response to gibberellin stimulus;GO:0009723|response to ethylene stimulus;GO:0046686|response to cadmium ion;GO:0043047|single-stranded telomeric DNA binding;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0000786|nucleosome;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1215:rna-TAV2_LOCUS16036,rna-TAV2_LOCUS16043 | AT1G71160 | KCS7; KCS7 (3-KETOACYL-COA SYNTHASE 7); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0003824|catalytic activity;GO:0016020|membrane;GO:0000038|very-long-chain fatty acid metabolic process;GO:0012505|endomembrane system;GO:0008415|acyltransferase activity;GO:0042335|cuticle development | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1217:rna-TAV2_LOCUS16072,rna-TAV2_LOCUS18011 | AT1G80790 | XH/XS domain-containing protein / XS zinc finger domain-containing protein | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1225:rna-TAV2_LOCUS16279,rna-TAV2_LOCUS17896 | AT5G41690||AT3G10845 | RNA binding / nucleic acid binding / nucleotide binding||RNA recognition motif (RRM)-containing protein | GO:0000166|nucleotide binding;GO:0003723|RNA binding;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1228:rna-TAV2_LOCUS16400,rna-TAV2_LOCUS16403 | AT4G02310||AT2G44700 | kelch repeat-containing F-box family protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1229:rna-TAV2_LOCUS16459,rna-TAV2_LOCUS16458 | AT1G70520||AT1G70530 | protein kinase family protein | GO:0005886|plasma membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1232:rna-TAV2_LOCUS16510,rna-TAV2_LOCUS17647 | AT1G78460 | SOUL heme-binding family protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1233:rna-TAV2_LOCUS16536,rna-TAV2_LOCUS16969 | AT3G47130||AT3G47150 | F-box family protein||F-box family protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1234:rna-TAV2_LOCUS16546,rna-TAV2_LOCUS16547 | AT3G51610||AT3G51590 | LTP12; LTP12 (LIPID TRANSFER PROTEIN 12); lipid binding||unknown protein | GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1237:rna-TAV2_LOCUS16635,rna-TAV2_LOCUS15263 | AT1G80170||AT1G80140 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein||polygalacturonase, putative / pectinase, putative | GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1238:rna-TAV2_LOCUS16668,rna-TAV2_LOCUS16669 | AT3G48430 | REF6; REF6 (RELATIVE OF EARLY FLOWERING 6); nucleic acid binding / transcription factor/ zinc ion binding | GO:0009741|response to brassinosteroid stimulus;GO:0003700|transcription factor activity;GO:0009826|unidimensional cell growth;GO:0048366|leaf development;GO:0010228|vegetative to reproductive phase transition of meristem;GO:0035067|negative regulation of histone acetylation;GO:0033169|histone H3-K9 demethylation;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1240:rna-TAV2_LOCUS16721,rna-TAV2_LOCUS16720 | AT3G48205 | Encodes a Plant thionin family protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1242:rna-TAV2_LOCUS16783,rna-TAV2_LOCUS16782 | AT3G50100 | SDN1; SDN1 (SMALL RNA DEGRADING NUCLEASE 1); 3'-5' exonuclease/ exonuclease | GO:0004527|exonuclease activity;GO:0008408|3'-5' exonuclease activity;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1245:rna-TAV2_LOCUS16819,rna-TAV2_LOCUS15704 | AT1G76640||AT1G76650 | calmodulin-related protein, putative||CML38; calcium-binding EF hand family protein | GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0005509|calcium ion binding;GO:0008150|biological_process;GO:0009611|response to wounding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1247:rna-TAV2_LOCUS16849,rna-TAV2_LOCUS17645 | AT1G78440||AT1G78550 | oxidoreductase, 2OG-Fe(II) oxygenase family protein||ATGA2OX1; ATGA2OX1 (gibberellin 2-oxidase 1); gibberellin 2-beta-dioxygenase | GO:0005506|iron ion binding;GO:0045487|gibberellin catabolic process;GO:0016491|oxidoreductase activity;GO:0045543|gibberellin 2-beta-dioxygenase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1248:rna-TAV2_LOCUS16867,rna-TAV2_LOCUS16866 | AT3G58190||AT2G42430 | LBD29, ASL16; LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)||LBD16, ASL18; LBD16 (LATERAL ORGAN BOUNDARIES-DOMAIN 16) | GO:0005634|nucleus;GO:0010311|lateral root formation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1249:rna-TAV2_LOCUS16890,rna-TAV2_LOCUS16891 | AT1G73550||AT1G73560 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein||lipid binding | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1251:rna-TAV2_LOCUS16923,rna-TAV2_LOCUS17863 | AT3G43270 | pectinesterase family protein | GO:0009505|plant-type cell wall;GO:0004857|enzyme inhibitor activity;GO:0030599|pectinesterase activity;GO:0042545|cell wall modification | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1254:rna-TAV2_LOCUS16966,rna-TAV2_LOCUS18116 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1255:rna-TAV2_LOCUS16967,rna-TAV2_LOCUS16964 | AT3G31925 | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1258:rna-TAV2_LOCUS17005,rna-TAV2_LOCUS17008 | AT1G76770||AT1G76780 | heat shock protein-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, flower, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28770.1); Has 268398 Blast hits to 81261 proteins in 2237 species: Archae - 1423; Bacteria - 22577; Metazoa - 121235; Fungi - 23871; Plants - 9365; Viruses - 1547; Other Eukaryotes - 88380 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1259:rna-TAV2_LOCUS17010,rna-TAV2_LOCUS17012 | AT1G76880||AT1G76890 | trihelix DNA-binding protein, putative||GT2, AT-GT2; GT2; transcription factor | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1260:rna-TAV2_LOCUS17041,rna-TAV2_LOCUS17040 | AT3G28550 | proline-rich extensin-like family protein | GO:0012505|endomembrane system;GO:0005199|structural constituent of cell wall;GO:0009664|plant-type cell wall organization | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1262:rna-TAV2_LOCUS17098,rna-TAV2_LOCUS17090 | AT1G71270 | POK, TTD8, ATVPS52; POK (POKY POLLEN TUBE) | GO:0003674|molecular_function;GO:0000139|Golgi membrane;GO:0009860|pollen tube growth;GO:0019953|sexual reproduction;GO:0012505|endomembrane system;GO:0005794|Golgi apparatus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1264:rna-TAV2_LOCUS17106,rna-TAV2_LOCUS17111 | AT3G49480 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G05080.1); Has 443 Blast hits to 431 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 441; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1265:rna-TAV2_LOCUS17140,rna-TAV2_LOCUS17139 | AT3G47910 | ubiquitin thiolesterase/ zinc ion binding | GO:0004221|ubiquitin thiolesterase activity;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0008270|zinc ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1267:rna-TAV2_LOCUS17178,rna-TAV2_LOCUS17181 | AT3G52820||AT3G52780 | ATPAP20, PAP20; PAP20; acid phosphatase/ protein serine/threonine phosphatase||ATPAP22, PAP22; PAP22 (PURPLE ACID PHOSPHATASE 22); acid phosphatase/ protein serine/threonine phosphatase | GO:0012505|endomembrane system;GO:0003993|acid phosphatase activity;GO:0004722|protein serine/threonine phosphatase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1268:rna-TAV2_LOCUS17208,rna-TAV2_LOCUS18083 | AT1G67550 | URE; URE (UREASE); urease | GO:0005575|cellular_component;GO:0009039|urease activity;GO:0006807|nitrogen compound metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1269:rna-TAV2_LOCUS17226,rna-TAV2_LOCUS17228 | AT5G35160 | LOCATED IN: integral to membrane, Golgi apparatus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nonaspanin (TM9SF) (InterPro:IPR004240); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12650.1); Has 1053 Blast hits to 1004 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 478; Fungi - 143; Plants - 250; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). | GO:0016021|integral to membrane;GO:0005794|Golgi apparatus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1272:rna-TAV2_LOCUS17286,rna-TAV2_LOCUS16467 | AT3G59210 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1274:rna-TAV2_LOCUS17310,rna-TAV2_LOCUS17308 | AT3G58580||AT3G58560 | endonuclease/exonuclease/phosphatase family protein||hydrolase | GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1275:rna-TAV2_LOCUS17322,rna-TAV2_LOCUS16172 | AT1G75410||AT1G75430 | BLH3; BLH3 (BEL1-LIKE HOMEODOMAIN 3); DNA binding / transcription factor||BLH11; BLH11 (BEL1-LIKE HOMEODOMAIN 11); transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1277:rna-TAV2_LOCUS17379,rna-TAV2_LOCUS17381 | AT3G45460 | zinc ion binding | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0008270|zinc ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1278:rna-TAV2_LOCUS17397,rna-TAV2_LOCUS17392 | AT1G72970||AT1G73050 | (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative||HTH, EDA17; HTH (HOTHEAD); FAD binding / aldehyde-lyase/ mandelonitrile lyase | GO:0005576|extracellular region;GO:0016832|aldehyde-lyase activity;GO:0009553|embryo sac development;GO:0016614|oxidoreductase activity, acting on CH-OH group of donors;GO:0007267|cell-cell signaling;GO:0050660|FAD binding;GO:0012505|endomembrane system;GO:0046202|cyanide biosynthetic process;GO:0046593|mandelonitrile lyase activity;GO:0006952|defense response;GO:0010430|fatty acid omega-oxidation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1279:rna-TAV2_LOCUS17436,rna-TAV2_LOCUS17437 | AT3G55005||AT3G55000 | TON1B; TON1B (tonneau 1b)||TON1A, TON1; TON1A (TONNEAU 1) | GO:0000226|microtubule cytoskeleton organization;GO:0005886|plasma membrane;GO:0005792|microsome;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1280:rna-TAV2_LOCUS17450,rna-TAV2_LOCUS17452 | AT1G70060 | SNL4; SNL4 (SIN3-LIKE 4) | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1281:rna-TAV2_LOCUS17478,rna-TAV2_LOCUS17476 | AT3G56580||AT3G56520 | zinc finger (C3HC4-type RING finger) family protein||no apical meristem (NAM) family protein | GO:0005515|protein binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0008270|zinc ion binding;GO:0007275|multicellular organismal development;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1282:rna-TAV2_LOCUS17498,rna-TAV2_LOCUS17500 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1283:rna-TAV2_LOCUS17508,rna-TAV2_LOCUS16308 | AT3G56700 | FAR6; FAR6 (FATTY ACID REDUCTASE 6); fatty acyl-CoA reductase (alcohol-forming)/ oxidoreductase, acting on the CH-CH group of donors, NAD or NADP as acceptor | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0009556|microsporogenesis;GO:0016628|oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1286:rna-TAV2_LOCUS17649,rna-TAV2_LOCUS17658 | AT3G57970 | emsy N terminus domain-containing protein / ENT domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1289:rna-TAV2_LOCUS17727,rna-TAV2_LOCUS15752 | AT1G68580 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein | GO:0005575|cellular_component;GO:0003723|RNA binding;GO:0008150|biological_process;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1291:rna-TAV2_LOCUS17749,rna-TAV2_LOCUS17752 | AT3G54760 | dentin sialophosphoprotein-related | GO:0005829|cytosol;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1292:rna-TAV2_LOCUS17758,rna-TAV2_LOCUS17757 | AT3G49020||AT2G04230 | F-box family protein | GO:0005634|nucleus;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1293:rna-TAV2_LOCUS17787,rna-TAV2_LOCUS17791 | AT3G47570||AT3G47090 | leucine-rich repeat transmembrane protein kinase, putative | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1294:rna-TAV2_LOCUS17852,rna-TAV2_LOCUS17853 | AT3G50740 | UGT72E1; UGT72E1 (UDP-glucosyl transferase 72E1); UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0009808|lignin metabolic process;GO:0008194|UDP-glycosyltransferase activity;GO:0047209|coniferyl-alcohol glucosyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1295:rna-TAV2_LOCUS17861,rna-TAV2_LOCUS15703 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1296:rna-TAV2_LOCUS17873,rna-TAV2_LOCUS15635 | AT3G46160||AT3G45670 | protein kinase-related | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1297:rna-TAV2_LOCUS17888,rna-TAV2_LOCUS17886 | AT1G72110 | unknown protein | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1299:rna-TAV2_LOCUS17955,rna-TAV2_LOCUS17954 | AT1G75950 | SKP1, ASK1, ATSKP1, SKP1A, UIP1; SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1); protein binding / ubiquitin-protein ligase | GO:0007140|male meiosis;GO:0046686|response to cadmium ion;GO:0005819|spindle;GO:0005515|protein binding;GO:0009524|phragmoplast;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0004842|ubiquitin-protein ligase activity;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0007067|mitosis;GO:0045910|negative regulation of DNA recombination;GO:0019005|SCF ubiquitin ligase complex;GO:0000151|ubiquitin ligase complex;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1300:rna-TAV2_LOCUS17963,rna-TAV2_LOCUS17962 | AT1G73066||AT1G73080 | PEPR1; PEPR1 (PEP1 receptor 1); ATP binding / kinase/ protein binding / protein serine/threonine kinase||protein binding | GO:0016301|kinase activity;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0008150|biological_process;GO:0006468|protein amino acid phosphorylation;GO:0009753|response to jasmonic acid stimulus;GO:0004674|protein serine/threonine kinase activity;GO:0009611|response to wounding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1301:rna-TAV2_LOCUS17984,rna-TAV2_LOCUS17555 | AT3G52520 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1304:rna-TAV2_LOCUS18043,rna-TAV2_LOCUS18044 | AT3G53160||AT3G53150 | UGT73D1; UGT73D1 (UDP-glucosyl transferase 73D1); UDP-glycosyltransferase/ transferase, transferring hexosyl groups||UGT73C7; UGT73C7 (UDP-glucosyl transferase 73C7); UDP-glycosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0051707|response to other organism;GO:0012505|endomembrane system;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1305:rna-TAV2_LOCUS18061,rna-TAV2_LOCUS16112 | AT3G44910 | ATCHX12, CHX12; ATCHX12; monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0015385|sodium:hydrogen antiporter activity;GO:0016021|integral to membrane;GO:0006812|cation transport;GO:0005451|monovalent cation:hydrogen antiporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1307:rna-TAV2_LOCUS18138,rna-TAV2_LOCUS18144 | AT3G09120 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1308:rna-TAV2_LOCUS18139,rna-TAV2_LOCUS18145 | AT1G70160 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1309:rna-TAV2_LOCUS18158,rna-TAV2_LOCUS18155 | AT3G22650||AT3G21410 | ATSFL61, SFL61, CEG; CEG (CEGENDUO)||F-box family protein (FBW1) | GO:0003674|molecular_function;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0009733|response to auxin stimulus;GO:0004842|ubiquitin-protein ligase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0010311|lateral root formation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1310:rna-TAV2_LOCUS18164,rna-TAV2_LOCUS18162 | AT3G49210 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1311:rna-TAV2_LOCUS18191,rna-TAV2_LOCUS18190 | AT1G71390||AT3G05370 | AtRLP11; AtRLP11 (Receptor Like Protein 11); protein binding||AtRLP31; AtRLP31 (Receptor Like Protein 31); kinase/ protein binding | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1312:rna-TAV2_LOCUS18202,rna-TAV2_LOCUS18203 | AT3G54530||AT3G54520 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1313:rna-TAV2_LOCUS18222,rna-TAV2_LOCUS18221 | AT3G46490||AT3G46500 | iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors||oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016491|oxidoreductase activity;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0019748|secondary metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1314:rna-TAV2_LOCUS18247,rna-TAV2_LOCUS17895 | AT5G15380||AT1G69523 | UbiE/COQ5 methyltransferase family protein||DRM1; DRM1 (domains rearranged methylase 1); DNA (cytosine-5-)-methyltransferase | GO:0006306|DNA methylation;GO:0008152|metabolic process;GO:0003886|DNA (cytosine-5-)-methyltransferase activity;GO:0006346|methylation-dependent chromatin silencing;GO:0005575|cellular_component;GO:0008168|methyltransferase activity;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1315:rna-TAV2_LOCUS18272,rna-TAV2_LOCUS16644 | AT1G69818 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1318:rna-TAV2_LOCUS18492,rna-TAV2_LOCUS21954 | AT5G18360||AT5G17880 | CSA1; CSA1 (constitutive shade-avoidance1); ATP binding / transmembrane receptor||disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0042742|defense response to bacterium;GO:0010114|response to red light;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0009416|response to light stimulus;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0009507|chloroplast;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1321:rna-TAV2_LOCUS18539,rna-TAV2_LOCUS18544 | AT4G03490||AT4G03480 | protein binding | GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1323:rna-TAV2_LOCUS18579,rna-TAV2_LOCUS19111 | AT5G38440 | self-incompatibility protein-related | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1324:rna-TAV2_LOCUS18611,rna-TAV2_LOCUS18614 | AT1G54385 | binding | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1325:rna-TAV2_LOCUS18634,rna-TAV2_LOCUS18632 | AT5G48350 | nucleic acid binding | GO:0008150|biological_process;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1326:rna-TAV2_LOCUS18635,rna-TAV2_LOCUS18633 | AT5G53910 | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1327:rna-TAV2_LOCUS18664,rna-TAV2_LOCUS18661 | AT5G59310 | LTP4; LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding | GO:0009737|response to abscisic acid stimulus;GO:0008289|lipid binding;GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0009414|response to water deprivation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1329:rna-TAV2_LOCUS18718,rna-TAV2_LOCUS18717 | AT5G22770||AT5G22780 | alpha-ADR; alpha-ADR (alpha-adaptin); binding / protein binding / protein transporter||adaptin family protein | GO:0005488|binding;GO:0005515|protein binding;GO:0016020|membrane;GO:0006886|intracellular protein transport;GO:0016192|vesicle-mediated transport;GO:0005886|plasma membrane;GO:0015031|protein transport;GO:0008565|protein transporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1330:rna-TAV2_LOCUS18756,rna-TAV2_LOCUS18759 | AT5G15350 | plastocyanin-like domain-containing protein | GO:0005773|vacuole;GO:0005507|copper ion binding;GO:0046658|anchored to plasma membrane;GO:0005886|plasma membrane;GO:0031225|anchored to membrane;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1331:rna-TAV2_LOCUS18782,rna-TAV2_LOCUS18780 | AT5G60110 | APUM18; APUM18 (Arabidopsis Pumilio 18); RNA binding / binding | GO:0005737|cytoplasm;GO:0005488|binding;GO:0003723|RNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1332:rna-TAV2_LOCUS18794,rna-TAV2_LOCUS21292 | AT5G21105||AT5G21100 | L-ascorbate oxidase, putative||L-ascorbate oxidase/ copper ion binding / oxidoreductase | GO:0005507|copper ion binding;GO:0016491|oxidoreductase activity;GO:0055114|oxidation reduction;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0008447|L-ascorbate oxidase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1336:rna-TAV2_LOCUS18886,rna-TAV2_LOCUS18885 | AT5G56780 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1337:rna-TAV2_LOCUS18902,rna-TAV2_LOCUS18903 | AT5G56250||AT5G56240 | HAP8; HAP8 (HAPLESS 8)||INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: HAP8 (HAPLESS 8) (TAIR:AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species: Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | GO:0009507|chloroplast;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1338:rna-TAV2_LOCUS18915,rna-TAV2_LOCUS18914 | AT5G07390 | ATRBOHA; ATRBOHA (respiratory burst oxidase homolog A); calcium ion binding | GO:0031226|intrinsic to plasma membrane;GO:0006952|defense response;GO:0005509|calcium ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1340:rna-TAV2_LOCUS18955,rna-TAV2_LOCUS19043 | AT5G59260 | lectin protein kinase, putative | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1342:rna-TAV2_LOCUS19020,rna-TAV2_LOCUS19015 | AT2G29580 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein | GO:0000166|nucleotide binding;GO:0008270|zinc ion binding;GO:0003723|RNA binding;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1345:rna-TAV2_LOCUS19087,rna-TAV2_LOCUS19096 | AT5G60530||AT5G60520 | late embryogenesis abundant protein-related / LEA protein-related | GO:0012505|endomembrane system;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1346:rna-TAV2_LOCUS19104,rna-TAV2_LOCUS19105 | AT5G09280 | pectate lyase family protein | GO:0030570|pectate lyase activity;GO:0016829|lyase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1348:rna-TAV2_LOCUS19141,rna-TAV2_LOCUS19143 | AT5G04045 | Expressed protein | GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1350:rna-TAV2_LOCUS19185,rna-TAV2_LOCUS19189 | AT5G50160 | ATFRO8, FRO8; FRO8 (FERRIC REDUCTION OXIDASE 8); ferric-chelate reductase/ oxidoreductase | GO:0016491|oxidoreductase activity;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0000293|ferric-chelate reductase activity;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1352:rna-TAV2_LOCUS19206,rna-TAV2_LOCUS19208 | AT5G22150 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1354:rna-TAV2_LOCUS19265,rna-TAV2_LOCUS19409 | AT4G11120 | translation elongation factor Ts (EF-Ts), putative | GO:0005739|mitochondrion;GO:0003746|translation elongation factor activity;GO:0006414|translational elongation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1356:rna-TAV2_LOCUS19315,rna-TAV2_LOCUS19316 | AT4G04190 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1358:rna-TAV2_LOCUS19340,rna-TAV2_LOCUS19339 | AT5G12460 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: fringe-related protein (TAIR:AT2G37730.1); Has 355 Blast hits to 351 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 121; Plants - 131; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1360:rna-TAV2_LOCUS19364,rna-TAV2_LOCUS19360 | AT5G04730||AT5G04700 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04680.1); Has 868 Blast hits to 744 proteins in 75 species: Archae - 0; Bacteria - 22; Metazoa - 164; Fungi - 15; Plants - 471; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1361:rna-TAV2_LOCUS19377,rna-TAV2_LOCUS19375 | AT5G49660||AT5G49760 | leucine-rich repeat transmembrane protein kinase, putative||leucine-rich repeat family protein / protein kinase family protein | GO:0005773|vacuole;GO:0016301|kinase activity;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1362:rna-TAV2_LOCUS19389,rna-TAV2_LOCUS19388 | AT5G20510 | AL5; AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0035064|methylated histone residue binding;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1364:rna-TAV2_LOCUS19398,rna-TAV2_LOCUS18588 | AT5G07980||AT5G07940 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G07980.1); Has 1902 Blast hits to 1005 proteins in 152 species: Archae - 2; Bacteria - 147; Metazoa - 535; Fungi - 166; Plants - 86; Viruses - 0; Other Eukaryotes - 966 (source: NCBI BLink).||dentin sialophosphoprotein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1365:rna-TAV2_LOCUS19400,rna-TAV2_LOCUS21962 | AT4G08510 | unknown protein | GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1367:rna-TAV2_LOCUS19435,rna-TAV2_LOCUS19049 | AT5G52300 | RD29B, LTI65; LTI65 (LOW-TEMPERATURE-INDUCED 65) | GO:0009737|response to abscisic acid stimulus;GO:0003674|molecular_function;GO:0009738|abscisic acid mediated signaling pathway;GO:0009409|response to cold;GO:0009414|response to water deprivation;GO:0005575|cellular_component;GO:0009651|response to salt stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1368:rna-TAV2_LOCUS19453,rna-TAV2_LOCUS19236 | AT5G03495 | nucleotide binding | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1369:rna-TAV2_LOCUS19482,rna-TAV2_LOCUS19483 | AT4G00780||AT4G01390 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: stem, cotyledon, hypocotyl, root, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT4G00780.1); Has 248 Blast hits to 240 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).||meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1370:rna-TAV2_LOCUS19514,rna-TAV2_LOCUS19515 | AT5G54990 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1372:rna-TAV2_LOCUS19575,rna-TAV2_LOCUS19578 | AT5G56560 | F-box family protein | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1373:rna-TAV2_LOCUS19590,rna-TAV2_LOCUS19592 | AT5G58160 | actin binding | GO:0003779|actin binding;GO:0030036|actin cytoskeleton organization;GO:0016043|cellular component organization | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1376:rna-TAV2_LOCUS19677,rna-TAV2_LOCUS21182 | AT4G00590 | asparaginase 2 family protein | GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1380:rna-TAV2_LOCUS19689,rna-TAV2_LOCUS19695 | AT5G22500 | FAR1; FAR1 (FATTY ACID REDUCTASE 1); fatty acyl-CoA reductase (alcohol-forming)/ oxidoreductase, acting on the CH-CH group of donors | GO:0009507|chloroplast;GO:0008152|metabolic process;GO:0009556|microsporogenesis;GO:0016627|oxidoreductase activity, acting on the CH-CH group of donors | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1381:rna-TAV2_LOCUS19700,rna-TAV2_LOCUS19706 | AT5G03480 | nucleic acid binding / nucleotide binding | GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0008150|biological_process;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1382:rna-TAV2_LOCUS19722,rna-TAV2_LOCUS19723 | AT5G19315 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1383:rna-TAV2_LOCUS19747,rna-TAV2_LOCUS19749 | AT5G01350 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1384:rna-TAV2_LOCUS19757,rna-TAV2_LOCUS19758 | AT4G04770 | ATABC1, LAF6, ATNAP1; ATABC1 (ATP BINDING CASSETTE PROTEIN 1); ATPase, coupled to transmembrane movement of substances / protein binding / transporter | GO:0009639|response to red or far red light;GO:0005515|protein binding;GO:0006879|cellular iron ion homeostasis;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0016226|iron-sulfur cluster assembly;GO:0005215|transporter activity;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1385:rna-TAV2_LOCUS19770,rna-TAV2_LOCUS20828 | AT1G43730||AT4G05095 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04650.1); Has 562 Blast hits to 549 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 562; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1386:rna-TAV2_LOCUS19774,rna-TAV2_LOCUS19775 | AT5G48605||AT4G08485 | Encodes a defensin-like (DEFL) family protein. | ;GO:0012505|endomembrane system;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1388:rna-TAV2_LOCUS19782,rna-TAV2_LOCUS19783 | AT5G59920 | ULI3; ULI3; diacylglycerol binding / heme binding | GO:0010224|response to UV-B;GO:0019992|diacylglycerol binding;GO:0005737|cytoplasm;GO:0020037|heme binding;GO:0009411|response to UV | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1391:rna-TAV2_LOCUS19814,rna-TAV2_LOCUS20003 | AT4G12010||AT4G12020 | disease resistance protein (TIR-NBS-LRR class), putative||WRKY19, ATWRKY19, MAPKKK11; WRKY19; transcription factor | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0009941|chloroplast envelope;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0006468|protein amino acid phosphorylation;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1392:rna-TAV2_LOCUS19823,rna-TAV2_LOCUS19822 | AT5G54820||AT1G56400 | F-box family protein | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1393:rna-TAV2_LOCUS19825,rna-TAV2_LOCUS19832 | AT2G27780 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: TFIIS N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27310.1); Has 511 Blast hits to 423 proteins in 85 species: Archae - 2; Bacteria - 45; Metazoa - 110; Fungi - 23; Plants - 63; Viruses - 2; Other Eukaryotes - 266 (source: NCBI BLink). | GO:0005634|nucleus;GO:0006350|transcription;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1394:rna-TAV2_LOCUS19833,rna-TAV2_LOCUS21673 | AT4G11640 | ATSR; ATSR (ARABIDOPSIS THALIANA SERINE RACEMASE); serine racemase | GO:0009069|serine family amino acid metabolic process;GO:0030378|serine racemase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1395:rna-TAV2_LOCUS19860,rna-TAV2_LOCUS19859 | AT5G13620 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1397:rna-TAV2_LOCUS19895,rna-TAV2_LOCUS19381 | AT4G12360 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0031225|anchored to membrane;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1398:rna-TAV2_LOCUS19908,rna-TAV2_LOCUS19911 | AT5G56075 | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | GO:0006412|translation;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0006432|phenylalanyl-tRNA aminoacylation;GO:0000166|nucleotide binding;GO:0004826|phenylalanine-tRNA ligase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1399:rna-TAV2_LOCUS19924,rna-TAV2_LOCUS21177 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1401:rna-TAV2_LOCUS19928,rna-TAV2_LOCUS19927 | AT5G17340 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1402:rna-TAV2_LOCUS19967,rna-TAV2_LOCUS19968 | AT5G05880 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1404:rna-TAV2_LOCUS20070,rna-TAV2_LOCUS20072 | AT4G09950||AT4G09940 | avirulence-responsive family protein / avirulence induced gene (AIG1) family protein | GO:0005525|GTP binding;GO:0009617|response to bacterium;GO:0005575|cellular_component;GO:0005886|plasma membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1405:rna-TAV2_LOCUS20118,rna-TAV2_LOCUS20120 | AT5G22640||AT3G44750 | HD2A, ATHD2A, HDA3, HDT1; HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding||emb1211; emb1211 (embryo defective 1211) | GO:0009294|DNA mediated transformation;GO:0003674|molecular_function;GO:0009535|chloroplast thylakoid membrane;GO:0003676|nucleic acid binding;GO:0005730|nucleolus;GO:0009944|polarity specification of adaxial/abaxial axis;GO:0009941|chloroplast envelope;GO:0004407|histone deacetylase activity;GO:0008270|zinc ion binding;GO:0009793|embryonic development ending in seed dormancy;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1409:rna-TAV2_LOCUS20174,rna-TAV2_LOCUS20770 | AT5G01990 | auxin efflux carrier family protein | GO:0016021|integral to membrane;GO:0009926|auxin polar transport;GO:0009672|auxin:hydrogen symporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1410:rna-TAV2_LOCUS20175,rna-TAV2_LOCUS20773 | AT5G01970 | unknown protein | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1411:rna-TAV2_LOCUS20179,rna-TAV2_LOCUS20772 | AT5G01960 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0009507|chloroplast;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1412:rna-TAV2_LOCUS20180,rna-TAV2_LOCUS20769 | AT3G08570 | protein binding / signal transducer | GO:0009507|chloroplast;GO:0004871|signal transducer activity;GO:0009416|response to light stimulus;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1413:rna-TAV2_LOCUS20183,rna-TAV2_LOCUS19986 | AT5G60110 | APUM18; APUM18 (Arabidopsis Pumilio 18); RNA binding / binding | GO:0005737|cytoplasm;GO:0005488|binding;GO:0003723|RNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1414:rna-TAV2_LOCUS20210,rna-TAV2_LOCUS20209 | AT5G11200 | DEAD/DEAH box helicase, putative | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0005524|ATP binding;GO:0005618|cell wall;GO:0008150|biological_process;GO:0008026|ATP-dependent helicase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1416:rna-TAV2_LOCUS20219,rna-TAV2_LOCUS20228 | AT1G09830 | phosphoribosylamine--glycine ligase (PUR2) | GO:0009507|chloroplast;GO:0006164|purine nucleotide biosynthetic process;GO:0004637|phosphoribosylamine-glycine ligase activity;GO:0009113|purine base biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1418:rna-TAV2_LOCUS20315,rna-TAV2_LOCUS20314 | AT5G51790||AT5G51780 | basix helix-loop-helix (bHLH) family protein | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1420:rna-TAV2_LOCUS20363,rna-TAV2_LOCUS20364 | AT3G05490 | RALFL22; RALFL22 (ralf-like 22); signal transducer | GO:0004871|signal transducer activity;GO:0007267|cell-cell signaling;GO:0048046|apoplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1422:rna-TAV2_LOCUS20419,rna-TAV2_LOCUS22152 | AT4G03070||AT4G03050 | AOP3; AOP3; iron ion binding / oxidoreductase||AOP1, AOP, AOP1.1; AOP1; oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | GO:0016491|oxidoreductase activity;GO:0016020|membrane;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0019761|glucosinolate biosynthetic process;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1423:rna-TAV2_LOCUS20427,rna-TAV2_LOCUS20927 | AT5G07690||AT5G07700 | MYB76, AtMYB76; MYB76 (myb domain protein 76); DNA binding / transcription factor||MYB29, ATMYB29, PMG2; ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29); DNA binding / transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0009739|response to gibberellin stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0010438|cellular response to sulfur starvation;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0010439|regulation of glucosinolate biosynthetic process;GO:0009753|response to jasmonic acid stimulus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1425:rna-TAV2_LOCUS20460,rna-TAV2_LOCUS20458 | AT5G14170 | CHC1; CHC1 | GO:0048364|root development;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1427:rna-TAV2_LOCUS20509,rna-TAV2_LOCUS20771 | AT2G38640 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1428:rna-TAV2_LOCUS20528,rna-TAV2_LOCUS20013 | AT5G59030||AT5G59040 | COPT1; COPT1 (copper transporter 1); copper ion transmembrane transporter||COPT3; COPT3; copper ion transmembrane transporter/ high affinity copper ion transmembrane transporter | GO:0005375|copper ion transmembrane transporter activity;GO:0016020|membrane;GO:0048364|root development;GO:0016021|integral to membrane;GO:0048235|pollen sperm cell differentiation;GO:0015089|high affinity copper ion transmembrane transporter activity;GO:0006825|copper ion transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1430:rna-TAV2_LOCUS20536,rna-TAV2_LOCUS20535 | AT5G35190||AT4G08400 | proline-rich extensin-like family protein | GO:0012505|endomembrane system;GO:0005199|structural constituent of cell wall;GO:0005575|cellular_component;GO:0009664|plant-type cell wall organization | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1431:rna-TAV2_LOCUS20549,rna-TAV2_LOCUS20550 | AT5G60170 | RNA binding / nucleic acid binding / nucleotide binding / protein binding / zinc ion binding | GO:0003723|RNA binding;GO:0005515|protein binding;GO:0003676|nucleic acid binding;GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1432:rna-TAV2_LOCUS20553,rna-TAV2_LOCUS20551 | AT5G11412 | nucleic acid binding / nucleotide binding | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1433:rna-TAV2_LOCUS20556,rna-TAV2_LOCUS20557 | AT5G60600 | GCPE, ISPG, CSB3, CLB4, HDS; HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE); 4 iron, 4 sulfur cluster binding / 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | GO:0009570|chloroplast stroma;GO:0009941|chloroplast envelope | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1434:rna-TAV2_LOCUS20576,rna-TAV2_LOCUS19393 | AT5G20570 | ROC1, RBX1, HRT1, ATRBX1; RBX1 (RING-BOX 1); protein binding | GO:0031463|Cul3-RING ubiquitin ligase complex;GO:0016567|protein ubiquitination;GO:0005515|protein binding;GO:0009733|response to auxin stimulus;GO:0019005|SCF ubiquitin ligase complex | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1435:rna-TAV2_LOCUS20584,rna-TAV2_LOCUS20580 | AT5G20680||AT5G20590 | unknown protein | GO:0012505|endomembrane system;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1436:rna-TAV2_LOCUS20615,rna-TAV2_LOCUS20614 | AT4G01550 | anac069; anac069 (Arabidopsis NAC domain containing protein 69); transcription factor | GO:0007275|multicellular organismal development;GO:0005575|cellular_component;GO:0045449|regulation of transcription;GO:0003700|transcription factor activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1438:rna-TAV2_LOCUS20685,rna-TAV2_LOCUS20683 | AT4G10490||AT4G10500 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0005575|cellular_component;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0016491|oxidoreductase activity;GO:0019748|secondary metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1439:rna-TAV2_LOCUS20692,rna-TAV2_LOCUS20689 | AT4G08040 | ACS11; ACS11; 1-aminocyclopropane-1-carboxylate synthase | GO:0009058|biosynthetic process;GO:0016847|1-aminocyclopropane-1-carboxylate synthase activity;GO:0005575|cellular_component;GO:0009693|ethylene biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1440:rna-TAV2_LOCUS20714,rna-TAV2_LOCUS20717 | AT5G22260 | MS1; MS1 (male sterility 1); DNA binding / transcription factor | GO:0009556|microsporogenesis;GO:0010208|pollen wall assembly;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0009846|pollen germination;GO:0048655|tapetal layer morphogenesis;GO:0055046|microgametogenesis;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1444:rna-TAV2_LOCUS20814,rna-TAV2_LOCUS20815 | AT5G18770 | F-box family protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1445:rna-TAV2_LOCUS20870,rna-TAV2_LOCUS20871 | AT5G49930 | emb1441; emb1441 (embryo defective 1441); nucleic acid binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1447:rna-TAV2_LOCUS20947,rna-TAV2_LOCUS21685 | AT5G51500||AT5G51490 | pectinesterase family protein | GO:0004857|enzyme inhibitor activity;GO:0042545|cell wall modification;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1448:rna-TAV2_LOCUS21063,rna-TAV2_LOCUS21065 | AT5G52020||AT5G51990 | CBF4, DREB1D; CBF4 (C- REPEAT-BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor||AP2 domain-containing protein | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0050832|defense response to fungus;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1449:rna-TAV2_LOCUS21145,rna-TAV2_LOCUS21140 | AT5G11920 | AtcwINV6; AtcwINV6 (6-&1-fructan exohydrolase); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase | GO:0031219|levanase activity;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0051670|inulinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1450:rna-TAV2_LOCUS21165,rna-TAV2_LOCUS21162 | AT5G52980 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1451:rna-TAV2_LOCUS21209,rna-TAV2_LOCUS21211 | AT5G18890||AT5G18860 | inosine-uridine preferring nucleoside hydrolase family protein | GO:0005618|cell wall;GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1452:rna-TAV2_LOCUS21246,rna-TAV2_LOCUS21245 | AT5G01680||AT5G01690 | ATCHX27, CHX27; ATCHX27; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX26, CHX26; ATCHX26; monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0015385|sodium:hydrogen antiporter activity;GO:0016021|integral to membrane;GO:0006812|cation transport;GO:0005451|monovalent cation:hydrogen antiporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1453:rna-TAV2_LOCUS21284,rna-TAV2_LOCUS18781 | AT5G60250 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1456:rna-TAV2_LOCUS21430,rna-TAV2_LOCUS19086 | AT5G53637 | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1457:rna-TAV2_LOCUS21432,rna-TAV2_LOCUS21431 | AT2G13900 | DC1 domain-containing protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1458:rna-TAV2_LOCUS21435,rna-TAV2_LOCUS20538 | AT5G12070 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: self-incompatibility protein-related (TAIR:AT5G12060.1); Has 77 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1459:rna-TAV2_LOCUS21452,rna-TAV2_LOCUS19008 | AT5G19990 | RPT6A, ATSUG1; RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase | GO:0008540|proteasome regulatory particle, base subcomplex;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0016887|ATPase activity;GO:0005886|plasma membrane;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1462:rna-TAV2_LOCUS21554,rna-TAV2_LOCUS21609 | AT5G55350 | membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related | GO:0008415|acyltransferase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1464:rna-TAV2_LOCUS21642,rna-TAV2_LOCUS21643 | AT5G59490||AT5G59480 | haloacid dehalogenase-like hydrolase family protein | GO:0008152|metabolic process;GO:0016787|hydrolase activity;GO:0005575|cellular_component;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1465:rna-TAV2_LOCUS21651,rna-TAV2_LOCUS22334 | AT5G60490 | FLA12; FLA12 | GO:0005886|plasma membrane;GO:0031225|anchored to membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1466:rna-TAV2_LOCUS21652,rna-TAV2_LOCUS21653 | AT1G65985 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1467:rna-TAV2_LOCUS21676,rna-TAV2_LOCUS21677 | AT4G11650 | ATOSM34; ATOSM34 (osmotin 34) | GO:0009816|defense response to bacterium, incompatible interaction;GO:0012505|endomembrane system;GO:0051707|response to other organism;GO:0009817|defense response to fungus, incompatible interaction;GO:0009651|response to salt stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1468:rna-TAV2_LOCUS21694,rna-TAV2_LOCUS21475 | AT5G38570||AT5G56410 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1469:rna-TAV2_LOCUS21737,rna-TAV2_LOCUS21739 | AT4G00210||AT4G00220 | LBD31; LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)||LBD30, JLO; JLO (JAGGED LATERAL ORGANS) | GO:0010199|organ boundary specification between lateral organs and the meristem;GO:0010089|xylem development;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1470:rna-TAV2_LOCUS21768,rna-TAV2_LOCUS21769 | AT4G08840 | APUM11; APUM11 (Arabidopsis Pumilio 11); RNA binding / binding | GO:0005575|cellular_component;GO:0005488|binding;GO:0003723|RNA binding;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1472:rna-TAV2_LOCUS21842,rna-TAV2_LOCUS21845 | AT4G10280||AT4G10290 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10290.1); Has 293 Blast hits to 293 proteins in 74 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10280.1); Has 242 Blast hits to 242 proteins in 52 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1473:rna-TAV2_LOCUS21844,rna-TAV2_LOCUS21847 | AT4G10300 | FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04300.1); Has 356 Blast hits to 356 proteins in 93 species: Archae - 0; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). | GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1475:rna-TAV2_LOCUS21881,rna-TAV2_LOCUS21883 | AT5G53620 | unknown protein | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1476:rna-TAV2_LOCUS21911,rna-TAV2_LOCUS21912 | AT3G62050 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 114 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1477:rna-TAV2_LOCUS21939,rna-TAV2_LOCUS21940 | AT3G26550 | DC1 domain-containing protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1478:rna-TAV2_LOCUS21951,rna-TAV2_LOCUS19445 | AT5G17780||AT5G17720 | hydrolase, alpha/beta fold family protein | GO:0012505|endomembrane system;GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1480:rna-TAV2_LOCUS22022,rna-TAV2_LOCUS22021 | AT5G11410 | protein kinase family protein | GO:0005524|ATP binding;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1483:rna-TAV2_LOCUS22125,rna-TAV2_LOCUS20671 | AT5G14930 | SAG101; SAG101 (SENESCENCE-ASSOCIATED GENE 101); carboxylesterase/ triacylglycerol lipase | GO:0004091|carboxylesterase activity;GO:0007568|aging;GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1484:rna-TAV2_LOCUS22162,rna-TAV2_LOCUS22161 | AT5G22310 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1485:rna-TAV2_LOCUS22204,rna-TAV2_LOCUS22203 | AT5G06811||AT5G06810 | ||mitochondrial transcription termination factor-related / mTERF-related | ;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1486:rna-TAV2_LOCUS22226,rna-TAV2_LOCUS22227 | AT3G25080 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1487:rna-TAV2_LOCUS22251,rna-TAV2_LOCUS19688 | AT5G22550||AT5G22540 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1490:rna-TAV2_LOCUS22265,rna-TAV2_LOCUS22264 | AT5G49665 | zinc finger (C3HC4-type RING finger) family protein | GO:0004842|ubiquitin-protein ligase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1491:rna-TAV2_LOCUS22317,rna-TAV2_LOCUS22316 | AT5G55440 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1492:rna-TAV2_LOCUS22501,rna-TAV2_LOCUS22500 | AT5G41190||AT4G21380 | ARK3; ARK3 (A. THALIANA RECEPTOR KINASE 3); kinase/ transmembrane receptor protein serine/threonine kinase||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881), D-site 20S pre-rRNA nuclease (InterPro:IPR017117); Has 855 Blast hits to 653 proteins in 196 species: Archae - 53; Bacteria - 16; Metazoa - 335; Fungi - 168; Plants - 29; Viruses - 10; Other Eukaryotes - 244 (source: NCBI BLink). | GO:0005773|vacuole;GO:0016301|kinase activity;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004675|transmembrane receptor protein serine/threonine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1494:rna-TAV2_LOCUS22584,rna-TAV2_LOCUS24102 | AT4G25520||AT4G25515 | SLK1; SLK1 (SEUSS-LIKE 1); transcription regulator||SLK3; SLK3 (SEUSS-LIKE 3); transcription regulator | GO:0009790|embryonic development;GO:0030528|transcription regulator activity;GO:0048481|ovule development;GO:0048467|gynoecium development | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1495:rna-TAV2_LOCUS22608,rna-TAV2_LOCUS23110 | AT4G37150 | ATMES9, MES9; MES9 (METHYL ESTERASE 9); hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase/ methyl salicylate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0009696|salicylic acid metabolic process;GO:0009817|defense response to fungus, incompatible interaction;GO:0009694|jasmonic acid metabolic process;GO:0009627|systemic acquired resistance | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1496:rna-TAV2_LOCUS22625,rna-TAV2_LOCUS24013 | AT4G23060 | IQD22; IQD22 (IQ-domain 22); calmodulin binding | GO:0005516|calmodulin binding;GO:0009739|response to gibberellin stimulus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1497:rna-TAV2_LOCUS22685,rna-TAV2_LOCUS22680 | AT2G21950||AT4G39550 | kelch repeat-containing F-box family protein||SKIP6; SKIP6 (SKP1 interacting partner 6); ubiquitin-protein ligase | GO:0003674|molecular_function;GO:0004842|ubiquitin-protein ligase activity;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1500:rna-TAV2_LOCUS22784,rna-TAV2_LOCUS22785 | AT4G15970 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1501:rna-TAV2_LOCUS22790,rna-TAV2_LOCUS22789 | AT4G15990 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1502:rna-TAV2_LOCUS22813,rna-TAV2_LOCUS22812 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1503:rna-TAV2_LOCUS22821,rna-TAV2_LOCUS24981 | AT4G14250||AT4G14245 | ||structural constituent of ribosome | ;GO:0005840|ribosome;GO:0006412|translation;GO:0003735|structural constituent of ribosome;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1506:rna-TAV2_LOCUS22908,rna-TAV2_LOCUS25862 | AT4G22517||AT4G22513 | Encodes a Protease inhibitor/seed storage/LTP family protein | GO:0012505|endomembrane system;GO:0006869|lipid transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1507:rna-TAV2_LOCUS22969,rna-TAV2_LOCUS22964 | AT4G16690 | ATMES16, MES16; MES16 (METHYL ESTERASE 16); catalytic/ hydrolase, acting on ester bonds / methyl indole-3-acetate esterase/ methyl jasmonate esterase | GO:0016788|hydrolase activity, acting on ester bonds;GO:0005575|cellular_component;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1508:rna-TAV2_LOCUS22978,rna-TAV2_LOCUS25502 | AT4G24330||AT4G24320 | ubiquitin thiolesterase||unknown protein | GO:0003674|molecular_function;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0008150|biological_process;GO:0004221|ubiquitin thiolesterase activity;GO:0005783|endoplasmic reticulum;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1509:rna-TAV2_LOCUS22991,rna-TAV2_LOCUS23674 | AT4G19930 | F-box family protein | GO:0005886|plasma membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1510:rna-TAV2_LOCUS23007,rna-TAV2_LOCUS23010 | AT4G30640 | F-box family protein (FBL19) | GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005575|cellular_component;GO:0004842|ubiquitin-protein ligase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1511:rna-TAV2_LOCUS23037,rna-TAV2_LOCUS23034 | AT5G40790||AT5G40800 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1513:rna-TAV2_LOCUS23093,rna-TAV2_LOCUS26025 | AT4G28940 | catalytic | GO:0009116|nucleoside metabolic process;GO:0012505|endomembrane system;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1515:rna-TAV2_LOCUS23134,rna-TAV2_LOCUS24217 | AT4G24520 | ATR1, AR1; ATR1 (ARABIDOPSIS P450 REDUCTASE 1); NADPH-hemoprotein reductase | GO:0005783|endoplasmic reticulum;GO:0009698|phenylpropanoid metabolic process;GO:0003958|NADPH-hemoprotein reductase activity;GO:0006979|response to oxidative stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1516:rna-TAV2_LOCUS23171,rna-TAV2_LOCUS23175 | AT5G39980 | pentatricopeptide (PPR) repeat-containing protein | GO:0009507|chloroplast;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1517:rna-TAV2_LOCUS23189,rna-TAV2_LOCUS25649 | AT5G39520||AT5G39530 | unknown protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1518:rna-TAV2_LOCUS23212,rna-TAV2_LOCUS23215 | AT4G25900 | aldose 1-epimerase family protein | GO:0003824|catalytic activity;GO:0009505|plant-type cell wall;GO:0030246|carbohydrate binding;GO:0005618|cell wall;GO:0005886|plasma membrane;GO:0004034|aldose 1-epimerase activity;GO:0006012|galactose metabolic process;GO:0005975|carbohydrate metabolic process;GO:0016853|isomerase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1519:rna-TAV2_LOCUS23219,rna-TAV2_LOCUS23225 | AT5G35080 | protein binding | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1522:rna-TAV2_LOCUS23285,rna-TAV2_LOCUS23288 | AT4G13660 | ATPRR2, PRR2; PRR2 (PINORESINOL REDUCTASE 2); pinoresinol reductase | GO:0009807|lignan biosynthetic process;GO:0005575|cellular_component;GO:0010283|pinoresinol reductase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1523:rna-TAV2_LOCUS23290,rna-TAV2_LOCUS24659 | AT4G13670 | PTAC5; PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5); heat shock protein binding / unfolded protein binding | GO:0051082|unfolded protein binding;GO:0009535|chloroplast thylakoid membrane;GO:0009508|plastid chromosome;GO:0009941|chloroplast envelope;GO:0006457|protein folding;GO:0008152|metabolic process;GO:0009507|chloroplast;GO:0009295|nucleoid;GO:0031072|heat shock protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1524:rna-TAV2_LOCUS23294,rna-TAV2_LOCUS23295 | AT4G30870 | ATMUS81, MUS81; MUS81 (MMS AND UV SENSITIVE 81); endonuclease/ nucleic acid binding | GO:0004519|endonuclease activity;GO:0003676|nucleic acid binding;GO:0006281|DNA repair;GO:0000794|condensed nuclear chromosome;GO:0006312|mitotic recombination;GO:0051026|chiasma assembly | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1525:rna-TAV2_LOCUS23327,rna-TAV2_LOCUS23333 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1526:rna-TAV2_LOCUS23353,rna-TAV2_LOCUS22624 | AT4G23070 | ATRBL7; ATRBL7 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 7) | GO:0016021|integral to membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1527:rna-TAV2_LOCUS23395,rna-TAV2_LOCUS24474 | AT4G18905||AT4G18900 | transducin family protein / WD-40 repeat family protein | GO:0000166|nucleotide binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1530:rna-TAV2_LOCUS23479,rna-TAV2_LOCUS23420 | AT3G48350 | cysteine proteinase, putative | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1531:rna-TAV2_LOCUS23489,rna-TAV2_LOCUS23490 | AT4G16740||AT4G16730 | ATTPS03; ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase||lyase/ magnesium ion binding | GO:0000287|magnesium ion binding;GO:0016829|lyase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0008152|metabolic process;GO:0050551|myrcene synthase activity;GO:0009611|response to wounding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1532:rna-TAV2_LOCUS23506,rna-TAV2_LOCUS23509 | AT4G25690||AT4G25670 | unknown protein | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1538:rna-TAV2_LOCUS23689,rna-TAV2_LOCUS23690 | AT4G36840 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: kelch repeat-containing F-box family protein (TAIR:AT3G24610.1); Has 277 Blast hits to 269 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 277; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1539:rna-TAV2_LOCUS23711,rna-TAV2_LOCUS23709 | AT5G39830 | DEGP8, DEG8; DEG8; peptidase/ serine-type peptidase | GO:0031977|thylakoid lumen;GO:0009507|chloroplast;GO:0009579|thylakoid | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1541:rna-TAV2_LOCUS23731,rna-TAV2_LOCUS25931 | AT5G38100 | methyltransferase-related | GO:0005575|cellular_component;GO:0008168|methyltransferase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1542:rna-TAV2_LOCUS23776,rna-TAV2_LOCUS23779 | AT4G18540 | unknown protein | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1544:rna-TAV2_LOCUS23788,rna-TAV2_LOCUS22924 | AT1G32330 | ATHSFA1D, HSFA1D; ATHSFA1D; DNA binding / transcription factor | GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1546:rna-TAV2_LOCUS23878,rna-TAV2_LOCUS23877 | AT4G30074 | LCR19; LCR19 (Low-molecular-weight cysteine-rich 19) | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1547:rna-TAV2_LOCUS23880,rna-TAV2_LOCUS23879 | AT2G29045 | LCR62; LCR62 (Low-molecular-weight cysteine-rich 62) | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1548:rna-TAV2_LOCUS23898,rna-TAV2_LOCUS23895 | AT4G15500||AT4G15490 | UGT84A4; UGT84A4; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups||UGT84A3; UGT84A3; UDP-glycosyltransferase/ sinapate 1-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0008152|metabolic process;GO:0005575|cellular_component;GO:0050284|sinapate 1-glucosyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1549:rna-TAV2_LOCUS23941,rna-TAV2_LOCUS23940 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1550:rna-TAV2_LOCUS23963,rna-TAV2_LOCUS23964 | AT4G14230||AT4G14240 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF21 (InterPro:IPR002550), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: CBS domain-containing protein-related (TAIR:AT4G14230.1); Has 6770 Blast hits to 6657 proteins in 1347 species: Archae - 62; Bacteria - 4461; Metazoa - 254; Fungi - 179; Plants - 121; Viruses - 0; Other Eukaryotes - 1693 (source: NCBI BLink).||CBS domain-containing protein-related | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1552:rna-TAV2_LOCUS23969,rna-TAV2_LOCUS23814 | AT4G16500 | cysteine protease inhibitor family protein / cystatin family protein | GO:0005773|vacuole;GO:0030234|enzyme regulator activity;GO:0005618|cell wall;GO:0004869|cysteine-type endopeptidase inhibitor activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1554:rna-TAV2_LOCUS24047,rna-TAV2_LOCUS24044 | AT5G66830||AT1G69090 | F-box family protein | GO:0009507|chloroplast;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1556:rna-TAV2_LOCUS24069,rna-TAV2_LOCUS24067 | AT5G39410 | binding / catalytic | GO:0005773|vacuole;GO:0005488|binding;GO:0003824|catalytic activity;GO:0016020|membrane;GO:0009941|chloroplast envelope;GO:0005886|plasma membrane;GO:0008152|metabolic process;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1557:rna-TAV2_LOCUS24085,rna-TAV2_LOCUS24086 | AT4G26010 | peroxidase, putative | GO:0012505|endomembrane system;GO:0009055|electron carrier activity;GO:0004601|peroxidase activity;GO:0020037|heme binding;GO:0006979|response to oxidative stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1560:rna-TAV2_LOCUS24155,rna-TAV2_LOCUS25787 | AT5G39960 | GTP-binding family protein | GO:0005525|GTP binding;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1562:rna-TAV2_LOCUS24170,rna-TAV2_LOCUS25831 | AT1G79680 | wall-associated kinase, putative | GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1565:rna-TAV2_LOCUS24239,rna-TAV2_LOCUS24234 | AT4G08450||AT5G17680 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1567:rna-TAV2_LOCUS24301,rna-TAV2_LOCUS24299 | AT5G39000 | protein kinase family protein | GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1568:rna-TAV2_LOCUS24303,rna-TAV2_LOCUS24302 | AT5G39010 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1570:rna-TAV2_LOCUS24363,rna-TAV2_LOCUS24362 | AT4G34920 | 1-phosphatidylinositol phosphodiesterase-related | GO:0019432|triglyceride biosynthetic process;GO:0008654|phospholipid biosynthetic process;GO:0004629|phospholipase C activity;GO:0006629|lipid metabolic process;GO:0005575|cellular_component;GO:0008081|phosphoric diester hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1573:rna-TAV2_LOCUS24397,rna-TAV2_LOCUS24396 | AT4G15290 | ATCSLB05, CSLB05, ATCSLB5; ATCSLB05; cellulose synthase/ transferase/ transferase, transferring glycosyl groups | GO:0030244|cellulose biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0000271|polysaccharide biosynthetic process;GO:0016759|cellulose synthase activity;GO:0016740|transferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1574:rna-TAV2_LOCUS24402,rna-TAV2_LOCUS22931 | AT4G36610 | hydrolase, alpha/beta fold family protein | GO:0012505|endomembrane system;GO:0016787|hydrolase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1575:rna-TAV2_LOCUS24438,rna-TAV2_LOCUS24437 | AT1G64030 | serpin family protein / serine protease inhibitor family protein | GO:0004867|serine-type endopeptidase inhibitor activity;GO:0006281|DNA repair;GO:0005829|cytosol;GO:0006974|response to DNA damage stimulus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1576:rna-TAV2_LOCUS24448,rna-TAV2_LOCUS23588 | AT2G17720||AT4G35810 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0016491|oxidoreductase activity;GO:0018401|peptidyl-proline hydroxylation to 4-hydroxy-L-proline;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0019538|protein metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1577:rna-TAV2_LOCUS24471,rna-TAV2_LOCUS24717 | AT4G18880||AT4G18870 | heat shock transcription factor family protein||AT-HSFA4A, HSF A4A; AT-HSFA4A; DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0010200|response to chitin;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1579:rna-TAV2_LOCUS24530,rna-TAV2_LOCUS24021 | AT2G25160 | CYP82F1; CYP82F1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1580:rna-TAV2_LOCUS24551,rna-TAV2_LOCUS23743 | AT4G30380 | EXLB2; EXLB2 (EXPANSIN-LIKE B2 PRECURSOR) | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1581:rna-TAV2_LOCUS24576,rna-TAV2_LOCUS25909 | AT2G07680||AT4G18050 | PGP9; PGP9 (P-GLYCOPROTEIN 9); ATPase, coupled to transmembrane movement of substances||ATMRP11; ATMRP11; ATPase, coupled to transmembrane movement of substances | GO:0005886|plasma membrane;GO:0016021|integral to membrane;GO:0042626|ATPase activity, coupled to transmembrane movement of substances;GO:0006810|transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1582:rna-TAV2_LOCUS24583,rna-TAV2_LOCUS24582 | AT4G18110 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1583:rna-TAV2_LOCUS24596,rna-TAV2_LOCUS25653 | AT4G27870||AT4G27860 | integral membrane family protein | GO:0016021|integral to membrane;GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1585:rna-TAV2_LOCUS24631,rna-TAV2_LOCUS24632 | AT4G38940 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1587:rna-TAV2_LOCUS24678,rna-TAV2_LOCUS24680 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1588:rna-TAV2_LOCUS24692,rna-TAV2_LOCUS23907 | AT4G15720 | pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1590:rna-TAV2_LOCUS24860,rna-TAV2_LOCUS24861 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1593:rna-TAV2_LOCUS24963,rna-TAV2_LOCUS25461 | AT5G39930 | CLPS5; CLPS5 (CLP1-SIMILAR PROTEIN 5) | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1594:rna-TAV2_LOCUS24995,rna-TAV2_LOCUS23613 | AT4G19600||AT4G19560 | CYCT1;2; CYCT1;2; cyclin-dependent protein kinase||CYCT1;4; CYCT1;4; cyclin-dependent protein kinase | GO:0010090|trichome morphogenesis;GO:0051726|regulation of cell cycle;GO:0048366|leaf development;GO:0005575|cellular_component;GO:0009615|response to virus;GO:0004693|cyclin-dependent protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1595:rna-TAV2_LOCUS25019,rna-TAV2_LOCUS25016 | AT4G33600||AT4G33590 | unknown protein | ;GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1597:rna-TAV2_LOCUS25090,rna-TAV2_LOCUS25089 | AT5G37890 | seven in absentia (SINA) protein, putative | GO:0016567|protein ubiquitination;GO:0005515|protein binding;GO:0006511|ubiquitin-dependent protein catabolic process;GO:0005622|intracellular;GO:0004842|ubiquitin-protein ligase activity;GO:0008270|zinc ion binding;GO:0007275|multicellular organismal development;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1598:rna-TAV2_LOCUS25097,rna-TAV2_LOCUS25655 | AT4G29750 | RNA binding | GO:0009507|chloroplast;GO:0003723|RNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1599:rna-TAV2_LOCUS25098,rna-TAV2_LOCUS24023 | AT2G25150 | transferase family protein | GO:0016740|transferase activity;GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1601:rna-TAV2_LOCUS25113,rna-TAV2_LOCUS23520 | AT4G15960||AT4G15955 | epoxide hydrolase-related||catalytic/ epoxide hydrolase | GO:0003824|catalytic activity;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0004301|epoxide hydrolase activity;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1602:rna-TAV2_LOCUS25178,rna-TAV2_LOCUS25177 | AT4G20910 | HEN1, CRM2; HEN1 (HUA ENHANCER 1); RNA methyltransferase | GO:0008173|RNA methyltransferase activity;GO:0035279|mRNA cleavage involved in gene silencing by miRNA;GO:0010093|specification of floral organ identity;GO:0035196|production of miRNAs involved in gene silencing by miRNA;GO:0005737|cytoplasm;GO:0005634|nucleus;GO:0009616|virus induced gene silencing;GO:0009909|regulation of flower development;GO:0030422|production of siRNA involved in RNA interference | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1604:rna-TAV2_LOCUS25199,rna-TAV2_LOCUS25200 | AT4G30140 | GDSL-motif lipase/hydrolase family protein | GO:0006629|lipid metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1605:rna-TAV2_LOCUS25204,rna-TAV2_LOCUS25202 | AT4G30150 | EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar 27S pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has 31 Blast hits to 27 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 19; Viruses - 3; Other Eukaryotes - 4 (source: NCBI BLink). | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1606:rna-TAV2_LOCUS25236,rna-TAV2_LOCUS25235 | AT4G35733||AT4G35730 | unknown protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box protein-related / C-type lectin-related (TAIR:AT1G44080.1); Has 92 Blast hits to 87 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1607:rna-TAV2_LOCUS25249,rna-TAV2_LOCUS25250 | AT4G22666||AT4G22640 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22666.2); Has 19 Blast hits to 19 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (TAIR:AT4G22630.1); Has 44 Blast hits to 44 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0031225|anchored to membrane;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1608:rna-TAV2_LOCUS25282,rna-TAV2_LOCUS25281 | AT4G29037 | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1610:rna-TAV2_LOCUS25318,rna-TAV2_LOCUS24844 | AT4G20050||AT4G20040 | QRT3; QRT3 (QUARTET 3); polygalacturonase||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: QRT3 (QUARTET 3); polygalacturonase (TAIR:AT4G20050.2); Has 90 Blast hits to 90 proteins in 38 species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | GO:0009556|microsporogenesis;GO:0003674|molecular_function;GO:0010584|pollen exine formation;GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0004650|polygalacturonase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1612:rna-TAV2_LOCUS25390,rna-TAV2_LOCUS25393 | AT5G11250 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0009507|chloroplast;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1614:rna-TAV2_LOCUS25416,rna-TAV2_LOCUS25819 | AT5G45510||AT4G19050 | leucine-rich repeat family protein||ATP binding / protein binding | GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0005829|cytosol;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1615:rna-TAV2_LOCUS25426,rna-TAV2_LOCUS25427 | AT4G25410||AT4G25400 | basix helix-loop-helix (bHLH) family protein||DNA binding / transcription factor | GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1616:rna-TAV2_LOCUS25445,rna-TAV2_LOCUS25444 | AT1G64255 | SWIM zinc finger family protein | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1617:rna-TAV2_LOCUS25459,rna-TAV2_LOCUS23170 | AT1G77570||AT4G19630 | DNA binding / transcription factor||heat shock factor protein-related / heat shock transcription factor-related | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0012505|endomembrane system;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1618:rna-TAV2_LOCUS25477,rna-TAV2_LOCUS22515 | AT4G15563 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1620:rna-TAV2_LOCUS25506,rna-TAV2_LOCUS25505 | AT4G24280 | cpHsc70-1; cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | GO:0046686|response to cadmium ion;GO:0009941|chloroplast envelope;GO:0009532|plastid stroma;GO:0005524|ATP binding;GO:0006457|protein folding;GO:0009409|response to cold;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0005634|nucleus;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1621:rna-TAV2_LOCUS25527,rna-TAV2_LOCUS23708 | AT5G54620 | ankyrin repeat family protein | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1623:rna-TAV2_LOCUS25564,rna-TAV2_LOCUS25856 | AT4G14746 | INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: EGF (InterPro:IPR006210); Has 201 Blast hits to 179 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 168; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0031225|anchored to membrane;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1625:rna-TAV2_LOCUS25660,rna-TAV2_LOCUS23346 | AT5G28540||AT1G70430 | BIP1; BIP1; ATP binding||protein kinase family protein | GO:0005773|vacuole;GO:0005788|endoplasmic reticulum lumen;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0009408|response to heat;GO:0006457|protein folding;GO:0010197|polar nucleus fusion;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0005575|cellular_component;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0030433|ER-associated protein catabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1627:rna-TAV2_LOCUS25692,rna-TAV2_LOCUS25693 | AT4G31100||AT4G31080 | wall-associated kinase, putative||unknown protein | GO:0016301|kinase activity;GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1630:rna-TAV2_LOCUS25734,rna-TAV2_LOCUS25729 | AT3G04540 | Encodes a defensin-like (DEFL) family protein. | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1631:rna-TAV2_LOCUS25765,rna-TAV2_LOCUS25766 | AT4G39240 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1636:rna-TAV2_LOCUS25797,rna-TAV2_LOCUS25796 | AT4G16845||AT2G35670 | FIS2, FIE2; FIS2 (FERTILIZATION INDEPENDENT SEED 2); transcription factor||VRN2; VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor | GO:0006306|DNA methylation;GO:0003700|transcription factor activity;GO:0010048|vernalization response;GO:0009409|response to cold;GO:0006349|regulation of gene expression by genetic imprinting;GO:0005634|nucleus;GO:0009960|endosperm development | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1637:rna-TAV2_LOCUS25804,rna-TAV2_LOCUS25803 | AT5G17970||AT4G16857 | ||disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1639:rna-TAV2_LOCUS25830,rna-TAV2_LOCUS23049 | AT5G39600 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1640:rna-TAV2_LOCUS25865,rna-TAV2_LOCUS25861 | AT4G22485 | Encodes a Protease inhibitor/seed storage/LTP family protein | GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1641:rna-TAV2_LOCUS25867,rna-TAV2_LOCUS25869 | AT4G25640 | MATE efflux family protein | GO:0009901|anther dehiscence;GO:0016020|membrane;GO:0015238|drug transmembrane transporter activity;GO:0009555|pollen development;GO:0005886|plasma membrane;GO:0009812|flavonoid metabolic process;GO:0015297|antiporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1643:rna-TAV2_LOCUS25923,rna-TAV2_LOCUS25922 | AT1G28430 | CYP705A24; CYP705A24; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1644:rna-TAV2_LOCUS25932,rna-TAV2_LOCUS23644 | AT4G27620||AT4G27610 | unknown protein | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1645:rna-TAV2_LOCUS25935,rna-TAV2_LOCUS25166 | AT4G13820 | disease resistance family protein / LRR family protein | GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1646:rna-TAV2_LOCUS25960,rna-TAV2_LOCUS25959 | AT4G19850||AT4G19840 | ATPP2-A2, PP2A2, PP2-A2; ATPP2-A2; carbohydrate binding||ATPP2-A1, ATPP2A-1, PP2-A1; ATPP2-A1; carbohydrate binding | GO:0030246|carbohydrate binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1648:rna-TAV2_LOCUS25993,rna-TAV2_LOCUS25987 | AT5G39720 | AIG2L; AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN) | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1650:rna-TAV2_LOCUS26080,rna-TAV2_LOCUS23799 | AT4G34500||AT4G34440 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0004713|protein tyrosine kinase activity;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1651:rna-TAV2_LOCUS26081,rna-TAV2_LOCUS26084 | AT4G20850 | TPP2; TPP2 (TRIPEPTIDYL PEPTIDASE II); tripeptidyl-peptidase | GO:0005773|vacuole;GO:0016020|membrane;GO:0008240|tripeptidyl-peptidase activity;GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0022626|cytosolic ribosome;GO:0009507|chloroplast;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1653:rna-TAV2_LOCUS4549,rna-TAV2_LOCUS4547 | AT5G04700||AT3G18670 | ankyrin repeat family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04680.1); Has 868 Blast hits to 744 proteins in 75 species: Archae - 0; Bacteria - 22; Metazoa - 164; Fungi - 15; Plants - 471; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). | GO:0005515|protein binding;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1654:rna-TAV2_LOCUS4562,rna-TAV2_LOCUS4559 | AT5G09360 | LAC14; LAC14 (laccase 14); laccase | GO:0055114|oxidation reduction;GO:0048046|apoplast;GO:0012505|endomembrane system;GO:0046274|lignin catabolic process;GO:0008471|laccase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1655:rna-TAV2_LOCUS4594,rna-TAV2_LOCUS4595 | AT1G43650 | integral membrane family protein / nodulin MtN21-related | GO:0012505|endomembrane system;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1657:rna-TAV2_LOCUS4619,rna-TAV2_LOCUS4617 | AT3G06410||AT2G47850 | zinc finger (CCCH-type) family protein||nucleic acid binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1659:rna-TAV2_LOCUS4663,rna-TAV2_LOCUS4662 | AT5G59120||AT5G59190 | ATSBT4.13; ATSBT4.13 (ARABIDOPSIS THALIANA SUBTILASE 4.13); identical protein binding / serine-type endopeptidase||subtilase family protein | GO:0046686|response to cadmium ion;GO:0043086|negative regulation of catalytic activity;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0006508|proteolysis;GO:0042802|identical protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1660:rna-TAV2_LOCUS4664,rna-TAV2_LOCUS4661 | AT3G46850||AT3G46840 | subtilase family protein | GO:0043086|negative regulation of catalytic activity;GO:0004252|serine-type endopeptidase activity;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0042802|identical protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1662:rna-TAV2_LOCUS4766,rna-TAV2_LOCUS4767 | AT2G26500 | cytochrome b6f complex subunit (petM), putative | GO:0009496|plastoquinol-plastocyanin reductase activity;GO:0009535|chloroplast thylakoid membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1663:rna-TAV2_LOCUS4153,rna-TAV2_LOCUS4152 | AT3G58860||AT5G22670 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1665:rna-TAV2_LOCUS4797,rna-TAV2_LOCUS4795 | AT1G11340 | S-locus lectin protein kinase family protein | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1666:rna-TAV2_LOCUS4803,rna-TAV2_LOCUS4799 | AT2G22620 | lyase | GO:0016829|lyase activity;GO:0005975|carbohydrate metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1667:rna-TAV2_LOCUS4821,rna-TAV2_LOCUS4820 | AT5G56530 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1668:rna-TAV2_LOCUS4842,rna-TAV2_LOCUS4843 | AT3G61400||AT5G59530 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0009815|1-aminocyclopropane-1-carboxylate oxidase activity;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1670:rna-TAV2_LOCUS4863,rna-TAV2_LOCUS4869 | AT5G13870||AT4G14130 | XTR7; XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase||EXGT-A4; EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | GO:0006073|cellular glucan metabolic process;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0006499|N-terminal protein myristoylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1673:rna-TAV2_LOCUS4871,rna-TAV2_LOCUS4868 | AT4G25300||AT4G25310 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0005575|cellular_component;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009813|flavonoid biosynthetic process;GO:0016491|oxidoreductase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1674:rna-TAV2_LOCUS4879,rna-TAV2_LOCUS4880 | AT1G61550 | S-locus protein kinase, putative | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0006468|protein amino acid phosphorylation;GO:0048544|recognition of pollen;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1675:rna-TAV2_LOCUS4905,rna-TAV2_LOCUS4908 | AT5G65600||AT5G10530 | lectin protein kinase, putative||legume lectin family protein / protein kinase family protein | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1676:rna-TAV2_LOCUS4925,rna-TAV2_LOCUS4924 | AT4G38660||AT4G38670 | pathogenesis-related thaumatin family protein||thaumatin, putative | GO:0051707|response to other organism;GO:0031225|anchored to membrane;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1677:rna-TAV2_LOCUS8185,rna-TAV2_LOCUS8184 | AT1G70830 | MLP28; MLP28 (MLP-LIKE PROTEIN 28) | GO:0009607|response to biotic stimulus;GO:0006952|defense response;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1678:rna-TAV2_LOCUS8191,rna-TAV2_LOCUS8193 | AT3G28600||AT3G28580 | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0009737|response to abscisic acid stimulus;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0005783|endoplasmic reticulum;GO:0000166|nucleotide binding;GO:0006499|N-terminal protein myristoylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1679:rna-TAV2_LOCUS8192,rna-TAV2_LOCUS8190 | AT5G40010||AT3G28610 | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding||AATP1; AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1680:rna-TAV2_LOCUS8202,rna-TAV2_LOCUS8204 | AT5G24520 | TTG1, TTG, URM23; TTG1 (TRANSPARENT TESTA GLABRA 1); DNA binding / nucleotide binding / protein binding | GO:0009957|epidermal cell fate specification;GO:0032880|regulation of protein localization;GO:0005515|protein binding;GO:0045165|cell fate commitment;GO:0005737|cytoplasm;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0010026|trichome differentiation;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1681:rna-TAV2_LOCUS8215,rna-TAV2_LOCUS8214 | AT5G01750 | unknown protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1682:rna-TAV2_LOCUS8233,rna-TAV2_LOCUS8231 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1684:rna-TAV2_LOCUS8318,rna-TAV2_LOCUS8319 | AT5G35810 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT3G54070.1); Has 446 Blast hits to 440 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 446; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1685:rna-TAV2_LOCUS8322,rna-TAV2_LOCUS8321 | AT2G44480 | BGLU17; BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1686:rna-TAV2_LOCUS8353,rna-TAV2_LOCUS8352 | AT5G40690 | INVOLVED IN: biological_process unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 208 Blast hits to 177 proteins in 46 species: Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 25; Plants - 42; Viruses - 6; Other Eukaryotes - 80 (source: NCBI BLink). | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1687:rna-TAV2_LOCUS8372,rna-TAV2_LOCUS8371 | AT4G30420 | nodulin MtN21 family protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1688:rna-TAV2_LOCUS4203,rna-TAV2_LOCUS4208 | AT1G47890 | AtRLP7; AtRLP7 (Receptor Like Protein 7); kinase/ protein binding | GO:0016301|kinase activity;GO:0005515|protein binding;GO:0007165|signal transduction;GO:0012505|endomembrane system;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1690:rna-TAV2_LOCUS8426,rna-TAV2_LOCUS8425 | AT3G44220||AT3G11660 | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein||NHL1; NHL1 | GO:0051607|defense response to virus;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1691:rna-TAV2_LOCUS8439,rna-TAV2_LOCUS8438 | AT3G45660 | proton-dependent oligopeptide transport (POT) family protein | GO:0006857|oligopeptide transport;GO:0005215|transporter activity;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1692:rna-TAV2_LOCUS8444,rna-TAV2_LOCUS8447 | AT5G06060 | tropinone reductase, putative / tropine dehydrogenase, putative | GO:0008152|metabolic process;GO:0005488|binding;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1694:rna-TAV2_LOCUS8481,rna-TAV2_LOCUS8480 | AT3G45640 | ATMPK3, MPK3; ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3); MAP kinase/ kinase/ protein binding / protein kinase | GO:0004707|MAP kinase activity;GO:0009611|response to wounding;GO:0016301|kinase activity;GO:0005515|protein binding;GO:0009738|abscisic acid mediated signaling pathway;GO:0006970|response to osmotic stress;GO:0010374|stomatal complex development;GO:0007165|signal transduction;GO:0010120|camalexin biosynthetic process;GO:0009409|response to cold;GO:0009617|response to bacterium;GO:0010200|response to chitin;GO:0048481|ovule development;GO:0010375|stomatal complex patterning;GO:0004672|protein kinase activity;GO:0006950|response to stress;GO:0000169|activation of MAPK activity involved in osmosensory signaling pathway;GO:0006979|response to oxidative stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1696:rna-TAV2_LOCUS8509,rna-TAV2_LOCUS8508 | AT3G09270||AT2G29490 | ATGSTU1, GST19; ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1); glutathione transferase||ATGSTU8; ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8); glutathione transferase | GO:0005737|cytoplasm;GO:0004364|glutathione transferase activity;GO:0009407|toxin catabolic process;GO:0046686|response to cadmium ion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1697:rna-TAV2_LOCUS8515,rna-TAV2_LOCUS8518 | AT2G14620 | xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | GO:0006073|cellular glucan metabolic process;GO:0016798|hydrolase activity, acting on glycosyl bonds;GO:0016762|xyloglucan:xyloglucosyl transferase activity;GO:0048046|apoplast;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1698:rna-TAV2_LOCUS8534,rna-TAV2_LOCUS8535 | AT4G08850||AT2G15300 | leucine-rich repeat transmembrane protein kinase, putative||kinase | GO:0016301|kinase activity;GO:0016020|membrane;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1699:rna-TAV2_LOCUS8587,rna-TAV2_LOCUS8588 | AT3G48280||AT3G48310 | CYP71A25; CYP71A25; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP71A22; CYP71A22; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005575|cellular_component;GO:0019825|oxygen binding;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1701:rna-TAV2_LOCUS8613,rna-TAV2_LOCUS8614 | AT2G32030||AT3G22560 | GCN5-related N-acetyltransferase (GNAT) family protein | GO:0005575|cellular_component;GO:0008152|metabolic process;GO:0008080|N-acetyltransferase activity;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1702:rna-TAV2_LOCUS8615,rna-TAV2_LOCUS8616 | AT3G22600 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0031225|anchored to membrane;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1705:rna-TAV2_LOCUS8689,rna-TAV2_LOCUS8691 | AT3G06040 | ribosomal protein L12 family protein | GO:0005840|ribosome;GO:0006412|translation;GO:0015934|large ribosomal subunit;GO:0003735|structural constituent of ribosome;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1706:rna-TAV2_LOCUS8694,rna-TAV2_LOCUS8695 | AT3G63470 | scpl40; scpl40 (serine carboxypeptidase-like 40); serine-type carboxypeptidase | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1707:rna-TAV2_LOCUS8708,rna-TAV2_LOCUS8707 | AT4G32290||AT5G22070 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1709:rna-TAV2_LOCUS11845,rna-TAV2_LOCUS11844 | AT5G47070 | protein kinase, putative | GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1710:rna-TAV2_LOCUS4243,rna-TAV2_LOCUS4244 | AT2G44130 | kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1711:rna-TAV2_LOCUS11876,rna-TAV2_LOCUS11877 | AT5G59320 | LTP3; LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding | GO:0009737|response to abscisic acid stimulus;GO:0008289|lipid binding;GO:0048046|apoplast;GO:0005618|cell wall;GO:0009414|response to water deprivation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1712:rna-TAV2_LOCUS11881,rna-TAV2_LOCUS11880 | AT4G25850 | ORP4B; ORP4B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4B); oxysterol binding | GO:0008142|oxysterol binding;GO:0008202|steroid metabolic process;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1713:rna-TAV2_LOCUS11894,rna-TAV2_LOCUS11893 | AT1G35710 | leucine-rich repeat transmembrane protein kinase, putative | GO:0005515|protein binding;GO:0004674|protein serine/threonine kinase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0007169|transmembrane receptor protein tyrosine kinase signaling pathway;GO:0006468|protein amino acid phosphorylation;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1714:rna-TAV2_LOCUS11899,rna-TAV2_LOCUS11898 | AT1G33720||AT1G33730 | CYP76C5; CYP76C5; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP76C6; CYP76C6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1715:rna-TAV2_LOCUS11921,rna-TAV2_LOCUS11920 | AT5G52400 | CYP715A1; CYP715A1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1716:rna-TAV2_LOCUS11936,rna-TAV2_LOCUS11937 | AT4G05220 | harpin-induced protein-related / HIN1-related / harpin-responsive protein-related | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1717:rna-TAV2_LOCUS11938,rna-TAV2_LOCUS11939 | AT4G21210 | ATRP1; ATRP1 (PPDK REGULATORY PROTEIN); phosphoprotein phosphatase/ protein kinase | GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0004721|phosphoprotein phosphatase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1718:rna-TAV2_LOCUS11983,rna-TAV2_LOCUS11982 | AT5G17820||AT4G26010 | peroxidase 57 (PER57) (P57) (PRXR10)||peroxidase, putative | GO:0016020|membrane;GO:0009505|plant-type cell wall;GO:0005618|cell wall;GO:0009055|electron carrier activity;GO:0004601|peroxidase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0006979|response to oxidative stress | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1721:rna-TAV2_LOCUS4265,rna-TAV2_LOCUS4267 | AT1G69730||AT1G16120 | WAKL1; WAKL1 (wall associated kinase-like 1); kinase||protein kinase family protein | GO:0016301|kinase activity;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1722:rna-TAV2_LOCUS12038,rna-TAV2_LOCUS12037 | AT5G15500 | ankyrin repeat family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1724:rna-TAV2_LOCUS12061,rna-TAV2_LOCUS12063 | AT3G23600 | dienelactone hydrolase family protein | GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1725:rna-TAV2_LOCUS12062,rna-TAV2_LOCUS12064 | AT3G23600 | dienelactone hydrolase family protein | GO:0005737|cytoplasm;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0009651|response to salt stress;GO:0005634|nucleus;GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1728:rna-TAV2_LOCUS12152,rna-TAV2_LOCUS12160 | AT3G25820||AT3G25810 | myrcene/ocimene synthase, putative||ATTPS-CIN; ATTPS-CIN (terpene synthase-like sequence-1,8-cineole); (E)-beta-ocimene synthase/ myrcene synthase | GO:0034002|(R)-limonene synthase activity;GO:0016099|monoterpenoid biosynthetic process;GO:0009536|plastid;GO:0005515|protein binding;GO:0010334|sesquiterpene synthase activity;GO:0050551|myrcene synthase activity;GO:0050552|(4S)-limonene synthase activity;GO:0043693|monoterpene biosynthetic process;GO:0050550|pinene synthase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1729:rna-TAV2_LOCUS12153,rna-TAV2_LOCUS12159 | AT2G32280 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1730:rna-TAV2_LOCUS12172,rna-TAV2_LOCUS12175 | AT4G34131 | UGT73B3; UGT73B3 (UDP-glucosyl transferase 73B3); UDP-glycosyltransferase/ abscisic acid glucosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring hexosyl groups | GO:0035251|UDP-glucosyltransferase activity;GO:0016758|transferase activity, transferring hexosyl groups;GO:0008194|UDP-glycosyltransferase activity;GO:0012505|endomembrane system;GO:0051707|response to other organism | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1732:rna-TAV2_LOCUS4116,rna-TAV2_LOCUS4118 | AT1G15950||AT1G80820 | CCR2, ATCCR2; CCR2 (CINNAMOYL COA REDUCTASE); cinnamoyl-CoA reductase||CCR1, IRX4, ATCCR1; CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | GO:0016621|cinnamoyl-CoA reductase activity;GO:0009409|response to cold;GO:0005575|cellular_component;GO:0009809|lignin biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1733:rna-TAV2_LOCUS12194,rna-TAV2_LOCUS12192 | AT4G16330 | oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | GO:0009813|flavonoid biosynthetic process;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0016491|oxidoreductase activity;GO:0005777|peroxisome | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1734:rna-TAV2_LOCUS12228,rna-TAV2_LOCUS12229 | AT4G14480 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1735:rna-TAV2_LOCUS12231,rna-TAV2_LOCUS12230 | AT1G06620 | 2-oxoglutarate-dependent dioxygenase, putative | GO:0010302|2-oxoglutarate-dependent dioxygenase activity;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1736:rna-TAV2_LOCUS4320,rna-TAV2_LOCUS4321 | AT3G47800 | aldose 1-epimerase family protein | GO:0019318|hexose metabolic process;GO:0004034|aldose 1-epimerase activity;GO:0012505|endomembrane system;GO:0006012|galactose metabolic process;GO:0005975|carbohydrate metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1738:rna-TAV2_LOCUS15089,rna-TAV2_LOCUS15095 | AT3G15510||AT1G69490 | NAP, ANAC029, ATNAP; NAP (NAC-like, activated by AP3/PI); transcription factor||ATNAC2, ANAC056, NARS1; ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | GO:0009825|multidimensional cell growth;GO:0009908|flower development;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0007275|multicellular organismal development;GO:0005575|cellular_component;GO:0005634|nucleus;GO:0010150|leaf senescence | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1740:rna-TAV2_LOCUS15126,rna-TAV2_LOCUS15127 | AT5G33340 | CDR1; CDR1 (CONSTITUTIVE DISEASE RESISTANCE 1); aspartic-type endopeptidase | GO:0010337|regulation of salicylic acid metabolic process;GO:0042742|defense response to bacterium;GO:0010310|regulation of hydrogen peroxide metabolic process;GO:0048046|apoplast;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1741:rna-TAV2_LOCUS18406,rna-TAV2_LOCUS18404 | AT5G53190 | nodulin MtN3 family protein | GO:0016021|integral to membrane;GO:0008150|biological_process;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1742:rna-TAV2_LOCUS22381,rna-TAV2_LOCUS22383 | AT5G64560 | magnesium transporter CorA-like family protein (MRS2-2) | GO:0046873|metal ion transmembrane transporter activity;GO:0030001|metal ion transport;GO:0015095|magnesium ion transmembrane transporter activity;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1747:rna-TAV2_LOCUS26157,rna-TAV2_LOCUS26156 | AT1G22370 | AtUGT85A5; AtUGT85A5 (UDP-glucosyl transferase 85A5); glucuronosyltransferase/ transferase, transferring glycosyl groups | GO:0015020|glucuronosyltransferase activity;GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1749:rna-TAV2_LOCUS26217,rna-TAV2_LOCUS26220 | AT3G59070||AT4G17280 | INVOLVED IN: multicellular organismal development; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: auxin-responsive protein, putative (TAIR:AT5G47530.1); Has 203 Blast hits to 203 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||auxin-responsive protein, putative | GO:0007275|multicellular organismal development;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1751:rna-TAV2_LOCUS26255,rna-TAV2_LOCUS26254 | AT4G39230 | isoflavone reductase, putative | GO:0032442|phenylcoumaran benzylic ether reductase activity;GO:0005575|cellular_component;GO:0046686|response to cadmium ion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1752:rna-TAV2_LOCUS26258,rna-TAV2_LOCUS26256 | AT4G39230 | isoflavone reductase, putative | GO:0032442|phenylcoumaran benzylic ether reductase activity;GO:0005575|cellular_component;GO:0046686|response to cadmium ion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1753:rna-TAV2_LOCUS26263,rna-TAV2_LOCUS26261 | AT3G60130 | BGLU16; BGLU16 (BETA GLUCOSIDASE 16); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1754:rna-TAV2_LOCUS26264,rna-TAV2_LOCUS26262 | AT2G44480||AT3G60130 | BGLU17; BGLU17 (BETA GLUCOSIDASE 17); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds||BGLU16; BGLU16 (BETA GLUCOSIDASE 16); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0043169|cation binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1756:rna-TAV2_LOCUS26315,rna-TAV2_LOCUS26316 | AT1G52340||AT3G51680 | ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1; ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase||short-chain dehydrogenase/reductase (SDR) family protein | GO:0005488|binding;GO:0010182|sugar mediated signaling pathway;GO:0016491|oxidoreductase activity;GO:0005829|cytosol;GO:0003824|catalytic activity;GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0010301|xanthoxin dehydrogenase activity;GO:0006561|proline biosynthetic process;GO:0008152|metabolic process;GO:0009408|response to heat;GO:0009414|response to water deprivation;GO:0005575|cellular_component;GO:0010115|regulation of abscisic acid biosynthetic process;GO:0009688|abscisic acid biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1757:rna-TAV2_LOCUS26379,rna-TAV2_LOCUS26382 | AT4G36220 | FAH1, CYP84A1; FAH1 (FERULIC ACID 5-HYDROXYLASE 1); ferulate 5-hydroxylase/ monooxygenase | GO:0010224|response to UV-B;GO:0009699|phenylpropanoid biosynthetic process;GO:0046424|ferulate 5-hydroxylase activity;GO:0009809|lignin biosynthetic process;GO:0004497|monooxygenase activity;GO:0005783|endoplasmic reticulum | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1758:rna-TAV2_LOCUS26391,rna-TAV2_LOCUS26390 | AT2G18670||AT3G61460 | zinc finger (C3HC4-type RING finger) family protein||BRH1; BRH1 (BRASSINOSTEROID-RESPONSIVE RING-H2); protein binding / zinc ion binding | GO:0009741|response to brassinosteroid stimulus;GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0012505|endomembrane system;GO:0010200|response to chitin | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1759:rna-TAV2_LOCUS4124,rna-TAV2_LOCUS4127 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1762:rna-TAV2_LOCUS4439,rna-TAV2_LOCUS4438 | AT5G45890||AT2G34080 | SAG12; SAG12 (SENESCENCE-ASSOCIATED GENE 12); cysteine-type peptidase||cysteine proteinase, putative | GO:0009723|response to ethylene stimulus;GO:0007568|aging;GO:0010282|senescence associated vacuole;GO:0009817|defense response to fungus, incompatible interaction;GO:0012505|endomembrane system;GO:0006508|proteolysis;GO:0010150|leaf senescence | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1763:rna-TAV2_LOCUS4128,rna-TAV2_LOCUS4131 | AT5G40010 | AATP1; AATP1 (AAA-ATPase 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0005524|ATP binding;GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1764:rna-TAV2_LOCUS4462,rna-TAV2_LOCUS4465 | AT5G15500 | ankyrin repeat family protein | GO:0012505|endomembrane system;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA1765:rna-TAV2_LOCUS4463,rna-TAV2_LOCUS4464 | AT4G17030 | ATEXLB1, EXPR, AT-EXPR, ATEXPR1, ATHEXP BETA 3.1; ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) | GO:0005576|extracellular region;GO:0009826|unidimensional cell growth;GO:0009828|plant-type cell wall loosening;GO:0019953|sexual reproduction;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA615:rna-TAV2_LOCUS1052,rna-TAV2_LOCUS2550 | AT1G28220||AT1G28230 | PUP1, ATPUP1; PUP1 (PURINE PERMEASE 1); purine nucleoside transmembrane transporter/ purine transmembrane transporter||ATPUP3; ATPUP3; purine transmembrane transporter | GO:0005345|purine transmembrane transporter activity;GO:0005887|integral to plasma membrane;GO:0016020|membrane;GO:0010184|cytokinin transport;GO:0015211|purine nucleoside transmembrane transporter activity;GO:0006863|purine transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA616:rna-TAV2_LOCUS1064,rna-TAV2_LOCUS2716 | AT5G38020 | S-adenosyl-L-methionine:carboxyl methyltransferase family protein | GO:0006633|fatty acid biosynthetic process;GO:0008757|S-adenosylmethionine-dependent methyltransferase activity;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA618:rna-TAV2_LOCUS1107,rna-TAV2_LOCUS1105 | AT1G51120||AT1G50680 | AP2 domain-containing transcription factor, putative | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus;GO:0003700|transcription factor activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA619:rna-TAV2_LOCUS112,rna-TAV2_LOCUS2667 | AT5G05430 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, leaf; EXPRESSED DURING: LP.04 four leaves visible; BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT3G09160.1); Has 23 Blast hits to 21 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA621:rna-TAV2_LOCUS115,rna-TAV2_LOCUS116 | AT1G26610||AT1G26590 | zinc finger (C2H2 type) family protein | GO:0003676|nucleic acid binding;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0008270|zinc ion binding;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA623:rna-TAV2_LOCUS1269,rna-TAV2_LOCUS1268 | AT1G20700 | WOX14, ATWOX14; WOX14 (WUSCHEL RELATED HOMEOBOX 14); DNA binding / transcription factor | GO:0010072|primary shoot apical meristem specification;GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA625:rna-TAV2_LOCUS1316,rna-TAV2_LOCUS1315 | AT1G03445 | BSU1; BSU1 (BRI1 SUPPRESSOR 1); protein serine/threonine phosphatase | GO:0032880|regulation of protein localization;GO:0005515|protein binding;GO:0004722|protein serine/threonine phosphatase activity;GO:0009742|brassinosteroid mediated signaling pathway;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA626:rna-TAV2_LOCUS1324,rna-TAV2_LOCUS2902 | AT1G15890 | disease resistance protein (CC-NBS-LRR class), putative | GO:0005515|protein binding;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006915|apoptosis;GO:0006499|N-terminal protein myristoylation;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA627:rna-TAV2_LOCUS1347,rna-TAV2_LOCUS1352 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA632:rna-TAV2_LOCUS1495,rna-TAV2_LOCUS3630 | AT1G53420||AT1G53430 | leucine-rich repeat family protein / protein kinase family protein||serine/threonine protein kinase-related | GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA634:rna-TAV2_LOCUS1519,rna-TAV2_LOCUS3055 | AT1G12100||AT1G12090 | ELP; ELP (EXTENSIN-LIKE PROTEIN); lipid binding||lipid binding | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA635:rna-TAV2_LOCUS1522,rna-TAV2_LOCUS1520 | AT1G12200||AT1G12140 | flavin-containing monooxygenase family protein / FMO family protein||FMO GS-OX5; FMO GS-OX5 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 5); 8-methylthiopropyl glucosinolate S-oxygenase/ flavin-containing monooxygenase/ monooxygenase | GO:0004499|flavin-containing monooxygenase activity;GO:0004497|monooxygenase activity;GO:0050660|FAD binding;GO:0019761|glucosinolate biosynthetic process;GO:0050661|NADP or NADPH binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA636:rna-TAV2_LOCUS1616,rna-TAV2_LOCUS1617 | AT1G12550 | oxidoreductase family protein | GO:0005488|binding;GO:0051287|NAD or NADH binding;GO:0003824|catalytic activity;GO:0048037|cofactor binding;GO:0008152|metabolic process;GO:0016616|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA637:rna-TAV2_LOCUS1639,rna-TAV2_LOCUS1641 | AT1G02475||AT1G02470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02475.1); Has 276 Blast hits to 276 proteins in 86 species: Archae - 0; Bacteria - 162; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01883.1); Has 350 Blast hits to 350 proteins in 105 species: Archae - 0; Bacteria - 211; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink). | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA638:rna-TAV2_LOCUS1671,rna-TAV2_LOCUS1667 | AT1G32660||AT1G30790 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA639:rna-TAV2_LOCUS1672,rna-TAV2_LOCUS1668 | AT1G32660 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA642:rna-TAV2_LOCUS1732,rna-TAV2_LOCUS1726 | AT1G55790 | ATP binding / nucleotide binding / phenylalanine-tRNA ligase | GO:0006412|translation;GO:0005737|cytoplasm;GO:0005524|ATP binding;GO:0006432|phenylalanyl-tRNA aminoacylation;GO:0000166|nucleotide binding;GO:0004826|phenylalanine-tRNA ligase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA643:rna-TAV2_LOCUS1756,rna-TAV2_LOCUS261 | AT1G11220||AT1G11210 | unknown protein | GO:0012505|endomembrane system;GO:0006979|response to oxidative stress;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA645:rna-TAV2_LOCUS1836,rna-TAV2_LOCUS1837 | AT1G43910 | AAA-type ATPase family protein | GO:0017111|nucleoside-triphosphatase activity;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0012505|endomembrane system;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA647:rna-TAV2_LOCUS1874,rna-TAV2_LOCUS1873 | AT1G10070||AT1G10060 | ATBCAT-1; branched-chain amino acid aminotransferase 1 / branched-chain amino acid transaminase 1 (BCAT1)||ATBCAT-2; ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic | GO:0003824|catalytic activity;GO:0005515|protein binding;GO:0008152|metabolic process;GO:0009081|branched chain family amino acid metabolic process;GO:0004084|branched-chain-amino-acid transaminase activity;GO:0009507|chloroplast;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA649:rna-TAV2_LOCUS1905,rna-TAV2_LOCUS1900 | AT1G10586 | transcription regulator | GO:0005634|nucleus;GO:0030528|transcription regulator activity;GO:0045449|regulation of transcription | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA651:rna-TAV2_LOCUS1949,rna-TAV2_LOCUS3530 | AT1G27150||AT1G27110 | binding | GO:0005488|binding;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA652:rna-TAV2_LOCUS194,rna-TAV2_LOCUS196 | AT1G30550||AT1G30545 | ||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: WW domain-containing protein (TAIR:AT1G45231.2); Has 891 Blast hits to 591 proteins in 275 species: Archae - 68; Bacteria - 248; Metazoa - 211; Fungi - 176; Plants - 45; Viruses - 3; Other Eukaryotes - 140 (source: NCBI BLink). | ;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA653:rna-TAV2_LOCUS1966,rna-TAV2_LOCUS1967 | AT1G14250||AT1G14230 | nucleoside phosphatase family protein / GDA1/CD39 family protein | GO:0005773|vacuole;GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA654:rna-TAV2_LOCUS1986,rna-TAV2_LOCUS1989 | AT1G21670||AT1G21680 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21670.1); Has 6869 Blast hits to 3873 proteins in 790 species: Archae - 41; Bacteria - 3697; Metazoa - 41; Fungi - 39; Plants - 64; Viruses - 0; Other Eukaryotes - 2987 (source: NCBI BLink).||INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40-like Beta Propeller (InterPro:IPR011659), Peptidase S9B, dipeptidylpeptidase IV N-terminal (InterPro:IPR002469), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21680.1); Has 6126 Blast hits to 3685 proteins in 788 species: Archae - 47; Bacteria - 3362; Metazoa - 27; Fungi - 47; Plants - 58; Viruses - 0; Other Eukaryotes - 2585 (source: NCBI BLink). | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0005618|cell wall;GO:0008150|biological_process;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA656:rna-TAV2_LOCUS2036,rna-TAV2_LOCUS457 | AT1G08080||AT1G08065 | ATACA7, ACA7; ACA7 (ALPHA CARBONIC ANHYDRASE 7); carbonate dehydratase/ zinc ion binding||ATACA5, ACA5; ACA5 (ALPHA CARBONIC ANHYDRASE 5); carbonate dehydratase/ zinc ion binding | GO:0012505|endomembrane system;GO:0004089|carbonate dehydratase activity;GO:0006730|one-carbon metabolic process;GO:0008270|zinc ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA657:rna-TAV2_LOCUS2091,rna-TAV2_LOCUS3695 | AT5G48510 | speckle-type POZ protein-related | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA658:rna-TAV2_LOCUS2143,rna-TAV2_LOCUS2145 | AT1G13195 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA661:rna-TAV2_LOCUS2200,rna-TAV2_LOCUS2206 | AT1G22090 | emb2204; emb2204 (embryo defective 2204) | GO:0009793|embryonic development ending in seed dormancy;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA662:rna-TAV2_LOCUS2217,rna-TAV2_LOCUS2216 | AT2G43670 | glycosyl hydrolase family protein 17 | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA663:rna-TAV2_LOCUS2219,rna-TAV2_LOCUS2218 | AT1G28360||AT1G28370 | ERF12, ATERF12; ERF12 (ERF DOMAIN PROTEIN 12); DNA binding / transcription factor/ transcription repressor||ERF11, ATERF11; ERF11 (ERF DOMAIN PROTEIN 11); DNA binding / transcription factor/ transcription repressor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0016564|transcription repressor activity;GO:0009873|ethylene mediated signaling pathway;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA666:rna-TAV2_LOCUS2352,rna-TAV2_LOCUS2345 | AT1G33600||AT2G26380 | leucine-rich repeat family protein||disease resistance protein-related / LRR protein-related | GO:0005515|protein binding;GO:0016020|membrane;GO:0009505|plant-type cell wall;GO:0007165|signal transduction;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA669:rna-TAV2_LOCUS2379,rna-TAV2_LOCUS2374 | AT1G05950 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA671:rna-TAV2_LOCUS2404,rna-TAV2_LOCUS2520 | AT2G27010 | CYP705A9; CYP705A9; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0020037|heme binding;GO:0019825|oxygen binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA673:rna-TAV2_LOCUS2429,rna-TAV2_LOCUS2430 | AT5G38180||AT3G57310 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system;GO:0006869|lipid transport;GO:0008289|lipid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA674:rna-TAV2_LOCUS242,rna-TAV2_LOCUS248 | AT1G55850 | ATCSLE1, CSLE1; ATCSLE1; cellulose synthase/ transferase, transferring glycosyl groups | GO:0030244|cellulose biosynthetic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0009832|plant-type cell wall biogenesis;GO:0000271|polysaccharide biosynthetic process;GO:0005886|plasma membrane;GO:0016759|cellulose synthase activity;GO:0005783|endoplasmic reticulum | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA675:rna-TAV2_LOCUS2460,rna-TAV2_LOCUS3642 | AT1G09500||AT1G09490 | cinnamyl-alcohol dehydrogenase family / CAD family | GO:0004022|alcohol dehydrogenase (NAD) activity;GO:0009809|lignin biosynthetic process;GO:0008152|metabolic process;GO:0012505|endomembrane system;GO:0045551|cinnamyl-alcohol dehydrogenase activity;GO:0044237|cellular metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA677:rna-TAV2_LOCUS2469,rna-TAV2_LOCUS2476 | AT1G29770||AT1G29780 | NLI interacting factor (NIF) family protein | GO:0016791|phosphatase activity;GO:0005739|mitochondrion;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA679:rna-TAV2_LOCUS2508,rna-TAV2_LOCUS2813 | AT2G02220||AT1G14688 | ATPSKR1, PSKR1; PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase||unknown protein | GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA680:rna-TAV2_LOCUS2518,rna-TAV2_LOCUS2410 | AT1G52880||AT1G52890 | NAM, ANAC018, ATNAM, NARS2; NAM (NO APICAL MERISTEM); transcription factor||ANAC019; ANAC019 (Arabidopsis NAC domain containing protein 19); transcription factor | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0007275|multicellular organismal development;GO:0009414|response to water deprivation;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA681:rna-TAV2_LOCUS2571,rna-TAV2_LOCUS2570 | AT1G17150 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0012505|endomembrane system;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA684:rna-TAV2_LOCUS2685,rna-TAV2_LOCUS2686 | AT1G21280 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA685:rna-TAV2_LOCUS2707,rna-TAV2_LOCUS2706 | AT1G02250 | anac005; anac005 (Arabidopsis NAC domain containing protein 5); transcription factor | GO:0045449|regulation of transcription | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA686:rna-TAV2_LOCUS2720,rna-TAV2_LOCUS2719 | AT1G52030||AT2G39310 | MBP2, MBP1.2, F-ATMBP; MBP2 (MYROSINASE-BINDING PROTEIN 2); sugar binding / thioglucosidase binding||JAL22; JAL22 (JACALIN-RELATED LECTIN 22) | GO:0005529|sugar binding;GO:0003674|molecular_function;GO:0009908|flower development;GO:0007155|cell adhesion;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0010180|thioglucosidase binding;GO:0010169|thioglucosidase complex;GO:0006952|defense response;GO:0009611|response to wounding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA687:rna-TAV2_LOCUS2821,rna-TAV2_LOCUS2822 | AT1G14480 | protein binding | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA688:rna-TAV2_LOCUS2886,rna-TAV2_LOCUS2887 | AT1G55240 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA690:rna-TAV2_LOCUS2937,rna-TAV2_LOCUS2939 | AT5G54067 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA691:rna-TAV2_LOCUS2964,rna-TAV2_LOCUS2965 | AT1G07530||AT1G07520 | scarecrow transcription factor family protein||SCL14, ATGRAS2, GRAS2; SCL14 (SCARECROW-LIKE 14); transcription factor | GO:0005829|cytosol;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0043193|positive regulation of gene-specific transcription;GO:0010200|response to chitin;GO:0009410|response to xenobiotic stimulus;GO:0005575|cellular_component;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA692:rna-TAV2_LOCUS2972,rna-TAV2_LOCUS2973 | AT1G07470 | transcription factor IIA large subunit, putative / TFIIA large subunit, putative | GO:0005672|transcription factor TFIIA complex;GO:0003700|transcription factor activity;GO:0003702|RNA polymerase II transcription factor activity;GO:0006367|transcription initiation from RNA polymerase II promoter;GO:0006350|transcription | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA693:rna-TAV2_LOCUS2990,rna-TAV2_LOCUS1467 | AT5G49690 | UDP-glucoronosyl/UDP-glucosyl transferase family protein | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA697:rna-TAV2_LOCUS308,rna-TAV2_LOCUS307 | AT2G22440 | BEST Arabidopsis thaliana protein match is: reverse transcriptase, putative / RNA-dependent DNA polymerase, putative (TAIR:AT4G29090.1); Has 149 Blast hits to 133 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA699:rna-TAV2_LOCUS3163,rna-TAV2_LOCUS3162 | AT1G53070||AT1G53080 | legume lectin family protein | GO:0005529|sugar binding;GO:0009505|plant-type cell wall;GO:0030246|carbohydrate binding;GO:0005618|cell wall;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA700:rna-TAV2_LOCUS3185,rna-TAV2_LOCUS3183 | AT2G04420 | nucleic acid binding | GO:0005739|mitochondrion;GO:0008150|biological_process;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA701:rna-TAV2_LOCUS3189,rna-TAV2_LOCUS3190 | AT1G30170||AT1G30160 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA702:rna-TAV2_LOCUS3194,rna-TAV2_LOCUS3191 | AT1G30700||AT1G30710 | FAD-binding domain-containing protein | GO:0016491|oxidoreductase activity;GO:0003824|catalytic activity;GO:0012505|endomembrane system;GO:0050660|FAD binding;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA704:rna-TAV2_LOCUS3227,rna-TAV2_LOCUS3226 | AT1G09650 | F-box family protein | GO:0010200|response to chitin;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA705:rna-TAV2_LOCUS3280,rna-TAV2_LOCUS3281 | AT1G40087 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30200.1); Has 103 Blast hits to 103 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA706:rna-TAV2_LOCUS3314,rna-TAV2_LOCUS3310 | AT1G27330 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27350.1); Has 267 Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | GO:0006979|response to oxidative stress;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA707:rna-TAV2_LOCUS3317,rna-TAV2_LOCUS3316 | AT1G24267 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA708:rna-TAV2_LOCUS3340,rna-TAV2_LOCUS1608 | AT3G16175 | thioesterase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0005575|cellular_component;GO:0016291|acyl-CoA thioesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA710:rna-TAV2_LOCUS3399,rna-TAV2_LOCUS3400 | AT1G48130 | ATPER1; ATPER1; antioxidant/ thioredoxin peroxidase | GO:0010231|maintenance of seed dormancy;GO:0009269|response to desiccation;GO:0005575|cellular_component;GO:0008379|thioredoxin peroxidase activity;GO:0016209|antioxidant activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA711:rna-TAV2_LOCUS341,rna-TAV2_LOCUS340 | AT1G54180 | ATBRXL3, BRX-LIKE3; BRX-LIKE3 (BREVIS RADIX-LIKE 3) | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA714:rna-TAV2_LOCUS3442,rna-TAV2_LOCUS3445 | AT1G01550 | BPS1; BPS1 (BYPASS 1) | GO:0005886|plasma membrane;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA715:rna-TAV2_LOCUS3443,rna-TAV2_LOCUS3444 | AT2G42465 | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA716:rna-TAV2_LOCUS3559,rna-TAV2_LOCUS3557 | AT1G49650 | cell death associated protein-related | GO:0008152|metabolic process;GO:0016787|hydrolase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA717:rna-TAV2_LOCUS3581,rna-TAV2_LOCUS3582 | AT1G09650 | F-box family protein | GO:0010200|response to chitin;GO:0005575|cellular_component;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA718:rna-TAV2_LOCUS35,rna-TAV2_LOCUS37 | AT1G53600 | pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA719:rna-TAV2_LOCUS3608,rna-TAV2_LOCUS3613 | AT1G12980||AT1G12890 | ESR1, DRN; ESR1 (ENHANCER OF SHOOT REGENERATION 1); DNA binding / protein binding / transcription factor||AP2 domain-containing transcription factor, putative | GO:0009887|organ morphogenesis;GO:0005829|cytosol;GO:0005515|protein binding;GO:0009735|response to cytokinin stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0009880|embryonic pattern specification;GO:0010084|specification of organ axis polarity;GO:0003700|transcription factor activity;GO:0048825|cotyledon development;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA720:rna-TAV2_LOCUS3620,rna-TAV2_LOCUS2033 | AT1G08150||AT1G08140 | ATCHX5, CHX5; ATCHX5; monovalent cation:proton antiporter/ sodium:hydrogen antiporter||ATCHX6A, CHX6A; ATCHX6A (CATION/H+ EXCHANGER 6A); monovalent cation:proton antiporter/ sodium:hydrogen antiporter | GO:0016021|integral to membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA721:rna-TAV2_LOCUS3624,rna-TAV2_LOCUS3627 | AT3G59200 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA722:rna-TAV2_LOCUS3640,rna-TAV2_LOCUS3641 | AT5G60380 | unknown protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA724:rna-TAV2_LOCUS3714,rna-TAV2_LOCUS3716 | AT1G44920 | unknown protein | GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA725:rna-TAV2_LOCUS3715,rna-TAV2_LOCUS3717 | AT5G27510||AT2G42550 | protein kinase family protein | GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA727:rna-TAV2_LOCUS3755,rna-TAV2_LOCUS2149 | AT1G49010 | myb family transcription factor | GO:0009751|response to salicylic acid stimulus;GO:0009739|response to gibberellin stimulus;GO:0046686|response to cadmium ion;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0009753|response to jasmonic acid stimulus;GO:0009651|response to salt stress;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA728:rna-TAV2_LOCUS3846,rna-TAV2_LOCUS3848 | AT1G48320 | thioesterase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0008150|biological_process;GO:0016291|acyl-CoA thioesterase activity;GO:0005777|peroxisome | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA730:rna-TAV2_LOCUS3879,rna-TAV2_LOCUS2301 | AT1G10370||AT1G10360 | ATGSTU18, GST29; ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18); glutathione transferase||GST30, ATGSTU17, GST30B, ERD9; ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase | GO:0005737|cytoplasm;GO:0009507|chloroplast;GO:0004364|glutathione transferase activity;GO:0009407|toxin catabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA731:rna-TAV2_LOCUS3886,rna-TAV2_LOCUS1942 | AT1G52080 | AR791; AR791; actin binding | GO:0012505|endomembrane system;GO:0003779|actin binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA732:rna-TAV2_LOCUS3995,rna-TAV2_LOCUS3998 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA733:rna-TAV2_LOCUS4010,rna-TAV2_LOCUS3546 | AT1G07260||AT1G07240 | UGT71C3; UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups||UGT71C5; UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5); UDP-glycosyltransferase/ quercetin 3-O-glucosyltransferase/ transferase, transferring glycosyl groups | GO:0008152|metabolic process;GO:0016757|transferase activity, transferring glycosyl groups;GO:0005575|cellular_component;GO:0008194|UDP-glycosyltransferase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA735:rna-TAV2_LOCUS4084,rna-TAV2_LOCUS682 | AT1G24300 | LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: GYF domain-containing protein (TAIR:AT1G27430.1); Has 21766 Blast hits to 10819 proteins in 514 species: Archae - 0; Bacteria - 738; Metazoa - 8216; Fungi - 1952; Plants - 1070; Viruses - 89; Other Eukaryotes - 9701 (source: NCBI BLink). | GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA736:rna-TAV2_LOCUS425,rna-TAV2_LOCUS422 | AT1G01660||AT1G01680 | U-box domain-containing protein | GO:0000151|ubiquitin ligase complex;GO:0016567|protein ubiquitination;GO:0004842|ubiquitin-protein ligase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA737:rna-TAV2_LOCUS438,rna-TAV2_LOCUS437 | AT1G25270||AT1G68170 | LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 family protein (TAIR:AT1G68170.1); Has 1288 Blast hits to 1274 proteins in 251 species: Archae - 4; Bacteria - 491; Metazoa - 4; Fungi - 8; Plants - 639; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).||nodulin MtN21 family protein | GO:0012505|endomembrane system;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA738:rna-TAV2_LOCUS454,rna-TAV2_LOCUS456 | AT1G07560||AT2G14440 | leucine-rich repeat protein kinase, putative | GO:0012505|endomembrane system;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA740:rna-TAV2_LOCUS504,rna-TAV2_LOCUS505 | AT2G30310||AT1G06990 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA741:rna-TAV2_LOCUS529,rna-TAV2_LOCUS527 | AT1G14870 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: EGF-type aspartate/asparagine hydroxylation conserved site (InterPro:IPR000152), Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35525.1); Has 492 Blast hits to 491 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 76; Plants - 297; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0006979|response to oxidative stress;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA742:rna-TAV2_LOCUS608,rna-TAV2_LOCUS70 | AT1G56270 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA744:rna-TAV2_LOCUS686,rna-TAV2_LOCUS687 | AT1G27360||AT1G27370 | squamosa promoter-binding protein-like 11 (SPL11)||squamosa promoter-binding protein-like 10 (SPL10) | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0010358|leaf shaping;GO:0048510|regulation of timing of transition from vegetative to reproductive phase;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA745:rna-TAV2_LOCUS68,rna-TAV2_LOCUS65 | AT1G28000||AT1G28020 | pentatricopeptide (PPR) repeat-containing protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G28020.1); Has 219 Blast hits to 213 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA746:rna-TAV2_LOCUS716,rna-TAV2_LOCUS714 | AT3G62200 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537 (InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: EDA32 (embryo sac development arrest 32) (TAIR:AT3G62210.1); Has 3380 Blast hits to 2820 proteins in 272 species: Archae - 0; Bacteria - 93; Metazoa - 1555; Fungi - 720; Plants - 473; Viruses - 42; Other Eukaryotes - 497 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA748:rna-TAV2_LOCUS758,rna-TAV2_LOCUS759 | AT1G20693 | HMGB2, HMG BETA 1, NFD2, NFD02; HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | GO:0003682|chromatin binding;GO:0003700|transcription factor activity;GO:0000785|chromatin;GO:0006333|chromatin assembly or disassembly;GO:0030527|structural constituent of chromatin;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA749:rna-TAV2_LOCUS826,rna-TAV2_LOCUS820 | AT2G03931 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA753:rna-TAV2_LOCUS965,rna-TAV2_LOCUS3605 | AT1G19500 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA754:rna-TAV2_LOCUS4978,rna-TAV2_LOCUS4977 | AT4G32105||AT4G32110 | transferase, transferring glycosyl groups||galactosyltransferase | GO:0016757|transferase activity, transferring glycosyl groups;GO:0016020|membrane;GO:0008378|galactosyltransferase activity;GO:0012505|endomembrane system;GO:0006486|protein amino acid glycosylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA756:rna-TAV2_LOCUS4990,rna-TAV2_LOCUS4989 | AT2G01690 | binding | GO:0005886|plasma membrane;GO:0005488|binding;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA757:rna-TAV2_LOCUS5003,rna-TAV2_LOCUS4999 | AT1G62670 | pentatricopeptide (PPR) repeat-containing protein | GO:0005739|mitochondrion;GO:0003723|RNA binding;GO:0000966|RNA 5'-end processing | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA760:rna-TAV2_LOCUS5095,rna-TAV2_LOCUS5102 | AT1G62670||AT5G16640 | pentatricopeptide (PPR) repeat-containing protein | GO:0005739|mitochondrion;GO:0003723|RNA binding;GO:0000966|RNA 5'-end processing;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA761:rna-TAV2_LOCUS5132,rna-TAV2_LOCUS5130 | AT2G44880 | pentatricopeptide (PPR) repeat-containing protein | GO:0012505|endomembrane system;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA764:rna-TAV2_LOCUS5175,rna-TAV2_LOCUS5176 | AT1G73510 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA765:rna-TAV2_LOCUS5180,rna-TAV2_LOCUS6372 | AT2G26030 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA766:rna-TAV2_LOCUS5288,rna-TAV2_LOCUS6153 | AT5G65980 | auxin efflux carrier family protein | GO:0012505|endomembrane system;GO:0016021|integral to membrane;GO:0009926|auxin polar transport;GO:0009672|auxin:hydrogen symporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA767:rna-TAV2_LOCUS5289,rna-TAV2_LOCUS8157 | AT5G65960 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA769:rna-TAV2_LOCUS5294,rna-TAV2_LOCUS6466 | AT5G26280 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA771:rna-TAV2_LOCUS5319,rna-TAV2_LOCUS5320 | AT1G06580 | pentatricopeptide (PPR) repeat-containing protein | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA772:rna-TAV2_LOCUS5324,rna-TAV2_LOCUS7281 | AT5G46050 | ATPTR3, PTR3; PTR3 (PEPTIDE TRANSPORTER 3); dipeptide transporter/ transporter/ tripeptide transporter | GO:0009737|response to abscisic acid stimulus;GO:0009751|response to salicylic acid stimulus;GO:0042742|defense response to bacterium;GO:0042538|hyperosmotic salinity response;GO:0016020|membrane;GO:0042937|tripeptide transporter activity;GO:0042936|dipeptide transporter activity;GO:0006857|oligopeptide transport;GO:0005215|transporter activity;GO:0043201|response to leucine;GO:0009753|response to jasmonic acid stimulus;GO:0042939|tripeptide transport;GO:0009611|response to wounding;GO:0042938|dipeptide transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA773:rna-TAV2_LOCUS5328,rna-TAV2_LOCUS5665 | AT5G45960||AT5G45950 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0016298|lipase activity;GO:0006629|lipid metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA775:rna-TAV2_LOCUS5414,rna-TAV2_LOCUS5409 | AT2G02610 | DC1 domain-containing protein | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA776:rna-TAV2_LOCUS5457,rna-TAV2_LOCUS5456 | AT5G12420 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA777:rna-TAV2_LOCUS5492,rna-TAV2_LOCUS5495 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA780:rna-TAV2_LOCUS5619,rna-TAV2_LOCUS5620 | AT5G64290||AT5G64280 | DiT2.2; DiT2.2 (dicarboxylate transporter 2.2); oxoglutarate:malate antiporter||DCT, DIT2.1; DIT2.1 (DICARBOXYLATE TRANSPORT 2.1); oxoglutarate:malate antiporter | GO:0006814|sodium ion transport;GO:0015367|oxoglutarate:malate antiporter activity;GO:0016020|membrane;GO:0009941|chloroplast envelope;GO:0015743|malate transport;GO:0009624|response to nematode;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA781:rna-TAV2_LOCUS5629,rna-TAV2_LOCUS5631 | AT5G46990||AT1G54620 | invertase/pectin methylesterase inhibitor family protein | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA782:rna-TAV2_LOCUS5632,rna-TAV2_LOCUS5941 | AT5G46940||AT5G46950 | invertase/pectin methylesterase inhibitor family protein | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA784:rna-TAV2_LOCUS5687,rna-TAV2_LOCUS5689 | AT1G61566 | RALFL9; RALFL9 (ralf-like 9); signal transducer | GO:0004871|signal transducer activity;GO:0007267|cell-cell signaling;GO:0048046|apoplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA786:rna-TAV2_LOCUS5754,rna-TAV2_LOCUS6936 | AT3G01920 | yrdC family protein | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA788:rna-TAV2_LOCUS5779,rna-TAV2_LOCUS5610 | AT5G48960||AT5G48945 | 5' nucleotidase family protein||LCR46; LCR46 (Low-molecular-weight cysteine-rich 46) | GO:0008253|5'-nucleotidase activity;GO:0012505|endomembrane system;GO:0009570|chloroplast stroma;GO:0008150|biological_process;GO:0009507|chloroplast;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA791:rna-TAV2_LOCUS5819,rna-TAV2_LOCUS5818 | AT2G33860 | ETT, ARF3; ETT (ETTIN); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0009733|response to auxin stimulus;GO:0003700|transcription factor activity;GO:0010158|abaxial cell fate specification;GO:0010050|vegetative phase change;GO:0009850|auxin metabolic process;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA793:rna-TAV2_LOCUS5872,rna-TAV2_LOCUS7430 | AT1G61130 | SCPL32; SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32); serine-type carboxypeptidase | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA795:rna-TAV2_LOCUS5916,rna-TAV2_LOCUS5917 | AT5G48640||AT5G48630 | cyclin family protein | GO:0004693|cyclin-dependent protein kinase activity;GO:0005575|cellular_component;GO:0051726|regulation of cell cycle | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA796:rna-TAV2_LOCUS5938,rna-TAV2_LOCUS5932 | AT5G62360||AT5G62350 | invertase/pectin methylesterase inhibitor family protein||invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22) | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0005575|cellular_component;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA797:rna-TAV2_LOCUS5973,rna-TAV2_LOCUS6325 | AT4G11170 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0005515|protein binding;GO:0010193|response to ozone;GO:0005524|ATP binding;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response;GO:0005739|mitochondrion | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA798:rna-TAV2_LOCUS6001,rna-TAV2_LOCUS6000 | AT5G08640||AT5G63590 | FLS; FLS (FLAVONOL SYNTHASE); flavonol synthase||FLS3; FLS3 (FLAVONOL SYNTHASE 3); flavonol synthase | GO:0045431|flavonol synthase activity;GO:0009813|flavonoid biosynthetic process;GO:0009416|response to light stimulus;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA799:rna-TAV2_LOCUS6037,rna-TAV2_LOCUS6038 | AT5G45150 | RTL3; RTL3 (RNase three-like protein 3); RNA binding / double-stranded RNA binding / ribonuclease III | GO:0006396|RNA processing;GO:0004525|ribonuclease III activity;GO:0003723|RNA binding;GO:0003725|double-stranded RNA binding;GO:0005622|intracellular | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA803:rna-TAV2_LOCUS6092,rna-TAV2_LOCUS6093 | AT5G44790 | RAN1, HMA7; RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | GO:0005375|copper ion transmembrane transporter activity;GO:0009723|response to ethylene stimulus;GO:0010119|regulation of stomatal movement;GO:0015662|ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0009873|ethylene mediated signaling pathway;GO:0005794|Golgi apparatus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA805:rna-TAV2_LOCUS6232,rna-TAV2_LOCUS6229 | AT1G64260||AT1G49920 | zinc finger protein-related | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0008270|zinc ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA806:rna-TAV2_LOCUS6252,rna-TAV2_LOCUS5808 | AT5G47670||AT5G47640 | NF-YB2; NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2); transcription factor||NF-YB6; NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6); transcription activator/ transcription activator binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0003700|transcription factor activity;GO:0005622|intracellular;GO:0045449|regulation of transcription;GO:0043193|positive regulation of gene-specific transcription;GO:0005634|nucleus;GO:0016563|transcription activator activity;GO:0033613|transcription activator binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA807:rna-TAV2_LOCUS6284,rna-TAV2_LOCUS7286 | AT1G64030||AT2G14540 | serpin family protein / serine protease inhibitor family protein | GO:0004867|serine-type endopeptidase inhibitor activity;GO:0005829|cytosol;GO:0006281|DNA repair;GO:0006974|response to DNA damage stimulus;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA808:rna-TAV2_LOCUS6287,rna-TAV2_LOCUS6288 | AT5G63140 | ATPAP29, PAP29; ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29); acid phosphatase/ protein serine/threonine phosphatase | GO:0012505|endomembrane system;GO:0003993|acid phosphatase activity;GO:0004722|protein serine/threonine phosphatase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA809:rna-TAV2_LOCUS6307,rna-TAV2_LOCUS7030 | AT2G17600 | DC1 domain-containing protein | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA810:rna-TAV2_LOCUS6315,rna-TAV2_LOCUS6316 | AT1G63530||AT1G63540 | hydroxyproline-rich glycoprotein family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G63540.1); Has 9178 Blast hits to 3392 proteins in 331 species: Archae - 0; Bacteria - 1035; Metazoa - 3449; Fungi - 1835; Plants - 200; Viruses - 89; Other Eukaryotes - 2570 (source: NCBI BLink). | GO:0009860|pollen tube growth;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA811:rna-TAV2_LOCUS6319,rna-TAV2_LOCUS6320 | AT2G20142 | transmembrane receptor | GO:0007165|signal transduction;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0004888|transmembrane receptor activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA812:rna-TAV2_LOCUS6321,rna-TAV2_LOCUS6322 | AT1G63600 | protein kinase-related | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA814:rna-TAV2_LOCUS6346,rna-TAV2_LOCUS6520 | AT5G24220||AT5G24230 | LOCATED IN: cellular_component unknown; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: triacylglycerol lipase (TAIR:AT5G24200.1); Has 125 Blast hits to 125 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 7; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||lipase class 3-related | GO:0004806|triglyceride lipase activity;GO:0005575|cellular_component;GO:0006629|lipid metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA815:rna-TAV2_LOCUS6440,rna-TAV2_LOCUS6133 | AT1G58807 | disease resistance protein (CC-NBS-LRR class), putative / PRM1 homolog, putative | GO:0006952|defense response;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA816:rna-TAV2_LOCUS6470,rna-TAV2_LOCUS8095 | AT5G46130||AT5G46140 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA818:rna-TAV2_LOCUS6491,rna-TAV2_LOCUS6490 | AT3G06910 | ULP1A; ULP1A (UB-LIKE PROTEASE 1A); SUMO-specific protease/ cysteine-type peptidase | GO:0006508|proteolysis;GO:0005575|cellular_component;GO:0016926|protein desumoylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA819:rna-TAV2_LOCUS6551,rna-TAV2_LOCUS6552 | AT5G25754 | unknown protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA820:rna-TAV2_LOCUS6566,rna-TAV2_LOCUS6563 | AT2G02390 | ATGSTZ1, GST18; ATGSTZ1 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE ZETA 1); catalytic/ glutathione transferase | GO:0005737|cytoplasm;GO:0004364|glutathione transferase activity;GO:0009407|toxin catabolic process;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA821:rna-TAV2_LOCUS6573,rna-TAV2_LOCUS7180 | AT2G21850||AT2G21830 | DC1 domain-containing protein||protein binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0005575|cellular_component;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA824:rna-TAV2_LOCUS6626,rna-TAV2_LOCUS7539 | AT1G12663||AT1G12665 | Encodes a Plant thionin family protein||Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. | GO:0012505|endomembrane system;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA826:rna-TAV2_LOCUS6638,rna-TAV2_LOCUS5473 | AT1G62670||AT1G62914 | ||pentatricopeptide (PPR) repeat-containing protein | ;GO:0005739|mitochondrion;GO:0003723|RNA binding;GO:0000966|RNA 5'-end processing | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA827:rna-TAV2_LOCUS6686,rna-TAV2_LOCUS7903 | AT1G32763 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA828:rna-TAV2_LOCUS6698,rna-TAV2_LOCUS5306 | AT2G03980 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0004091|carboxylesterase activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA829:rna-TAV2_LOCUS6707,rna-TAV2_LOCUS6700 | AT1G13310 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 189 Blast hits to 189 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 49; Plants - 22; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA830:rna-TAV2_LOCUS6711,rna-TAV2_LOCUS6712 | AT1G60995 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA831:rna-TAV2_LOCUS6713,rna-TAV2_LOCUS6714 | AT1G61000 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT1G64330.1); Has 41010 Blast hits to 23184 proteins in 1264 species: Archae - 616; Bacteria - 3998; Metazoa - 20566; Fungi - 2893; Plants - 1316; Viruses - 149; Other Eukaryotes - 11472 (source: NCBI BLink). | GO:0005886|plasma membrane;GO:0003674|molecular_function;GO:0007067|mitosis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA832:rna-TAV2_LOCUS6753,rna-TAV2_LOCUS6751 | AT5G45240 | transmembrane receptor | GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0007165|signal transduction;GO:0004888|transmembrane receptor activity;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA834:rna-TAV2_LOCUS6816,rna-TAV2_LOCUS6815 | AT5G63810||AT5G63800 | MUM2, BGAL6; MUM2 (MUCILAGE-MODIFIED 2); beta-galactosidase||BGAL10; BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding | GO:0003824|catalytic activity;GO:0048354|mucilage biosynthetic process during seed coat development;GO:0009505|plant-type cell wall;GO:0048046|apoplast;GO:0005618|cell wall;GO:0009827|plant-type cell wall modification;GO:0004565|beta-galactosidase activity;GO:0043169|cation binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA835:rna-TAV2_LOCUS6842,rna-TAV2_LOCUS5676 | AT5G23010 | MAM1, IMS3; MAM1 (METHYLTHIOALKYLMALATE SYNTHASE 1); 2-isopropylmalate synthase/ methylthioalkylmalate synthase | GO:0009507|chloroplast;GO:0010177|methylthioalkylmalate synthase activity;GO:0019761|glucosinolate biosynthetic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA836:rna-TAV2_LOCUS6849,rna-TAV2_LOCUS6850 | AT5G60900 | RLK1; RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1); ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding | GO:0005529|sugar binding;GO:0016301|kinase activity;GO:0005524|ATP binding;GO:0030246|carbohydrate binding;GO:0012505|endomembrane system;GO:0004713|protein tyrosine kinase activity;GO:0006468|protein amino acid phosphorylation;GO:0004674|protein serine/threonine kinase activity;GO:0004672|protein kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA838:rna-TAV2_LOCUS6870,rna-TAV2_LOCUS6867 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA839:rna-TAV2_LOCUS6871,rna-TAV2_LOCUS6868 | AT5G35190 | proline-rich extensin-like family protein | GO:0012505|endomembrane system;GO:0005199|structural constituent of cell wall;GO:0009664|plant-type cell wall organization | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA840:rna-TAV2_LOCUS6885,rna-TAV2_LOCUS6892 | AT5G44720 | molybdenum cofactor sulfurase family protein | GO:0003824|catalytic activity;GO:0030170|pyridoxal phosphate binding;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0008265|Mo-molybdopterin cofactor sulfurase activity;GO:0030151|molybdenum ion binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA841:rna-TAV2_LOCUS6889,rna-TAV2_LOCUS6887 | AT1G57820 | VIM1, ORTH2; VIM1 (VARIANT IN METHYLATION 1); DNA binding / chromatin binding / double-stranded methylated DNA binding / histone binding / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / ubiquitin-protein ligase | GO:0006325|chromatin organization;GO:0016567|protein ubiquitination;GO:0008327|methyl-CpG binding;GO:0003682|chromatin binding;GO:0006355|regulation of transcription, DNA-dependent;GO:0010385|double-stranded methylated DNA binding;GO:0004842|ubiquitin-protein ligase activity;GO:0042393|histone binding;GO:0010429|methyl-CpNpN binding;GO:0032776|DNA methylation on cytosine;GO:0010428|methyl-CpNpG binding;GO:0051301|cell division;GO:0010369|chromocenter;GO:0031508|centromeric heterochromatin formation;GO:0005634|nucleus;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA842:rna-TAV2_LOCUS6893,rna-TAV2_LOCUS6896 | AT5G65030 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA843:rna-TAV2_LOCUS6918,rna-TAV2_LOCUS6917 | AT5G25950 | unknown protein | GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA847:rna-TAV2_LOCUS6964,rna-TAV2_LOCUS7314 | AT5G45610 | unknown protein | GO:0007050|cell cycle arrest;GO:0005575|cellular_component;GO:0046983|protein dimerization activity;GO:0006974|response to DNA damage stimulus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA849:rna-TAV2_LOCUS6995,rna-TAV2_LOCUS6996 | AT1G62770||AT1G62760 | invertase/pectin methylesterase inhibitor family protein | GO:0046910|pectinesterase inhibitor activity;GO:0004857|enzyme inhibitor activity;GO:0012505|endomembrane system;GO:0030599|pectinesterase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA851:rna-TAV2_LOCUS7037,rna-TAV2_LOCUS7036 | AT1G60530 | dynamin family protein | GO:0005525|GTP binding;GO:0005575|cellular_component;GO:0003924|GTPase activity;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA852:rna-TAV2_LOCUS7043,rna-TAV2_LOCUS6154 | AT5G65950 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA853:rna-TAV2_LOCUS7094,rna-TAV2_LOCUS7561 | AT5G24280 | EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: DMS3 (DEFECTIVE IN MERISTEM SILENCING 3) (TAIR:AT3G49250.1); Has 61 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 8; Fungi - 2; Plants - 46; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA854:rna-TAV2_LOCUS7105,rna-TAV2_LOCUS7106 | AT5G47490||AT5G47480 | unknown protein | GO:0003674|molecular_function;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA856:rna-TAV2_LOCUS7120,rna-TAV2_LOCUS7122 | AT3G29635 | transferase family protein | GO:0016747|transferase activity, transferring acyl groups other than amino-acyl groups | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA857:rna-TAV2_LOCUS7139,rna-TAV2_LOCUS7138 | AT5G62270 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 48 Blast hits to 48 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA859:rna-TAV2_LOCUS7147,rna-TAV2_LOCUS7148 | AT3G27830 | RPL12-A, RPL12; RPL12-A (RIBOSOMAL PROTEIN L12-A); structural constituent of ribosome | GO:0006412|translation;GO:0009535|chloroplast thylakoid membrane;GO:0015934|large ribosomal subunit;GO:0000311|plastid large ribosomal subunit;GO:0003735|structural constituent of ribosome;GO:0009570|chloroplast stroma;GO:0009579|thylakoid;GO:0009507|chloroplast;GO:0009295|nucleoid | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA861:rna-TAV2_LOCUS7176,rna-TAV2_LOCUS7178 | AT3G08840 | D-alanine--D-alanine ligase family | GO:0005524|ATP binding;GO:0009507|chloroplast;GO:0008716|D-alanine-D-alanine ligase activity;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA862:rna-TAV2_LOCUS7199,rna-TAV2_LOCUS5387 | AT3G28330||AT3G28223 | F-box family protein-related||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box family protein-related (TAIR:AT3G28330.1); Has 107 Blast hits to 106 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA863:rna-TAV2_LOCUS7209,rna-TAV2_LOCUS7208 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA864:rna-TAV2_LOCUS7256,rna-TAV2_LOCUS7252 | AT5G49480 | ATCP1; ATCP1 (Ca2+-binding protein 1); calcium ion binding | GO:0042538|hyperosmotic salinity response;GO:0005509|calcium ion binding;GO:0005829|cytosol | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA866:rna-TAV2_LOCUS7291,rna-TAV2_LOCUS7292 | AT5G57870 | eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | GO:0016070|RNA metabolic process;GO:0006413|translational initiation;GO:0005488|binding;GO:0003743|translation initiation factor activity;GO:0006412|translation;GO:0003723|RNA binding;GO:0005515|protein binding;GO:0005737|cytoplasm;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA867:rna-TAV2_LOCUS7309,rna-TAV2_LOCUS7304 | AT5G26650||AT5G26630 | MADS-box protein (AGL35)||AGL36; AGL36 (AGAMOUS-LIKE 36); DNA binding / transcription factor | GO:0006355|regulation of transcription, DNA-dependent;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA870:rna-TAV2_LOCUS7423,rna-TAV2_LOCUS7422 | AT2G03590||AT2G03520 | ATUPS4; ATUPS4 (Arabidopsis thaliana ureide permease 4)||ATUPS1; ATUPS1 (ARABIDOPSIS THALIANA UREIDE PERMEASE 1); allantoin uptake transmembrane transporter | GO:0015720|allantoin transport;GO:0005274|allantoin uptake transmembrane transporter activity;GO:0012505|endomembrane system;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA871:rna-TAV2_LOCUS7427,rna-TAV2_LOCUS5871 | AT1G61120 | TPS04, GES; TPS04 (TERPENE SYNTHASE 04); (E,E)-geranyllinalool synthase | GO:0000304|response to singlet oxygen;GO:0016102|diterpenoid biosynthetic process;GO:0009611|response to wounding;GO:0009753|response to jasmonic acid stimulus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA872:rna-TAV2_LOCUS7492,rna-TAV2_LOCUS7487 | AT5G44850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G05080.1); Has 469 Blast hits to 454 proteins in 19 species: Archae - 0; Bacteria - 2; Metazoa - 80; Fungi - 0; Plants - 386; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA873:rna-TAV2_LOCUS7515,rna-TAV2_LOCUS7517 | AT5G46610||AT5G46600 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA874:rna-TAV2_LOCUS7532,rna-TAV2_LOCUS7533 | AT1G58110 | bZIP family transcription factor | GO:0043565|sequence-specific DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA876:rna-TAV2_LOCUS7551,rna-TAV2_LOCUS7553 | AT5G64000||AT5G63980 | SAL1, ALX8, ATSAL1, HOS2, FRY1; SAL1; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase||SAL2, ATSAL2; SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase | GO:0009507|chloroplast;GO:0004437|inositol or phosphatidylinositol phosphatase activity;GO:0051512|positive regulation of unidimensional cell growth;GO:0009738|abscisic acid mediated signaling pathway;GO:0005737|cytoplasm;GO:0006401|RNA catabolic process;GO:0006790|sulfur metabolic process;GO:0009416|response to light stimulus;GO:0009628|response to abiotic stimulus;GO:0009570|chloroplast stroma;GO:0009414|response to water deprivation;GO:0005634|nucleus;GO:0048573|photoperiodism, flowering;GO:0043157|response to cation stress;GO:0016481|negative regulation of transcription;GO:0009409|response to cold;GO:0009968|negative regulation of signal transduction;GO:0008441|3'(2'),5'-bisphosphate nucleotidase activity;GO:0005575|cellular_component;GO:0019204|nucleotide phosphatase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA878:rna-TAV2_LOCUS7574,rna-TAV2_LOCUS7575 | AT1G56300 | DNAJ heat shock N-terminal domain-containing protein | GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA879:rna-TAV2_LOCUS7585,rna-TAV2_LOCUS5282 | AT5G01120||AT5G01150 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA880:rna-TAV2_LOCUS7592,rna-TAV2_LOCUS5589 | AT3G28940||AT3G28930 | AIG2; AIG2 (AVRRPT2-INDUCED GENE 2)||avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putative | GO:0003674|molecular_function;GO:0005886|plasma membrane;GO:0009617|response to bacterium;GO:0005575|cellular_component;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA882:rna-TAV2_LOCUS7624,rna-TAV2_LOCUS6974 | AT1G56660 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA883:rna-TAV2_LOCUS7629,rna-TAV2_LOCUS7632 | AT5G28610 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, hypocotyl, root, seed, leaf; EXPRESSED DURING: E expanded cotyledon stage, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT5G28630.1); Has 1909 Blast hits to 1356 proteins in 121 species: Archae - 0; Bacteria - 8; Metazoa - 1295; Fungi - 112; Plants - 60; Viruses - 39; Other Eukaryotes - 395 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA884:rna-TAV2_LOCUS7659,rna-TAV2_LOCUS7662 | AT5G63030 | glutaredoxin, putative | GO:0008794|arsenate reductase (glutaredoxin) activity;GO:0015035|protein disulfide oxidoreductase activity;GO:0045454|cell redox homeostasis;GO:0005575|cellular_component;GO:0006499|N-terminal protein myristoylation;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA885:rna-TAV2_LOCUS7677,rna-TAV2_LOCUS6487 | AT1G54520 | unknown protein | GO:0009507|chloroplast;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA886:rna-TAV2_LOCUS7683,rna-TAV2_LOCUS7684 | AT1G65630 | DegP3; DegP3 (DegP protease 3); catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase | GO:0004252|serine-type endopeptidase activity;GO:0005515|protein binding;GO:0005739|mitochondrion;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA887:rna-TAV2_LOCUS7703,rna-TAV2_LOCUS7702 | AT2G41730 | unknown protein | GO:0009061|anaerobic respiration;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA888:rna-TAV2_LOCUS7727,rna-TAV2_LOCUS7730 | AT1G64030 | serpin family protein / serine protease inhibitor family protein | GO:0004867|serine-type endopeptidase inhibitor activity;GO:0006281|DNA repair;GO:0005829|cytosol;GO:0006974|response to DNA damage stimulus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA889:rna-TAV2_LOCUS7752,rna-TAV2_LOCUS5742 | AT2G02140||AT2G02100 | LCR72, PDF2.6; LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72); peptidase inhibitor||LCR69, PDF2.2; LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase inhibitor | GO:0030414|peptidase inhibitor activity;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA890:rna-TAV2_LOCUS7807,rna-TAV2_LOCUS7809 | AT1G58025 | DNA binding | GO:0005575|cellular_component;GO:0008150|biological_process;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA893:rna-TAV2_LOCUS7815,rna-TAV2_LOCUS7811 | AT1G58050 | helicase domain-containing protein | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0005524|ATP binding;GO:0008150|biological_process;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA894:rna-TAV2_LOCUS7816,rna-TAV2_LOCUS6629 | AT1G58050||AT1G58060 | helicase domain-containing protein | GO:0004386|helicase activity;GO:0003676|nucleic acid binding;GO:0005524|ATP binding;GO:0008150|biological_process;GO:0009507|chloroplast | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA895:rna-TAV2_LOCUS7818,rna-TAV2_LOCUS7819 | AT5G61560||AT5G61550 | protein kinase family protein | GO:0016567|protein ubiquitination;GO:0016301|kinase activity;GO:0004674|protein serine/threonine kinase activity;GO:0004842|ubiquitin-protein ligase activity;GO:0005524|ATP binding;GO:0005886|plasma membrane;GO:0000151|ubiquitin ligase complex;GO:0006468|protein amino acid phosphorylation;GO:0009507|chloroplast;GO:0004672|protein kinase activity;GO:0004713|protein tyrosine kinase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA896:rna-TAV2_LOCUS7834,rna-TAV2_LOCUS7828 | AT3G30842 | PDR10, ATPDR10; PDR10 (PLEIOTROPIC DRUG RESISTANCE 10); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding | GO:0017111|nucleoside-triphosphatase activity;GO:0016020|membrane;GO:0006855|drug transmembrane transport;GO:0016887|ATPase activity;GO:0005524|ATP binding;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA899:rna-TAV2_LOCUS7962,rna-TAV2_LOCUS7967 | AT1G28305||AT3G27331 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27329.1); Has 48 Blast hits to 48 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28306.1); Has 67 Blast hits to 67 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA900:rna-TAV2_LOCUS7966,rna-TAV2_LOCUS7964 | AT3G26840 | esterase/lipase/thioesterase family protein | GO:0008415|acyltransferase activity;GO:0010287|plastoglobule;GO:0008152|metabolic process;GO:0003824|catalytic activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA901:rna-TAV2_LOCUS7996,rna-TAV2_LOCUS7995 | AT5G45230||AT4G36140 | disease resistance protein (TIR-NBS-LRR class), putative | GO:0017111|nucleoside-triphosphatase activity;GO:0031224|intrinsic to membrane;GO:0045087|innate immune response;GO:0005515|protein binding;GO:0005524|ATP binding;GO:0007165|signal transduction;GO:0006915|apoptosis;GO:0004888|transmembrane receptor activity;GO:0000166|nucleotide binding;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA903:rna-TAV2_LOCUS8011,rna-TAV2_LOCUS7648 | AT1G70060||AT1G24190 | SNL4; SNL4 (SIN3-LIKE 4)||SIN3, ATSIN3, SNL3; SNL3 (SIN3-LIKE 3); transcription repressor | GO:0009737|response to abscisic acid stimulus;GO:0006355|regulation of transcription, DNA-dependent;GO:0016481|negative regulation of transcription;GO:0016564|transcription repressor activity;GO:0012505|endomembrane system;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA904:rna-TAV2_LOCUS8031,rna-TAV2_LOCUS5757 | AT5G16640||AT1G63150 | pentatricopeptide (PPR) repeat-containing protein | ;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA905:rna-TAV2_LOCUS8062,rna-TAV2_LOCUS7671 | AT5G60950||AT5G60920 | COBL5; COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)||COB; COB (COBRA) | GO:0010215|cellulose microfibril organization;GO:0003674|molecular_function;GO:0009825|multidimensional cell growth;GO:0046658|anchored to plasma membrane;GO:0009505|plant-type cell wall;GO:0005886|plasma membrane;GO:0012505|endomembrane system;GO:0031225|anchored to membrane;GO:0008150|biological_process;GO:0009897|external side of plasma membrane;GO:0009651|response to salt stress;GO:0009930|longitudinal side of cell surface | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA906:rna-TAV2_LOCUS8077,rna-TAV2_LOCUS8075 | AT1G61320||AT1G61330 | F-box family protein||FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G61330.1); Has 264 Blast hits to 264 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 264; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA908:rna-TAV2_LOCUS8114,rna-TAV2_LOCUS8118 | AT5G64960||AT1G69770 | CMT3; CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase||CDKC2, CDKC;2; CDKC2 (Cyclin dependent kinase group C 2); kinase | GO:0005829|cytosol;GO:0009615|response to virus;GO:0005874|microtubule;GO:0016604|nuclear body;GO:0006342|chromatin silencing;GO:0010425|DNA methylation on cytosine within a CNG sequence;GO:0010069|zygote asymmetric cytokinesis in the embryo sac;GO:0016301|kinase activity;GO:0050792|regulation of viral reproduction;GO:0048366|leaf development;GO:0003886|DNA (cytosine-5-)-methyltransferase activity;GO:0006397|mRNA processing;GO:0005634|nucleus;GO:0048440|carpel development;GO:0006306|DNA methylation;GO:0009908|flower development;GO:0005681|spliceosomal complex;GO:0000785|chromatin;GO:0045814|negative regulation of gene expression, epigenetic | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA909:rna-TAV2_LOCUS8122,rna-TAV2_LOCUS8124 | AT5G66710 | protein kinase, putative | GO:0005886|plasma membrane;GO:0004712|protein serine/threonine/tyrosine kinase activity;GO:0016301|kinase activity;GO:0006468|protein amino acid phosphorylation | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA910:rna-TAV2_LOCUS8126,rna-TAV2_LOCUS8129 | AT5G66620||AT5G17890 | DAR4; DAR4 (DA1-RELATED PROTEIN 4); ATP binding / protein binding / zinc ion binding||DAR6; DAR6 (DA1-RELATED PROTEIN 6); zinc ion binding | GO:0005515|protein binding;GO:0008270|zinc ion binding;GO:0005524|ATP binding;GO:0006915|apoptosis;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA912:rna-TAV2_LOCUS8158,rna-TAV2_LOCUS8155 | AT5G65930 | ZWI, PKCBP, KCBP; ZWI (ZWICHEL); calmodulin binding / microtubule motor | GO:0005516|calmodulin binding;GO:0010091|trichome branching;GO:0003777|microtubule motor activity;GO:0009846|pollen germination;GO:0005886|plasma membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA913:rna-TAV2_LOCUS8159,rna-TAV2_LOCUS8161 | AT1G01350 | nucleic acid binding / protein binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0005515|protein binding;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA914:rna-TAV2_LOCUS8162,rna-TAV2_LOCUS8156 | AT5G65970 | MLO10, ATMLO10; MLO10 (MILDEW RESISTANCE LOCUS O 10); calmodulin binding | GO:0016021|integral to membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA916:rna-TAV2_LOCUS10018,rna-TAV2_LOCUS10017 | AT1G53990||AT3G14225 | GLIP4; GLIP4; carboxylesterase/ lipase||GLIP3; GLIP3; carboxylesterase/ lipase | GO:0006114|glycerol biosynthetic process;GO:0004091|carboxylesterase activity;GO:0012505|endomembrane system;GO:0016298|lipase activity;GO:0006629|lipid metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA917:rna-TAV2_LOCUS10021,rna-TAV2_LOCUS10020 | AT3G14250 | protein binding / zinc ion binding | GO:0008270|zinc ion binding;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA918:rna-TAV2_LOCUS10061,rna-TAV2_LOCUS10066 | AT3G23950 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA919:rna-TAV2_LOCUS10087,rna-TAV2_LOCUS10088 | AT3G08947 | binding / protein transporter | GO:0005488|binding;GO:0000059|protein import into nucleus, docking;GO:0006886|intracellular protein transport;GO:0005643|nuclear pore;GO:0005737|cytoplasm;GO:0005634|nucleus;GO:0008565|protein transporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA921:rna-TAV2_LOCUS10117,rna-TAV2_LOCUS11213 | AT3G24880 | DNA binding | GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA922:rna-TAV2_LOCUS10125,rna-TAV2_LOCUS10126 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA925:rna-TAV2_LOCUS10144,rna-TAV2_LOCUS10146 | AT3G22330||AT3G22310 | PMH2; PMH2 (putative mitochondrial RNA helicase 2); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding||PMH1, ATRH9; PMH1 (PUTATIVE MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding / RNA binding | GO:0004386|helicase activity;GO:0000373|Group II intron splicing;GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005730|nucleolus;GO:0005524|ATP binding;GO:0009651|response to salt stress;GO:0005618|cell wall;GO:0009409|response to cold;GO:0009414|response to water deprivation;GO:0043234|protein complex;GO:0005739|mitochondrion;GO:0008026|ATP-dependent helicase activity;GO:0003677|DNA binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA926:rna-TAV2_LOCUS10148,rna-TAV2_LOCUS10522 | AT3G13790||AT3G13784 | AtcwINV5; AtcwINV5 (Arabidopsis thaliana cell wall invertase 5); hydrolase, hydrolyzing O-glycosyl compounds||ATCWINV1, ATBFRUCT1; ATBFRUCT1; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds | GO:0019575|sucrose catabolic process, using beta-fructofuranosidase;GO:0004564|beta-fructofuranosidase activity;GO:0005618|cell wall;GO:0012505|endomembrane system;GO:0004553|hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005975|carbohydrate metabolic process;GO:0009611|response to wounding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA927:rna-TAV2_LOCUS10162,rna-TAV2_LOCUS10163 | AT5G17200||AT3G15720 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | GO:0046658|anchored to plasma membrane;GO:0010583|response to cyclopentenone;GO:0009505|plant-type cell wall;GO:0012505|endomembrane system;GO:0031225|anchored to membrane;GO:0005975|carbohydrate metabolic process;GO:0004650|polygalacturonase activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA928:rna-TAV2_LOCUS10174,rna-TAV2_LOCUS10173 | AT3G01670||AT3G01680 | unknown protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA929:rna-TAV2_LOCUS10206,rna-TAV2_LOCUS10207 | AT3G11530 | vacuolar protein sorting 55 family protein / VPS55 family protein | GO:0005773|vacuole;GO:0005215|transporter activity;GO:0006810|transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA931:rna-TAV2_LOCUS10234,rna-TAV2_LOCUS10233 | AT2G20720||AT2G20710 | pentatricopeptide (PPR) repeat-containing protein | GO:0005739|mitochondrion;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA932:rna-TAV2_LOCUS10242,rna-TAV2_LOCUS10245 | AT2G20380||AT5G38670 | F-box family protein||kelch repeat-containing F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA934:rna-TAV2_LOCUS10364,rna-TAV2_LOCUS10363 | AT3G10500||AT3G10490 | anac051; anac052 (Arabidopsis NAC domain containing protein 52); transcription factor||anac053; anac053 (Arabidopsis NAC domain containing protein 53); transcription factor | GO:0005730|nucleolus;GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0009555|pollen development;GO:0007275|multicellular organismal development;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA936:rna-TAV2_LOCUS10376,rna-TAV2_LOCUS10388 | AT3G05720 | IMPA-7; IMPA-7 (IMPORTIN ALPHA ISOFORM 7); binding / protein transporter | GO:0006606|protein import into nucleus;GO:0005488|binding;GO:0006886|intracellular protein transport;GO:0005643|nuclear pore;GO:0005737|cytoplasm;GO:0005634|nucleus;GO:0008565|protein transporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA937:rna-TAV2_LOCUS10407,rna-TAV2_LOCUS10408 | AT2G18510 | emb2444; emb2444 (embryo defective 2444); RNA binding / nucleic acid binding / nucleotide binding | GO:0003723|RNA binding;GO:0003676|nucleic acid binding;GO:0005730|nucleolus;GO:0009793|embryonic development ending in seed dormancy;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA939:rna-TAV2_LOCUS10481,rna-TAV2_LOCUS10483 | AT2G12400 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA940:rna-TAV2_LOCUS10501,rna-TAV2_LOCUS10499 | AT2G16120 | mannitol transporter, putative | GO:0016020|membrane;GO:0015749|monosaccharide transport;GO:0005886|plasma membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0005351|sugar:hydrogen symporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA942:rna-TAV2_LOCUS10527,rna-TAV2_LOCUS10528 | AT3G13720||AT3G13700 | RNA-binding protein, putative||PRA1.F3, PRA8; PRA8 | GO:0003723|RNA binding;GO:0003674|molecular_function;GO:0003676|nucleic acid binding;GO:0016192|vesicle-mediated transport;GO:0005575|cellular_component;GO:0008150|biological_process;GO:0005783|endoplasmic reticulum;GO:0000166|nucleotide binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA943:rna-TAV2_LOCUS10539,rna-TAV2_LOCUS10542 | AT3G15510||AT3G15500 | ATNAC3, ANAC055; ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55); transcription factor||ATNAC2, ANAC056, NARS1; ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2); transcription factor | GO:0003700|transcription factor activity;GO:0045449|regulation of transcription;GO:0007275|multicellular organismal development;GO:0009414|response to water deprivation;GO:0005575|cellular_component;GO:0009867|jasmonic acid mediated signaling pathway | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA944:rna-TAV2_LOCUS10555,rna-TAV2_LOCUS10556 | AT3G09530||AT3G09520 | ATEXO70H3; ATEXO70H3 (exocyst subunit EXO70 family protein H3); protein binding||ATEXO70H4; ATEXO70H4 (exocyst subunit EXO70 family protein H4); protein binding | GO:0006904|vesicle docking during exocytosis;GO:0006887|exocytosis;GO:0005515|protein binding;GO:0000145|exocyst | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA945:rna-TAV2_LOCUS10593,rna-TAV2_LOCUS11442 | AT3G18720 | F-box family protein | GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA947:rna-TAV2_LOCUS10683,rna-TAV2_LOCUS10684 | AT3G04280 | ARR22; ARR22 (ARABIDOPSIS RESPONSE REGULATOR 22); phosphohistidine phosphatase/ transcription regulator/ two-component response regulator | GO:0000156|two-component response regulator activity;GO:0030528|transcription regulator activity;GO:0005737|cytoplasm;GO:0000160|two-component signal transduction system (phosphorelay);GO:0008969|phosphohistidine phosphatase activity;GO:0005634|nucleus;GO:0009736|cytokinin mediated signaling pathway | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA948:rna-TAV2_LOCUS10748,rna-TAV2_LOCUS10747 | AT2G19050||AT2G19010 | GDSL-motif lipase/hydrolase family protein | GO:0016788|hydrolase activity, acting on ester bonds;GO:0016298|lipase activity;GO:0006629|lipid metabolic process;GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA949:rna-TAV2_LOCUS10802,rna-TAV2_LOCUS9714 | AT2G47850 | zinc finger (CCCH-type) family protein | GO:0008270|zinc ion binding;GO:0008150|biological_process;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA950:rna-TAV2_LOCUS10803,rna-TAV2_LOCUS9713 | AT1G51538||AT5G07930 | MCT2; MCT2 (mei2 C-Terminal RRM only like 2); nucleic acid binding||unknown protein | GO:0003676|nucleic acid binding;GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA951:rna-TAV2_LOCUS10841,rna-TAV2_LOCUS9368 | AT3G13300 | VCS; VCS (VARICOSE); nucleotide binding / protein homodimerization | GO:0042803|protein homodimerization activity;GO:0031087|deadenylation-independent decapping of nuclear-transcribed mRNA;GO:0005829|cytosol;GO:0006402|mRNA catabolic process;GO:0009965|leaf morphogenesis;GO:0000166|nucleotide binding;GO:0005634|nucleus;GO:0000932|cytoplasmic mRNA processing body | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA952:rna-TAV2_LOCUS10886,rna-TAV2_LOCUS10887 | AT2G15325 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA954:rna-TAV2_LOCUS10916,rna-TAV2_LOCUS9588 | AT3G20600 | NDR1; NDR1 (non race-specific disease resistance 1); signal transducer | GO:0009626|plant-type hypersensitive response;GO:0016020|membrane;GO:0005886|plasma membrane;GO:0004871|signal transducer activity;GO:0009816|defense response to bacterium, incompatible interaction;GO:0009817|defense response to fungus, incompatible interaction;GO:0006952|defense response | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA956:rna-TAV2_LOCUS10947,rna-TAV2_LOCUS10946 | AT3G04980||AT3G04950 | DNAJ heat shock N-terminal domain-containing protein||unknown protein | ;GO:0051082|unfolded protein binding;GO:0006457|protein folding;GO:0005575|cellular_component;GO:0031072|heat shock protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA958:rna-TAV2_LOCUS11038,rna-TAV2_LOCUS11037 | AT3G05730||AT3G05727 | Encodes a defensin-like (DEFL) family protein. | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA959:rna-TAV2_LOCUS11056,rna-TAV2_LOCUS11057 | AT3G12660 | FLA14; FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR) | GO:0031225|anchored to membrane;GO:0003674|molecular_function | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA960:rna-TAV2_LOCUS11070,rna-TAV2_LOCUS11067 | AT3G25500 | AFH1, FH1, AHF1, ATFH1; AFH1 (FORMIN HOMOLOGY 1); actin binding / actin filament binding / protein binding | GO:0005515|protein binding;GO:0016020|membrane;GO:0003779|actin binding;GO:0005886|plasma membrane;GO:0030036|actin cytoskeleton organization;GO:0051015|actin filament binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA961:rna-TAV2_LOCUS11080,rna-TAV2_LOCUS10778 | AT4G11580 | F-box family protein | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA962:rna-TAV2_LOCUS11101,rna-TAV2_LOCUS10810 | AT2G15690 | pentatricopeptide (PPR) repeat-containing protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA963:rna-TAV2_LOCUS11115,rna-TAV2_LOCUS11122 | AT3G21460 | electron carrier/ protein disulfide oxidoreductase | GO:0015035|protein disulfide oxidoreductase activity;GO:0045454|cell redox homeostasis;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA964:rna-TAV2_LOCUS11125,rna-TAV2_LOCUS11126 | AT3G17700||AT3G17690 | ATCNGC19, CNGC19; ATCNGC19; calmodulin binding / cyclic nucleotide binding / ion channel||CNBT1, CNGC20, ATCNGC20; CNBT1 (CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1); calmodulin binding / cyclic nucleotide binding / ion channel | GO:0005516|calmodulin binding;GO:0016020|membrane;GO:0005216|ion channel activity;GO:0009624|response to nematode;GO:0030551|cyclic nucleotide binding;GO:0009507|chloroplast;GO:0006811|ion transport | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA966:rna-TAV2_LOCUS11157,rna-TAV2_LOCUS11158 | AT3G14320 | zinc finger (C3HC4-type RING finger) family protein | GO:0008270|zinc ion binding;GO:0012505|endomembrane system;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA968:rna-TAV2_LOCUS11180,rna-TAV2_LOCUS11185 | AT2G14720||AT2G14740 | VSR-2; VSR-2; calcium ion binding||ATVSR3; ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding | GO:0005773|vacuole;GO:0005509|calcium ion binding;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA969:rna-TAV2_LOCUS11199,rna-TAV2_LOCUS11196 | AT3G25420 | scpl21; scpl21 (serine carboxypeptidase-like 21); serine-type carboxypeptidase | GO:0012505|endomembrane system;GO:0006508|proteolysis | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA970:rna-TAV2_LOCUS11206,rna-TAV2_LOCUS11205 | AT2G16790 | shikimate kinase family protein | GO:0016301|kinase activity;GO:0004765|shikimate kinase activity;GO:0005524|ATP binding;GO:0005575|cellular_component;GO:0005975|carbohydrate metabolic process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA972:rna-TAV2_LOCUS11227,rna-TAV2_LOCUS11223 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA973:rna-TAV2_LOCUS11235,rna-TAV2_LOCUS11236 | AT3G19010||AT3G19000 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | GO:0045431|flavonol synthase activity;GO:0016491|oxidoreductase activity;GO:0005506|iron ion binding;GO:0016706|oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0009813|flavonoid biosynthetic process;GO:0005575|cellular_component;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA976:rna-TAV2_LOCUS11309,rna-TAV2_LOCUS9373 | AT1G03660 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: ankyrin repeat family protein (TAIR:AT1G03670.1); Has 53 Blast hits to 53 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA980:rna-TAV2_LOCUS11431,rna-TAV2_LOCUS11432 | AT3G05450 | LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05685.1); Has 30905 Blast hits to 2528 proteins in 227 species: Archae - 0; Bacteria - 28079; Metazoa - 916; Fungi - 505; Plants - 127; Viruses - 92; Other Eukaryotes - 1186 (source: NCBI BLink). | GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA981:rna-TAV2_LOCUS11469,rna-TAV2_LOCUS11468 | AT3G10570||AT3G10560 | UNE9, CYP77A7; UNE9 (UNFERTILIZED EMBRYO SAC 9); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding||CYP77A6; CYP77A6; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | GO:0009567|double fertilization forming a zygote and endosperm;GO:0010143|cutin biosynthetic process;GO:0009908|flower development;GO:0005506|iron ion binding;GO:0004497|monooxygenase activity;GO:0012505|endomembrane system;GO:0048868|pollen tube development;GO:0019825|oxygen binding;GO:0020037|heme binding;GO:0005739|mitochondrion;GO:0009055|electron carrier activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA982:rna-TAV2_LOCUS11479,rna-TAV2_LOCUS11478 | AT3G03730 | F-box family protein | GO:0005575|cellular_component;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA983:rna-TAV2_LOCUS11505,rna-TAV2_LOCUS11504 | AT3G18310 | unknown protein | GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA985:rna-TAV2_LOCUS11533,rna-TAV2_LOCUS10398 | AT3G01230||AT3G01240 | unknown protein | GO:0012505|endomembrane system;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA986:rna-TAV2_LOCUS11539,rna-TAV2_LOCUS11542 | AT1G62310 | transcription factor jumonji (jmjC) domain-containing protein | GO:0008270|zinc ion binding;GO:0003700|transcription factor activity;GO:0005515|protein binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA987:rna-TAV2_LOCUS11546,rna-TAV2_LOCUS11543 | AT2G14610 | PR1, PR 1, ATPR1; PR1 (PATHOGENESIS-RELATED GENE 1) | GO:0005576|extracellular region;GO:0003674|molecular_function;GO:0005618|cell wall;GO:0009753|response to jasmonic acid stimulus;GO:0006952|defense response;GO:0009627|systemic acquired resistance;GO:0010266|response to vitamin B1 | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA989:rna-TAV2_LOCUS11593,rna-TAV2_LOCUS11592 | AT1G71770||AT1G49760 | PAB8, PABP8; PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor||PAB5; PAB5 (POLY(A)-BINDING PROTEIN 5); RNA binding / poly(A) binding / translation initiation factor | GO:0006413|translational initiation;GO:0003743|translation initiation factor activity;GO:0003723|RNA binding;GO:0005829|cytosol;GO:0000289|nuclear-transcribed mRNA poly(A) tail shortening;GO:0046686|response to cadmium ion;GO:0008143|poly(A) RNA binding;GO:0005634|nucleus | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA990:rna-TAV2_LOCUS11629,rna-TAV2_LOCUS11631 | AT3G24605||AT3G24600 | ||INVOLVED IN: antigen processing and presentation; LOCATED IN: MHC class I protein complex, membrane; CONTAINS InterPro DOMAIN/s: MHC class I, alpha chain, C-terminal (InterPro:IPR010579), Harpin-induced 1 (InterPro:IPR010847); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35170.1); Has 181 Blast hits to 96 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 181; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ;GO:0042612|MHC class I protein complex;GO:0019882|antigen processing and presentation;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA991:rna-TAV2_LOCUS11666,rna-TAV2_LOCUS11667 | AT3G20460 | sugar transporter, putative | GO:0016020|membrane;GO:0015144|carbohydrate transmembrane transporter activity;GO:0016021|integral to membrane;GO:0006810|transport;GO:0055085|transmembrane transport;GO:0005351|sugar:hydrogen symporter activity | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA992:rna-TAV2_LOCUS11682,rna-TAV2_LOCUS10767 | AT3G12410 | 3'-5' exonuclease/ nucleic acid binding | GO:0006139|nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;GO:0008408|3'-5' exonuclease activity;GO:0005622|intracellular;GO:0003676|nucleic acid binding | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA993:rna-TAV2_LOCUS11725,rna-TAV2_LOCUS10563 | AT4G15240 | fringe-related protein | GO:0016757|transferase activity, transferring glycosyl groups;GO:0005794|Golgi apparatus;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA994:rna-TAV2_LOCUS11727,rna-TAV2_LOCUS9473 | AT4G38740||AT3G22920 | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative||ROC1; ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | GO:0005829|cytosol;GO:0046686|response to cadmium ion;GO:0007165|signal transduction;GO:0005886|plasma membrane;GO:0048046|apoplast;GO:0006457|protein folding;GO:0003755|peptidyl-prolyl cis-trans isomerase activity;GO:0005575|cellular_component | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA995:rna-TAV2_LOCUS11730,rna-TAV2_LOCUS11731 | AT1G64810 | APO1; APO1 (ACCUMULATION OF PHOTOSYSTEM ONE 1) | GO:0012505|endomembrane system | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA997:rna-TAV2_LOCUS11773,rna-TAV2_LOCUS11770 | AT5G23820 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein | GO:0005773|vacuole;GO:0003674|molecular_function;GO:0008150|biological_process | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA998:rna-TAV2_LOCUS11775,rna-TAV2_LOCUS11778 | - | - | - | - | 2 | 1 | Thlaspi arvense | Tarvense | |||
| TA999:rna-TAV2_LOCUS11814,rna-TAV2_LOCUS11817 | AT2G17010||AT2G17000 | mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein | GO:0008150|biological_process;GO:0003674|molecular_function;GO:0016020|membrane | - | 2 | 1 | Thlaspi arvense | Tarvense |